# terms

id: PBO:0064905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, alpha","termid":"PBO:0064905"}


id: PBO:0071540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 5","termid":"PBO:0071540"}


id: PBO:0066097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 2","termid":"PBO:0066097"}


id: MOD:02039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen group with a amino group","direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminated residue","synonyms":[{"name":"AmRes","type":"exact"}],"termid":"MOD:02039"}


id: GO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber morphogenesis","synonyms":[{"name":"heart chamber morphogenesis","type":"exact"}],"termid":"GO:0003206"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GO_REF:0000058","PMID:24004945","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: PBO:0075104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 153","termid":"PBO:0075104"}


id: GO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanoate is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0006790","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanoate","termid":"GO:0000954"}


id: GO:0019003
data:
  {"annotated_genes":["SJAG_02374","SJAG_04666","SJAG_02605","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87438,88272,89004,107063],"is_not":false,"summary":null,"term":"GO:0019003"}]},"cv_name":"molecular_function","definition":"Binding to GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02374":null,"SJAG_02605":null,"SJAG_03453":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GDP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019003","terms_by_termid":{"GO:0019003":null}}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: PBO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin B1","termid":"PBO:0048926"}


id: PATO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its lacking few of the cellular characteristics which would allow it to be fully differentiated.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderately well differentiated","termid":"PATO:0002111"}


id: PBO:0058010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3936 host gene","termid":"PBO:0058010"}


id: PBO:0087048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L22A; required for translation of long 5' UTR of IME1 mRNA and meiotic entry; required for the oxidative stress response, pseudohyphal and invasive growth; homologous to mammalian ribosomal protein L22, no bacterial homolog; RPL22A has a paralog, RPL22B, that arose from the whole genome duplication","termid":"PBO:0087048"}


id: GO:1900145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:vk","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900145)","synonyms":[{"name":"regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900145"}


id: GO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide = (Z)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide.","definition_xrefs":["RHEA:21848","EC:5.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"furylfuramide isomerase activity","secondary_identifiers":["KEGG_REACTION:R04538","MetaCyc:FURYLFURAMIDE-ISOMERASE-RXN"],"synonyms":[{"name":"2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide cis-trans-isomerase activity","type":"related"}],"termid":"GO:0047907"}


id: PBO:0053934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1233","termid":"PBO:0053934"}


id: PBO:0113741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTNAP1 pseudogene 1","termid":"PBO:0113741"}


id: GO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on tricoumaroyl spermidine or any of its mono- or dicaffeoyl spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}


id: GO:0033591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-ascorbic acid","synonyms":[{"name":"response to L-ascorbate","type":"exact"},{"name":"response to ascorbic acid","type":"broad"},{"name":"response to vitamin C","type":"exact"}],"termid":"GO:0033591"}


id: PBO:0080381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog A","termid":"PBO:0080381"}


id: PBO:0080624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR70 pseudogene 1","termid":"PBO:0080624"}


id: PBO:0087333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specialized J-protein that functions in Fe-S cluster biogenesis; functions with Hsp70 in Fe-S cluster biogenesis in mitochondria; involved in iron metabolism; contains a J domain typical to J-type chaperones; localizes to the mitochondrial matrix","termid":"PBO:0087333"}


id: FYPO:0002218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with normal morphology (i.e. size, shape, and structure) that do not septate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, normal unseptated germ tube morphology (obsolete FYPO:0002218)","synonyms":[{"name":"inviable germinated spore population, normal unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0002218"}


id: GO:0030826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP biosynthetic process (obsolete GO:0030826)","synonyms":[{"name":"regulation of cGMP anabolism","type":"exact"},{"name":"regulation of cGMP biosynthesis","type":"exact"},{"name":"regulation of cGMP formation","type":"exact"},{"name":"regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030826"}


id: PBO:0050732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 18","termid":"PBO:0050732"}


id: PBO:0050570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hornerin","termid":"PBO:0050570"}


id: MOD:01665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-valine residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine.","definition_xrefs":["PubMed:20185759","RESID:AA0521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","synonyms":[{"name":"(2S)-2-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]amino-3-methylbutanoic acid","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with DNA; via amino nitrogen","type":"exact"},{"name":"DNA glycosylase valine Schiff base intermediate","type":"exact"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","type":"exact"}],"termid":"MOD:01665"}


id: FYPO:0000810
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116005,116007,115739,116000],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003973"},{"annotations":[116017,116018,115905,115740,116025,115898,116024,115897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[116068,116061,116064,116073,116076,116060],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115879],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus organization is abnormal. Nucleus organization results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["PomBase:mah","GO:0006997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01374":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":17,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nucleus organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_01374","SJAG_03940","SJAG_03891","SJAG_04284","SJAG_01906","SJAG_01242","SJAG_04464","SJAG_01745","SJAG_03892","SJAG_05207","SJAG_02763","SJAG_03449"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","nup132delta","man1delta","alx1delta","nem1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","lem2delta","vps4delta","nem2delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","vps32delta","ned1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal nuclear organization","type":"exact"},{"name":"abnormal nucleus organisation","type":"exact"},{"name":"abnormal nucleus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000810","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0082067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-adenine DNA glycosylase; initiates base excision repair (BER) by removing damaged bases to create abasic sites that are subsequently repaired; expansion of BER repair removes alkylated bases resulting from alkylating agent-induced DNA damage, compensating for the lack of DNA repair by oxidative dealkylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082067"}


id: GO:0010134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway by which inorganic sulfate is activated, reduced and incorporated into sulfated compounds, where the activated sulfate, adenylyl-sulfate, is reduced to sulfite by the activity of adenylyl-sulfate reductase.","definition_xrefs":["EC:1.8.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfate assimilation via adenylyl sulfate reduction","secondary_identifiers":["MetaCyc:SULFMETII-PWY"],"synonyms":[{"name":"sulphate assimilation via adenylyl sulphate reduction","type":"exact"}],"termid":"GO:0010134"}


id: PBO:0052377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20B","termid":"PBO:0052377"}


id: GO:1990446
data:
  {"annotated_genes":["SJAG_02558","SJAG_04914"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88374,110367],"is_not":false,"summary":null,"term":"GO:1990446"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear ribonucleoprotein particle.","definition_xrefs":["PMID:14713954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNP binding","termid":"GO:0070990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02558":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"U1 snRNP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990446","terms_by_termid":{"GO:1990446":null}}


id: GO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that increases the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of molecular function, epigenetic (obsolete GO:0045858)","synonyms":[{"name":"activation of protein activity, epigenetic","type":"narrow"},{"name":"positive regulation of protein activity, epigenetic","type":"exact"},{"name":"stimulation of protein activity, epigenetic","type":"narrow"},{"name":"up regulation of protein activity, epigenetic","type":"exact"},{"name":"up-regulation of protein activity, epigenetic","type":"exact"},{"name":"upregulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045858"}


id: PR:Q9C0V2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.19c gene.","definition_xrefs":["UniProtKB:Q9C0V2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C576.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.19c","synonyms":[{"name":"Spom972h-SPCC576.19c","type":"exact"}],"termid":"PR:Q9C0V2"}


id: MOD:01502
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["Unimod:214#Y","OMSSA:175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ116Y","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01502"}


id: GO:0150058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 3. Amylin receptor complex 3 (AMY3) also serves as a receptor for the amyloid-beta complex. Ligand binding to AMY3 results in increased cytosolic calcium ion levels and in activation on multiple intracellular signaling pathways.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amylin receptor complex 3","synonyms":[{"name":"AMY3 complex","type":"exact"}],"termid":"GO:0150058"}


id: FYPO:0006346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle has two poles and can elongate during anaphase, but has decreased and non-uniform thickness along its length.","definition_xrefs":["PMID:12951601","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000120","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"bipolar mitotic spindle with decreased, irregular thickness","synonyms":[{"name":"bipolar mitotic spindle with decreased, irregular thickness during mitotic cell cycle","type":"exact"},{"name":"bipolar mitotic spindle with decreased, irregular thickness during vegetative growth","type":"exact"},{"name":"decreased, irregular bipolar mitotic spindle thickness","type":"exact"},{"name":"thin, discontinuous bipolar mitotic spindle","type":"related"}],"termid":"FYPO:0006346"}


id: GO:0015904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tetracycline from one side of a membrane to the other. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tetracycline transmembrane transport","synonyms":[{"name":"tetracyclin transport","type":"broad"},{"name":"tetracycline transport","type":"broad"}],"termid":"GO:0015904"}


id: FYPO:0007780
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115783],"is_not":false,"summary":null,"term":"FYPO:0007780"}],"single_locus_phenotype":[{"annotations":[115771,115787,115792,115795,115955,115957,116087],"is_not":false,"summary":null,"term":"FYPO:0007780"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the mycelium formed by fission yeast undergoing hyphal growth covers a smaller area than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_01787":null,"SJAG_02013":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta__pmk1delta":{"display_name":"pck1delta pmk1delta","display_uniquename":"pck1delta__pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01787","SJAG_04551"],"name":"decreased mycelial expansion","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_04697","SJAG_02013","SJAG_00124"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pmk1delta","pyp1delta","gms1delta","SJAG_00124delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0007780","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007780":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1979","termid":"PBO:0054577"}


id: GO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin II or glyceollin III + NADP+ + 2 H2O, and 4-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin I + NADP+ + 2 H2O.","definition_xrefs":["EC:1.14.14.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyceollin synthase activity","synonyms":[{"name":"dimethylallyl-3,6a,9-trihydroxypterocarpan cyclase activity","type":"exact"}],"termid":"GO:0033769"}


id: PBO:0062386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 5 pseudogene","termid":"PBO:0062386"}


id: PBO:0065122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCZ divergent transcript","termid":"PBO:0065122"}


id: PATO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased process quality","termid":"PATO:0002302"}


id: GO:0009519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Layer of intercellular material, chiefly pectic substances, cementing together the primary walls of contiguous cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"middle lamella","secondary_identifiers":["Wikipedia:Middle_lamella"],"termid":"GO:0009519"}


id: PBO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 2 polycomb repressive complex 2 subunit","termid":"PBO:0046787"}


id: FYPO:0007506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at promoter","synonyms":[{"name":"increased protein localisation to chromatin at promoter","type":"exact"},{"name":"increased protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007506"}


id: PBO:0087339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific translational activator for the COX1 mRNA; binds to the COX1 mRNA; also influences stability of intron-containing COX1 primary transcripts; localizes to the mitochondrial inner membrane; contains 12 pentatricopeptide repeats (PPRs)","termid":"PBO:0087339"}


id: PBO:0087293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Similar to 6-phosphofructo-2-kinase enzymes; mRNA expression is repressed by the Rfx1p-Tup1p-Ssn6p repressor complex; YLR345W is not an essential gene","termid":"PBO:0087293"}


id: PBO:0040525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antizyme inhibitor 2","termid":"PBO:0040525"}


id: GO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + putrescine(out) -> ADP + phosphate + putrescine(in).","definition_xrefs":["EC:7.6.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type polyamine transporter activity","termid":"GO:0015417"},{"relation_name":"is_a","term_name":"putrescine transmembrane transporter activity","termid":"GO:0015489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type putrescine transporter activity","secondary_identifiers":["EC:7.6.2.16","MetaCyc:ABC-25-RXN","RHEA:29995"],"synonyms":[{"name":"ATPase-coupled putrescine transmembrane transporter activity","type":"related"},{"name":"putrescine porter activity","type":"broad"},{"name":"putrescine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015594"}


id: PBO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin (predicted)","termid":"PBO:0036527"}


id: GO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"negatively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of blood-brain barrier","synonyms":[{"name":"negative regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090212"}


id: PBO:0084317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K48-specific deubiquitinating (DUB) enzyme; MINDY family endo-type deubiquitinase that preferentially cleaves long K48-linked polyubiquitin chains between moieties; diploid deletion strain exhibits high budding index; GFP-fusion protein localizes to the cytoplasm endoplasmic reticulum and cell periphery in high-throughput studies; YPL191C has a paralog, YGL082W, that arose from the whole genome duplication; ortholog of human MINDY2/FAM63B","termid":"PBO:0084317"}


id: PBO:0045972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain binding protein 1","termid":"PBO:0045972"}


id: GO:0014853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, involved in skeletal muscle contraction, that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP). Excitatory postsynaptic potential (EPSP) is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"part_of","term_name":"skeletal muscle contraction","termid":"GO:0003009"},{"relation_name":"part_of","term_name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction","synonyms":[{"name":"regulation of excitatory post-synaptic membrane potential involved in skeletal muscle contraction","type":"exact"}],"termid":"GO:0014853"}


id: PBO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid modulatory element binding protein 1","termid":"PBO:0048765"}


id: PBO:0003638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR8 family","termid":"PBO:0003638"}


id: GO:0018719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"6-aminohexanoate transaminase activity","secondary_identifiers":["MetaCyc:R562-RXN"],"termid":"GO:0018719"}


id: GO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of p-aminobenzoyl-glutamate, the anion of p-aminobenzoyl-glutamic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"p-aminobenzoyl-glutamate transport","termid":"GO:0015814"}


id: PBO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase 2, pseudogene","termid":"PBO:0075341"}


id: GO:1990670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi cis cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with Golgi cis cisterna membrane","termid":"GO:1990670"}


id: PBO:0040908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 12","termid":"PBO:0040908"}


id: PBO:0041769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 9","termid":"PBO:0041769"}


id: PBO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1 (predicted)","termid":"PBO:0036372"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0035703"}


id: PR:Q9HFF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MICOS complex subunit MIC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit mic10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ691.03","secondary_identifiers":["UniProtKB:Q9HFF0"],"synonyms":[{"name":"Spom972h-MINOS1","type":"exact"},{"name":"mitochondrial inner membrane organizing system protein PJ691.03 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFF0"}


id: GO:0140026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissociation of the contractile vacuole after discharge, from the plasma membrane. This interaction is mediated by detethering factors that initiate the process of tubulation and fragmentation of the empty contractile vacuole bladder, which is then reincorporated into the CV network.","definition_xrefs":["PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"contractile vacuole dissociation from plasma membrane","synonyms":[{"name":"contractile vacuole detethering from plasma membrane","type":"exact"}],"termid":"GO:0140026"}


id: GO:1990918
data:
  {"annotated_genes":["SJAG_01708","SJAG_01677","SJAG_01410","SJAG_01076","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85130,85747,95626,104192,113309],"is_not":false,"summary":null,"term":"GO:1990918"}]},"cv_name":"biological_process","definition":"The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix that contributes to reciprocal meiotic recombination.","definition_xrefs":["GOC:mah","PMID:15238514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01410":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0006310","GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"double-strand break repair involved in meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990918","terms_by_termid":{"GO:1990918":null}}


