# terms

id: GO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA/DNA hybrid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA/RNA hybrid binding","synonyms":[{"name":"RNA/DNA hybrid binding","type":"exact"}],"termid":"GO:0071667"}


id: PBO:0085505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; nascent Rps3p is bound by specific chaperone Yar1p during translation; homologous to mammalian ribosomal protein S3 and bacterial S3","termid":"PBO:0085505"}


id: PATO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in the bearer by virtue of the bearer's ability to refract light.","definition_xrefs":["biology-online:biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractivity","termid":"PATO:0001372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refractile","termid":"PATO:0001423"}


id: GO:0019677
data:
  {"annotated_genes":["SJAG_00839","SJAG_06622","SJAG_03373","SJAG_02369","SJAG_02796","SJAG_01310","SJAG_06621","SJAG_03903","SJAG_04334","SJAG_03660","SJAG_00461","SJAG_03091","SJAG_00027","SJAG_03828","SJAG_04192","SJAG_02135","SJAG_02945","SJAG_02107","SJAG_00605","SJAG_04495","SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101640],"is_not":false,"summary":null,"term":"GO:0019677"},{"annotations":[101985,99929,102353,105455,105919,94561,105920,105923,105918,105452,91584,105457,105921,105454,105456,105917,112861,101983,105453,105922,91095,105451,101007,94840,100185,101984,102352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; catabolism may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"pyridine nucleotide catabolic process","termid":"GO:0019364"},{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NAD catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006737"],"synonyms":[{"name":"NAD degradation","type":"exact"},{"name":"NADH catabolic process","type":"exact"},{"name":"NADH catabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide catabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide catabolism","type":"exact"},{"name":"NAD (oxidized) catabolic process","type":"exact"},{"name":"NAD (oxidized) catabolism","type":"exact"},{"name":"NAD (reduced) catabolic process","type":"exact"},{"name":"NAD (reduced) catabolism","type":"exact"},{"name":"NAD breakdown","type":"exact"},{"name":"NAD catabolism","type":"exact"},{"name":"oxidized NAD catabolic process","type":"exact"},{"name":"oxidized NAD catabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide catabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide catabolism","type":"exact"},{"name":"reduced NAD catabolic process","type":"exact"},{"name":"reduced NAD catabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide catabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide catabolism","type":"exact"}],"termid":"GO:0019677","terms_by_termid":{"GO:0019677":null,"GO:0061621":null}}


id: PR:O13326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met17 gene.","definition_xrefs":["UniProtKB:O13326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.11","synonyms":[{"name":"O-acetylhomoserine sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OAH sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-met17","type":"exact"},{"name":"homocysteine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13326"}


id: FYPO:0000561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G1 phase progression","synonyms":[{"name":"mitotic cell cycle progression in G1 phase: normal","type":"related"},{"name":"normal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression in G1","type":"exact"}],"termid":"FYPO:0000561"}


id: PBO:0045378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 3","termid":"PBO:0045378"}


id: SO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA_gene","termid":"SO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA_gene","synonyms":[{"name":"mitochondrial large subunit rRNA gene","type":"exact"},{"name":"rRNA 21S gene","type":"exact"},{"name":"rRNA_21S_gene","type":"exact"}],"termid":"SO:0002364"}


id: PBO:0060241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein H","termid":"PBO:0060241"}


id: PBO:0002748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn502","termid":"PBO:0002748"}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: GO:0034697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin I","synonyms":[{"name":"response to prostaglandin I stimulus","type":"exact"}],"termid":"GO:0034697"}


id: PBO:0030992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning","termid":"PBO:0030992"}


id: GO:1904450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GOC:TermGenie","PMID:2342602","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"positively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of aspartate secretion","synonyms":[{"name":"activation of aspartate secretion","type":"narrow"},{"name":"up regulation of aspartate secretion","type":"exact"},{"name":"up-regulation of aspartate secretion","type":"exact"},{"name":"upregulation of aspartate secretion","type":"exact"}],"termid":"GO:1904450"}


id: PBO:0066556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 19","termid":"PBO:0066556"}


id: SO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_thiouridine","secondary_identifiers":["RNAMOD:058"],"synonyms":[{"name":"4-thiouridine","type":"exact"},{"name":"four thiouridine","type":"exact"},{"name":"s4U","type":"exact"}],"termid":"SO:0001350"}


id: GO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin 4.","definition_xrefs":["EC:2.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"precorrin-3B C17-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.131-RXN","RHEA:12761"],"synonyms":[{"name":"CobJ","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-3B C17-methyltransferase activity","type":"related"},{"name":"precorrin-3 methylase activity","type":"related"},{"name":"precorrin-3 methyltransferase activity","type":"related"}],"termid":"GO:0030789"}


id: PBO:0065609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 3","termid":"PBO:0065609"}


id: GO:0060858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane which are then targeted to, and fuse with, an acceptor membrane contributing to the shedding of a floral organ.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle-mediated transport involved in floral organ abscission","synonyms":[{"name":"membrane trafficking involved in floral organ shedding","type":"related"}],"termid":"GO:0060858"}


id: GO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"myofibril","secondary_identifiers":["Wikipedia:Myofibril"],"termid":"GO:0030016"}


id: PBO:0047524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 4","termid":"PBO:0047524"}


id: GO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol catabolic process","synonyms":[{"name":"PtdIns catabolic process","type":"exact"},{"name":"PtdIns catabolism","type":"exact"},{"name":"phosphatidylinositol breakdown","type":"exact"},{"name":"phosphatidylinositol catabolism","type":"exact"},{"name":"phosphatidylinositol degradation","type":"exact"}],"termid":"GO:0031161"}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: GO:0052080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a MAP kinase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host MAPK cascade","secondary_identifiers":["GO:0052277"],"synonyms":[{"name":"modulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"related"},{"name":"modulation by symbiont of host innate immune response MAPK kinase signaling","type":"narrow"},{"name":"modulation of defense-related host MAPK-mediated signal transduction pathway by organism","type":"narrow"},{"name":"modulation of defense-related host mitogen activated protein kinase-mediated signal transduction pathway by organism","type":"narrow"},{"name":"perturbation by symbiont of host MAP kinase signal transduction pathway","type":"exact"},{"name":"perturbation of host MAP signal transduction pathway","type":"exact"},{"name":"perturbation of host MAPK kinase signaling pathway","type":"exact"},{"name":"perturbation of host MAPK signal transduction pathway","type":"exact"},{"name":"perturbation of host innate immune response MAPK kinase signaling","type":"narrow"}],"termid":"GO:0052080"}


id: PBO:0087589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; has mRNA binding activity","termid":"PBO:0087589"}


id: PBO:0076640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 2","termid":"PBO:0076640"}


id: GO:1904604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["PMID:16503878","GOC:krc","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of advanced glycation end-product receptor activity","termid":"GO:1904603"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of advanced glycation end-product receptor activity","synonyms":[{"name":"down regulation of AGE receptor activity","type":"exact"},{"name":"down regulation of RAGE activity","type":"exact"},{"name":"down regulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"down-regulation of AGE receptor activity","type":"exact"},{"name":"down-regulation of RAGE activity","type":"exact"},{"name":"down-regulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"downregulation of AGE receptor activity","type":"exact"},{"name":"downregulation of RAGE activity","type":"exact"},{"name":"downregulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"inhibition of AGE receptor activity","type":"narrow"},{"name":"inhibition of RAGE activity","type":"narrow"},{"name":"inhibition of advanced glycation end-product receptor activity","type":"narrow"},{"name":"negative regulation of AGE receptor activity","type":"exact"},{"name":"negative regulation of RAGE activity","type":"exact"}],"termid":"GO:1904604"}


id: FYPO:0001841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal adenylyl cyclase activity","synonyms":[{"name":"abnormal adenylate cyclase activity","type":"exact"}],"termid":"FYPO:0001841"}


id: PR:Q9USX9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor B polypeptide 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04007","PANTHER:PTHR20648:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.07","secondary_identifiers":["UniProtKB:Q9USX9"],"synonyms":[{"name":"Spom972h-TCEB1","type":"exact"}],"termid":"PR:Q9USX9"}


id: PBO:0044422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 7","termid":"PBO:0044422"}


id: GO:0102356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + (+)-isoitalicene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoitalicene synthase activity (obsolete GO:0102356)","termid":"GO:0102356"}


id: PBO:0042736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein N","termid":"PBO:0042736"}


id: FYPO:0006524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which sister kinetochores separate during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:11598020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0000337","FYPO:0000631"],"is_obsolete":false,"name":"premature sister kinetochore separation during mitotic G2 phase","synonyms":[{"name":"premature sister kinetochore separation during G2 phase during vegetative growth","type":"exact"},{"name":"premature sister kinetochore separation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"split kinetochores during mitotic G2 phase","type":"related"}],"termid":"FYPO:0006524"}


id: PBO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase (predicted)","termid":"PBO:0001244"}


id: GO:0006885
data:
  {"annotated_genes":["SJAG_01817","SJAG_00136","SJAG_00516","SJAG_02023","SJAG_01669","SJAG_00212","SJAG_02470","SJAG_05294","SJAG_00301","SJAG_01913","SJAG_04616","SJAG_02716","SJAG_04955","SJAG_01129","SJAG_01397","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[95393,84292,84293,110281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[95485,98536,86432,96571,92225,85903,84628,98190,100454,115228,86748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen ion homeostasis","type":"exact"}],"termid":"GO:0006885","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: GO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0061407)","termid":"GO:0061407"}


id: PBO:0054707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2116","termid":"PBO:0054707"}


id: FYPO:0001769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased tRNA-Asp C38 methylation","synonyms":[{"name":"increased tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"increased tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"increased tRNA-Asp methylation on C38","type":"exact"}],"termid":"FYPO:0001769"}


id: PBO:0029694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lobate_nuclear_envelope","termid":"PBO:0029694"}


id: PBO:0068233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 4","termid":"PBO:0068233"}


id: GO:1904041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["PMID:24416422","GOC:BHF","GOC:hal","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cystathionine beta-synthase activity","synonyms":[{"name":"regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"regulation of beta-thionase activity","type":"exact"},{"name":"regulation of methylcysteine synthase activity","type":"exact"},{"name":"regulation of serine sulfhydrase activity","type":"exact"},{"name":"regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904041"}


id: PBO:0091631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lactate dehydrogenase","termid":"PBO:0091631"}


id: GO:0034080
data:
  {"annotated_genes":["SJAG_02303","SJAG_02119","SJAG_02908","SJAG_03619","SJAG_00045","SJAG_03867","SJAG_04989","SJAG_00684","SJAG_04038","SJAG_04696","SJAG_03183","SJAG_04547","SJAG_00873","SJAG_00756","SJAG_04581","SJAG_02872","SJAG_01611","SJAG_00307","SJAG_03905","SJAG_05273"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85459,86275,86651,89365,91266,92042,95709,95957,98616,99453,102890,103875,107704,109628,110732,111592,112980,114200,115314,115350],"is_not":false,"summary":null,"term":"GO:0034080"}]},"cv_name":"biological_process","definition":"The formation of chromatin containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["PMID:35422390","GOC:mah","GOC:vw","PMID:18158900","PMID:19217403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling at centromere","termid":"GO:0031055"},{"relation_name":"part_of","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00307":null,"SJAG_00684":null,"SJAG_00756":null,"SJAG_00873":null,"SJAG_01611":null,"SJAG_02119":null,"SJAG_02303":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03183":null,"SJAG_03619":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04547":null,"SJAG_04581":null,"SJAG_04696":null,"SJAG_04989":null,"SJAG_05273":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0006325"],"is_obsolete":false,"name":"CENP-A containing chromatin assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061641","GO:0034509"],"synonyms":[{"name":"centromeric chromatin organization","type":"related"},{"name":"CENP-A containing chromatin organization","type":"related"},{"name":"CENP-A containing nucleosome assembly","type":"related"},{"name":"CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"CENP-A deposition","type":"related"},{"name":"CENP-A loading","type":"related"},{"name":"CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"centromere specific nucleosome exchange","type":"related"},{"name":"centromere-specific histone exchange","type":"exact"},{"name":"centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:0034080","terms_by_termid":{"GO:0034080":null}}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: PBO:0044949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 5","termid":"PBO:0044949"}


id: GO:1905940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gonad development.","definition_xrefs":["GO_REF:0000058","PMID:15342467","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of gonad development","termid":"GO:1905939"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gonad development","synonyms":[{"name":"down regulation of gonad development","type":"exact"},{"name":"down regulation of gonadogenesis","type":"exact"},{"name":"down-regulation of gonad development","type":"exact"},{"name":"down-regulation of gonadogenesis","type":"exact"},{"name":"downregulation of gonad development","type":"exact"},{"name":"downregulation of gonadogenesis","type":"exact"},{"name":"inhibition of gonad development","type":"narrow"},{"name":"inhibition of gonadogenesis","type":"narrow"},{"name":"negative regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905940"}