id: GO:0060003
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104381],"is_not":false,"summary":null,"term":"GO:0060003"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions out of a cell or organelle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"copper ion export","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper export","type":"exact"}],"termid":"GO:0060003","terms_by_termid":{"GO:0060003":null}}


id: FYECO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arsenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arsenate","termid":"FYECO:0000258"}


id: PBO:0065375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 3","termid":"PBO:0065375"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0034606"}


id: PBO:0086910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative X-Pro aminopeptidase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YFR006W is not an essential gene","termid":"PBO:0086910"}


id: PBO:0006212
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0006212"}


id: PBO:0016899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule binding protein Mcp1","termid":"PBO:0016899"}


id: PBO:0071688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 20","termid":"PBO:0071688"}


id: PBO:0066401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 3 gamma","termid":"PBO:0066401"}


id: PBO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3","termid":"PBO:0043989"}


id: FYPO:0000007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitotic cell cycle checkpoint phenotype in which the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is abnormal. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"abnormal S-phase DNA damage checkpoint","secondary_identifiers":["FYPO:0000195"],"synonyms":[{"name":"DNA damage checkpoint defects, S-phase","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint activation","type":"related"},{"name":"abnormal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal intra-S DNA damage checkpoint","type":"exact"},{"name":"abnormal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0000007"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_16453","SJAG_02078","SJAG_04497","SJAG_00446","SJAG_00859","SJAG_00094","SJAG_01214","SJAG_02227","SJAG_05349","SJAG_02844","SJAG_02722","SJAG_05212","SJAG_03601","SJAG_03711","SJAG_02304","SJAG_00414","SJAG_00639","SJAG_00911","SJAG_04694","SJAG_04117","SJAG_04898","SJAG_01408","SJAG_03993","SJAG_03687","SJAG_01810","SJAG_01504","SJAG_04783"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88877,91960,92169,92732,93408,94241,94577,95015,95608,97239,99560,99733,102930,103070,103699,104174,105288,105389,105756,106583,107806,108266,109611,111493,112472,113724,115391],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["PMID:16540691","PMID:19239890","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00094":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_01504":null,"SJAG_01810":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03993":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05212":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MOS4-Associated Complex","type":"narrow"},{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: GO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-16 production","termid":"GO:0032659"},{"relation_name":"positively_regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-16 production","secondary_identifiers":["GO:0045377"],"synonyms":[{"name":"up regulation of interleukin-16 production","type":"exact"},{"name":"activation of interleukin-16 production","type":"narrow"},{"name":"positive regulation of IL-16 production","type":"exact"},{"name":"positive regulation of interleukin-16 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-16 production","type":"narrow"},{"name":"up-regulation of interleukin-16 production","type":"exact"},{"name":"upregulation of interleukin-16 production","type":"exact"}],"termid":"GO:0032739"}


id: GO:0003148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outflow tract septum morphogenesis","termid":"GO:0003148"}


id: FYPO:0005530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is abolished.","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"abolished protein localisation to chromatin at boundary element IRC1L during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"abolished protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at boundary element IRC1L during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005530"}


id: GO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["GOC:mah","PMID:10970777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate metabolic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate metabolism","type":"exact"}],"termid":"GO:0015956"}


id: FYPO:0004987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sunitinib. Cells stop growing (and may die) at a concentration of sunitinib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to sunitinib","synonyms":[{"name":"hypersensitive to sunitinib","type":"exact"},{"name":"sensitive to sunitinib during mitotic cell cycle","type":"related"},{"name":"sensitive to sunitinib during vegetative growth","type":"exact"}],"termid":"FYPO:0004987"}


id: PBO:0088919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT and tudor domain DNA checkpoint protein Crb2","termid":"PBO:0088919"}


id: PBO:0089180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane magnesium ion transmembrane transporter Mrs2","termid":"PBO:0089180"}


id: PBO:0029502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_elongated_curved_germ_tubes_(obsolete_FYPO:0002213)","termid":"PBO:0029502"}


id: PBO:0086148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear envelope fusion during karyogamy; pheromone-regulated; peripheral protein of the nuclear membrane; interacts with Kar5p at the spindle pole body","termid":"PBO:0086148"}


id: PBO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak1","termid":"PBO:0002650"}


id: GO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycerol + H2O = 1-alkyl-sn-glycerol + acetate + H+.","definition_xrefs":["EC:3.1.1.71","RHEA:11552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"acetylalkylglycerol acetylhydrolase activity","secondary_identifiers":["KEGG_REACTION:R04043","MetaCyc:3.1.1.71-RXN"],"synonyms":[{"name":"2-acetyl-1-alkyl-sn-glycerol acetylhydrolase activity","type":"related"},{"name":"alkylacetylglycerol acetylhydrolase activity","type":"related"}],"termid":"GO:0047378"}


id: GO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidative deamination of N-terminal peptidyl-cysteine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-cysteine deamination (obsolete GO:0018060)","termid":"GO:0018060"}


id: FYECO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A growth condition in which cells are grown in a medium that is not refreshed over the time before cells are assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single passage culture","termid":"FYECO:0000366"}


id: PBO:0046605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 7","termid":"PBO:0046605"}


id: SO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified adenine is an adenine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_adenosine","synonyms":[{"name":"modified adenosine","type":"exact"}],"termid":"SO:0001273"}


id: PBO:0016944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR91","termid":"PBO:0016944"}


id: GO:0102795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-naphthaldehyde + O2 + H2O = H+ + 1-naphthoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-naphthaldehyde:oxygen oxidoreductase activity (obsolete GO:0102795)","termid":"GO:0102795"}


id: GO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platelet-derived growth factor","termid":"GO:0036119"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platelet-derived growth factor stimulus","synonyms":[{"name":"cellular response to PDGF stimulus","type":"exact"}],"termid":"GO:0036120"}


id: GO:0097544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mid part of a cilium between the ciliary base and ciliary tip that extends into the extracellular space.","definition_xrefs":["PMID:19866682","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary shaft","synonyms":[{"name":"cilial shaft","type":"exact"},{"name":"cilium shaft","type":"exact"},{"name":"flagellar shaft","type":"exact"},{"name":"flagellum shaft","type":"exact"}],"termid":"GO:0097544"}


id: GO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + glycine = L-ornithine + guanidinoacetate.","definition_xrefs":["RHEA:13201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidinotransferase activity","termid":"GO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"glycine amidinotransferase activity","secondary_identifiers":["MetaCyc:GLYCINE-AMIDINOTRANSFERASE-RXN","Reactome:R-HSA-71275","EC:2.1.4.1"],"synonyms":[{"name":"L-arginine:glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine transamidinase activity","type":"related"},{"name":"glycine transamidinase activity","type":"related"}],"termid":"GO:0015068"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: PBO:0057045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 134","termid":"PBO:0057045"}


id: GO:1905517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a macrophage from one site to another.","definition_xrefs":["PMID:25749876","GO_REF:0000091","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage migration","termid":"GO:1905517"}


id: PBO:0071185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 26","termid":"PBO:0071185"}


id: FYPO:0002028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one actomyosin contractile ring.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"multiple actomyosin contractile rings present","synonyms":[{"name":"actomyosin contractile rings present in greater numbers","type":"exact"},{"name":"multiple actomyosin contractile rings present during mitotic cell cycle","type":"related"},{"name":"multiple actomyosin contractile rings present during vegetative growth","type":"exact"},{"name":"multiple cytokinetic contractile rings present","type":"exact"},{"name":"multiple mitotic contractile rings present","type":"exact"}],"termid":"FYPO:0002028"}


id: FYPO:0000978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mevastatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on mevastatin","synonyms":[{"name":"normal cell population growth on compactin","type":"exact"},{"name":"normal cell population growth on mevastatin","type":"exact"},{"name":"normal vegetative cell population growth on mevastatin","type":"exact"}],"termid":"FYPO:0000978"}


id: PBO:0005765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain protein Pku70","termid":"PBO:0005765"}


id: PBO:0062898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoeicosanoid receptor 1","termid":"PBO:0062898"}


id: GO:1903999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eating behavior.","definition_xrefs":["PMID:11961051","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"negative regulation of feeding behavior","termid":"GO:2000252"},{"relation_name":"negatively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eating behavior","synonyms":[{"name":"down regulation of eating behavior","type":"exact"},{"name":"down regulation of eating behaviour","type":"exact"},{"name":"down-regulation of eating behavior","type":"exact"},{"name":"down-regulation of eating behaviour","type":"exact"},{"name":"downregulation of eating behavior","type":"exact"},{"name":"downregulation of eating behaviour","type":"exact"},{"name":"inhibition of eating behavior","type":"narrow"},{"name":"inhibition of eating behaviour","type":"narrow"},{"name":"negative regulation of eating behaviour","type":"exact"}],"termid":"GO:1903999"}


id: GO:0046526
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101576],"is_not":false,"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + xylitol = D-xylulose + H+ + NADH.","definition_xrefs":["RHEA:20433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-xylulose reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01896","MetaCyc:D-XYLULOSE-REDUCTASE-RXN","Reactome:R-HSA-5662471","EC:1.1.1.9"],"synonyms":[{"name":"xylitol dehydrogenase activity","type":"exact"}],"termid":"GO:0046526","terms_by_termid":{"GO:0046526":null}}


id: PBO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit epsilon","termid":"PBO:0051507"}


id: GO:0015225
data:
  {"annotated_genes":["SJAG_02779","SJAG_02780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71212,88636],"is_not":false,"summary":null,"term":"GO:0015225"}]},"cv_name":"molecular_function","definition":"Enables the transfer of biotin from one side of a membrane to the other. Biotin is cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"biotin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901603","MetaCyc:TRANS-RXN0-240"],"synonyms":[{"name":"biotin transporter activity","type":"related"},{"name":"vitamin B7 transporter activity","type":"related"},{"name":"vitamin H transporter activity","type":"related"}],"termid":"GO:0015225","terms_by_termid":{"GO:0015225":null}}


id: PBO:0089795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 conserved fungal multispanning membrane protein","termid":"PBO:0089795"}


id: PBO:0014592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor Sre2","termid":"PBO:0014592"}


id: FYPO:0005234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MCM complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:12604790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished MCM complex binding","synonyms":[{"name":"MCM complex binding abolished","type":"exact"}],"termid":"FYPO:0005234"}


id: GO:0106250
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92960],"is_not":false,"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific genes sets transcribed by RNA polymerase III.","definition_xrefs":["GOC:txnOH-2018","PMID:31833215","PMID:15590667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0001217","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity, RNA polymerase III-specific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106250","terms_by_termid":{"GO:0106250":null}}


id: GO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + O2 = acetate + CO2 + H2O.","definition_xrefs":["EC:1.13.12.4","RHEA:16513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lactate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00319","MetaCyc:RXN-19631"],"synonyms":[{"name":"(S)-lactate:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"L-lactate monooxygenase activity","type":"related"},{"name":"L-lactate-2-monooxygenase activity","type":"related"},{"name":"lactate monooxygenase activity","type":"related"},{"name":"lactate oxidase activity","type":"related"},{"name":"lactate oxidative decarboxylase activity","type":"related"},{"name":"lactate oxygenase activity","type":"related"},{"name":"lactic oxidase activity","type":"related"},{"name":"lactic oxygenase activity","type":"related"}],"termid":"GO:0050040"}


id: GO:0010119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal movement.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal movement","termid":"GO:0010119"}


id: GO:0018789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexylsulfamate + H2O = cyclohexylamine + sulfate.","definition_xrefs":["RHEA:18481","EC:3.10.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","termid":"GO:0016826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"cyclamate sulfohydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0755","KEGG_REACTION:R02564","MetaCyc:CYCLAMATE-SULFOHYDROLASE-RXN"],"synonyms":[{"name":"cyclamate sulfamatase activity","type":"exact"},{"name":"cyclamate sulfamidase activity","type":"related"},{"name":"cyclamate sulphohydrolase activity","type":"exact"},{"name":"cyclohexylsulfamate sulfamidase activity","type":"related"},{"name":"cyclohexylsulfamate sulfohydrolase activity","type":"related"}],"termid":"GO:0018789"}


id: PBO:0072447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 11","termid":"PBO:0072447"}


id: GO:0030641
data:
  {"annotated_genes":["SJAG_02716","SJAG_00212","SJAG_01669","SJAG_05294","SJAG_01397","SJAG_00136","SJAG_01129","SJAG_04955","SJAG_02023","SJAG_01817","SJAG_01913","SJAG_02470","SJAG_00301","SJAG_00516","SJAG_04258","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97063],"is_not":false,"summary":null,"term":"GO:0030641"},{"annotations":[110281,84292,95393,84293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[86748,95485,98536,84628,86432,96571,85903,98190,100454,92225,115228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions (protons) within a cell or between a cell and its external environment.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"},{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular hydrogen ion homeostasis","type":"exact"},{"name":"proton homeostasis","type":"exact"}],"termid":"GO:0030641","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: GO:0006216
data:
  {"annotated_genes":["SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85780,104904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cytidine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytidine breakdown","type":"exact"},{"name":"cytidine catabolism","type":"exact"},{"name":"cytidine degradation","type":"exact"}],"termid":"GO:0006216","terms_by_termid":{"GO:0009972":null}}


id: FYPO:0007718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal SMN complex assembly","synonyms":[{"name":"abnormal SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007718"}


id: GO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"positively_regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast proliferation","synonyms":[{"name":"activation of fibroblast proliferation","type":"narrow"},{"name":"stimulation of fibroblast proliferation","type":"narrow"},{"name":"up regulation of fibroblast proliferation","type":"exact"},{"name":"up-regulation of fibroblast proliferation","type":"exact"},{"name":"upregulation of fibroblast proliferation","type":"exact"}],"termid":"GO:0048146"}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: PBO:0113258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in vacuolar membrane; targeted to vacuole via AP-3 pathway","termid":"PBO:0113258"}


id: PBO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(17)(q23.1)","termid":"PBO:0047950"}


id: FYPO:0006505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip","synonyms":[{"name":"abolished protein localisation to shmoo tip","type":"exact"},{"name":"abolished protein localization to mating projection tip","type":"exact"},{"name":"protein localization to shmoo tip abolished","type":"exact"}],"termid":"FYPO:0006505"}


id: PBO:0050197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 14","termid":"PBO:0050197"}


id: PBO:0091133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox20","termid":"PBO:0091133"}


id: PR:Q09855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof11 gene.","definition_xrefs":["UniProtKB:Q09855","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.01","synonyms":[{"name":"Spom972h-pof11","type":"exact"},{"name":"meiotically up-regulated gene 156 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09855"}


id: PBO:0090888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-3 peroxisome-plasma membrane adaptor Pex3","termid":"PBO:0090888"}


id: PBO:0050724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 10","termid":"PBO:0050724"}


id: GO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of male genitalia are generated and organized from the genital imaginal disc.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia morphogenesis","termid":"GO:0048805"},{"relation_name":"is_a","term_name":"male genitalia morphogenesis","termid":"GO:0048808"},{"relation_name":"part_of","term_name":"imaginal disc-derived male genitalia development","termid":"GO:0007485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived male genitalia morphogenesis","synonyms":[{"name":"male genital morphogenesis","type":"broad"}],"termid":"GO:0048803"}


id: FYPO:0006409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is higher than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular nitric oxide level during stationary phase","synonyms":[{"name":"increased cellular NO level during stationary phase","type":"exact"},{"name":"increased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"increased nitric oxide accumulation during stationary phase","type":"related"}],"termid":"FYPO:0006409"}


id: SO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Jockey retrotransposons are LINE elements (SO:0000194) found only in arthropods. The full-length element is ~ 5 kb and contains two open reading frames (SO:0000236), ORF1 (568 aa) and ORF2 (916 aa), the second of which encodes an apurinic endonuclease (APE) and a reverse transcriptase (RT).","definition_xrefs":["PMID:31709017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jockey_LINE_retrotransposon","synonyms":[{"name":"Jockey LINE retrotransposon","type":"exact"},{"name":"LINE Jockey element","type":"exact"},{"name":"RIJ retrotransposon","type":"exact"}],"termid":"SO:0002271"}


id: FYPO:0000849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cytoplasm of a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cytoplasmic protein level during vegetative growth","synonyms":[{"name":"cytoplasmic accumulation of protein","type":"exact"},{"name":"cytoplasmic protein accumulation during vegetative growth","type":"exact"},{"name":"increased cytoplasmic protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0000849"}


id: PBO:0042075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144B, pseudogene","termid":"PBO:0042075"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: PBO:0034509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_mitotic_interphase","termid":"PBO:0034509"}


id: PBO:0084497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein of unknown function; required for spore wall formation during sporulation and for timely prospore membrane closure along with SPS1; required with Sps1p for phosphorylation and turnover of Ssp1p; dispensable for both nuclear divisions during meiosis","termid":"PBO:0084497"}


id: GO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle endowment","termid":"GO:0001551"}


id: GO:0102975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol acetate + NADP = versiconal hemiacetal acetate + NADPH.","definition_xrefs":["RHEA:35695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"versiconal hemiacetal acetate reductase activity","secondary_identifiers":["MetaCyc:RXN-9490"],"termid":"GO:0102975"}


id: FYPO:0001721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sodium export","synonyms":[{"name":"abnormal cellular sodium export","type":"exact"},{"name":"abnormal sodium export during mitotic cell cycle","type":"related"},{"name":"abnormal sodium export during vegetative growth","type":"exact"},{"name":"abnormal sodium export from cell","type":"exact"},{"name":"abnormal sodium ion export","type":"exact"}],"termid":"FYPO:0001721"}


id: SO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_unprocessed_pseudogene","synonyms":[{"name":"translated unprocessed pseudogene","type":"exact"},{"name":"translated_nonprocessed_pseudogene","type":"exact"}],"termid":"SO:0002106"}


id: PR:O59708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C36.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.11","synonyms":[{"name":"Spom972h-SPBC36.11","type":"exact"}],"termid":"PR:O59708"}


id: PBO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septation","termid":"PBO:0031313"}


id: FYPO:0009010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to ultraviolet light.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to UV during vegetative growth","synonyms":[{"name":"resistance to ultraviolet light during vegetative growth","type":"exact"}],"termid":"FYPO:0009010"}


id: GO:0034200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycero-beta-D-manno-heptose 1,7-bisphosphate + H2O = D-glycero-beta-D-manno-heptose 1-phosphate + phosphate.","definition_xrefs":["PMID:11279237","RHEA:28518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity","secondary_identifiers":["EC:3.1.3.82","MetaCyc:RXN0-4361"],"synonyms":[{"name":"D,D-heptose 1,7-bisphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034200"}


id: PBO:0039829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox","termid":"PBO:0039829"}


id: PBO:0076945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor","termid":"PBO:0076945"}


id: PBO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD34C antisense RNA 1","termid":"PBO:0039533"}


id: GO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-9,10-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1132"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 9,10-dioxygenase activity (obsolete GO:0034811)","termid":"GO:0034811"}


id: GO:0009101
data:
  {"annotated_genes":["SJAG_03790","SJAG_03333","SJAG_04316","SJAG_03764","SJAG_01264","SJAG_04231","SJAG_01491","SJAG_03311","SJAG_04952","SJAG_01950","SJAG_01389","SJAG_02102","SJAG_03871","SJAG_02903","SJAG_02163","SJAG_00747","SJAG_04401","SJAG_04770","SJAG_01276","SJAG_04954","SJAG_02996","SJAG_04090","SJAG_05219","SJAG_00924","SJAG_02783","SJAG_00394","SJAG_00816","SJAG_01972","SJAG_01069","SJAG_04053","SJAG_04906","SJAG_03676","SJAG_04095","SJAG_03149","SJAG_01006","SJAG_03032","SJAG_01595","SJAG_00437","SJAG_03656","SJAG_00598","SJAG_00334","SJAG_05348","SJAG_03330","SJAG_03082","SJAG_00183","SJAG_04571","SJAG_04363","SJAG_04728","SJAG_00831","SJAG_03150","SJAG_04127","SJAG_03188","SJAG_03555","SJAG_03774","SJAG_02056","SJAG_00554","SJAG_02648","SJAG_03056","SJAG_04821","SJAG_02519","SJAG_01021"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84101],"is_not":false,"summary":null,"term":"GO:0009101"},{"annotations":[94454,84100,105545,114875,97317,101476,101050,101591,102487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[87704,113250,101528,95252,90467,96550,100116,92992,103249,61133,98849,105818,86961,107609,94966,96348,94916,109071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[110273,114329,104915,94348,112594,102291,100319,96585,110467,104544,92280],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[101592,102488,97318,95342,99333,95491,85790,101051,105546,89724,107238,109213,114876,95340,114547,107431,95333,107232,95343,96209,99265,89722,62811,89723,89725,84102,97895,95341],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[113357,95325,95326,97905,94455,84103,95323,95344,95347,95345,89727,105819,96885,89728,89726,101477,95346,89729,99118,114548,96551,95324,107610,91895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[78818,97319,99266,95334,114877,107233,100626,107239,101052,114549],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[89607,102489,98094],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein anabolism","type":"exact"},{"name":"glycoprotein biosynthesis","type":"exact"},{"name":"glycoprotein formation","type":"exact"},{"name":"glycoprotein synthesis","type":"exact"}],"termid":"GO:0009101","terms_by_termid":{"GO:0000032":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0009101":null,"GO:0018279":null,"GO:0035269":null}}


id: MOD:01711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01711"}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: GO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:11591336","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female germ-line cyst encapsulation","termid":"GO:0048139"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived female germ-line cyst encapsulation","termid":"GO:0030708"}


id: GO:0034190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apolipoprotein receptor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"apolipoprotein receptor binding","termid":"GO:0034190"}


id: PBO:0058702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6830","termid":"PBO:0058702"}


id: PBO:0069072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 319, pseudogene","termid":"PBO:0069072"}


id: PATO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's gradually becoming thicker towards the end.","definition_xrefs":["MP:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clavate","secondary_identifiers":["PATO:0001797"],"synonyms":[{"name":"club-like","type":"exact"},{"name":"club-shaped","type":"exact"},{"name":"clubbed","type":"exact"}],"termid":"PATO:0001883"}


id: PR:O42914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.08c","synonyms":[{"name":"Spom972h-oga1","type":"exact"}],"termid":"PR:O42914"}


id: GO:1903234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["GO_REF:0000058","PMID:16782817","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"down regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"down-regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"downregulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"inhibition of calcium ion-dependent exocytosis of neurotransmitter","type":"narrow"}],"termid":"GO:1903234"}


id: PBO:0074885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63","termid":"PBO:0074885"}


id: PBO:0042778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 95","termid":"PBO:0042778"}


id: PBO:0080707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 9A","termid":"PBO:0080707"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: GO:1901546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle lumen acidification.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"regulates","term_name":"synaptic vesicle lumen acidification","termid":"GO:0097401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle lumen acidification","synonyms":[{"name":"regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"regulation of synaptic vesicle lumen proton loading","type":"exact"}],"termid":"GO:1901546"}


id: GO:0033250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a penicillin + H2O = a substituted beta-amino acid derivative of the penicillin.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete penicillinase activity (obsolete GO:0033250)","termid":"GO:0033250"}


id: GO:0043857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-ornithine + carbamoyl phosphate = N(2)-acetyl-L-citrulline + H+ + phosphate.","definition_xrefs":["RHEA:18609","EC:2.1.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetylornithine carbamoyltransferase activity","secondary_identifiers":["MetaCyc:2.1.3.9-RXN","KEGG_REACTION:R07245"],"synonyms":[{"name":"AOTC","type":"related"},{"name":"N-acetylornithine transcarbamylase activity","type":"exact"},{"name":"acetylornithine transcarbamylase activity","type":"exact"},{"name":"carbamoyl-phosphate:2-N-acetyl-L-ornithine carbamoyltransferase activity","type":"related"},{"name":"carbamoyl-phosphate:N2-acetyl-L-ornithine carbamoyltransferase activity","type":"related"}],"termid":"GO:0043857"}


id: GO:0120157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase complex that is required for the establishment of a cell polarity axis during the cell division cycle. Binds directly to activated CDC42 GTPase and is required for orchestrating a cellular gradient of CDC42. In S. cerevisiae components are: BEM1, CDC24 and CLA4; from worms to vertebrates it contains a PAR6 protein, PAR3 protein and an atypical PKC.","definition_xrefs":["PMID:11113154","GOC:lnp","PMID:18005931","PMID:28682236","PMID:22500799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PAR polarity complex","synonyms":[{"name":"BEM1-CDC24-CLA4 complex","type":"narrow"},{"name":"Cdc42p GEF-PAK complex","type":"narrow"},{"name":"PAR3-PAR6-atypical PKC","type":"narrow"},{"name":"PAR3/PAR6/aPKC","type":"narrow"},{"name":"PAR6-PAR3-aPKC complex","type":"narrow"},{"name":"apical polarity complex","type":"exact"}],"termid":"GO:0120157"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: GO:1905629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serotonin biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:TermGenie","PMID:25642596","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of serotonin biosynthetic process","termid":"GO:1905627"},{"relation_name":"positively_regulates","term_name":"serotonin biosynthetic process","termid":"GO:0042427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serotonin biosynthetic process","synonyms":[{"name":"activation of serotonin anabolism","type":"narrow"},{"name":"activation of serotonin biosynthesis","type":"narrow"},{"name":"activation of serotonin biosynthetic process","type":"narrow"},{"name":"activation of serotonin formation","type":"narrow"},{"name":"activation of serotonin synthesis","type":"narrow"},{"name":"positive regulation of serotonin anabolism","type":"exact"},{"name":"positive regulation of serotonin biosynthesis","type":"exact"},{"name":"positive regulation of serotonin formation","type":"exact"},{"name":"positive regulation of serotonin synthesis","type":"exact"},{"name":"up regulation of serotonin anabolism","type":"exact"},{"name":"up regulation of serotonin biosynthesis","type":"exact"},{"name":"up regulation of serotonin biosynthetic process","type":"exact"},{"name":"up regulation of serotonin formation","type":"exact"},{"name":"up regulation of serotonin synthesis","type":"exact"},{"name":"up-regulation of serotonin anabolism","type":"exact"},{"name":"up-regulation of serotonin biosynthesis","type":"exact"},{"name":"up-regulation of serotonin biosynthetic process","type":"exact"},{"name":"up-regulation of serotonin formation","type":"exact"},{"name":"up-regulation of serotonin synthesis","type":"exact"},{"name":"upregulation of serotonin anabolism","type":"exact"},{"name":"upregulation of serotonin biosynthesis","type":"exact"},{"name":"upregulation of serotonin biosynthetic process","type":"exact"},{"name":"upregulation of serotonin formation","type":"exact"},{"name":"upregulation of serotonin synthesis","type":"exact"}],"termid":"GO:1905629"}


id: PBO:0058828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8058","termid":"PBO:0058828"}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: PBO:0064731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 67","termid":"PBO:0064731"}


id: GO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, DNA-mediated (obsolete GO:0000336)","synonyms":[{"name":"activation of DNA transposition","type":"narrow"},{"name":"positive regulation of DNA transposition","type":"exact"},{"name":"stimulation of DNA transposition","type":"narrow"},{"name":"up regulation of DNA transposition","type":"exact"},{"name":"up-regulation of DNA transposition","type":"exact"},{"name":"upregulation of DNA transposition","type":"exact"}],"termid":"GO:0000336"}


id: GO:0047229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxydocosanoate + UDP-D-glucose = 13-beta-D-glucosyloxydocosanoate + UDP.","definition_xrefs":["EC:2.4.1.158","MetaCyc:2.4.1.158-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"13-hydroxydocosanoate 13-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:HYDROXYDOCOSANOATE-TRANS-RXN","RHEA:22316"],"synonyms":[{"name":"13-glucosyloxydocosanoate 2'-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-13-hydroxydocosanoate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoic acid glucosyltransferase activity","type":"related"},{"name":"UDPglucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxydocosanoate glucosyltransferase activity","type":"related"}],"termid":"GO:0047229"}


id: PBO:0031206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_calcium_ion","termid":"PBO:0031206"}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: GO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:jid","PMID:10625531","PMID:9374402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"}


id: PBO:0091118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase activity","termid":"PBO:0091118"}


id: GO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N1-(gamma-L-glutamyl-L-cysteinyl-glycyl)-spermidine + H2O = gamma-L-glutamyl-L-cysteinyl-glycine + spermidine.","definition_xrefs":["EC:3.5.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"glutathionylspermidine amidase activity","secondary_identifiers":["RHEA:17173","MetaCyc:GSPAMID-RXN"],"synonyms":[{"name":"GSP amidase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteinyl-glycine:spermidine amidase activity","type":"related"},{"name":"glutathionylspermidine amidohydrolase (spermidine-forming) activity","type":"related"}],"termid":"GO:0008884"}