id: PR:O59719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.11","synonyms":[{"name":"Spom972h-rrn6","type":"exact"}],"termid":"PR:O59719"}


id: GO:0000145
data:
  {"annotated_genes":["SJAG_04960","SJAG_03864","SJAG_02320","SJAG_02753","SJAG_04044","SJAG_03938","SJAG_03357","SJAG_02166","SJAG_01925"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85209,87332,96111,98470,110374,110665,112151,114230,115330],"is_not":false,"summary":null,"term":"GO:0000145"}]},"cv_name":"cellular_component","definition":"A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.","definition_xrefs":["PMID:15292201","GOC:cilia","PMID:9700152","PMID:27243008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"exocyst","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Exocyst"],"synonyms":[{"name":"Sec6/8 complex","type":"exact"},{"name":"exocyst complex","type":"exact"}],"termid":"GO:0000145","terms_by_termid":{"GO:0000145":null}}


id: PBO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 4","termid":"PBO:0060645"}


id: GO:1903837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:als","PMID:19575011","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA 3'-UTR binding","synonyms":[{"name":"regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903837"}


id: PBO:0059503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 8","termid":"PBO:0059503"}


id: PBO:0052596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 4","termid":"PBO:0052596"}


id: GO:0102124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + O2 + H+ + NAD(P)H = 16alpha, 17-epoxy gibberellin A12 + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12 16alpha,17 epoxidase activity (obsolete GO:0102124)","termid":"GO:0102124"}


id: GO:0031955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acid + ATP + CoA = a short-chain fatty acyl-CoA + AMP + diphosphate. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["RHEA:52860","PMID:34904027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acid-CoA ligase activity","synonyms":[{"name":"short-chain fatty acid activation","type":"related"},{"name":"short-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"short-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031955"}


id: PR:Q10108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.09c gene.","definition_xrefs":["UniProtKB:Q10108","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.09c","synonyms":[{"name":"Spom972h-SPAC18G6.09c","type":"exact"}],"termid":"PR:Q10108"}


id: FYECO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arsenic was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arsenic","termid":"FYECO:0000259"}


id: GO:0019317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fucose catabolic process","secondary_identifiers":["MetaCyc:FUCCAT-PWY"],"synonyms":[{"name":"fucose breakdown","type":"exact"},{"name":"fucose catabolism","type":"exact"},{"name":"fucose degradation","type":"exact"}],"termid":"GO:0019317"}


id: GO:0030343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vitamin D3 + NADPH + H+ + O2 = calcidiol + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-9829","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 25-hydroxylase activity","termid":"GO:0070643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vitamin D3 25-hydroxylase activity","secondary_identifiers":["RHEA:32903","Reactome:R-HSA-5602147","Reactome:R-HSA-209845"],"synonyms":[{"name":"cholecalciferol 25-hydroxylase activity","type":"exact"}],"termid":"GO:0030343"}


id: GO:0017178
data:
  {"annotated_genes":["SJAG_04544"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107688],"is_not":false,"summary":null,"term":"GO:0017178"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + diphthine + NH4 = ADP + diphthamide + H+ + phosphate.","definition_xrefs":["EC:6.3.1.14","RHEA:19753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diphthine-ammonia ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIPHTINE--AMMONIA-LIGASE-RXN","Reactome:R-HSA-5358475","KEGG_REACTION:R03613"],"synonyms":[{"name":"diphthamide synthase activity","type":"related"},{"name":"diphthamide synthetase activity","type":"related"},{"name":"diphthine:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0017178","terms_by_termid":{"GO:0017178":null}}


id: PBO:0054804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2217","termid":"PBO:0054804"}


id: GO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that takes place mainly in germinal center B cells in which a large number of mutations are generated in the heavy chain and light chain V-region genes and their immediately surrounding introns in order to increase antibody diversity and contribute to affinity maturation.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"peripheral B cell receptor editing","synonyms":[{"name":"peripheral B lymphocyte receptor editing","type":"exact"},{"name":"peripheral B-cell receptor editing","type":"exact"},{"name":"peripheral B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002345"}


id: FYPO:0007315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K8 acetylation during vegetative growth","termid":"FYPO:0005308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K8 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H4-K8 acetylation at subtelomere during vegetative growth","type":"related"},{"name":"increased histone H4-K8 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K8 acetylation at subtelomeric heterochromatin region during vegetative growth","type":"exact"},{"name":"increased histone H4K8 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased subtelomeric heterochromatin histone H4K8 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007315"}


id: PBO:0054048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1389","termid":"PBO:0054048"}


id: PBO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aph-1 homolog B, gamma-secretase subunit","termid":"PBO:0039698"}


id: PBO:0056773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 23","termid":"PBO:0056773"}


id: GO:0048289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to IgE biosynthesis, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and IgE constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149","PMID:12370374","PMID:2113175","PMID:9186655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"isotype switching to IgE isotypes","synonyms":[{"name":"class switch recombination to IgE isotypes","type":"exact"},{"name":"class switching to IgE isotypes","type":"exact"},{"name":"isotype switch recombination to IgE isotypes","type":"exact"}],"termid":"GO:0048289"}


id: MOD:00004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Artifact entry from Unimod - OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00004 artifact (obsolete MOD:00004)","termid":"MOD:00004"}


id: GO:0106008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutaramate + H2O = 2-oxoglutarate + NH3.","definition_xrefs":["EC:3.5.1.111","PMID:21288482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"2-oxoglutaramate amidase activity","secondary_identifiers":["RHEA:32963"],"termid":"GO:0106008"}


id: PBO:0079158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 17","termid":"PBO:0079158"}


id: PBO:0040281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1A1 antisense RNA 1","termid":"PBO:0040281"}


id: FYPO:0001133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA replication","termid":"FYPO:0001133"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: GO:0097305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["PMID:24014527","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alcohol","secondary_identifiers":["GO:1990335"],"synonyms":[{"name":"process resulting in tolerance to alcohol","type":"narrow"}],"termid":"GO:0097305"}


id: PBO:0075567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor","termid":"PBO:0075567"}


id: GO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antrum is swollen with follicular fluid. The ovum is ready to erupt from the ovary and is arrested at metaphase of the second meiotic division.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature follicle stage","synonyms":[{"name":"mammalian oogenesis stage 9","type":"exact"}],"termid":"GO:0048166"}


id: GO:1905202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of methylcrotonoyl-CoA carboxylase activity. In mammals, it is a mitochondrial complex comprising a dodecamer of 6 alpha and 6 beta subunits: MCCC-alpha has a covalently bound biotin essential for the ATP-dependent carboxylation; MCCC-beta possesses carboxyltransferase activity which presumably is essential for binding to 3-methylcrotonyl-CoA.","definition_xrefs":["PMID:15868465","GOC:bf","PMID:17360195","GOC:hjd","PMID:22158123","GOC:PARL","PMID:22869039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methylcrotonoyl-CoA carboxylase complex","termid":"GO:1905202"}


id: PBO:0054611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2016","termid":"PBO:0054611"}


id: PBO:0043041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHN2 antisense RNA 1","termid":"PBO:0043041"}


id: GO:0060658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nipple is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"},{"relation_name":"part_of","term_name":"nipple development","termid":"GO:0060618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nipple morphogenesis","termid":"GO:0060658"}


id: PBO:0029411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_cell_cycle_checkpoint_signaling","termid":"PBO:0029411"}


id: GO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"modulation of development of symbiont during interaction with host","type":"related"},{"name":"modulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044145"}


id: SOFP:description
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Free-text description of feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"description","termid":"SOFP:description"}


id: FYPO:0006763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the meiotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The meiotic DNA replication checkpoint normally prevents the initiation of meiotic nuclear division until pre-meiotic DNA replication is complete.","definition_xrefs":["PMID:10521402","PomBase:mah","GO:0033315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint phenotype","termid":"FYPO:0005511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiotic cell cycle DNA replication checkpoint","synonyms":[{"name":"abolished meiotic DNA replication checkpoint","type":"exact"},{"name":"abolished meiotic G2/MI DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0006763"}


id: PBO:0076314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synemin","termid":"PBO:0076314"}


id: GO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting immunoglobulin, via transcytosis, from one side of an epithelial cell to the other.","definition_xrefs":["ISBN:0781735149","PMID:16048543","ISBN:081533642X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"}


id: PBO:0109087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 1","termid":"PBO:0109087"}


id: FYPO:0001038
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115774],"is_not":false,"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001038","terms_by_termid":{"FYPO:0001038":null}}


id: GO:0016891
data:
  {"annotated_genes":["SJAG_02553","SJAG_06613","SJAG_01884","SJAG_02374","SJAG_01463","SJAG_01623","SJAG_04019","SJAG_02156","SJAG_04916","SJAG_00306","SJAG_00400","SJAG_02790","SJAG_00997","SJAG_03234","SJAG_00955","SJAG_01433","SJAG_03796","SJAG_02039","SJAG_06022","SJAG_04582","SJAG_04527","SJAG_02621","SJAG_04885","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88789,114600],"is_not":false,"summary":null,"term":"GO:0016891"},{"annotations":[88731,106428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[114598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[99987,72940,106371,112505,98729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[91282,98608,101311,110004,111822,115096,101094,93364,96059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[105655,84895,94691,99494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016893"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00400":null,"SJAG_00955":null,"SJAG_00997":null,"SJAG_01433":null,"SJAG_01463":null,"SJAG_01623":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02156":null,"SJAG_02374":null,"SJAG_02553":null,"SJAG_02621":null,"SJAG_02790":null,"SJAG_03234":null,"SJAG_03689":null,"SJAG_03796":null,"SJAG_04019":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04885":null,"SJAG_04916":null,"SJAG_06022":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140098","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"RNA endonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.26.-"],"synonyms":[{"name":"endoribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016891","terms_by_termid":{"GO:0004523":null,"GO:0004525":null,"GO:0004526":null,"GO:0008419":null,"GO:0016891":null,"GO:0042781":null,"GO:0070551":null,"GO:1990174":null}}


id: PBO:0061549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic II","termid":"PBO:0061549"}


id: PBO:0027141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity","termid":"PBO:0027141"}


id: PBO:0085174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omega class glutathione transferase; putative cytosolic localization","termid":"PBO:0085174"}


id: PBO:0038948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase 1 pseudogene 3","termid":"PBO:0038948"}


id: PBO:0035854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_nucleosome-depleted_regions_during_vegetative_growth","termid":"PBO:0035854"}


id: PBO:0072524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 53","termid":"PBO:0072524"}


id: MOD:00045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-phospho-L-histidine (N-pi-phospho-L-histidine, 3'-phospho-L-histidine).","definition_xrefs":["PubMed:1549615","RESID:AA0036","PubMed:5642389","PubMed:6692818","PubMed:7803390","PubMed:7669763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"3'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(3-phosphono-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-phospho-L-histidine","type":"exact"},{"name":"ACT_SITE Pros-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Pros-phosphohistidine","type":"exact"},{"name":"N(pi)-phosphohistidine","type":"exact"},{"name":"N3-phosphonohistidine","type":"exact"},{"name":"ND1-phosphonohistidine","type":"exact"},{"name":"NpPHis","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-1-phosphate","type":"related"},{"name":"histidine-N(delta)-phosphate","type":"exact"},{"name":"histidine-N3'-phosphate","type":"exact"},{"name":"pros-phosphohistidine","type":"exact"}],"termid":"MOD:00045"}


id: PBO:0055508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2942","termid":"PBO:0055508"}


id: GO:1904368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sclerenchyma cell differentiation.","definition_xrefs":["PMID:26025534","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sclerenchyma cell differentiation","termid":"GO:0014001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerenchyma cell differentiation","termid":"GO:1904368"}


id: GO:0016939
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes.","definition_xrefs":["PMID:20930137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"kinesin II complex","termid":"GO:0016939"}


id: PBO:0017428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_a","termid":"PBO:0017428"}