id: PBO:0082627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of conserved R2TP complex (Rvb1-Rvb2-Tah1-Pih1); R2TP complex interacts with Hsp90 (Hsp82p and Hsc82p) to mediate assembly of large protein complexes such as box C/D snoRNPs and RNA polymerase II; contains a single TPR domain with at least two TPR motifs; plays a role in determining prion variants","termid":"PBO:0082627"}


id: PBO:0083375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF PGD1/YGL025C","termid":"PBO:0083375"}


id: PBO:0086627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus","termid":"PBO:0086627"}


id: PR:O94752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enhancer of mRNA-decapping protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13612:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA-decapping protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.11c","secondary_identifiers":["UniProtKB:O94752"],"synonyms":[{"name":"SPBC18E5.11c","type":"related"},{"name":"Spom972h-EDC3","type":"exact"}],"termid":"PR:O94752"}


id: PBO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 3","termid":"PBO:0052125"}


id: PBO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin binding protein 2","termid":"PBO:0044216"}


id: PBO:0058987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 pseudogene 1","termid":"PBO:0058987"}


id: PBO:0011981
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mutated in Poikiloderma with Neutropenia","termid":"PBO:0011981"}


id: PATO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000549 far red light sensitivity value (obsolete PATO:0000549)","termid":"PATO:0000549"}


id: PBO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031844"}


id: PBO:0084656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor succinate dehydrogenase isozyme; participates in oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner; YJL045W has a paralog, SDH1, that arose from the whole genome duplication","termid":"PBO:0084656"}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: GO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","PMID:16482511","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"positively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-17 production","secondary_identifiers":["GO:1905078","GO:0045380"],"synonyms":[{"name":"activation of interleukin-17 production","type":"narrow"},{"name":"positive regulation of CTLA-8 production","type":"exact"},{"name":"positive regulation of Cytotoxic T-lymphocyte-associated antigen 8 production","type":"exact"},{"name":"positive regulation of IL-17 production","type":"exact"},{"name":"positive regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-17 secretion","type":"narrow"},{"name":"stimulation of interleukin-17 production","type":"narrow"},{"name":"up regulation of interleukin-17 production","type":"exact"},{"name":"up-regulation of interleukin-17 production","type":"exact"},{"name":"upregulation of interleukin-17 production","type":"exact"}],"termid":"GO:0032740"}


id: RO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlated_with","termid":"RO:0002610"}


id: GO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + 2 ferricytochrome c = glyoxylate + NH3 + 2 ferrocytochrome c.","definition_xrefs":["MetaCyc:GLYCINE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","termid":"GO:0016640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycine dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:16909"],"synonyms":[{"name":"glycine-cytochrome c reductase activity","type":"related"},{"name":"glycine:ferricytochrome-c oxidoreductase (deaminating)","type":"related"},{"name":"reductase, glycine-cytochrome c","type":"related"}],"termid":"GO:0047959"}


id: PBO:0079925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB2 ribosome biogenesis homolog","termid":"PBO:0079925"}


id: PBO:0041627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 A","termid":"PBO:0041627"}


id: PBO:0052959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine aminotransferase 3","termid":"PBO:0052959"}


id: PR:000036301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"},{"relation_name":"is_a","term_name":"fungal-type cyclin-dependent kinase 1","termid":"PR:000037486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:000036301"}


id: PBO:0040008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 16","termid":"PBO:0040008"}


id: PBO:0043714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 2","termid":"PBO:0043714"}


id: PBO:0085199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein and component of the Ctf3 subcomplex; binds to centromeric DNA in a Ctf19p-dependent manner; involved in chromosome segregation and minichromosome maintenance; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-K and fission yeast sim4","termid":"PBO:0085199"}


id: PBO:0027773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_4-amino-1-methyl-1H-imidazole-5-carboselenoamide","termid":"PBO:0027773"}


id: GO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Co2+)(out) = (Zn2+ or Co2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt, zinc uptake permease activity (obsolete GO:0015339)","synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"exact"}],"termid":"GO:0015339"}


id: PBO:0042119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 191","termid":"PBO:0042119"}


id: GO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory membrane","synonyms":[{"name":"membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062242"}


id: GO:0100024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates carbohydrate metabolic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate metabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100024)","termid":"GO:0100024"}


id: PBO:0063188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor cilium actin regulator","termid":"PBO:0063188"}


id: PBO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.23","termid":"PBO:0005012"}


id: GO:0004128
data:
  {"annotated_genes":["SJAG_02794","SJAG_00235","SJAG_02395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76950,88805,113224,115277],"is_not":false,"summary":null,"term":"GO:0004128"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + 2 ferricytochrome b(5) = NAD(P)+ + 2 ferrocytochrome b(5).","definition_xrefs":["EC:1.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_02395":null,"SJAG_02794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:46680","Reactome:R-HSA-198824","Reactome:R-HSA-6806831","MetaCyc:CYTOCHROME-B5-REDUCTASE-RXN"],"synonyms":[{"name":"NADH 5alpha-reductase activity","type":"related"},{"name":"NADH-cytochrome b5 reductase activity","type":"related"},{"name":"NADH-cytochrome-b5 reductase activity","type":"related"},{"name":"NADH-ferricytochrome b5 oxidoreductase activity","type":"related"},{"name":"NADH:ferricytochrome-b5 oxidoreductase activity","type":"related"},{"name":"cytochrome b5 reductase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-cytochrome b5 reductase activity","type":"related"},{"name":"reduced nicotinamide adeninedinucleotide-cytochrome b5 reductase activity","type":"related"}],"termid":"GO:0004128","terms_by_termid":{"GO:0004128":null}}


id: GO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: GO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spore movement on or near host (obsolete GO:0075233)","termid":"GO:0075233"}


id: GO:1990333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the spindle checkpoint, preventing the activation of the anaphase-promoting complex until all chromosomes are correctly attached in a bipolar fashion to the mitotic spindle. In budding yeast this complex consists of Mad2p and Cdc20p, and in mammalian cells it consists of MAD2 and CDC20.","definition_xrefs":["GOC:bhm","PMID:15879521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"mitotic checkpoint complex","termid":"GO:0033597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic checkpoint complex, CDC20-MAD2 subcomplex","synonyms":[{"name":"CDC20-MAD2 complex","type":"exact"}],"termid":"GO:1990333"}


id: PBO:0054643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2048","termid":"PBO:0054643"}


id: PBO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036173"}


id: PBO:0052470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 16","termid":"PBO:0052470"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: GO:0048461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the flower. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower structural organization","secondary_identifiers":["GO:0048412"],"synonyms":[{"name":"flower structural organisation","type":"exact"}],"termid":"GO:0048461"}


id: GO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,3 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["EC:2.4.1.44","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide 3-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-22172"],"synonyms":[{"name":"LPS 3-alpha-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:lipopolysaccharide 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:lipopolysaccharide alpha,3-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:polysaccharide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:lipopolysaccharide 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"lipopolysaccharide 1,3-galactosyltransferase activity","type":"related"},{"name":"lipopolysaccharide galactosyltransferase activity","type":"exact"},{"name":"lipopolysaccharide-alpha-1,3-D-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphate galactose:lipopolysaccharide alpha-3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-lipopolysaccharide alpha,3-galactosyltransferase activity","type":"related"}],"termid":"GO:0008918"}


id: GO:0019477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"L-lysine metabolic process","termid":"GO:0046440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"L-lysine catabolic process","synonyms":[{"name":"L-lysine breakdown","type":"exact"},{"name":"L-lysine catabolism","type":"exact"},{"name":"L-lysine degradation","type":"exact"}],"termid":"GO:0019477"}


id: PBO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad24","termid":"PBO:0002026"}


id: FYPO:0004205
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115968],"is_not":false,"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased siRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature siRNA level","type":"exact"},{"name":"decreased siRNA accumulation","type":"related"},{"name":"decreased siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased siRNA level during vegetative growth","type":"exact"},{"name":"decreased siRNA transcript level","type":"exact"},{"name":"decreased small interfering RNA level","type":"exact"},{"name":"reduced siRNA level","type":"exact"}],"termid":"FYPO:0004205","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0061363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the biosynthesis of progesterone biosynthesis that contributes to luteolysis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of progesterone biosynthetic process","termid":"GO:2000183"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of progesterone biosynthesis involved in luteolysis","synonyms":[{"name":"functional luteolysis","type":"exact"}],"termid":"GO:0061363"}


id: PBO:0062667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily I member 1 pseudogene","termid":"PBO:0062667"}


id: PBO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S pombe Heme Utilization","termid":"PBO:0013743"}


id: PBO:0086927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; appears to be modulated by phosphorylation; transcription repressed by glucose, and Pyk2p may be active under low glycolytic flux; PYK2 has a paralog, CDC19, that arose from the whole genome duplication","termid":"PBO:0086927"}


id: GO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzoylglycine + H2O = benzoate + glycine.","definition_xrefs":["EC:3.5.1.32","RHEA:10424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hippurate hydrolase activity","secondary_identifiers":["MetaCyc:HIPPURATE-HYDROLASE-RXN","KEGG_REACTION:R01424"],"synonyms":[{"name":"N-benzoylamino-acid amidohydrolase activity","type":"related"},{"name":"benzoylglycine amidohydrolase activity","type":"related"},{"name":"hippuricase activity","type":"related"}],"termid":"GO:0047980"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:25736836","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: PBO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase beta subunit (predicted)","termid":"PBO:0001108"}


id: PBO:0058386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4758","termid":"PBO:0058386"}


id: GO:2000740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal stem cell differentiation","termid":"GO:2000740"}


id: GO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex, in which the complex is formed through interaction of the protein(s) with a interferon-stimulated response element (ISRE) in the DNA.","definition_xrefs":["GOC:amm","PMID:11747630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"protein-DNA ISRE complex assembly","synonyms":[{"name":"protein-DNA interferon-stimulated response element complex assembly","type":"exact"}],"termid":"GO:0035362"}


id: PR:O14165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridine-5'-phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4C5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.01","secondary_identifiers":["UniProtKB:O14165"],"synonyms":[{"name":"Spom972h-HDHD1","type":"exact"}],"termid":"PR:O14165"}


id: PBO:0045973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHBP1 antisense RNA 1","termid":"PBO:0045973"}


id: PBO:0043142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 10","termid":"PBO:0043142"}


id: PBO:0091150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF4536, human DMAC1 ortholog, possibly has a general role in mitochondrial complex assembly","termid":"PBO:0091150"}


id: PBO:0055040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2455","termid":"PBO:0055040"}


id: GO:0046436
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111257],"is_not":false,"summary":null,"term":"GO:0046436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"D-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-alanine metabolism","type":"exact"}],"termid":"GO:0046436","terms_by_termid":{"GO:0046436":null}}


id: PBO:0046844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FABP6 antisense RNA 1","termid":"PBO:0046844"}


id: GO:0035259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear glucocorticoid receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor binding","synonyms":[{"name":"glucocorticoid receptor binding","type":"broad"}],"termid":"GO:0035259"}


id: GO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"gamma-delta intraepithelial T cell development","type":"related"},{"name":"gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002304"}


id: PBO:0029832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_vegetative_cell","termid":"PBO:0029832"}


id: PBO:0040093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L pseudogene 1","termid":"PBO:0040093"}


id: PBO:0068615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 66, pseudogene","termid":"PBO:0068615"}


id: PBO:0062701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 2","termid":"PBO:0062701"}


id: GO:1904155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN2 thymocyte. A DN2 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25-.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:25398325","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN2 thymocyte differentiation","termid":"GO:1904155"}


id: PBO:0046911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E3","termid":"PBO:0046911"}


id: PATO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000090 relative sensitivity (obsolete PATO:0000090)","termid":"PATO:0000090"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: GO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of the enzyme monophenol monooxygenase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monophenol monooxygenase activator activity (obsolete GO:0008439)","synonyms":[{"name":"monophenol monooxygenase activator activity","type":"exact"},{"name":"prophenol oxidase activator","type":"related"}],"termid":"GO:0008439"}


id: GO:0060861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of floral organ shedding, the controlled shedding of floral organs.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of floral organ abscission","termid":"GO:0060861"}


id: GO:1900333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0006629","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"}


id: FYPO:0007018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 2'-O-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA guanosine 2'-O-methylation","synonyms":[{"name":"normal 2'-O-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 2'-O-methylguanosine formation","type":"exact"},{"name":"normal tRNA Gm formation","type":"exact"},{"name":"normal tRNA guanosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 2'-O-methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007018"}


id: GO:0006101
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96029],"is_not":false,"summary":null,"term":"GO:0006101"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"citrate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrate metabolism","type":"exact"}],"termid":"GO:0006101","terms_by_termid":{"GO:0006101":null}}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-galactose 6-phosphate 1-epimerase activity (obsolete GO:0102541)","termid":"GO:0102541"}


id: PBO:0058153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4448","termid":"PBO:0058153"}


id: PBO:0078818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-1","termid":"PBO:0078818"}


id: GO:0141091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a member of the transforming growth factor receptor superfamily, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:28096268","PMID:22651914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta receptor superfamily signaling pathway","synonyms":[{"name":"TGF-beta receptor superfamily signaling pathway","type":"exact"},{"name":"TGF-beta receptor superfamily signalling pathway","type":"exact"},{"name":"TGFbeta receptor superfamily signaling pathway","type":"exact"},{"name":"TGFbeta receptor superfamily signalling pathway","type":"exact"},{"name":"transforming growth factor beta receptor superfamily signalling pathway","type":"exact"}],"termid":"GO:0141091"}


id: GO:0005916
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that contains the transmembrane protein N-cadherin, which interacts with identical molecules from neighbouring cells to form a tight mechanical intercellular link; forms a large portion of the intercalated disc, the structure at which myofibrils terminate in cardiomyocytes.","definition_xrefs":["GOC:mtg_muscle","GOC:bc","PMID:11732910","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"},{"relation_name":"part_of","term_name":"intercalated disc","termid":"GO:0014704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fascia adherens","secondary_identifiers":["Wikipedia:Fascia_adherens"],"termid":"GO:0005916"}


id: FYPO:0003740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) occurs to a lower extent than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:mah","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased CENP-A containing chromatin assembly","synonyms":[{"name":"decreased CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased CENP-A deposition","type":"related"},{"name":"decreased CENP-A loading","type":"related"},{"name":"decreased CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased centromere-specific histone exchange","type":"exact"},{"name":"decreased centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0003740"}


id: PBO:0067182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 240, pseudogene","termid":"PBO:0067182"}