id: GO:0045663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:go_curators","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myoblast differentiation","termid":"GO:0045661"},{"relation_name":"positively_regulates","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast differentiation","synonyms":[{"name":"activation of myoblast differentiation","type":"narrow"},{"name":"stimulation of myoblast differentiation","type":"narrow"},{"name":"up regulation of myoblast differentiation","type":"exact"},{"name":"up-regulation of myoblast differentiation","type":"exact"},{"name":"upregulation of myoblast differentiation","type":"exact"}],"termid":"GO:0045663"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: GO:1903895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:22013210","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900102"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"negatively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"down regulation of IRE1 branch of UPR","type":"exact"},{"name":"down regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"down-regulation of IRE1 branch of UPR","type":"exact"},{"name":"down-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"downregulation of IRE1 branch of UPR","type":"exact"},{"name":"downregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"downregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"downregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"downregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"downregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"downregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"downregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"inhibition of IRE1 branch of UPR","type":"narrow"},{"name":"inhibition of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"inhibition of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1alpha unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1p unfolded protein response","type":"narrow"},{"name":"inhibition of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"inhibition of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"inhibition of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"negative regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"negative regulation of IRE1 branch of UPR","type":"exact"},{"name":"negative regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"negative regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"negative regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"negative regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"negative regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"negative regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903895"}


id: PBO:0064096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITX1 antisense RNA 1","termid":"PBO:0064096"}


id: PBO:0047115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member B","termid":"PBO:0047115"}


id: PBO:0050718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 4","termid":"PBO:0050718"}


id: GO:0006739
data:
  {"annotated_genes":["SJAG_04263","SJAG_01582","SJAG_02696","SJAG_03786","SJAG_02191","SJAG_00633","SJAG_04334","SJAG_02148","SJAG_02297","SJAG_03934","SJAG_03091","SJAG_03946","SJAG_04362","SJAG_00685","SJAG_01824","SJAG_03852","SJAG_01566","SJAG_02154","SJAG_05314","SJAG_00501","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94043,88492,93025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[91678,97419,98649,91679,98650,96342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[85526,92931,110322,104954],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[94759,111844,93554,108102,114946,91100,93465],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[86279],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75373],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01824":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03091":null,"SJAG_03786":null,"SJAG_03852":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD phosphorylation and dephosphorylation","type":"related"},{"name":"NADP (oxidized) metabolic process","type":"exact"},{"name":"NADP (oxidized) metabolism","type":"exact"},{"name":"NADP (reduced) metabolic process","type":"exact"},{"name":"NADP (reduced) metabolism","type":"exact"},{"name":"NADP metabolism","type":"exact"},{"name":"NADPH metabolic process","type":"exact"},{"name":"NADPH metabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"oxidized NADP metabolic process","type":"exact"},{"name":"oxidized NADP metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"reduced NADP metabolic process","type":"exact"},{"name":"reduced NADP metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:0006739","terms_by_termid":{"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0009051":null,"GO:0009052":null,"GO:0043456":null,"GO:1905857":null}}


id: PBO:0060600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit G2","termid":"PBO:0060600"}


id: PBO:0086341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudosubstrate inhibitor of the APC/C; suppresses APC/C [Cdh1]-mediated proteolysis of mitotic cyclins; associates with Cdh1p, Bmh1p and Bmh2p; cell cycle regulated protein; the anaphase-promoting complex/cyclosome is also known as APC/C","termid":"PBO:0086341"}


id: PBO:0005374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa (predicted)","termid":"PBO:0005374"}


id: GO:0033204
data:
  {"annotated_genes":["SJAG_01623","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101095,115097],"is_not":false,"summary":null,"term":"GO:0033204"}]},"cv_name":"molecular_function","definition":"Binding to RNA subunit of ribonuclease P.","definition_xrefs":["GOC:pg","PMID:11455963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01623":null,"SJAG_03796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribonuclease P RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase P RNA binding","type":"exact"}],"termid":"GO:0033204","terms_by_termid":{"GO:0033204":null}}


id: PBO:0074271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 12 like","termid":"PBO:0074271"}


id: PBO:0073870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B2","termid":"PBO:0073870"}


id: PBO:0078566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 50","termid":"PBO:0078566"}


id: PBO:0054306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1698","termid":"PBO:0054306"}


id: GO:0035288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments.","definition_xrefs":["PMID:15382136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head segmentation","termid":"GO:0035287"},{"relation_name":"part_of","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head segmentation","synonyms":[{"name":"procephalic segmentation","type":"related"}],"termid":"GO:0035288"}


id: GO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + H+ + NADPH.","definition_xrefs":["RHEA:14909","EC:1.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-glucuronate reductase activity","secondary_identifiers":["KEGG_REACTION:R01481","Reactome:R-HSA-5661256","MetaCyc:GLUCURONATE-REDUCTASE-RXN"],"synonyms":[{"name":"D-glucuronate dehydrogenase activity","type":"related"},{"name":"D-glucuronate reductase activity","type":"narrow"},{"name":"NADP-L-gulonate dehydrogenase activity","type":"related"},{"name":"TPN-L-gulonate dehydrogenase activity","type":"related"},{"name":"aldehyde reductase II activity","type":"related"},{"name":"glucuronate dehydrogenase activity","type":"related"},{"name":"glucuronate reductase activity","type":"exact"}],"termid":"GO:0047939"}


id: PBO:0090721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1","termid":"PBO:0090721"}


id: GO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to platelet-derived growth factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"platelet-derived growth factor binding","synonyms":[{"name":"PDGF binding","type":"exact"}],"termid":"GO:0048407"}


id: PBO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transmembrane transporter Pgt1","termid":"PBO:0017842"}


id: PBO:0084887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial thioredoxin reductase; involved in protection against oxidative stress, required with Glr1p to maintain the redox state of Trx3p; contains active-site motif (CAVC) present in prokaryotic orthologs; binds NADPH and FAD; TRR2 has a paralog, TRR1, that arose from the whole genome duplication","termid":"PBO:0084887"}


id: PBO:0111800
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Req family helicase","termid":"PBO:0111800"}


id: FYECO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lysine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lys","synonyms":[{"name":"lysine added","type":"exact"}],"termid":"FYECO:0000199"}


id: SO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is part of a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_CDS","synonyms":[{"name":"transposable element CDS","type":"exact"}],"termid":"SO:0001896"}


id: FYPO:0003651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to nitrosative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrosative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003651"}


id: PBO:0068170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 477","termid":"PBO:0068170"}


id: PBO:0028902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028902"}


id: PBO:0041857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4","termid":"PBO:0041857"}


id: GO:0045550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of phytyl group from the stepwise reduction of a geranylgeranyl group.","definition_xrefs":["PMID:9492312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"geranylgeranyl reductase activity","termid":"GO:0045550"}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GOC:krc","PMID:20179351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type peptidase activity","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: PBO:0085084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0085084"}


id: PBO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S1","termid":"PBO:0060790"}


id: PR:O94613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH-dependent diflavin oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00283","PANTHER:PTHR19384:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.06","secondary_identifiers":["UniProtKB:O94613"],"synonyms":[{"name":"NADPH-dependent FMN and FAD-containing oxidoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDOR1","type":"exact"}],"termid":"PR:O94613"}


id: GO:1902993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:rl","PMID:24499793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"positively_regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"activation of APP catabolic process","type":"narrow"},{"name":"activation of APP catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of APP catabolic process","type":"exact"},{"name":"positive regulation of APP catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of APP catabolic process","type":"exact"},{"name":"up regulation of APP catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of APP catabolic process","type":"exact"},{"name":"up-regulation of APP catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of APP catabolic process","type":"exact"},{"name":"upregulation of APP catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902993"}


id: PBO:0005103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C PHD Finger protein Spf1","termid":"PBO:0005103"}


id: PBO:0026830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026830"}


id: GO:0038143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated receptor ERBB3. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB3.","definition_xrefs":["PMID:16460914","GOC:signaling","PMID:8665853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ERBB3:ERBB2 complex","synonyms":[{"name":"EGFR:ERBB2 heterodimer","type":"narrow"},{"name":"NRG1/2:ERBB3:ERBB2","type":"narrow"}],"termid":"GO:0038143"}


id: PBO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg1 (predicted)","termid":"PBO:0015253"}


id: PBO:0039391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaelysin family metallopeptidase 2","termid":"PBO:0039391"}


id: GO:0007019
data:
  {"annotated_genes":["SJAG_02336","SJAG_00723","SJAG_02624","SJAG_04312","SJAG_01297","SJAG_01224","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86206,95194,100438,104782,114648],"is_not":false,"summary":null,"term":"GO:0007019"},{"annotations":[93856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[100446,104791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[98403],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of a microtubule.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00723":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_04312":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule catastrophe","type":"narrow"},{"name":"microtubule depolymerization during nuclear congression","type":"narrow"},{"name":"microtubule disassembly","type":"exact"},{"name":"microtubule shortening","type":"exact"}],"termid":"GO:0007019","terms_by_termid":{"GO:0007019":null,"GO:0031117":null,"GO:0060172":null,"GO:0070462":null}}


id: GO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte development","termid":"GO:0048599"}


id: PBO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase like","termid":"PBO:0061761"}


id: PBO:0082797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the yeast dynactin complex; consisting of Nip100p, Jnm1p, and Arp1p; required for proper nuclear migration and spindle partitioning during mitotic anaphase B","termid":"PBO:0082797"}


id: GO:1990660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of S100A8 and S100A9 and capable of limiting Mn(2+) and Zn(2+) availability at sites of infection. Also binds Ca(2+). Expressed and released by neutrophils and epithelial cells, it exhibits broad-spectrum antimicrobial activity attributed to its metal-binding properties. Endogenous ligand of toll-like receptor 4 (TLR4) and of the receptor for advanced glycation end products (RAGE) initiating signal transduction through NF-kappa-B pathways.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calprotectin complex","synonyms":[{"name":"calprotectin heterodimer","type":"narrow"}],"termid":"GO:1990660"}


id: GO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary development","synonyms":[{"name":"MHB development","type":"exact"},{"name":"isthmic organizer development","type":"exact"},{"name":"isthmomesencephalic boundary development","type":"exact"},{"name":"isthmus development","type":"exact"},{"name":"midbrain-hindbrain orgainizer development","type":"exact"}],"termid":"GO:0030917"}


id: PBO:0058004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3927","termid":"PBO:0058004"}


id: PBO:0038758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 3","termid":"PBO:0038758"}


id: PBO:0086388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cell wall mannoprotein; member of the Srp1p/Tip1p family of serine-alanine-rich proteins; transcription is induced by cold shock and anaerobiosis; TIR2 has a paralog, TIR3, that arose from the whole genome duplication","termid":"PBO:0086388"}


id: PR:Q10271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arb2 gene.","definition_xrefs":["UniProtKB:Q10271","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.07","synonyms":[{"name":"Spom972h-arb2","type":"exact"}],"termid":"PR:Q10271"}


id: PBO:0065865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB22A, member RAS oncogene family","termid":"PBO:0065865"}


id: GO:0052678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = abieta-8(14),12-diene + diphosphate.","definition_xrefs":["RHEA:25548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"levopimaradiene synthase activity","secondary_identifiers":["EC:4.2.3.32","KEGG_REACTION:R06302","MetaCyc:RXN-8511"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-abieta-8(14),12-diene-forming] activity","type":"exact"}],"termid":"GO:0052678"}


id: PBO:0083691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE17 has a paralog, ADE16, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083691"}


id: PBO:0059046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA mutase","termid":"PBO:0059046"}


id: PBO:0029050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029050"}


id: PBO:0089174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L21/aconitate hydratase, fusion protein","termid":"PBO:0089174"}


id: PR:O14258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ace2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein expression activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.12c","synonyms":[{"name":"Spom972h-ace2","type":"exact"}],"termid":"PR:O14258"}


id: FYPO:0000949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abolished septum assembly","termid":"FYPO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"aseptate","synonyms":[{"name":"absent septum","type":"exact"},{"name":"aseptate during mitotic cell cycle","type":"related"},{"name":"aseptate during vegetative growth","type":"exact"}],"termid":"FYPO:0000949"}


id: PBO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 5","termid":"PBO:0052598"}


id: PBO:0069651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 928, pseudogene","termid":"PBO:0069651"}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: PBO:0003825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane protein Mcp4/Mug101","termid":"PBO:0003825"}


id: GO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase (MAPKKK).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity (obsolete GO:0000185)","synonyms":[{"name":"activation of MAP kinase kinase kinase","type":"exact"},{"name":"activation of MAP3K activity","type":"exact"},{"name":"activation of MAPKKK activity during sporulation","type":"narrow"},{"name":"positive regulation of MAP kinase kinase kinase activity","type":"broad"},{"name":"positive regulation of MAPKKK activity","type":"broad"}],"termid":"GO:0000185"}


id: GO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a mammary duct.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland duct secondary branching","type":"exact"}],"termid":"GO:0060599"}


id: GO:0018491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanoate + CoA + oxidized ferredoxin = propanoyl-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-oxobutyrate synthase activity","secondary_identifiers":["MetaCyc:2-OXOBUTYRATE-SYNTHASE-RXN","RHEA:32135","UM-BBD_reactionID:r0358"],"synonyms":[{"name":"2-ketobutyrate synthase activity","type":"exact"},{"name":"2-oxobutanoate:ferredoxin 2-oxidoreductase (CoA-propionylating)","type":"exact"},{"name":"2-oxobutyrate-ferredoxin oxidoreductase activity","type":"exact"},{"name":"alpha-ketobutyrate synthase activity","type":"exact"},{"name":"alpha-ketobutyrate-ferredoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0018491"}


id: PBO:0015269
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non-functional as it contains a stop codon","termid":"PBO:0015269"}


id: PBO:0067629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 801, pseudogene","termid":"PBO:0067629"}


id: PBO:0113447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit l of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; more abundant in the ATP synthase monomer; involved in the calcium-induced permeability transition and calcium homeostasis; does not impact ATP synthase activity and stability; N-terminal region has sequence similarity to Atp19p; conserved in A. gossypii; detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113447"}


id: PBO:0089357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside 2-deoxyribosyltransferase","termid":"PBO:0089357"}


id: GO:0005209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma protein (obsolete GO:0005209)","synonyms":[{"name":"plasma protein","type":"exact"}],"termid":"GO:0005209"}


id: PBO:0078234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 16","termid":"PBO:0078234"}


id: GO:0007215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of glutamate to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","PMID:9131252","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glutamate receptor signaling pathway","synonyms":[{"name":"glutamate signaling pathway","type":"exact"},{"name":"glutamate signalling pathway","type":"exact"}],"termid":"GO:0007215"}


id: GO:1900555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"emericellamide metabolic process","synonyms":[{"name":"emericellamide metabolism","type":"exact"}],"termid":"GO:1900555"}


id: PBO:0086155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-rRNA processing; also required for 40S ribosomal subunit assembly","termid":"PBO:0086155"}


id: GO:0032742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-19 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-19 production","termid":"GO:0032662"},{"relation_name":"positively_regulates","term_name":"interleukin-19 production","termid":"GO:0032622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-19 production","secondary_identifiers":["GO:0045386"],"synonyms":[{"name":"activation of interleukin-19 production","type":"narrow"},{"name":"positive regulation of IL-19 production","type":"exact"},{"name":"positive regulation of interleukin-19 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-19 production","type":"narrow"},{"name":"up regulation of interleukin-19 production","type":"exact"},{"name":"up-regulation of interleukin-19 production","type":"exact"},{"name":"upregulation of interleukin-19 production","type":"exact"}],"termid":"GO:0032742"}


id: PBO:0059171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 2","termid":"PBO:0059171"}


id: PBO:0068695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 76, pseudogene","termid":"PBO:0068695"}


id: GO:0042067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of polarized ommatidia. Ommatidia occur in two chiral forms. The trapezoidal arrangement of photoreceptors in the dorsal part of the eye is the mirror image of that in the ventral part.","definition_xrefs":["GOC:dph","PMID:3076112","GOC:tb","PMID:3937883","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of ommatidial planar polarity","synonyms":[{"name":"establishment of ommatidial polarity","type":"exact"}],"termid":"GO:0042067"}


id: PBO:0085329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol synthase; required for biosynthesis of phosphatidylinositol, which is a precursor for polyphosphoinositides, sphingolipids, and glycolipid anchors for some of the plasma membrane proteins","termid":"PBO:0085329"}


id: PBO:0082775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU and 90S preribosomes; involved in pre-18S rRNA processing; binds to U3 snoRNA and Mpp10p; multicopy suppressor of sensitivity to Brefeldin A; expression is induced during lag phase and also by cold shock","termid":"PBO:0082775"}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["EC:1.1.99.3","MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: GO:0001882
data:
  {"annotated_genes":["SJAG_00637","SJAG_04410","SJAG_04030","SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"},{"annotations":[90671,109653,94722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032549"}]},"cv_name":"molecular_function","definition":"Binding to a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001882","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: PR:P40996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd2 gene.","definition_xrefs":["UniProtKB:P40996","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein scd2/ral3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.07","synonyms":[{"name":"Spom972h-scd2","type":"exact"}],"termid":"PR:P40996"}


id: GO:0006636
data:
  {"annotated_genes":["SJAG_00099","SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69576,110913],"is_not":false,"summary":null,"term":"GO:0006636"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms.","definition_xrefs":["MetaCyc:PWY-762","GOC:mah","MetaCyc:PWY-782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"unsaturated fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid desaturation","type":"related"},{"name":"polyunsaturated fatty acid biosynthesis","type":"narrow"},{"name":"unsaturated fatty acid anabolism","type":"exact"},{"name":"unsaturated fatty acid biosynthesis","type":"exact"},{"name":"unsaturated fatty acid formation","type":"exact"},{"name":"unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:0006636","terms_by_termid":{"GO:0006636":null}}


id: PBO:0038291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_type","termid":"PBO:0038291"}


id: PATO:0000771
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A preference quality in a bearer by virtue of the bearer's disliking a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preference","termid":"PATO:0000773"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aversion","termid":"PATO:0000771"}


id: GO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-cassa-12,15-diene + diphosphate.","definition_xrefs":["RHEA:25532","EC:4.2.3.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ent-cassa-12,15-diene synthase activity","secondary_identifiers":["KEGG_REACTION:R09119","MetaCyc:RXN-4881"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (ent-cassa-12,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034277"}


id: PBO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine) methyltransferase Trm5 (predicted)","termid":"PBO:0002315"}


id: PBO:0069454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 719, pseudogene","termid":"PBO:0069454"}


id: GO:0048226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Region of plant cell wall specialised to act as a seal to prevent back leakage of secreted material (analogous to tight junction between epithelial cells). Found particularly where root parenchymal cells secrete solutes into xylem vessels. The barrier is composed of suberin; a fatty substance, containing long chain fatty acids and fatty esters, also found in the cell walls of cork cells (phellem) in higher plants.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Casparian strip","secondary_identifiers":["Wikipedia:Casparian_strip"],"termid":"GO:0048226"}


id: PBO:0047311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas activated serine/threonine kinase","termid":"PBO:0047311"}


id: PBO:0055159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2578","termid":"PBO:0055159"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00145","SJAG_00666","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96694,98839],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[91728],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: GO:0043442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"},{"relation_name":"is_a","term_name":"acetoacetic acid metabolic process","termid":"GO:0043438"},{"relation_name":"is_a","term_name":"ketone body catabolic process","termid":"GO:0046952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0044248","GO:0006091"],"is_obsolete":false,"name":"acetoacetic acid catabolic process","synonyms":[{"name":"acetoacetic acid breakdown","type":"exact"},{"name":"acetoacetic acid catabolism","type":"exact"},{"name":"acetoacetic acid degradation","type":"exact"}],"termid":"GO:0043442"}


id: PBO:0069353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 613, pseudogene","termid":"PBO:0069353"}


id: PBO:0055464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2897","termid":"PBO:0055464"}


id: PBO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_modification_during_vegetative_growth","termid":"PBO:0031664"}


id: GO:0006887
data:
  {"annotated_genes":["SJAG_01048","SJAG_03763","SJAG_03005","SJAG_00826","SJAG_04343","SJAG_03938","SJAG_00332","SJAG_01563","SJAG_02012","SJAG_00355","SJAG_03499","SJAG_03915","SJAG_00661","SJAG_03357","SJAG_00280","SJAG_02518","SJAG_04044","SJAG_02166","SJAG_02753","SJAG_03864","SJAG_04058","SJAG_07004","SJAG_04517","SJAG_01772","SJAG_02587","SJAG_03536","SJAG_04509","SJAG_04960","SJAG_03246","SJAG_01722","SJAG_02366","SJAG_01697","SJAG_03718","SJAG_04966","SJAG_02572","SJAG_03754","SJAG_02320","SJAG_02368","SJAG_00430","SJAG_02004","SJAG_01448","SJAG_01925"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84583,84986,85350,87334,87724,87870,88055,88590,88848,90432,90818,91563,91599,94021,97400,98472,99213,101597,103916,104729,109426,112155,112730,113645,115035,115335],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[96732],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[84492,94973,90416],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[114934,114715,88908,115338,114012,86308,96810,87164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[115339,110377,85213,114232,98474,87335,96113,110669],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for example of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.","definition_xrefs":["GOC:mah","ISBN:0716731363","PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016194","GO:0016195","Wikipedia:Exocytosis"],"synonyms":[{"name":"nonselective vesicle exocytosis","type":"related"},{"name":"vesicle exocytosis","type":"exact"}],"termid":"GO:0006887","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: GO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming second","secondary_identifiers":["GO:0048276","GO:0010003"],"synonyms":[{"name":"deuterostomic gastrulation","type":"exact"}],"termid":"GO:0001702"}


id: PBO:0070025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1322, pseudogene","termid":"PBO:0070025"}


id: GO:0030780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 12-hydroxydihydrochelirubine + S-adenosyl-L-methionine(1+) = S-adenosyl-L-homocysteine + dihydromacarpine + H+.","definition_xrefs":["RHEA:21092","EC:2.1.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"12-hydroxydihydrochelirubine 12-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04705","MetaCyc:2.1.1.120-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:12-hydroxydihydrochelirubine 12-O-methyltransferase activity","type":"related"}],"termid":"GO:0030780"}


id: PATO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000377 frequency value (obsolete PATO:0000377)","termid":"PATO:0000377"}


id: SO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The promoter of a cryptic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"},{"relation_name":"part_of","term_name":"cryptic_gene","termid":"SO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_promoter","synonyms":[{"name":"cryptic promoter","type":"exact"}],"termid":"SO:0002310"}


id: GO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.","definition_xrefs":["PO:0009058","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perianth development","termid":"GO:0090428"}


id: PR:Q10176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01795","PANTHER:PTHR21049:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.07","secondary_identifiers":["UniProtKB:Q10176"],"synonyms":[{"name":"Spom972h-RPN1","type":"exact"},{"name":"oligosaccharyl transferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10176"}


id: PATO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being smaller and contracted, expecially due to loss of moisture.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shriveled","termid":"PATO:0002460"}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: PBO:0057308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-1","termid":"PBO:0057308"}


id: PBO:0078428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 5-1","termid":"PBO:0078428"}


id: PBO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 3","termid":"PBO:0043310"}


id: GO:0019341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzo-p-dioxin metabolic process","termid":"GO:0018894"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dibenzo-p-dioxin catabolic process","secondary_identifiers":["MetaCyc:P661-PWY"],"synonyms":[{"name":"dibenzo-p-dioxin breakdown","type":"exact"},{"name":"dibenzo-p-dioxin catabolism","type":"exact"},{"name":"dibenzo-p-dioxin degradation","type":"exact"}],"termid":"GO:0019341"}


id: PBO:0058206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4499","termid":"PBO:0058206"}


id: PBO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0002829"}


id: PBO:0049601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 4","termid":"PBO:0049601"}


id: GO:1901380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transport","termid":"GO:0043267"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of potassium ion transmembrane transport","synonyms":[{"name":"down regulation of potassium ion transmembrane transport","type":"exact"},{"name":"down-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"downregulation of potassium ion transmembrane transport","type":"exact"},{"name":"inhibition of potassium ion transmembrane transport","type":"narrow"},{"name":"negative regulation of potassium ion membrane transport","type":"exact"}],"termid":"GO:1901380"}


id: PBO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Mis20/Eic2","termid":"PBO:0016092"}


id: GO:0004384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + GMP = ADP + GDP, associated with the cell membrane.","definition_xrefs":["EC:2.7.4.8"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane-associated guanylate kinase (obsolete GO:0004384)","synonyms":[{"name":"MAGUK","type":"exact"},{"name":"membrane-associated guanylate kinase","type":"exact"}],"termid":"GO:0004384"}


id: PBO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper membrane transporter, meiotic Mfc1","termid":"PBO:0011099"}


id: PBO:0076998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12","termid":"PBO:0076998"}


id: PBO:0034047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_homology_relationship_with","termid":"PBO:0034047"}


id: GO:0008981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protease IV activity (obsolete GO:0008981)","synonyms":[{"name":"protease IV activity","type":"exact"}],"termid":"GO:0008981"}


id: PBO:0030468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pantothenate_import","termid":"PBO:0030468"}


id: FYPO:0000152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to nitrogen starvation","synonyms":[{"name":"abnormal cellular response to nitrogen depletion","type":"exact"},{"name":"abnormal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000152"}