id: PBO:0071652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 16","termid":"PBO:0071652"}


id: PBO:0084711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane half-type ABC transporter; mediates export of peptides generated upon proteolysis of mitochondrial proteins; plays a role in the regulation of cellular resistance to oxidative stress","termid":"PBO:0084711"}


id: PBO:0069542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 812, pseudogene","termid":"PBO:0069542"}


id: GO:0061001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"dendritic spine morphogenesis","termid":"GO:0060997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic spine morphogenesis","termid":"GO:0061001"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: PBO:0071691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 23","termid":"PBO:0071691"}


id: CHEBI:48080
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A","termid":"CHEBI:48080"}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: PBO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside mannosyltransferase","termid":"PBO:0000810"}


id: PBO:0072972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 2","termid":"PBO:0072972"}


id: PBO:0041780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle associated protein 1","termid":"PBO:0041780"}


id: PBO:0066020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP1 pseudogene 1","termid":"PBO:0066020"}


id: GO:0019838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"growth factor binding","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"related"}],"termid":"GO:0019838"}


id: GO:0099028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postynaptic endocytic zone membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postynaptic endocytic zone membrane (obsolete GO:0099028)","termid":"GO:0099028"}


id: GO:0071030
data:
  {"annotated_genes":["SJAG_04025","SJAG_04768","SJAG_02879","SJAG_02382","SJAG_02005","SJAG_02622","SJAG_01331","SJAG_00456","SJAG_04500","SJAG_05243"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84092,85426,87376,88942,91571,102835,105784,106314,112059,114613],"is_not":false,"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly spliced pre-mRNAs within the nucleus.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_01331":null,"SJAG_02005":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear mRNA surveillance of spliceosomal pre-mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA catabolic process of incorrectly spliced pre-mRNA","type":"exact"},{"name":"nuclear mRNA quality control of incorrectly spliced pre-mRNA","type":"exact"}],"termid":"GO:0071030","terms_by_termid":{"GO:0071030":null}}


id: GO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated immune response to a tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"}


id: PBO:0055911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 2","termid":"PBO:0055911"}


id: PR:O74849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity fructose transporter ght6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.13","synonyms":[{"name":"Spom972h-ght6","type":"exact"},{"name":"hexose transporter 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74849"}


id: PBO:0087488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C) complex; COMPASS methylates Lys4 of histone H3 and functions in silencing at telomeres; has a C-terminal Sdc1 Dpy-30 Interaction (SDI) domain that mediates binding to Sdc1p; similar to trithorax-group protein ASH2L","termid":"PBO:0087488"}


id: GO:0070899
data:
  {"annotated_genes":["SJAG_04367","SJAG_00358","SJAG_04113","SJAG_02302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89371,105002],"is_not":false,"summary":null,"term":"GO:0070899"},{"annotations":[90839,113468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine in position 34 of a mitochondrial tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_02302":null,"SJAG_04113":null,"SJAG_04367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA wobble uridine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070899","terms_by_termid":{"GO:0070899":null,"GO:1990799":null}}


id: PBO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-7","termid":"PBO:0052896"}


id: GO:0060735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to double-stranded RNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to dsRNA","termid":"GO:0071359"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by dsRNA","synonyms":[{"name":"regulation of eIF2 alpha phosphorylation by PKR","type":"narrow"},{"name":"regulation of eIF2 alpha phosphorylation by double-stranded RNA","type":"exact"}],"termid":"GO:0060735"}


id: GO:0022851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when GABA has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"GABA-gated chloride ion channel activity","termid":"GO:0022851"}


id: GO:1904148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19260726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nonylphenol","termid":"GO:1904147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonylphenol","termid":"GO:1904148"}


id: PR:Q09912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein psi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.07c","synonyms":[{"name":"Spom972h-psi1","type":"exact"},{"name":"protein psi (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09912"}


id: GO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state.","definition_xrefs":["PMID:3091429","PMID:7781901","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell cellular homeostasis","synonyms":[{"name":"muscle fiber maintenance","type":"narrow"},{"name":"muscle homeostasis","type":"related"}],"termid":"GO:0046716"}


id: MOD:01117
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentamethyldihydrobenzofuransulfonyl","synonyms":[{"name":"Pbf","type":"exact"}],"termid":"MOD:01117"}


id: PBO:0113391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elongated buds and a large fraction of budded cells have only one nucleus; Interacts with CKA2 in a potentially competitive mode with the CK2 holoenzyme. Structural prediction analysis reveals a clamp-domain (rear, hinge, front), an unstructured gag region, and a lock-domain","termid":"PBO:0113391"}


id: SO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The maximal intersection of exon and UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noncoding_region_of_exon","synonyms":[{"name":"noncoding region of exon","type":"exact"}],"termid":"SO:0001214"}


id: PR:P48008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn3 gene.","definition_xrefs":["UniProtKB:P48008","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.01","synonyms":[{"name":"Spom972h-spn3","type":"exact"}],"termid":"PR:P48008"}


id: PBO:0071664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 5","termid":"PBO:0071664"}


id: PBO:0061038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 1","termid":"PBO:0061038"}


id: MOD:02042
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-asparagine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-asparagine residue","synonyms":[{"name":"XlnkAsn","type":"exact"}],"termid":"MOD:02042"}


id: PBO:0065030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDX5 pseudogene 1","termid":"PBO:0065030"}


id: PBO:0079391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4A class IVa","termid":"PBO:0079391"}


id: PR:O59833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C965.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.13","synonyms":[{"name":"Spom972h-SPCC965.13","type":"exact"}],"termid":"PR:O59833"}


id: PBO:0054252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1635","termid":"PBO:0054252"}


id: PBO:0049639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 42","termid":"PBO:0049639"}


id: GO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the absence of centrosomes. Formation is initiated by the nucleation of microtubules (MTs) in the vicinity of condensed chromatin. MTs then attach to and congress around the chromatin due to activity of microtubule motors. A bipolar spindle is formed by focusing of the terminal ends of the MT array into spindle poles by molecular motors and cross-linking proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:tb","PMID:15034926","GOC:expert_rg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"anastral spindle assembly","termid":"GO:0055048"}


id: GO:1903473
data:
  {"annotated_genes":["SJAG_04776","SJAG_04597","SJAG_03631","SJAG_03581","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84131,90985,91151,107045,109872],"is_not":false,"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"positively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":5,"genes_by_uniquename":{"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"activation of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"positive regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of mitotic actomyosin contractile ring constriction","type":"exact"},{"name":"up regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"up-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"upregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of mitotic actomyosin contractile ring contraction","type":"exact"}],"termid":"GO:1903473","terms_by_termid":{"GO:1903473":null}}


id: PBO:0073854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3R1 antisense RNA 1","termid":"PBO:0073854"}


id: PBO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit a (predicted)","termid":"PBO:0002088"}


id: GO:1903478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actin filament bundle convergence that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GOC:vw","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:1903478)","synonyms":[{"name":"actin filament bundle convergence involved in actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"actin filament bundle convergence involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament bundle convergence involved in cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament bundle convergence involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903478"}


id: PBO:0069708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 988, pseudogene","termid":"PBO:0069708"}


id: FYPO:0000664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified catalytic activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished catalytic activity","synonyms":[{"name":"catalytic activity abolished","type":"exact"}],"termid":"FYPO:0000664"}


id: PBO:0082526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell fusion regulator; cytoplasmic protein localized to shmoo tip; required for alignment of parental nuclei before nuclear fusion during mating; contains a Dbl-homology domain; binds specifically with activated Cdc42p","termid":"PBO:0082526"}


id: PBO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1 family transcriptional regulator Sgt1","termid":"PBO:0001199"}


id: GO:1902357
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a membrane.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:18682385","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopropylmalate transport","termid":"GO:0034659"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"2-isopropylmalate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902357","terms_by_termid":{"GO:1990556":null}}


id: GO:0090162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization of an epithelial cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell polarity","termid":"GO:0090162"}


id: PBO:0067549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 698, pseudogene","termid":"PBO:0067549"}


id: PBO:0076186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 1","termid":"PBO:0076186"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: PBO:0063374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 1B, choline","termid":"PBO:0063374"}


id: PR:O14209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C6B12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.04c","secondary_identifiers":["UniProtKB:O14209"],"synonyms":[{"name":"Spom972h-ybdL","type":"exact"}],"termid":"PR:O14209"}


id: FYPO:0003780
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116034],"is_not":false,"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":1,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta"],"synonyms":[{"name":"normal nuclear envelope morphology during mitosis during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during mitotic M phase","type":"related"},{"name":"normal nuclear envelope morphology during mitotic nuclear division","type":"exact"},{"name":"normal nuclear membrane morphology during mitosis","type":"narrow"}],"termid":"FYPO:0003780","terms_by_termid":{"FYPO:0003780":null}}


id: PR:Q9P7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.03","synonyms":[{"name":"Spom972h-SPCC24B10.03","type":"exact"}],"termid":"PR:Q9P7K2"}


id: PBO:0039413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 16","termid":"PBO:0039413"}


id: GO:0016164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Mo-molybdopterin oxidoreductase activity (obsolete GO:0016164)","synonyms":[{"name":"Mo-molybdopterin oxidoreductase activity","type":"exact"},{"name":"molybdopterin oxidoreductase activity","type":"exact"}],"termid":"GO:0016164"}


id: FYPO:0003509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing selenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on selenite ion","synonyms":[{"name":"normal cell population growth in presence of selenite ion","type":"exact"},{"name":"normal cell population growth on selenite ion","type":"exact"},{"name":"normal cellular response to selenite ion","type":"related"},{"name":"normal growth on selenite","type":"exact"},{"name":"normal vegetative cell population growth on selenite ion","type":"exact"}],"termid":"FYPO:0003509"}


id: PBO:0065726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 3","termid":"PBO:0065726"}


id: PBO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033790"}


id: GO:0015358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amino acid/choline transmembrane transporter activity (obsolete GO:0015358)","synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"exact"}],"termid":"GO:0015358"}


id: GO:0097115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals.","definition_xrefs":["GOC:sjp","GOC:BHF","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"presynaptic membrane assembly","termid":"GO:0097105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"neurexin clustering involved in presynaptic membrane assembly","synonyms":[{"name":"Nrxn clustering","type":"broad"},{"name":"neurexin clustering","type":"broad"},{"name":"presynaptic neurexin clustering","type":"exact"}],"termid":"GO:0097115"}


id: GO:1903174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fatty alcohol.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:24036493","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty alcohol catabolic process","synonyms":[{"name":"fatty alcohol breakdown","type":"exact"},{"name":"fatty alcohol catabolism","type":"exact"},{"name":"fatty alcohol degradation","type":"exact"}],"termid":"GO:1903174"}


id: GO:0015856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytosine, 4-amino-2-hydroxypyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cytosine transport","synonyms":[{"name":"cytosine transmembrane transport","type":"exact"}],"termid":"GO:0015856"}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: GO:0052737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + H2O + pyruvate = a ubiquinol + acetate + CO2.","definition_xrefs":["EC:1.2.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, with a quinone or similar compound as acceptor","termid":"GO:0052738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyruvate dehydrogenase (quinone) activity","secondary_identifiers":["RHEA:27405","MetaCyc:RXN-11496","KEGG_REACTION:R03145"],"synonyms":[{"name":"pyruvate dehydrogenase activity","type":"broad"},{"name":"pyruvate:ubiquinone oxidoreductase activity","type":"exact"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic dehydrogenase activity","type":"broad"}],"termid":"GO:0052737"}


id: GO:0140103
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of a biochemical reaction at physiological temperatures in which one of the substrates is a glycoprotein.","definition_xrefs":["GOC:pdt","GOC:molecular_function_refactoring"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"catalytic activity, acting on a glycoprotein","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140103","terms_by_termid":{"GO:0047220":null}}


id: GO:0075197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a neck-like structure for the purpose of penetration into its host organism. The neck-like structure connects haustorium mother cell and haustorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["Wikipedia:Haustorium","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haustorium neck formation","synonyms":[{"name":"formation of symbiont haustorium neck for entry into host","type":"related"},{"name":"symbiont haustorium neck formation for entry into host","type":"related"}],"termid":"GO:0075197"}


id: PBO:0064687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 23","termid":"PBO:0064687"}


id: GO:0102674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-methylenelophenol + a demethylated methyl acceptor = 9xi-episterol + a methylated methyl acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-demethylase activity (obsolete GO:0102674)","secondary_identifiers":["MetaCyc:RXN-4181"],"termid":"GO:0102674"}


id: PBO:0011082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-hydroxybenzoate--polyprenyltransferase Ppt1","termid":"PBO:0011082"}


id: GO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","PMID:14701881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition","synonyms":[{"name":"EMT","type":"exact"},{"name":"epithelial-mesenchymal transition","type":"exact"},{"name":"mesenchymal cell differentiation from epithelial cell","type":"exact"}],"termid":"GO:0001837"}


id: GO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and pyruvate.","definition_xrefs":["GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"NADH metabolic process","termid":"GO:0006734"},{"relation_name":"is_a","term_name":"ATP metabolic process","termid":"GO:0046034"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0044281","GO:0006790","GO:0006091"],"is_obsolete":false,"name":"sulphoglycolysis","synonyms":[{"name":"sulfoglycolysis","type":"exact"}],"termid":"GO:0061722"}


id: PBO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 3","termid":"PBO:0043724"}


id: PBO:0077577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 2","termid":"PBO:0077577"}


id: PBO:0029122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased","termid":"PBO:0029122"}


id: PBO:0072158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 35","termid":"PBO:0072158"}


id: PBO:0067855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 157","termid":"PBO:0067855"}


id: FYECO:0000103
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115615],"is_not":false,"summary":null,"term":"FYECO:0000103"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown in liquid culture.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00514":null},"genotype_count":1,"genotypes_by_uniquename":{"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"liquid culture","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYECO:0000103","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYPO_EXT:0000001":null}}


id: PBO:0017438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transport_of","termid":"PBO:0017438"}


id: _global:starts_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","secondary_identifiers":["RO:0002091"],"termid":"_global:starts_during"}


id: PBO:0068040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 345","termid":"PBO:0068040"}


id: GO:0022893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the low-affinity transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transporter activity","termid":"GO:0015196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity tryptophan transmembrane transporter activity","secondary_identifiers":["GO:0015510"],"synonyms":[{"name":"low-affinity tryptophan permease activity","type":"related"}],"termid":"GO:0022893"}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: GO:1901295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901295)","synonyms":[{"name":"regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901295"}