id: GO:1901148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["PMID:18668558","GOC:pg","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"gene expression involved in extracellular matrix organization","synonyms":[{"name":"expression of extracellular matrix proteins","type":"exact"},{"name":"extracellular matrix protein production","type":"related"}],"termid":"GO:1901148"}


id: PBO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 1","termid":"PBO:0080064"}


id: PBO:0064049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 83","termid":"PBO:0064049"}


id: GO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"isocitrate dehydrogenase complex (NAD+)","termid":"GO:0045242"}


id: PBO:0071326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 2","termid":"PBO:0071326"}


id: PBO:0084202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-CoA reductase; converts HMG-CoA to mevalonate, a rate-limiting step in sterol biosynthesis; one of two isozymes; overproduction induces assembly of peripheral ER membrane arrays and short nuclear-associated membrane stacks; forms foci at nuclear periphery upon DNA replication stress; HMG2 has a paralog, HMG1, that arose from the whole genome duplication; human homolog HMGCR can complement yeast hmg2 mutant","termid":"PBO:0084202"}


id: PBO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP93 divergent transcript","termid":"PBO:0061679"}


id: GO:0016714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced pteridine and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.16.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}


id: PBO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PHD finger","termid":"PBO:0000447"}


id: GO:0099106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a channel via direct interaction with it. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ion channel regulator activity","termid":"GO:0099106"}


id: MOD:00260
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and the 5'-end of DNA through a phosphodiester bond to form O-(phospho-5'-DNA)-L-threonine.","definition_xrefs":["RESID:AA0255","PubMed:3081736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-DNA)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-(5'-deoxyribonucleic acid phosphonoxy)butanoic acid","type":"exact"},{"name":"O-(phospho-5'-DNA)-L-threonine","type":"exact"},{"name":"O3-(phospho-5'-DNA)-L-threonine","type":"exact"},{"name":"O3-L-threonine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00260"}


id: PBO:0079451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 1","termid":"PBO:0079451"}


id: PBO:0086995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Sec6p, Yip3p, and Sbh1p; less abundant than RTN1; member of RTNLA (reticulon-like A) subfamily; protein increases in abundance and relocalizes to plasma membrane upon DNA replication stress","termid":"PBO:0086995"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: PBO:0030028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_adenylyl_cyclase_activity","termid":"PBO:0030028"}


id: PBO:0058166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4460","termid":"PBO:0058166"}


id: SO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of an edited transcript that will not be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unedited_region","synonyms":[{"name":"unedited region","type":"exact"}],"termid":"SO:0000607"}


id: PBO:0074300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog A, structure-specific endonuclease subunit","termid":"PBO:0074300"}


id: GO:0031543
data:
  {"annotated_genes":["SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108242,108243],"is_not":false,"summary":null,"term":"GO:0031543"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:vw","PMID:24550447","PMID:24550462","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"peptidyl-proline dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"}],"termid":"GO:0031543","terms_by_termid":{"GO:0031543":null}}


id: PBO:0049819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 10","termid":"PBO:0049819"}


id: GO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an endoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of endodermal cell fate specification","termid":"GO:0042663"},{"relation_name":"is_a","term_name":"negative regulation of endodermal cell differentiation","termid":"GO:1903225"},{"relation_name":"negatively_regulates","term_name":"endodermal cell fate specification","termid":"GO:0001714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodermal cell fate specification","synonyms":[{"name":"down regulation of endodermal cell fate specification","type":"exact"},{"name":"down-regulation of endodermal cell fate specification","type":"exact"},{"name":"downregulation of endodermal cell fate specification","type":"exact"},{"name":"inhibition of endodermal cell fate specification","type":"narrow"},{"name":"negative regulation of endoderm cell fate specification","type":"exact"},{"name":"suppression of endoderm cell fate","type":"exact"},{"name":"suppression of endodermal cell fate","type":"exact"}],"termid":"GO:0042664"}


id: FYPO:0006142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal G0 to G1 transition","synonyms":[{"name":"normal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0006142"}


id: PBO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p14.2)","termid":"PBO:0047926"}


id: PBO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR95","termid":"PBO:0003637"}


id: PBO:0045420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox","termid":"PBO:0045420"}


id: PBO:0065891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB38, member RAS oncogene family","termid":"PBO:0065891"}


id: PBO:0057991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3915","termid":"PBO:0057991"}


id: GO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the detection of carbon dioxide levels in the brain stem. Increased levels activate the sympathetic vasoconstrictor mechanism increasing the force with which blood flows through the circulatory system.","definition_xrefs":["ISBN:0721643949","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by ischemic conditions","synonyms":[{"name":"CNS ischemic response","type":"related"},{"name":"ischemic control of blood pressure","type":"related"},{"name":"ischemic regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001980"}


id: FYPO:0000511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear fusion during mating","synonyms":[{"name":"abolished nuclear fusion during conjugation","type":"exact"},{"name":"absent nuclear fusion during mating","type":"exact"},{"name":"karyogamy abolished","type":"exact"},{"name":"karyogamy involved in conjugation with cellular fusion abolished","type":"exact"},{"name":"nuclear fusion during mating abolished","type":"exact"},{"name":"nuclear fusion during mating: absent","type":"related"}],"termid":"FYPO:0000511"}


id: PBO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein subunit of SEA and Iml1 complexes Iml1 (predicted)","termid":"PBO:0036477"}


id: PBO:0075326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of glucose, autophagy associated 1","termid":"PBO:0075326"}


id: PBO:0035891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatidylserine_externalization","termid":"PBO:0035891"}


id: PBO:0057586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 891a","termid":"PBO:0057586"}


id: GO:0141048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to a lipid, where it acts as a marker for a membrane, recognized by the cellular apparatus to target the tagged protein for some cellular process such as autophagy.","definition_xrefs":["PMID:17632063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular tag activity","termid":"GO:0141047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane tag activity","synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"lipid tag","type":"exact"}],"termid":"GO:0141048"}


id: PBO:0043066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 2","termid":"PBO:0043066"}


id: FYPO:0004159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation is abnormal. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["GO:0045143","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal homologous chromosome segregation","synonyms":[{"name":"abnormal chromosome disjunction at meiosis I","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I","type":"exact"},{"name":"abnormal homologous chromosome disjunction","type":"exact"},{"name":"chromosome missegregation during meiosis I","type":"related"},{"name":"homologous chromosome missegregation","type":"related"},{"name":"meiotic chromosome missegregation","type":"related"}],"termid":"FYPO:0004159"}


id: GO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 2 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to extracellular organisms such as helminths, enhanced production of particular antibody isotypes, and pathological conditions such as allergy.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell lineage commitment","synonyms":[{"name":"T-helper 2 cell fate commitment","type":"exact"},{"name":"Th2 fate commitment","type":"exact"}],"termid":"GO:0002297"}


id: FYPO:0004034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutathione transferase activity","synonyms":[{"name":"reduced glutathione transferase activity","type":"exact"}],"termid":"FYPO:0004034"}


id: GO:0051027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of RNA, deoxyribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transport","termid":"GO:0050657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"DNA transport","termid":"GO:0051027"}


id: PATO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000164 relative temporal (obsolete PATO:0000164)","termid":"PATO:0000164"}


id: GO:0005049
data:
  {"annotated_genes":["SJAG_04366","SJAG_01534","SJAG_01358","SJAG_03693","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87664,93078,104998,110045,113770],"is_not":false,"summary":null,"term":"GO:0005049"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear export signal (NES) on a cargo to be transported, to mediate transport of a the cargo through the nuclear pore, from the nuclear lumen to the cytoplasm. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:mah","Wikipedia:Nuclear_transport","GOC:vw","PMID:11743003","GOC:bf","GOC:pg","PMID:25802992","PMID:28713609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01358":null,"SJAG_01534":null,"SJAG_02661":null,"SJAG_03693":null,"SJAG_04366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140142"}],"interesting_parent_ids":["GO:0140104","GO:0140142","GO:0003674"],"is_obsolete":false,"name":"nuclear export signal receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-178215","GO:0008262"],"synonyms":[{"name":"NES receptor","type":"exact"},{"name":"exportin activity","type":"related"},{"name":"importin-alpha binding","type":"related"},{"name":"importin-alpha export receptor activity","type":"narrow"}],"termid":"GO:0005049","terms_by_termid":{"GO:0005049":null}}


id: GO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amines across synaptic vesicle membranes.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle amine transmembrane transporter activity (obsolete GO:0005430)","termid":"GO:0005430"}


id: GO:0070365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a hepatocyte. A hepatocyte is specialized epithelial cell that is organized into interconnected plates called lobules, and is the main structural component of the liver.","definition_xrefs":["PMID:7588884","CL:0000182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte differentiation","synonyms":[{"name":"liver cell differentiation","type":"exact"}],"termid":"GO:0070365"}


id: PBO:0066426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 1 Y-linked","termid":"PBO:0066426"}


id: PBO:0059873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 10","termid":"PBO:0059873"}


id: GO:1990186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of lymphatic vessels.","definition_xrefs":["PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"is_a","term_name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphatic vessel size","synonyms":[{"name":"regulation of collecting lymphatic vessel size","type":"narrow"}],"termid":"GO:1990186"}


id: GO:0019744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"hopanoid metabolic process","synonyms":[{"name":"hopanoid metabolism","type":"exact"}],"termid":"GO:0019744"}


id: PBO:0076004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal interaction molecule 2","termid":"PBO:0076004"}


id: PBO:0062295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 6 pseudogene","termid":"PBO:0062295"}


id: GO:1901651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic chromosome decondensation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic chromosome decondensation (obsolete GO:1901651)","termid":"GO:1901651"}


id: GO:2000802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion to mesenchymal transition involved in heart valve formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140051"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:2000800"},{"relation_name":"positively_regulates","term_name":"endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:0003199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"positive regulation of endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:2000802"}


id: GO:0140210
data:
  {"annotated_genes":["SJAG_03540","SJAG_02761","SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96942,100447,104792,115167],"is_not":false,"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to the kinetochore along a microtubule.","definition_xrefs":["PMID:25472718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140210","terms_by_termid":{"GO:0140210":null}}


id: PBO:0051523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor accessory protein like 1","termid":"PBO:0051523"}


id: GO:0006901
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391","SJAG_00284","SJAG_00906","SJAG_04615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92090],"is_not":false,"summary":null,"term":"GO:0006901"},{"annotations":[89798,114247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048205"},{"annotations":[105260,106646],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"A protein coat is added to the vesicle to form the proper shape of the vesicle and to target the vesicle for transport to its destination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"vesicle budding from membrane","termid":"GO:0006900"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00906":null,"SJAG_03268":null,"SJAG_04391":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle coating","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat assembly","type":"broad"}],"termid":"GO:0006901","terms_by_termid":{"GO:0003400":null,"GO:0006901":null,"GO:0048205":null}}


id: PBO:0071395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 1","termid":"PBO:0071395"}


id: FYPO:0006476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the onset of anaphase of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased duration of mitotic M phase","termid":"FYPO:0006490"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"premature mitotic metaphase/anaphase transition","synonyms":[{"name":"advanced mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"decreased duration of metaphase during mitosis","type":"related"},{"name":"decreased duration of mitotic metaphase","type":"related"},{"name":"premature cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"premature cell cycle progression through mitotic metaphase/anaphase transition","type":"exact"},{"name":"premature metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"premature mitotic metaphase/anaphase phase transition","type":"exact"},{"name":"premature mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"premature onset of mitotic anaphase","type":"exact"}],"termid":"FYPO:0006476"}


id: PBO:0084810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; localized to the mitochondrial outer membrane","termid":"PBO:0084810"}


id: PBO:0091577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by porcine CFL1","termid":"PBO:0091577"}


id: GO:0072329
data:
  {"annotated_genes":["SJAG_00633","SJAG_00281","SJAG_03852","SJAG_00706","SJAG_02763","SJAG_03804","SJAG_04570","SJAG_01432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108100,94757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"},{"annotations":[108357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[88037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[97582,101615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[108293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[110270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_00633":null,"SJAG_00706":null,"SJAG_01432":null,"SJAG_02763":null,"SJAG_03804":null,"SJAG_03852":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"monocarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072329","terms_by_termid":{"GO:0001561":null,"GO:0009062":null,"GO:0009436":null,"GO:0042758":null,"GO:0046177":null,"GO:1903457":null}}


id: GO:0061646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate secretion in response to membrane depolarization, where glutamate acts as a neurotransmitter.","definition_xrefs":["GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"is_a","term_name":"positive regulation of glutamate secretion, neurotransmission","termid":"GO:1903296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization","termid":"GO:0061646"}