id: FYPO:0000008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is abnormal. Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["PomBase:mah","GO:0007131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic recombination","synonyms":[{"name":"DNA recombination defects, meiotic","type":"exact"},{"name":"abnormal meiotic DNA recombination","type":"exact"},{"name":"abnormal reciprocal meiotic recombination","type":"exact"},{"name":"meiotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000008"}


id: PBO:0089874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron-specific pre-mRNA splicing-ubiquitin fusion protein Sde2","termid":"PBO:0089874"}


id: PBO:0041513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 putative open reading frame 32","termid":"PBO:0041513"}


id: PR:000027538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste11 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11","synonyms":[{"name":"STE11","type":"related"},{"name":"STEX","type":"related"},{"name":"ste11","type":"exact"}],"termid":"PR:000027538"}


id: MOD:00781
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N2-acetyl-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-acetyl-L-histidine","synonyms":[{"name":"AcHis","type":"exact"}],"termid":"MOD:00781"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: PBO:0061453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 1","termid":"PBO:0061453"}


id: PBO:0054374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1768","termid":"PBO:0054374"}


id: GO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050725","GO:0050718"],"synonyms":[{"name":"activation of interleukin-1 beta production","type":"narrow"},{"name":"positive regulation of IL-1 beta production","type":"exact"},{"name":"positive regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 beta secretion","type":"narrow"},{"name":"stimulation of interleukin-1 beta production","type":"narrow"},{"name":"up regulation of interleukin-1 beta production","type":"exact"},{"name":"up-regulation of interleukin-1 beta production","type":"exact"},{"name":"upregulation of interleukin-1 beta production","type":"exact"}],"termid":"GO:0032731"}


id: PBO:0040545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 3","termid":"PBO:0040545"}


id: PBO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-8","termid":"PBO:0052885"}


id: GO:0080130
data:
  {"annotated_genes":["SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94924],"is_not":false,"summary":null,"term":"GO:0080130"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = 3-phenylpyruvate + L-glutamate.","definition_xrefs":["RHEA:25152","PMID:18394996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-phenylalanine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00694","MetaCyc:RXN-10814"],"synonyms":[{"name":"L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080130","terms_by_termid":{"GO:0080130":null}}


id: PBO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 2","termid":"PBO:0042948"}


id: PBO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.2","termid":"PBO:0000837"}


id: PBO:0111298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp40","termid":"PBO:0111298"}


id: PBO:0017523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5 (predicted)","termid":"PBO:0017523"}


id: GO:0045545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells.","definition_xrefs":["GOC:go_curators","PMID:9355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"syndecan binding","termid":"GO:0045545"}


id: PBO:0086786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization","termid":"PBO:0086786"}


id: PBO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog B","termid":"PBO:0047497"}


id: PBO:0080434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 18","termid":"PBO:0080434"}


id: GO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia coupling link that is composed of a fine filament present in developing stereocilia that couples the bases of individual stereocilia to one another. They are not present in mature stereocilia.","definition_xrefs":["PMID:17567809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia ankle link","termid":"GO:0002141"}


id: GO:0060257
data:
  {"annotated_genes":["SJAG_03473","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100100,102779],"is_not":false,"summary":null,"term":"GO:0060257"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the non-sexual aggregation of single-celled organisms.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of flocculation","termid":"GO:0060256"},{"relation_name":"negatively_regulates","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00926":null,"SJAG_03473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901134"],"synonyms":[{"name":"negative regulation of coflocculation","type":"narrow"}],"termid":"GO:0060257","terms_by_termid":{"GO:0060257":null}}


id: GO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex II (obsolete GO:0045274)","synonyms":[{"name":"respiratory chain complex II","type":"broad"}],"termid":"GO:0045274"}


id: PBO:0003391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase Agn2","termid":"PBO:0003391"}


id: GO:0001411
data:
  {"annotated_genes":["SJAG_04960","SJAG_03915","SJAG_03625","SJAG_04624","SJAG_01196","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115646,115648,115650,115652,115654,115656],"is_not":false,"summary":null,"term":"GO:0001411"}]},"cv_name":"cellular_component","definition":"The end, or tip, of a fungal hypha, where polarized growth occurs during hyphal elongation.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_03011":null,"SJAG_03625":null,"SJAG_03915":null,"SJAG_04624":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal tip","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0001411","terms_by_termid":{"GO:0001411":null}}


id: GO:0098696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurotransmitter receptor localization to postsynaptic specialization membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"neurotransmitter receptor localization to postsynaptic specialization membrane","termid":"GO:0099645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurotransmitter receptor localization to postsynaptic specialization membrane","termid":"GO:0098696"}


id: PBO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 4","termid":"PBO:0047641"}


id: GO:0097069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"},{"relation_name":"is_a","term_name":"response to thyroxine","termid":"GO:0097068"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroxine stimulus","synonyms":[{"name":"cellular response to T4 stimulus","type":"exact"}],"termid":"GO:0097069"}


id: PBO:0077281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 19","termid":"PBO:0077281"}


id: GO:0006065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"UDP-glucuronate metabolic process","termid":"GO:0046398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-glucuronate biosynthetic process","synonyms":[{"name":"UDP-glucuronate anabolism","type":"exact"},{"name":"UDP-glucuronate biosynthesis","type":"exact"},{"name":"UDP-glucuronate formation","type":"exact"},{"name":"UDP-glucuronate synthesis","type":"exact"}],"termid":"GO:0006065"}


id: PBO:0086133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa1p and possibly Iba57p; localizes to the mitochondrial intermembrane space, overexpression of ISA2 suppresses grx5 mutations","termid":"PBO:0086133"}


id: GO:0009869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction between a pollen grain and pistil that results in inhibition of pollen germination/growth.","definition_xrefs":["PMID:10375566"],"gene_count":0,"genotype_count":0,"name":"obsolete incompatible pollen-pistil interaction (obsolete GO:0009869)","synonyms":[{"name":"incompatible pollen-pistil interaction","type":"exact"}],"termid":"GO:0009869"}


id: PBO:0078166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta constant 1","termid":"PBO:0078166"}


id: PBO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_triage_status","termid":"PBO:0034029"}


id: PBO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 13","termid":"PBO:0052540"}


id: GO:0061542
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111382],"is_not":false,"summary":null,"term":"GO:0061542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 3-demethylubiquinol = S-adenosyl-L-homocysteine + a ubiquinol.","definition_xrefs":["PMID:23190198","RHEA:44380","GOC:dph","PMID:10777520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"3-demethylubiquinol-n 3-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.64","Reactome:R-HSA-2162186"],"synonyms":[{"name":"2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone methyltransferase","type":"narrow"},{"name":"5-demethylubiquinone-10 methyltransferase","type":"narrow"},{"name":"5-demethylubiquinone-9 methyltransferase","type":"narrow"},{"name":"OMHMB-methyltransferase","type":"related"},{"name":"S-adenosyl-L-methionine:2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone-O-methyltransferase","type":"related"}],"termid":"GO:0061542","terms_by_termid":{"GO:0061542":null}}


id: PBO:0069641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 918, pseudogene","termid":"PBO:0069641"}


id: PBO:0067611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 783, pseudogene","termid":"PBO:0067611"}


id: PBO:0038673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL6 antisense RNA 1","termid":"PBO:0038673"}


id: PBO:0076339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 7","termid":"PBO:0076339"}


id: PBO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46 (predicted)","termid":"PBO:0003280"}


id: GO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase II preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["PMID:15020047","GOC:txnOH","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription open complex formation","termid":"GO:0001112"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription open complex formation at RNA polymerase II promoter","synonyms":[{"name":"RNA polymerase II promoter melting","type":"exact"},{"name":"transcriptional open complex formation at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001113"}


id: GO:0102340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxybehenoyl-CoA(4-) + NADP(3-) = 3-oxodocosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-behenoyl-CoA reductase activity (obsolete GO:0102340)","termid":"GO:0102340"}


id: GO:0102065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + gamma-patchoulene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete patchoulene synthase activity (obsolete GO:0102065)","termid":"GO:0102065"}


id: PBO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis","termid":"PBO:0000123"}


id: GO:0015521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (bicyclomycin or sulfathiazole)(in) + H+(out) = (bicyclomycin or sulfathiazole)(out) + H+(in).","definition_xrefs":["TC:2.A.1.2.7"],"gene_count":0,"genotype_count":0,"name":"obsolete bicyclomycin/sulfathiazole:hydrogen antiporter activity (obsolete GO:0015521)","synonyms":[{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"exact"},{"name":"bicyclomycin/sulfathiazole:proton antiporter activity","type":"exact"},{"name":"bicyclomycin/sulphathiazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015521"}


id: GO:0016125
data:
  {"annotated_genes":["SJAG_01474","SJAG_02719","SJAG_04018","SJAG_00453","SJAG_02982","SJAG_01307","SJAG_03509","SJAG_02855","SJAG_00413","SJAG_03235","SJAG_04865","SJAG_04059","SJAG_03018","SJAG_03249","SJAG_02044","SJAG_00770","SJAG_03598","SJAG_00261","SJAG_00158","SJAG_03929","SJAG_04499","SJAG_03531","SJAG_04270","SJAG_00624","SJAG_04217","SJAG_03715","SJAG_00370","SJAG_04810","SJAG_00717","SJAG_02104","SJAG_04790","SJAG_02068","SJAG_04049","SJAG_03750","SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98032],"is_not":false,"summary":null,"term":"GO:0016125"},{"annotations":[91205,108332,101000,104373,106614,95420,94606,111744,89174,100811,103053,107832,113055,93162,85063,86245,88070,89120,104239,85322,104060,85286,105771,101231,111412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[100541,111585,115377,85355,99900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[90451],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[106378],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[106379],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[85153,85152,102368],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol metabolism","type":"exact"}],"termid":"GO:0016125","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0058161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4455","termid":"PBO:0058161"}


id: GO:1901218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:bm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of holin activity (obsolete GO:1901218)","synonyms":[{"name":"antiholin activity","type":"exact"},{"name":"down regulation of holin activity","type":"exact"},{"name":"down-regulation of holin activity","type":"exact"},{"name":"downregulation of holin activity","type":"exact"},{"name":"inhibition of holin activity","type":"narrow"},{"name":"phage antiholin","type":"narrow"}],"termid":"GO:1901218"}


id: MOD:00283
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine.","definition_xrefs":["PubMed:11349130","RESID:AA0278","PubMed:10550045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine","synonyms":[{"name":"(alpha)- ([([(5S)-5-amino-5-carboxypentyl]amino)propyl][(methyl)amino])-(omega)-methyl poly[propane-1,3-diyl(methylimino)]","type":"exact"},{"name":"MOD_RES N6-poly(methylaminopropyl)lysine","type":"exact"},{"name":"N6-[3-([(omega)-(dimethyl)aminopropyl-poly(3-[methylamino]propyl)]amino)propyl]lysine","type":"exact"},{"name":"N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine","type":"exact"},{"name":"lysine derivative Lys(x)","type":"exact"},{"name":"silaffin polycationic lysine derivative","type":"exact"}],"termid":"MOD:00283"}


id: PBO:0030574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_leucine_level","termid":"PBO:0030574"}


id: FYPO:0001913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ubiquitin ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abolished ubiquitin ligase activity","synonyms":[{"name":"abolished ubiquitin-protein ligase activity","type":"exact"},{"name":"ubiquitin ligase activity abolished","type":"exact"}],"termid":"FYPO:0001913"}


id: GO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate = H2O + mesaconate.","definition_xrefs":["RHEA:13529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-2-methylmalate dehydratase activity","secondary_identifiers":["EC:4.2.1.34","KEGG_REACTION:R03693","MetaCyc:S-2-METHYLMALATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"(+)-citramalate hydro-lyase activity","type":"related"},{"name":"(+)-citramalic hydro-lyase activity","type":"related"},{"name":"(S)-2-methylmalate hydro-lyase (2-methylfumarate-forming)","type":"related"},{"name":"(S)-2-methylmalate hydro-lyase activity","type":"related"},{"name":"L-citramalate hydrolase activity","type":"related"},{"name":"citramalate dehydratase activity","type":"related"},{"name":"mesaconase activity","type":"related"},{"name":"mesaconate hydratase activity","type":"related"},{"name":"mesaconate mesaconase activity","type":"related"}],"termid":"GO:0047510"}


id: FYPO:0009105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are mislocalized during telophase of the mitotic cell cycle.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized nucleus during mitotic telophase","synonyms":[{"name":"abnormal nuclei location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus position during mitotic telophase","type":"exact"},{"name":"abnormal nucleus positioning during mitotic telophase","type":"exact"},{"name":"mislocalised nuclei during mitotic telophase","type":"exact"},{"name":"mislocalised nucleus during mitotic telophase","type":"exact"}],"termid":"FYPO:0009105"}


id: GO:0140915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a zymogen granule.","definition_xrefs":["PMID:20133611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into secretory vesicle","termid":"GO:0140914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc ion import into zymogen granule","termid":"GO:0140915"}


id: GO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular multi-enzyme complex containing up to 11 different enzymes aligned on a non-catalytic scaffolding glycoprotein. Functions to hydrolyze cellulose.","definition_xrefs":["GOC:jl","PMID:20373916","PMID:11601609","PMID:15197390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular membraneless organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"cellulosome","secondary_identifiers":["Wikipedia:Cellulosome","GO:1990296"],"synonyms":[{"name":"scaffoldin complex","type":"narrow"}],"termid":"GO:0043263"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: GO:1990457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle involved in the degradation of peroxisome by macropexophagy.","definition_xrefs":["PMID:22536249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pexophagosome","termid":"GO:1990457"}


id: PBO:0056588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDC1 antisense RNA 1","termid":"PBO:0056588"}


id: PBO:0084277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein localized to mitochondria; required for sporulation and maintaining sphingolipid content; similar to SUR7; FMP45 has a paralog, YNL194C, that arose from the whole genome duplication","termid":"PBO:0084277"}


id: PBO:0057140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR219A2 host gene","termid":"PBO:0057140"}


id: GO:0070216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an isoform of the MDM4 protein, a negative regulator of p53.","definition_xrefs":["GOC:nln","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MDM4 binding (obsolete GO:0070216)","synonyms":[{"name":"MDM4 binding","type":"exact"},{"name":"MDMX binding","type":"exact"}],"termid":"GO:0070216"}


id: PBO:0017902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase Fol1 (predicted)","termid":"PBO:0017902"}