id: GO:0022848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Selectively enables the transmembrane transfer of a cation by a channel that opens upon binding acetylcholine.","definition_xrefs":["PMID:2466967","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","termid":"GO:1904315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0038023","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"acetylcholine-gated monoatomic cation-selective channel activity","secondary_identifiers":["GO:0004889","GO:0016904"],"synonyms":[{"name":"acetylcholine-activated cation-selective channel activity","type":"exact"},{"name":"acetylcholine-gated cation channel activity","type":"exact"},{"name":"acetylcholine-gated cation-selective channel activity","type":"broad"},{"name":"ionotropic acetylcholine receptor activity","type":"exact"},{"name":"nAChR","type":"exact"},{"name":"nicotinergic acetylcholine receptor activity","type":"exact"},{"name":"nicotinic acetylcholine-activated cation-selective channel activity","type":"exact"}],"termid":"GO:0022848"}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: GO:0080020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving coenzyme A.","definition_xrefs":["PMID:18621975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"coenzyme A biosynthetic process","termid":"GO:0015937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"regulation of coenzyme A biosynthetic process","termid":"GO:0080020"}


id: PBO:0063428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 2","termid":"PBO:0063428"}


id: GO:0007557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"regulation of juvenile hormone anabolism","type":"exact"},{"name":"regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"regulation of juvenile hormone formation","type":"exact"},{"name":"regulation of juvenile hormone synthesis","type":"exact"}],"termid":"GO:0007557"}


id: GO:1901921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain that is involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:TermGenie","PMID:10594013"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex (obsolete GO:1901921)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex","type":"exact"}],"termid":"GO:1901921"}


id: SO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal_peptide is a short region of the peptide located at the N-terminus that directs the protein to be secreted or part of membrane components.","direct_ancestors":[{"relation_name":"derives_from","term_name":"signal_peptide_region_of_CDS","termid":"SO:0002251"},{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"},{"relation_name":"part_of","term_name":"propeptide","termid":"SO:0001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"signal_peptide","secondary_identifiers":["http://en.wikipedia.org/wiki/Signal_peptide","BS:00159"],"synonyms":[{"name":"INSDC_feature:sig_peptide","type":"exact"},{"name":"signal","type":"related"},{"name":"signal peptide","type":"exact"},{"name":"signal peptide coding sequence","type":"exact"}],"termid":"SO:0000418"}


id: PBO:0067767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 67","termid":"PBO:0067767"}


id: PBO:0091546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, expressed during meiotic cell cycle","termid":"PBO:0091546"}


id: PBO:0066910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 211","termid":"PBO:0066910"}


id: GO:0015643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a toxic substance, a poisonous substance that causes damage to biological systems.","definition_xrefs":["GOC:pr","GOC:curators","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"toxic substance binding","synonyms":[{"name":"antitoxin activity","type":"related"},{"name":"lipoprotein antitoxin","type":"related"}],"termid":"GO:0015643"}


id: PBO:0081704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 625","termid":"PBO:0081704"}


id: PBO:0055395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2825","termid":"PBO:0055395"}


id: PBO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 3","termid":"PBO:0071747"}


id: GO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","secondary_identifiers":["EC:1.10.1.-"],"termid":"GO:0016680"}


id: PBO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 2","termid":"PBO:0046302"}


id: PBO:0031666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_modification_during_vegetative_growth","termid":"PBO:0031666"}


id: GO:0033042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble umami compounds to initiate a change in cell activity. These receptors are responsible for the sense of umami taste, the savory taste of meats and other foods that are rich in glutamates.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPCR taste receptor activity","termid":"GO:0090681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"umami taste receptor activity","termid":"GO:0033042"}


id: PBO:0057652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245a","termid":"PBO:0057652"}


id: GO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host cell wall (obsolete GO:0052020)","synonyms":[{"name":"metabolism of host cell wall by organism","type":"exact"}],"termid":"GO:0052020"}


id: PBO:0076602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D22A divergent transcript","termid":"PBO:0076602"}


id: GO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity involved in conjugation with cellular fusion (obsolete GO:0071511)","synonyms":[{"name":"conjugation with cellular fusion, inactivation of MAPK activity","type":"exact"},{"name":"conjugation with cellular fusion, termination of MAPK activity","type":"exact"},{"name":"inactivation of MAPK activity involved in mating response","type":"related"},{"name":"termination of MAPK activity during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0071511"}


id: PBO:0051187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR15-7 (pseudogene)","termid":"PBO:0051187"}


id: GO:2000145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell motility.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell motility","synonyms":[{"name":"regulation of cell locomotion","type":"exact"},{"name":"regulation of cell movement","type":"related"},{"name":"regulation of movement of a cell","type":"exact"}],"termid":"GO:2000145"}


id: PBO:0059643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 9","termid":"PBO:0059643"}


id: PBO:0078210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-3","termid":"PBO:0078210"}


id: GO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.","definition_xrefs":["PMID:6405378","GOC:mtg_muscle","ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"costamere","secondary_identifiers":["Wikipedia:Costamere"],"termid":"GO:0043034"}


id: PBO:0067461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 586, pseudogene","termid":"PBO:0067461"}


id: GO:0021619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the hypoglossal nerve to attain its fully functional state. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"hypoglossal nerve development","termid":"GO:0021566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve maturation","synonyms":[{"name":"CN XII maturation","type":"related"}],"termid":"GO:0021619"}


id: GO:0035019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["ISBN:0582227089","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell population maintenance","termid":"GO:0035019"}


id: PATO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosceles triangular","termid":"PATO:0002307"}


id: FYPO:0005506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitochondrial transport mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mitochondrial transport mRNAs are transcribed from genes whose products are involved in transport to or from the mitochondrion.","definition_xrefs":["PMID:23236291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of mitochondrial transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of mitochondrial transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mitochondrial transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mitochondrial transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0005506"}


id: PBO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 subunit alpha' interacting protein","termid":"PBO:0044026"}


id: GO:0140067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The butyrylation of a lysine residue in a protein. Butyryl is the univalent radical C3H7COO- derived from butyric acid.","definition_xrefs":["PMID:27105113","Wikipedia:butyryl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine butyrylation","termid":"GO:0140067"}


id: GO:0031053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.","definition_xrefs":["GOC:sl","PMID:25799998","PMID:15211354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"primary miRNA processing","secondary_identifiers":["GO:1990744","GO:1990729"],"synonyms":[{"name":"pri-miRNA processing","type":"exact"},{"name":"primary miRNA methylation","type":"narrow"},{"name":"primary miRNA modification","type":"exact"},{"name":"primary microRNA processing","type":"exact"}],"termid":"GO:0031053"}


id: PBO:0086872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; localizes to puncta in the cortical ER; probable role in retrograde transport of sterols from the plasma membrane to the ER; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; contains GRAM, StART-like (VASt) and two PH-like domains","termid":"PBO:0086872"}


id: GO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense.","definition_xrefs":["UniProtKB-KW:KW-1090","GOC:add","GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host innate immune response (obsolete GO:0039503)","synonyms":[{"name":"inhibition of host innate immune response by virus","type":"exact"},{"name":"negative regulation by virus of host innate immune response","type":"exact"},{"name":"negative regulation by virus of host innate immunity","type":"exact"},{"name":"suppression by virus of host innate immunity","type":"exact"}],"termid":"GO:0039503"}


id: PBO:0074449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival of motor neuron 1, telomeric","termid":"PBO:0074449"}


id: GO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tendon over time, from its formation to the mature structure. A tendon is a fibrous, strong, connective tissue that connects muscle to bone or integument and is capable of withstanding tension. Tendons and muscles work together to exert a pulling force.","definition_xrefs":["GOC:yaf","PMID:21412429","UBERON:0000043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon development","synonyms":[{"name":"sinew development","type":"related"}],"termid":"GO:0035989"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: GO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of one or more iodine atoms to an amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein iodination (obsolete GO:0018077)","synonyms":[{"name":"protein amino acid iodination","type":"exact"}],"termid":"GO:0018077"}


id: GO:0071424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in rRNA + S-adenosyl-L-methionine = an N(4)-methylcytidine in rRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:19965768","RHEA:62520","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"rRNA (cytosine-N4-)-methyltransferase activity","termid":"GO:0071424"}


id: PBO:0062477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily H member 1 pseudogene","termid":"PBO:0062477"}


id: GO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate biosynthetic process","synonyms":[{"name":"glycerol-3-phosphate anabolism","type":"exact"},{"name":"glycerol-3-phosphate biosynthesis","type":"exact"},{"name":"glycerol-3-phosphate formation","type":"exact"},{"name":"glycerol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046167"}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: PBO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, predicted histone demethylase Lid2","termid":"PBO:0004239"}


id: PBO:0065827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6B, member RAS oncogene family","termid":"PBO:0065827"}


id: GO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagina development","termid":"GO:0060068"}


id: PBO:0068998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 242, pseudogene","termid":"PBO:0068998"}


id: FYPO:0002858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-beta-D-glucan measured at the cell tip is greater than normal.","definition_xrefs":["PMID:17581129","PMID:21652630","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased (1->3)-beta-D-glucan level","termid":"FYPO:0007949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased (1->3)-beta-D-glucan level at cell tip","synonyms":[{"name":"increased (1,3)beta-D-glucan level at cell tip","type":"exact"},{"name":"increased (1->3)-beta-D-glucan accumulation at cell tip","type":"related"},{"name":"increased (1->3)-beta-D-glucan level at cell end","type":"exact"},{"name":"increased (1->3)-beta-D-glucan level at cell tip during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-beta-D-glucan level at cell tip during vegetative growth","type":"exact"},{"name":"increased 1,3-beta-D-glucan level at cell tip","type":"exact"},{"name":"increased level of (1->3)-beta-D-glucan at cell tip","type":"exact"},{"name":"septal material present at cell tip","type":"related"},{"name":"septum material present at cell tip","type":"related"}],"termid":"FYPO:0002858"}


id: PBO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 5","termid":"PBO:0042452"}


id: PR:P04913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- htb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P04913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.09","synonyms":[{"name":"H2B.1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-htb1","type":"exact"}],"termid":"PR:P04913"}


id: GO:2000120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"positively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium-dependent phosphate transport","termid":"GO:2000120"}


id: PBO:0083210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPL33A/YPL143W, a component of the large (60S) ribosomal subunit","termid":"PBO:0083210"}


id: GO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microtubule organizing center, a region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule organizing center part (obsolete GO:0044450)","synonyms":[{"name":"MTOC component","type":"exact"},{"name":"microtubule organizing centre component","type":"exact"}],"termid":"GO:0044450"}


id: PBO:0088912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIa","termid":"PBO:0088912"}


id: PBO:0055164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2584","termid":"PBO:0055164"}


id: PBO:0030079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import_during_nitrogen_starvation","termid":"PBO:0030079"}


id: FYPO:0004876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) is decreased when the cell is subject to heat shock, at specific genes that are transcriptionally up-regulated during the heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at heat-shock-inducible genes during cellular response to heat shock","synonyms":[{"name":"decreased chromatin binding at heat shock inducible genes during cellular response to heat shock","type":"exact"},{"name":"reduced chromatin binding at heat-shock-inducible genes during cellular response to heat shock","type":"exact"}],"termid":"FYPO:0004876"}


id: MOD:00640
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-N-biotinylaminohexyl isopropyl phosphorofluoridate","synonyms":[{"name":"6-N-biotinylaminohexyl isopropyl phosphate","type":"related"},{"name":"Can-FP-biotin","type":"related"}],"termid":"MOD:00640"}


id: GO:0075082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075082)","termid":"GO:0075082"}


id: PBO:0078325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRDN antisense RNA 1","termid":"PBO:0078325"}


id: PBO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 5","termid":"PBO:0070950"}