id: GO:0046385
data:
  {"annotated_genes":["SJAG_04657","SJAG_04665","SJAG_04627","SJAG_03771","SJAG_02948","SJAG_00885","SJAG_02874","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[103791,89013,92059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[85962,104905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[89014,85963,114526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[114527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[95558,104906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate anabolism","type":"exact"},{"name":"deoxyribose phosphate biosynthesis","type":"exact"},{"name":"deoxyribose phosphate formation","type":"exact"},{"name":"deoxyribose phosphate synthesis","type":"exact"}],"termid":"GO:0046385","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: PBO:0071227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 68","termid":"PBO:0071227"}


id: PBO:0078535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 27","termid":"PBO:0078535"}


id: PBO:0073433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 3","termid":"PBO:0073433"}


id: GO:0070092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of glucagon secretion","termid":"GO:0070092"}


id: PATO:0001406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binucleate","termid":"PATO:0001406"}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: FYPO:0004187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein export from the nucleus does not occur during a cellular response to hydroxyurea. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein export from nucleus","termid":"FYPO:0001921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein export from nucleus during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein export from nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"absent protein export from nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"protein export from nucleus abolished during cellular response to hydroxyurea","type":"exact"},{"name":"protein export from nucleus abolished during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0004187"}


id: PATO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001065 relative stiffness (obsolete PATO:0001065)","termid":"PATO:0001065"}


id: GO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:bf","CL:0000850","PMID:21106844","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of serotonergic neuron axon","synonyms":[{"name":"chemorepulsion of 5-HT axon","type":"exact"},{"name":"chemorepulsion of serotonergic axon","type":"related"}],"termid":"GO:0036519"}


id: PBO:0053016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 4","termid":"PBO:0053016"}


id: GO:0010637
data:
  {"annotated_genes":["SJAG_00855","SJAG_00304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98597,102981],"is_not":false,"summary":null,"term":"GO:0010637"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial fusion","termid":"GO:0010635"},{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010637","terms_by_termid":{"GO:0010637":null}}


id: PBO:0090675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsf1","termid":"PBO:0090675"}


id: PBO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Srb8","termid":"PBO:0000126"}


id: PBO:0064833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10 pseudogene 1","termid":"PBO:0064833"}


id: PBO:0075290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 30","termid":"PBO:0075290"}


id: PBO:0079321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 11","termid":"PBO:0079321"}


id: GO:1990394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell wall damage. The process begins with detection of the damage and ends with a change in state or activity of the cell.","definition_xrefs":["PMID:17287531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell wall damage","termid":"GO:1990394"}


id: GO:0008492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP generating peptide activity (obsolete GO:0008492)","synonyms":[{"name":"cAMP generating peptide activity","type":"exact"},{"name":"cyclic AMP generating peptide activity","type":"exact"}],"termid":"GO:0008492"}


id: PBO:0089776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh2","termid":"PBO:0089776"}


id: GO:0106126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a reservosome.","definition_xrefs":["PMID:22425988","PMID:15521631","PMID:18452191","PMID:19288526","GOC:ach","PMID:12204365","PMID:21818313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"reservosome membrane","termid":"GO:0106126"}


id: GO:0051602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to electrical stimulus","synonyms":[{"name":"response to electricity","type":"related"}],"termid":"GO:0051602"}


id: PBO:0016523
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin HorseTail","termid":"PBO:0016523"}


id: PBO:0068819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 57, pseudogene","termid":"PBO:0068819"}


id: GO:1902964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000059","GOC:sjp","GOC:TermGenie","PMID:18362153"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902964)","synonyms":[{"name":"activation of metalloendopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902964"}


id: MOD:01564
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01564"}


id: GO:0150178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"}


id: _global:axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axis_of","secondary_identifiers":["GOREL:0001000"],"termid":"_global:axis_of"}


id: FYPO:0004027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004027"}


id: GO:1902519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a docetaxel trihydrate stimulus.","definition_xrefs":["GOC:dw","PMID:23648065","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to docetaxel trihydrate","synonyms":[{"name":"response to docetaxel","type":"related"}],"termid":"GO:1902519"}


id: GO:0047108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (R)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["RHEA:24352","EC:1.1.1.279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.55-RXN","KEGG_REACTION:R04105"],"synonyms":[{"name":"(R)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (R)-reductase activity","type":"related"},{"name":"ethyl-(R)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047108"}


id: PBO:0113435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during the induction of sporulation; homologous to human ZCH13H3, a subunit of the mammalian m6A methyltransferase complex","termid":"PBO:0113435"}


id: PBO:0076995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP9 antisense RNA 1","termid":"PBO:0076995"}


id: PBO:0089889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase, anaerobic","termid":"PBO:0089889"}


id: PATO:0001462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a cell's plasma membrane by virtue of the electrical potential difference across it.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Membrane_potential"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric potential","termid":"PATO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane potential","termid":"PATO:0001462"}


id: GO:1902056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (25S)-Delta(7)-dafachronate.","definition_xrefs":["PMID:22505847","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(25S)-Delta(7)-dafachronate metabolic process","synonyms":[{"name":"(25S)-Delta(7)-dafachronate metabolism","type":"exact"}],"termid":"GO:1902056"}


id: GO:1901038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanidin 3-O-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:21899608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside metabolic process","synonyms":[{"name":"cyanidin 3-O-beta-D-glucoside metabolic process","type":"exact"},{"name":"cyanidin 3-O-beta-D-glucoside metabolism","type":"exact"}],"termid":"GO:1901038"}


id: PBO:0073102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 6","termid":"PBO:0073102"}


id: PBO:0059234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L4","termid":"PBO:0059234"}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: GO:0046284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of anthocyanins, any member of a group of intensely colored soluble glycosides of anthocyanidins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"},{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin-containing compound catabolic process","synonyms":[{"name":"anthocyanin breakdown","type":"exact"},{"name":"anthocyanin catabolic process","type":"exact"},{"name":"anthocyanin catabolism","type":"exact"},{"name":"anthocyanin degradation","type":"exact"}],"termid":"GO:0046284"}


id: FYPO:0002067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows more slowly than normal when the population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"slow cell population growth during recovery from stationary phase","termid":"FYPO:0002067"}


id: GO:0098525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction that functions in the excitation of somatic muscle myotubes, such as an arthropod somatic muscle cells.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory neuromuscular junction","termid":"GO:0098520"},{"relation_name":"is_a","term_name":"neuromuscular junction of somatic muscle myotube","termid":"GO:0098524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory neuromuscular junction of somatic myotube","termid":"GO:0098525"}


id: GO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of rhamnose catabolic process","synonyms":[{"name":"regulation of rhamnose breakdown","type":"exact"},{"name":"regulation of rhamnose catabolism","type":"exact"},{"name":"regulation of rhamnose degradation","type":"exact"}],"termid":"GO:0043463"}


id: PBO:0031078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_cytoskeleton_organization_phenotype","termid":"PBO:0031078"}


id: PBO:0047847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 3","termid":"PBO:0047847"}


id: PBO:0067246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 319, pseudogene","termid":"PBO:0067246"}


id: GO:0102130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a malonyl-[acp] = S-adenosyl-L-homocysteine + a malonyl-[acp] methyl ester.","definition_xrefs":["RHEA:17105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"malonyl-CoA methyltransferase activity","secondary_identifiers":["EC:2.1.1.197","MetaCyc:RXN-11475"],"termid":"GO:0102130"}


id: GO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between the extracellular matrix and a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-cell signaling","synonyms":[{"name":"cell-extracellular matrix signalling","type":"exact"},{"name":"extracellular matrix-cell signalling","type":"exact"}],"termid":"GO:0035426"}


id: GO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"negatively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated T cell proliferation","synonyms":[{"name":"down regulation of activated T cell proliferation","type":"exact"},{"name":"down-regulation of activated T cell proliferation","type":"exact"},{"name":"downregulation of activated T cell proliferation","type":"exact"},{"name":"inhibition of activated T cell proliferation","type":"narrow"},{"name":"negative regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of activated T-cell proliferation","type":"exact"},{"name":"negative regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046007"}


id: FYECO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nickel was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited nickel","termid":"FYECO:0000197"}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"},{"name":"normal spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004396"}


id: GO:0010772
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104194,106828],"is_not":false,"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0140013","GO:0044085","GO:0006281","GO:0065003","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010772","terms_by_termid":{"GO:0010772":null}}


id: PBO:0083129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine dehydratase (aka D-serine ammonia-lyase); converts D-serine to pyruvate and ammonia by a reaction dependent on pyridoxal 5'-phosphate and zinc; may play a role in D-serine detoxification; L-serine is not a substrate","termid":"PBO:0083129"}


id: FYPO:0009015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable when grown with glycerol as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population viability","termid":"FYPO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population viability on glycerol carbon source","synonyms":[{"name":"increased cell population viability during vegetative growth on glycerol carbon source","type":"exact"}],"termid":"FYPO:0009015"}


id: GO:0042202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-cyclopropylmelamine, a triazine compound commonly used as an insecticide.","definition_xrefs":["UM-BBD_pathwayID:cpm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-cyclopropylmelamine metabolic process","termid":"GO:0042201"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-cyclopropylmelamine catabolic process","synonyms":[{"name":"N-cyclopropylmelamine breakdown","type":"exact"},{"name":"N-cyclopropylmelamine catabolism","type":"exact"},{"name":"N-cyclopropylmelamine degradation","type":"exact"},{"name":"cyromazine catabolic process","type":"exact"},{"name":"cyromazine catabolism","type":"exact"}],"termid":"GO:0042202"}


id: PBO:0068943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 187, pseudogene","termid":"PBO:0068943"}


id: GO:0047392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + CMP-N-acylneuraminate = N-acylneuraminate + CMP.","definition_xrefs":["MetaCyc:3.1.4.40-RXN","EC:3.1.4.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"CMP-N-acylneuraminate phosphodiesterase activity","secondary_identifiers":["RHEA:20185"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydrolase activity","type":"related"},{"name":"CMP-N-acylneuraminate N-acylneuraminohydrolase activity","type":"related"},{"name":"CMP-N-acylneuraminic acid hydrolase activity","type":"related"},{"name":"CMP-sialate hydrolase activity","type":"related"},{"name":"CMP-sialic acid hydrolase activity","type":"related"},{"name":"cytidine monophosphate-N-acetylneuraminic acid hydrolase activity","type":"related"},{"name":"cytidine monophosphosialate hydrolase activity","type":"related"},{"name":"cytidine monophosphosialic hydrolase activity","type":"related"}],"termid":"GO:0047392"}


id: GO:0007021
data:
  {"annotated_genes":["SJAG_00983","SJAG_01526","SJAG_01545","SJAG_02672","SJAG_00505","SJAG_03463","SJAG_04074","SJAG_02040","SJAG_02270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85178,89832,90061,93125,93330,94080,97122,98999,102772],"is_not":false,"summary":null,"term":"GO:0007021"}]},"cv_name":"biological_process","definition":"The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00505":null,"SJAG_00983":null,"SJAG_01526":null,"SJAG_01545":null,"SJAG_02040":null,"SJAG_02270":null,"SJAG_02672":null,"SJAG_03463":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"tubulin complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tubulin assembly","type":"exact"},{"name":"tubulin folding","type":"related"},{"name":"tubulin-specific chaperone activity","type":"related"}],"termid":"GO:0007021","terms_by_termid":{"GO:0007021":null}}


id: PBO:0046101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 4","termid":"PBO:0046101"}


id: MOD:01629
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms cyclo[(prolylserin)-O-yl] cysteinate by the natural process of cross-linking an L-cysteine residue an L-proline residue, and an L-serine residue, or by effectively modifying a cysteine residue.","definition_xrefs":["RESID:AA0489","PubMed:7961166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01629"}


id: PBO:0059469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 1","termid":"PBO:0059469"}


id: PBO:0067309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 395, pseudogene","termid":"PBO:0067309"}


id: PBO:0073365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1 pseudogene 1","termid":"PBO:0073365"}


id: GO:0033444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"AAG codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033444"}


id: GO:0048891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lateral line ganglion neuron.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"},{"relation_name":"part_of","term_name":"lateral line ganglion development","termid":"GO:0048890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line ganglion neuron differentiation","synonyms":[{"name":"gLL neuron differentiation","type":"exact"}],"termid":"GO:0048891"}


id: FYPO:0007468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during G0","termid":"FYPO:0007467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation during G0","synonyms":[{"name":"increased histone H3 K9 dimethylation during G0","type":"exact"},{"name":"increased histone H3-K9 dimethylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 dimethylation during quiescence","type":"exact"},{"name":"increased histone H3K9me2 during G0","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation during G0","type":"exact"}],"termid":"FYPO:0007468"}


id: PBO:0058875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10226","termid":"PBO:0058875"}


id: PBO:0055071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2488","termid":"PBO:0055071"}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: PBO:0028671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Sad1_foci_during_response_to_DNA_damage","termid":"PBO:0028671"}


id: PBO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase (predicted)","termid":"PBO:0004965"}


id: GO:1902556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatidylinositol transporter activity.","definition_xrefs":["GOC:TermGenie","PMID:9890948","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol transporter complex","termid":"GO:1902556"}


id: PBO:0031616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_transposition","termid":"PBO:0031616"}


id: PBO:0072033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 3","termid":"PBO:0072033"}


id: PR:Q9USR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec27 gene.","definition_xrefs":["UniProtKB:Q9USR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.05c","synonyms":[{"name":"Spom972h-rec27","type":"exact"},{"name":"meiotically up-regulated gene 41 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR4"}


id: PBO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport","termid":"PBO:0031219"}


id: PBO:0039369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR nuclear protein 1","termid":"PBO:0039369"}


id: PATO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001135 ig d concentration (obsolete PATO:0001135)","termid":"PATO:0001135"}


id: PBO:0082831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ribosomal protein P0 of the ribosomal stalk; involved in interaction between translational elongation factors and the ribosome; phosphorylated on serine 302; homologous to mammalian ribosomal protein LP0 and bacterial L10","termid":"PBO:0082831"}


id: PBO:0053612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 648","termid":"PBO:0053612"}


id: PBO:0083929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fungal-specific protein of unknown function","termid":"PBO:0083929"}


id: PBO:0017588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2 (predicted)","termid":"PBO:0017588"}


id: PBO:0029742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_cell","termid":"PBO:0029742"}


id: PBO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-silencing factor Ers1","termid":"PBO:0005283"}


id: GO:0036028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and thrombin (F2); formation of the complex inhibits the serine protease activity of thrombin.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-thrombin complex","synonyms":[{"name":"PCI-thrombin complex","type":"exact"},{"name":"SERPINA5-thrombin complex","type":"exact"},{"name":"plasma serine protease inhibitor-thrombin complex","type":"exact"},{"name":"protein C inhibitor-F2 complex","type":"exact"},{"name":"protein C inhibitor-coagulation factor II complex","type":"exact"},{"name":"serpin A5-thrombin complex","type":"exact"}],"termid":"GO:0036028"}