id: FYPO:0000001
data:
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phenotype","type":"exact"}],"termid":"FYPO:0000001","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000015":null,"FYECO:0000078":null,"FYECO:0000081":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000272":null,"FYECO:0000314":null,"FYECO:0000315":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000079":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000118":null,"FYPO:0000124":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000245":null,"FYPO:0000271":null,"FYPO:0000280":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000579":null,"FYPO:0000584":null,"FYPO:0000588":null,"FYPO:0000590":null,"FYPO:0000595":null,"FYPO:0000596":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000644":null,"FYPO:0000648":null,"FYPO:0000671":null,"FYPO:0000674":null,"FYPO:0000708":null,"FYPO:0000714":null,"FYPO:0000719":null,"FYPO:0000726":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000747":null,"FYPO:0000760":null,"FYPO:0000815":null,"FYPO:0000841":null,"FYPO:0001007":null,"FYPO:0001012":null,"FYPO:0001038":null,"FYPO:0001122":null,"FYPO:0001132":null,"FYPO:0001214":null,"FYPO:0001234":null,"FYPO:0001327":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001387":null,"FYPO:0001408":null,"FYPO:0001440":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001690":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002058":null,"FYPO:0002061":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003535":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004165":null,"FYPO:0004205":null,"FYPO:0004293":null,"FYPO:0004295":null,"FYPO:0004318":null,"FYPO:0004481":null,"FYPO:0004573":null,"FYPO:0004683":null,"FYPO:0004693":null,"FYPO:0004695":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005152":null,"FYPO:0005231":null,"FYPO:0005503":null,"FYPO:0005705":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006616":null,"FYPO:0006945":null,"FYPO:0006989":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007521":null,"FYPO:0007522":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007773":null,"FYPO:0007774":null,"FYPO:0007775":null,"FYPO:0007776":null,"FYPO:0007777":null,"FYPO:0007778":null,"FYPO:0007779":null,"FYPO:0007780":null,"FYPO:0007782":null,"FYPO:0007783":null,"FYPO:0007789":null,"FYPO:0007790":null,"FYPO:0007801":null,"FYPO:0007824":null,"FYPO:0008029":null,"FYPO:0008031":null,"FYPO:0008046":null,"FYPO:0009111":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: FYPO:0007946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein ubiquitination","termid":"FYPO:0007946"}


id: GO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus during erythrocyte maturation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"enucleate erythrocyte maturation","termid":"GO:0043354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte enucleation","termid":"GO:0043131"}


id: PBO:0066247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 3","termid":"PBO:0066247"}


id: GO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylquinolin-4(1H)-one + H+ + O2 = N-acetylanthranilate + CO.","definition_xrefs":["EC:1.13.11.48","RHEA:21572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxy-2-methylquinolin-4-one 2,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05720","MetaCyc:1.13.11.48-RXN"],"synonyms":[{"name":"(1H)-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase activity","type":"related"},{"name":"1H-3-hydroxy-4-oxo quinaldine 2,4-dioxygenase activity","type":"exact"},{"name":"1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase activity","type":"exact"},{"name":"3-hydroxy-2-methyl-1H-quinolin-4-one 2,4-dioxygenase (CO-forming)","type":"related"},{"name":"3-hydroxy-2-methyl-quinolin-4-one 2,4-dioxygenase activity","type":"exact"}],"termid":"GO:0050586"}


id: PBO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 2","termid":"PBO:0072675"}


id: GO:1902742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in anatomical structure development.","definition_xrefs":["GOC:pg","GOC:mtg_apoptosis","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in development","synonyms":[{"name":"activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"apoptosis involved in anatomical structure development","type":"narrow"},{"name":"apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic process involved in anatomical structure development","type":"exact"},{"name":"apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1902742"}


id: GO:0010606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["GOC:krc","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic mRNA processing body assembly","termid":"GO:0010603"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"P-body assembly","termid":"GO:0033962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cytoplasmic mRNA processing body assembly","termid":"GO:0010606"}


id: PBO:0035893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_modification_during_vegetative_growth","termid":"PBO:0035893"}


id: GO:1904677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell division.","definition_xrefs":["GOC:TermGenie","PMID:19409607","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell division","termid":"GO:1904675"},{"relation_name":"positively_regulates","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell division","synonyms":[{"name":"activation of somatic stem cell division","type":"narrow"},{"name":"activation of somatic stem cell renewal","type":"narrow"},{"name":"positive regulation of somatic stem cell renewal","type":"exact"},{"name":"up regulation of somatic stem cell division","type":"exact"},{"name":"up regulation of somatic stem cell renewal","type":"exact"},{"name":"up-regulation of somatic stem cell division","type":"exact"},{"name":"up-regulation of somatic stem cell renewal","type":"exact"},{"name":"upregulation of somatic stem cell division","type":"exact"},{"name":"upregulation of somatic stem cell renewal","type":"exact"}],"termid":"GO:1904677"}


id: GO:1905097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of guanyl-nucleotide exchange factor activity.","definition_xrefs":["PMID:20484009","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTPase activity","termid":"GO:0043087"},{"relation_name":"is_a","term_name":"regulation of GTP binding","termid":"GO:1904424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of guanyl-nucleotide exchange factor activity","synonyms":[{"name":"regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"regulation of GDS","type":"exact"},{"name":"regulation of GEF","type":"exact"},{"name":"regulation of GNRP","type":"narrow"},{"name":"regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"regulation of guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:1905097"}


id: GO:0009177
data:
  {"annotated_genes":["SJAG_04627","SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104905,85962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[104906,95558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009157"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009177","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: PBO:0045913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 9","termid":"PBO:0045913"}


id: PBO:0029820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_germinated_spores_with_elongated_germ_tubes_(obsolete_FYPO:0002417)","termid":"PBO:0029820"}


id: PBO:0081336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 135","termid":"PBO:0081336"}


id: GO:0008866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NAD+ = D-fructuronate + H+ + NADH.","definition_xrefs":["EC:1.1.1.57","RHEA:15729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fructuronate reductase activity","secondary_identifiers":["KEGG_REACTION:R02454","MetaCyc:MANNONOXIDOREDUCT-RXN"],"synonyms":[{"name":"D-mannonate dehydrogenase activity","type":"related"},{"name":"D-mannonate oxidoreductase activity","type":"related"},{"name":"D-mannonate:NAD oxidoreductase activity","type":"related"},{"name":"D-mannonate:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"mannonate oxidoreductase activity","type":"related"},{"name":"mannonic dehydrogenase activity","type":"related"}],"termid":"GO:0008866"}


id: GO:0102070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 18-hydroxyoleate + a lipid hydroperoxide = 9,10-epoxy-18-hydroxystearate + a lipid alcohol.","definition_xrefs":["PMID:468835","PMID:14535881","GOC:pz","PMID:12226220"],"gene_count":0,"genotype_count":0,"name":"obsolete 18-hydroxyoleate peroxygenase activity (obsolete GO:0102070)","termid":"GO:0102070"}


id: GO:0033116
data:
  {"annotated_genes":["SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103554],"is_not":false,"summary":null,"term":"GO:0033116"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.","definition_xrefs":["GOC:pr","PMID:16723730","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0033116","terms_by_termid":{"GO:0033116":null}}


id: FYPO:0005709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"normal protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"normal protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"normal protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0005709"}


id: GO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the stable binding of a haptoglobin to hemoglobin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"haptoglobin-hemoglobin complex","termid":"GO:0031838"}


id: PBO:0047256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 241 member A","termid":"PBO:0047256"}


id: PBO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip Elongation Aberrant","termid":"PBO:0001939"}


id: PBO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, congenital disorders of glycosylation","termid":"PBO:0014268"}


id: PBO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 13","termid":"PBO:0046632"}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["EC:7.5.2.1","MetaCyc:ABC-16-RXN"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: PR:P78750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.06","synonyms":[{"name":"Spom972h-utp18","type":"exact"},{"name":"U3 snoRNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78750"}


id: GO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading up to expression of the pre-B cell receptor on the surface of pre-B cells, starting with the recombination of an immunuglobulin heavy chain locus, including expression of the surrogate light chain, the association of the surrogate light chain with the heavy chain, and expression of the complete pre-B cell receptor on the cell surface. pre-B cell receptor expression is a key checkpoint in the transition of pro-B cell to pre-B cell.","definition_xrefs":["PMID:9834086","GOC:jal","PMID:22949502","PMID:15263090","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"pre-B cell differentiation","termid":"GO:0002329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell receptor expression","termid":"GO:0002330"}


id: FYPO:0001996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect when the cell is subject to nitrogen starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during nitrogen starvation","synonyms":[{"name":"RNA absent from cell during nitrogen depletion","type":"exact"},{"name":"RNA absent from cell during nitrogen deprivation","type":"exact"},{"name":"transcripts absent from cell during nitrogen starvation","type":"exact"},{"name":"undetectable cellular RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001996"}


id: PBO:0086425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR419W is not an essential gene","termid":"PBO:0086425"}


id: PR:Q9C1X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP32A8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1X5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase P32A8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.02","synonyms":[{"name":"Spom972h-SPAP32A8.02","type":"exact"}],"termid":"PR:Q9C1X5"}


id: MOD:00988
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a bromine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated residue","termid":"MOD:00754"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated tyrosine","synonyms":[{"name":"BrTyr","type":"exact"}],"termid":"MOD:00988"}


id: PBO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-21","termid":"PBO:0051143"}


id: FYPO:0000701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which caffeine does not override the DNA damage checkpoint (as it does in wild type cells), allowing mitotic cell cycle arrest to occur.","definition_xrefs":["PomBase:mah","PMID:10224243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to caffeine","termid":"FYPO:0000207"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished DNA damage checkpoint override in response to caffeine","synonyms":[{"name":"DNA damage checkpoint override in response to caffeine abolished","type":"exact"},{"name":"DNA damage checkpoint override in response to caffeine abolished during vegetative growth","type":"exact"},{"name":"abolished DNA damage checkpoint override in response to caffeine during mitotic cell cycle","type":"related"},{"name":"caffeine-mediated DNA damage checkpoint override abolished","type":"exact"}],"termid":"FYPO:0000701"}


id: PBO:0056641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 1","termid":"PBO:0056641"}


id: PBO:0043362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 3","termid":"PBO:0043362"}


id: PBO:0072164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 1","termid":"PBO:0072164"}


id: PBO:0031380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell","termid":"PBO:0031380"}


id: GO:1990663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + fumarate = orotate + succinate.","definition_xrefs":["PMID:1409592","RHEA:30059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (fumarate) activity","secondary_identifiers":["EC:1.3.98.1"],"termid":"GO:1990663"}


id: GO:0033180
data:
  {"annotated_genes":["SJAG_00136","SJAG_04955","SJAG_01817","SJAG_01447","SJAG_04015","SJAG_01471","SJAG_01397","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84626,95482,106398,96569,115226,98188,93183,99219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.","definition_xrefs":["PMID:16449553","GOC:mah","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033180","terms_by_termid":{"GO:0000221":null}}


id: GO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09584"],"gene_count":0,"genotype_count":0,"name":"obsolete N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating) (obsolete GO:0090491)","termid":"GO:0090491"}


id: PBO:0077071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THY1 antisense RNA 1","termid":"PBO:0077071"}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: PBO:0088855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD-finger protein Cph2","termid":"PBO:0088855"}


id: GO:0016701
data:
  {"annotated_genes":["SJAG_03225","SJAG_00309","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101278],"is_not":false,"summary":null,"term":"GO:0016701"},{"annotations":[108948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[108949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[86419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor.","definition_xrefs":["EC:1.13.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00519":null,"SJAG_03225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"narrow"},{"name":"oxygenase","type":"broad"}],"termid":"GO:0016701","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016701":null,"GO:0102672":null}}


id: FYPO:0004988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels that normally vary over the course of the mitotic cell cycle do not vary, or change in a pattern different from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:15302827","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abnormal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abnormal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"abnormal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004988"}


id: GO:0097317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a biotic stimulus. An example of this is Candida albicans forming invasive filaments in agar medium in response to a serum stimulus.","definition_xrefs":["PMID:18679170","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to biotic stimulus","termid":"GO:0097317"}


id: PBO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase like 1","termid":"PBO:0051709"}


id: PBO:0087663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); forms a 1:1 subcomplex with Pam18p and inhibits its cochaperone activity; contains a J-like domain","termid":"PBO:0087663"}


id: PBO:0076199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 8","termid":"PBO:0076199"}


id: GO:0016663
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004846"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.7.3.-"],"termid":"GO:0016663","terms_by_termid":{"GO:0004846":null}}


id: GO:0014719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change of a skeletal muscle satellite cell from a mitotically quiescent to a mitotically active state following exposure to some activating factor such as a cellular or soluble ligand. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["GOC:mtg_muscle","PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell activation","termid":"GO:0014719"}


id: PBO:0085557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing an N-terminal epsin-like domain; involved in clathrin recruitment and traffic between the Golgi and endosomes; associates with the clathrin adaptor Gga2p, clathrin adaptor complex AP-1, and clathrin","termid":"PBO:0085557"}


id: GO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low humidity","termid":"GO:0090547"}


id: PBO:0089099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 substrate adaptor, WD repeat protein, Raptor homolog Mip1","termid":"PBO:0089099"}


id: GO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a platelet or group of platelets.","definition_xrefs":["PMID:9117517","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"histamine secretion by platelet","termid":"GO:0002555"}


id: GO:0055021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"}


id: GO:2000843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of testosterone secretion","termid":"GO:2000843"}


id: GO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in contraction of the apical end of a polarized columnar epithelial cell, contributing to formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["PMID:28495958","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction involved in gastrulation","termid":"GO:0003384"},{"relation_name":"part_of","term_name":"ventral furrow formation","termid":"GO:0007370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}


id: GO:0070139
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86857,102657],"is_not":false,"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within the small conjugating protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein-specific endopeptidase activity","termid":"GO:0070137"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0008233","GO:0140096"],"is_obsolete":false,"name":"SUMO-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2990842","Reactome:R-HSA-2993763","Reactome:R-HSA-2990840"],"termid":"GO:0070139","terms_by_termid":{"GO:0070139":null}}


id: PATO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000589 absolute thickness value (obsolete PATO:0000589)","termid":"PATO:0000589"}


id: GO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of a trichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast fate specification","termid":"GO:0010057"}


id: PBO:0082433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bridging factor involved in ER-associated protein degradation (ERAD); bridges the cytosolic Cdc48p-Npl1p-Ufd1p ATPase complex and the membrane associated Ssm4p and Hrd1p ubiquitin ligase complexes; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain; redistributes from the ER to lipid droplets during the diauxic shift and stationary phase; required for the maintenance of lipid homeostasis; required for mitochondrial protein translocation-associated degradation","termid":"PBO:0082433"}


id: PR:Q53EK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A non-structural maintenance of chromosomes element 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20973:SF0","OMA:SCHPO04590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosomes element 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.05","secondary_identifiers":["UniProtKB:Q53EK2"],"synonyms":[{"name":"Spom972h-NSMCE1","type":"exact"},{"name":"non-SMC element 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q53EK2"}


id: PBO:0076462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase 1 pseudogene 1","termid":"PBO:0076462"}


id: GO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A 90 degree-rotation of the optic cup resulting in its alignment with the anterior-posterior body axis.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior rotation of the optic cup","termid":"GO:0003410"}


id: PBO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maturin, neural progenitor differentiation regulator homolog","termid":"PBO:0060170"}


id: GO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of natural killer cells.","definition_xrefs":["GOC:jal","PMID:16546094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell tolerance induction","synonyms":[{"name":"NK cell tolerance induction","type":"exact"}],"termid":"GO:0002519"}


id: GO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnetism","synonyms":[{"name":"response to magnetic stimulus","type":"exact"}],"termid":"GO:0071000"}


id: PBO:0044080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 2","termid":"PBO:0044080"}


id: PR:Q9HDU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.06c","synonyms":[{"name":"Spom972h-SPBPB2B2.06c","type":"exact"}],"termid":"PR:Q9HDU9"}


id: GO:0004581
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107611],"is_not":false,"summary":null,"term":"GO:0004581"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate.","definition_xrefs":["EC:2.4.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15401","Reactome:R-HSA-446214","MetaCyc:2.4.1.117-RXN"],"synonyms":[{"name":"UDP-glucose dolichyl-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichol phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolicholphosphoryl glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl monophosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"polyprenyl phosphate:UDP-D-glucose glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-dolichol glucosyltransferase activity","type":"related"}],"termid":"GO:0004581","terms_by_termid":{"GO:0004581":null}}


id: GO:0006166
data:
  {"annotated_genes":["SJAG_01070","SJAG_06634","SJAG_01859","SJAG_00134","SJAG_03096","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86363,90108,90326,112349],"is_not":false,"summary":null,"term":"GO:0006166"},{"annotations":[113350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[105027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P121-PWY"],"termid":"GO:0006166","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null}}


id: MOD:01036
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01181. Remap to MOD:01181.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01036 O-methyl aspartyl (obsolete MOD:01036)","termid":"MOD:01036"}


id: GO:0031330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular catabolic process (obsolete GO:0031330)","synonyms":[{"name":"down regulation of cellular catabolic process","type":"exact"},{"name":"down-regulation of cellular catabolic process","type":"exact"},{"name":"downregulation of cellular catabolic process","type":"exact"},{"name":"inhibition of cellular catabolic process","type":"narrow"},{"name":"negative regulation of cellular breakdown","type":"exact"},{"name":"negative regulation of cellular catabolism","type":"exact"},{"name":"negative regulation of cellular degradation","type":"exact"}],"termid":"GO:0031330"}


id: FYPO:0004992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during interphase of the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during meiotic interphase","synonyms":[{"name":"decreased protein accumulation during meiotic interphase","type":"related"},{"name":"decreased protein level during interphase of meiotic cell cycle","type":"exact"},{"name":"reduced protein level during meiotic interphase","type":"exact"}],"termid":"FYPO:0004992"}


id: PR:O14063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.03c","synonyms":[{"name":"Spom972h-cut15","type":"exact"},{"name":"cell untimely torn protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine-rich RNA polymerase I suppressor protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14063"}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: PBO:0049198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin-related inter-fiber protein","termid":"PBO:0049198"}


id: PR:Q10062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoporphyrinogen oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00102","PANTHER:PTHR10742:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.07c","secondary_identifiers":["UniProtKB:Q10062"],"synonyms":[{"name":"PPO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPOX","type":"exact"}],"termid":"PR:Q10062"}


id: PR:A6X974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.08c","synonyms":[{"name":"Spom972h-SPAC8E11.08c","type":"exact"}],"termid":"PR:A6X974"}


id: GO:0030388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate metabolic process","synonyms":[{"name":"fructose 1,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0030388"}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: FYPO:0002625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to parts of the chromosome containing ribosomal DNA is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to rDNA","synonyms":[{"name":"normal protein localisation to rDNA","type":"exact"},{"name":"normal protein localization to rDNA during mitotic cell cycle","type":"related"},{"name":"normal protein localization to rDNA during vegetative growth","type":"exact"},{"name":"normal protein localization to ribosomal DNA","type":"exact"}],"termid":"FYPO:0002625"}


id: PBO:0040125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 11","termid":"PBO:0040125"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:imk","PMID:17161604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: PBO:0042331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD55 molecule (Cromer blood group)","termid":"PBO:0042331"}


id: PBO:0067179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 237, pseudogene","termid":"PBO:0067179"}


id: PBO:0079454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 7","termid":"PBO:0079454"}


id: PBO:0011132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 6","termid":"PBO:0011132"}


id: GO:0070878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a primary microRNA (pri-miRNA) transcript, an RNA molecule that is processed into a short hairpin-shaped structure called a pre-miRNA and finally into a functional miRNA. Both double-stranded and single-stranded regions of a pri-miRNA are required for binding.","definition_xrefs":["GOC:sl","PMID:15531877","PMID:15574589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"primary miRNA binding","synonyms":[{"name":"pri-miRNA binding","type":"exact"},{"name":"primary microRNA binding","type":"exact"}],"termid":"GO:0070878"}


id: PBO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 24","termid":"PBO:0044340"}


id: PBO:0090429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) regulatory subunit","termid":"PBO:0090429"}


id: PR:O94489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.08","synonyms":[{"name":"EF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef3","type":"exact"}],"termid":"PR:O94489"}


id: PBO:0000637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf30","termid":"PBO:0000637"}


id: PBO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-24 (pseudogene)","termid":"PBO:0051439"}


id: PBO:0091476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Mvp1","termid":"PBO:0091476"}


id: PBO:0070788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 18","termid":"PBO:0070788"}


id: PBO:0091630
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteomics data indicates an N-terminally extended version of this gene which would contain an upstream stop codon and a frameshift","termid":"PBO:0091630"}


id: GO:0099056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic membrane (obsolete GO:0099056)","synonyms":[{"name":"integral component of presynaptic plasma membrane","type":"exact"}],"termid":"GO:0099056"}


id: PBO:0082992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper-zinc superoxide dismutase; detoxifies superoxide; stabilizes Yck1p and Yck2p kinases in glucose to repress respiration; phosphorylated by Dun1p, enters nucleus under oxidative stress to promote transcription of stress response genes; human ortholog SOD1 implicated in ALS complements a null allele; abundance increases under DNA replication stress and during exposure to boric acid; localization to mitochondrial intermembrane space is modulated by MICOS complex","termid":"PBO:0082992"}


id: PBO:0057329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520d","termid":"PBO:0057329"}


id: GO:0044440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an endosome, a membrane-bounded organelle to which materials ingested by endocytosis are delivered.","definition_xrefs":["PMID:19696797","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endosomal part (obsolete GO:0044440)","synonyms":[{"name":"endosomal subcomponent","type":"exact"},{"name":"endosome component","type":"exact"}],"termid":"GO:0044440"}


id: FYPO:0005127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from late meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of late meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of late meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of late meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005127"}


id: GO:0042720
data:
  {"annotated_genes":["SJAG_02809","SJAG_03648"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104600,105720],"is_not":false,"summary":null,"term":"GO:0042720"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane, consisting of at least two subunits, involved in processing of both nuclear- and mitochondrially-encoded proteins targeted to the intermembrane space.","definition_xrefs":["PMID:12191769","PMID:10821182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02809":null,"SJAG_03648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMP","type":"narrow"},{"name":"mitochondrion inner membrane peptidase complex","type":"exact"}],"termid":"GO:0042720","terms_by_termid":{"GO:0042720":null}}


id: MOD:01197
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-heptosyl-L-glutamine.","definition_xrefs":["Unimod:490#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-heptosyl-L-glutamine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01197"}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: PBO:0063564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine N-methyltransferase","termid":"PBO:0063564"}


id: GO:0001079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["PMID:19104072","GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001079"}


id: GO:0008842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + a purine nucleoside = monophosphate + a purine mononucleotide.","definition_xrefs":["EC:2.7.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"diphosphate-purine nucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.143-RXN"],"synonyms":[{"name":"diphosphate-dependent nucleoside kinase activity","type":"related"},{"name":"diphosphate:purine nucleoside phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent nucleoside kinase activity","type":"related"},{"name":"pyrophosphate-purine nucleoside kinase activity","type":"related"}],"termid":"GO:0008842"}


id: SO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_heptamer","synonyms":[{"name":"V heptamer","type":"exact"},{"name":"V-HEPTAMER","type":"exact"}],"termid":"SO:0000533"}


id: PATO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased object quality","termid":"PATO:0002303"}


id: PBO:0063181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 2 pseudogene 1","termid":"PBO:0063181"}


id: GO:1900837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"regulation of fumigaclavine C anabolism","type":"exact"},{"name":"regulation of fumigaclavine C biosynthesis","type":"exact"},{"name":"regulation of fumigaclavine C formation","type":"exact"},{"name":"regulation of fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900837"}


id: PBO:0089890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase/aldose 1-epimerase","termid":"PBO:0089890"}


id: GO:0102060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (-)-endo-alpha-bergamotene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"endo-alpha-bergamotene synthase activity","secondary_identifiers":["MetaCyc:RXN-10482","EC:4.2.3.54"],"synonyms":[{"name":"endo-alpha-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102060"}


id: PBO:0061521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P) dependent steroid dehydrogenase-like","termid":"PBO:0061521"}


id: PBO:0079020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 3-1","termid":"PBO:0079020"}


id: PR:O14192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C56E4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.03","synonyms":[{"name":"Spom972h-SPAC56E4.03","type":"exact"}],"termid":"PR:O14192"}


id: PBO:0029628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029628"}


id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["GOC:dph","EC:2.7.7.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: PBO:0076256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small vasohibin binding protein","termid":"PBO:0076256"}


id: GO:1903406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:8160880","GOC:mr","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"regulation of Na+,K+ pump","type":"related"},{"name":"regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"regulation of Na,K-pump","type":"related"},{"name":"regulation of sodium pump","type":"broad"},{"name":"regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"regulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903406"}


id: PBO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0003256"}


id: PBO:0050004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP zinc finger 2","termid":"PBO:0050004"}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: GO:0044301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of inferior olive neuron that projects to the cerebellar cortex, largely via the inferior cerebellar peduncle. They range in diameter from 1-3 um and are myelinated until they enter the granule cell layer. They give off collaterals to the deep cerebellar nuclei. They synapse extensively with the dendrites of Purkinje cells in the molecular layer, where each fiber branches repeatedly to climb along the Purkinje cell dendritic tree. Each Purkinje cell is innervated by only a single climbing fiber.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"climbing fiber","synonyms":[{"name":"climbing fibre","type":"exact"}],"termid":"GO:0044301"}


id: PBO:0044397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 58, pseudogene","termid":"PBO:0044397"}


id: PBO:0057267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 492","termid":"PBO:0057267"}


id: PBO:0079034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 3-1","termid":"PBO:0079034"}


id: PBO:0048759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 2","termid":"PBO:0048759"}