id: PBO:0018230
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae BTS1","termid":"PBO:0018230"}


id: GO:0062088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"},{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle contraction","termid":"GO:1904694"},{"relation_name":"negatively_regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vein smooth muscle contraction","termid":"GO:0062088"}


id: GO:0046775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any viral process that results in the inhibition of host cell cytokine production.","definition_xrefs":["PMID:10859382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"},{"relation_name":"is_a","term_name":"modulation by virus of host cytokine production","termid":"GO:0044831"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host cytokine production","termid":"GO:0140133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host cytokine production","synonyms":[{"name":"negative regulation by virus of host cytokine production","type":"exact"}],"termid":"GO:0046775"}


id: PBO:0057448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 568","termid":"PBO:0057448"}


id: PBO:0091866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA snR48","termid":"PBO:0091866"}


id: PBO:0003565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2 (predicted)","termid":"PBO:0003565"}


id: GO:0034469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by any of the membranes of the thin, flattened cisternae that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi lumen","termid":"GO:0005796"},{"relation_name":"part_of","term_name":"Golgi stack","termid":"GO:0005795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Golgi stack lumen","termid":"GO:0034469"}


id: PBO:0079193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 22, pseudogene","termid":"PBO:0079193"}


id: PATO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a male to female advances.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male receptivity","termid":"PATO:0001721"}


id: PBO:0049877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin","termid":"PBO:0049877"}


id: PBO:0040127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 13","termid":"PBO:0040127"}


id: PBO:0069559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 831, pseudogene","termid":"PBO:0069559"}


id: GO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.","definition_xrefs":["PMID:16373184","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"blood microparticle","synonyms":[{"name":"cell membrane microparticle","type":"exact"}],"termid":"GO:0072562"}


id: PBO:0077274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM14B divergent transcript","termid":"PBO:0077274"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: GO:0061968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the asymmetry in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of left/right asymmetry","termid":"GO:0061968"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18093330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: PBO:0112983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory component of the Ccr4-NOT complex; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS","termid":"PBO:0112983"}


id: PBO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 24","termid":"PBO:0061364"}


id: PBO:0044574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine beta-hydroxylase","termid":"PBO:0044574"}


id: PBO:0079045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-7","termid":"PBO:0079045"}


id: PATO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling cheese.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseous","synonyms":[{"name":"cheese-like","type":"exact"}],"termid":"PATO:0002109"}


id: GO:0035045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gradual disintegration of the sperm plasma membrane following insemination. This process is seen in Drosophila after entry of the entire sperm, surrounded by its plasma membrane, into the egg.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"sperm plasma membrane disassembly","synonyms":[{"name":"sperm plasma membrane breakdown","type":"exact"},{"name":"sperm plasma membrane catabolism","type":"exact"},{"name":"sperm plasma membrane degradation","type":"exact"}],"termid":"GO:0035045"}


id: GO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"vitamin D binding","synonyms":[{"name":"calciferol binding","type":"narrow"},{"name":"cholecalciferol binding","type":"narrow"},{"name":"ergocalciferol binding","type":"narrow"}],"termid":"GO:0005499"}


id: PBO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.48","termid":"PBO:0004935"}


id: PR:O74880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An mRNA cap guanine-N7 methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12189:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cap guanine-N7 methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.10","secondary_identifiers":["UniProtKB:O74880"],"synonyms":[{"name":"SPCC330.10","type":"related"},{"name":"Spom972h-RNMT","type":"exact"},{"name":"mRNA (guanine-N(7)-)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74880"}


id: GO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 4 metabotropic glutamate receptor binding","synonyms":[{"name":"type 4 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031801"}


id: MOD:01924
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-octanoyl-L-cysteine.","definition_xrefs":["PubMed:16342964","RESID:AA0584","PubMed:12591875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoylated residue","termid":"MOD:00666"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-octanoyl-L-cysteine","synonyms":[{"name":"(2S)-2-amino-3-(octanoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(octanoylthio)propanoic acid","type":"exact"},{"name":"ACT_SITE Acyl-thioester intermediate","type":"exact"},{"name":"S-octanoyl-L-cysteine","type":"exact"},{"name":"cysteine octanoate thioester","type":"exact"}],"termid":"MOD:01924"}


id: PBO:0088410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg9","termid":"PBO:0088410"}


id: PBO:0092007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine (guu), mitochondrial","termid":"PBO:0092007"}


id: PBO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetamidase (predicted)","termid":"PBO:0003026"}


id: PBO:0083198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene LDB7/YBL006C","termid":"PBO:0083198"}


id: PBO:0108703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp10","termid":"PBO:0108703"}


id: PBO:0017515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 Pre1 (predicted)","termid":"PBO:0017515"}


id: GO:2000857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of corticosteroid hormone secretion","termid":"GO:2000848"},{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"positively_regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of mineralocorticoid secretion","termid":"GO:2000857"}


id: MOD:00884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-2-aminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:1175632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-aminoethylcysteine (Cys)","synonyms":[{"name":"4-thialysine","type":"exact"},{"name":"L-cysteine aziridine adduct","type":"exact"},{"name":"S-(2-aminoethyl)-L-cysteine","type":"exact"}],"termid":"MOD:00884"}


id: FYPO:0001336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects a transport process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"transport phenotype during vegetative growth","synonyms":[{"name":"fission yeast transport phenotype during vegetative growth","type":"exact"},{"name":"transport phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001336"}


id: MOD:00310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N5-methyl-L-arginine.","definition_xrefs":["PubMed:11875433","PubMed:9873020","PubMed:9792625","RESID:AA0305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N5-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(N-methylcarbamimidamido)pentanoic acid","type":"exact"},{"name":"MOD_RES N5-methylarginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N5-carbamimidoyl-N5-methyl-L-ornithine","type":"exact"},{"name":"N5-methyl-L-arginine","type":"exact"},{"name":"N5-methylated L-arginine","type":"exact"},{"name":"N5Me1Arg","type":"exact"},{"name":"delta-N-methylarginine","type":"exact"}],"termid":"MOD:00310"}


id: PBO:0029705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_mononucleate_vegetative_cell_with_mislocalized_septum_near_new_end","termid":"PBO:0029705"}


id: PBO:0059740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 14","termid":"PBO:0059740"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: PBO:0080690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 2","termid":"PBO:0080690"}


id: PBO:0048418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 6","termid":"PBO:0048418"}


id: PBO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor","termid":"PBO:0005004"}


id: PBO:0076585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8B","termid":"PBO:0076585"}


id: GO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosphingosine metabolic process","termid":"GO:0006671"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytosphingosine biosynthetic process","synonyms":[{"name":"phytosphingosine anabolism","type":"exact"},{"name":"phytosphingosine biosynthesis","type":"exact"},{"name":"phytosphingosine formation","type":"exact"},{"name":"phytosphingosine synthesis","type":"exact"}],"termid":"GO:0071602"}


id: PR:P32747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroorotate dehydrogenase (quinone), mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00561","PANTHER:PTHR11938:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.12c","secondary_identifiers":["UniProtKB:P32747"],"synonyms":[{"name":"DHOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHODase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHOdehase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHODH","type":"exact"},{"name":"dihydroorotate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32747"}


id: FYPO:0001187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population reaches stationary phase at, and maintains, a lower cell density than wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell density in stationary phase","synonyms":[{"name":"reduced cell density in stationary phase","type":"exact"}],"termid":"FYPO:0001187"}


id: GO:0099613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the cell-wall.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell wall","termid":"GO:0099613"}


id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: GO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline catabolic process","synonyms":[{"name":"choline breakdown","type":"exact"},{"name":"choline catabolism","type":"exact"},{"name":"choline degradation","type":"exact"}],"termid":"GO:0042426"}


id: PBO:0080014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 16","termid":"PBO:0080014"}


id: PBO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checking DNA Synthesis","termid":"PBO:0005262"}


id: PBO:0048487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSAML antisense RNA 1","termid":"PBO:0048487"}


id: GO:0100066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates induction of conjugation with cellular fusion.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of conjugation with cellular fusion by transcription from RNA polymerase II promoter (obsolete GO:0100066)","termid":"GO:0100066"}


id: FYPO:0004360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is shorter than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"decreased duration of DNA replication checkpoint","type":"broad"},{"name":"decreased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"reduced duration of mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0004360"}


id: GO:0032396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:11858820","GOC:add","PMID:9368779","PMID:9597134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}


id: GO:0051499
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-aminoacyl-tRNA + H2O = a D-alpha-amino acid + a tRNA + H+.  Removal of a D-amino acid from a charged tRNA.","definition_xrefs":["PMID:14527667","RHEA:13953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0140098","GO:0016788","GO:0140101"],"is_obsolete":false,"name":"D-aminoacyl-tRNA deacylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-15041","EC:3.1.1.96"],"termid":"GO:0051499","terms_by_termid":{"GO:0051500":null}}


id: PBO:0088224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase (mitofusin) Fzo1","termid":"PBO:0088224"}


id: PBO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 57","termid":"PBO:0050985"}


id: GO:0046952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ketone body catabolic process","secondary_identifiers":["MetaCyc:PWY66-368"],"synonyms":[{"name":"ketolysis","type":"exact"},{"name":"ketone body breakdown","type":"exact"},{"name":"ketone body catabolism","type":"exact"},{"name":"ketone body degradation","type":"exact"},{"name":"utilization of ketone bodies","type":"exact"}],"termid":"GO:0046952"}


id: PBO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS6 pseudogene 1","termid":"PBO:0075315"}


id: GO:0150024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oxidised low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:aruk","PMID:27607416","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle clearance","synonyms":[{"name":"ox-LDL particle clearance","type":"exact"},{"name":"oxLDL particle clearance","type":"exact"},{"name":"oxidised LDL particle clearance","type":"exact"},{"name":"oxidized LDL particle clearance","type":"exact"},{"name":"oxidized low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:0150024"}


id: CHEBI:35696
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"Chloride of cobalt in which the metal is in the +2 oxidation state.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt dichloride","termid":"CHEBI:35696"}


id: PBO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitophagy","termid":"PBO:0031710"}


id: GO:1990902
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell pole proximal to the most recent cell division.","definition_xrefs":["PMID:8226658","GOC:jh2","PMID:10231492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"new cell pole","termid":"GO:1990902"}


id: SO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a fusion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"fusion","termid":"SO:0000806"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Fusion_gene"],"synonyms":[{"name":"fusion gene","type":"exact"}],"termid":"SO:0000287"}


id: GO:1903002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie","PMID:24345162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"},{"relation_name":"is_a","term_name":"regulation of lipid transport across blood-brain barrier","termid":"GO:1903000"},{"relation_name":"positively_regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"activation of lipid transport across blood brain barrier","type":"narrow"},{"name":"positive regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up-regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"upregulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903002"}


id: PBO:0075980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5A","termid":"PBO:0075980"}


id: PBO:0086923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyridoxine (pyridoxamine) phosphate oxidase; has homologs in E. coli and Myxococcus xanthus; transcription is under the general control of nitrogen metabolism","termid":"PBO:0086923"}


id: PBO:0076849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated actin remodelling kinase 1","termid":"PBO:0076849"}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: GO:0070934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An mRNA stabilization process in which one or more RNA-binding proteins associate with a sequence in the open reading frame called the coding region instability determinant (CRD).","definition_xrefs":["GOC:mah","PMID:19029303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA stabilization","termid":"GO:0048255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"CRD-mediated mRNA stabilization","synonyms":[{"name":"coding region determinant-mediated mRNA stabilization","type":"exact"}],"termid":"GO:0070934"}


id: GO:0003942
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94730],"is_not":false,"summary":null,"term":"GO:0003942"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.","definition_xrefs":["RHEA:21588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.38","MetaCyc:N-ACETYLGLUTPREDUCT-RXN"],"synonyms":[{"name":"N-acetyl-L-glutamate gamma-semialdehyde:NADP oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-glutamate semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamic gamma-semialdehyde dehydrogenase activity","type":"related"},{"name":"NAGSA dehydrogenase activity","type":"broad"},{"name":"reductase, acetyl-gamma-glutamyl phosphate","type":"related"}],"termid":"GO:0003942","terms_by_termid":{"GO:0003942":null}}


id: PBO:0081650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 575","termid":"PBO:0081650"}


id: PBO:0056331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 12","termid":"PBO:0056331"}


id: PR:000027564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylation motif is SQE. Example: UniProtKB:P04909-1, Ser-129, MOD:00046.","definition_xrefs":["PMID:15226425","PMID:21516229","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S128)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-alpha phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hta1/Phos:1","type":"exact"},{"name":"gamma-H2A (Schizosaccharomyces pombe)","type":"related"},{"name":"histone H2A.1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S128)","type":"exact"},{"name":"hta1/Phos:(S129)","type":"exact"}],"termid":"PR:000027564"}


id: PBO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144A","termid":"PBO:0042074"}


id: GO:0061257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular visceral epithelial cell over time, from its formation to the mature structure. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"podocyte development","termid":"GO:0072015"},{"relation_name":"part_of","term_name":"mesonephric podocyte differentiation","termid":"GO:0061256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric podocyte development","synonyms":[{"name":"mesonephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:0061257"}


id: PBO:0043885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich with EGF like domains 2","termid":"PBO:0043885"}


id: PBO:0074988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-30","termid":"PBO:0074988"}


id: PBO:0075381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 21","termid":"PBO:0075381"}


id: PBO:0055850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP1 antisense RNA","termid":"PBO:0055850"}


id: GO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD4, a CD marker that occurs on T-helper cells and is involved in MHC class II restricted interactions.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4 biosynthetic process","synonyms":[{"name":"CD4 anabolism","type":"exact"},{"name":"CD4 biosynthesis","type":"exact"},{"name":"CD4 formation","type":"exact"},{"name":"CD4 synthesis","type":"exact"}],"termid":"GO:0045222"}


id: PBO:0086197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis","termid":"PBO:0086197"}


id: PBO:0082854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of the signal recognition particle (SRP) complex; SRP complex functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0082854"}


id: PBO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0031218"}


id: PBO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas ligand","termid":"PBO:0047309"}


id: GO:0099506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along actin filaments within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along actin filament","termid":"GO:0030050"},{"relation_name":"is_a","term_name":"synaptic vesicle cytoskeletal transport","termid":"GO:0099514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle transport along actin filament","termid":"GO:0099506"}


