# terms

id: PBO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.1","termid":"PBO:0000162"}


id: GO:0071658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of IP-10 production","synonyms":[{"name":"regulation of CXCL10 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071658"}


id: GO:0032914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta1 production","termid":"GO:0032908"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta production","termid":"GO:0071636"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta1 production","synonyms":[{"name":"activation of transforming growth factor-beta1 production","type":"narrow"},{"name":"positive regulation of TGF-B1 production","type":"exact"},{"name":"positive regulation of TGFB1 production","type":"exact"},{"name":"stimulation of transforming growth factor-beta1 production","type":"narrow"},{"name":"up regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"up-regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"upregulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032914"}


id: PATO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000064 absolute percentage (obsolete PATO:0000064)","termid":"PATO:0000064"}


id: GO:0101028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the surface tension of a liquid.","definition_xrefs":["PMID:20949060","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of liquid surface tension (obsolete GO:0101028)","synonyms":[{"name":"positive regulation of surface tension of a liquid","type":"exact"}],"termid":"GO:0101028"}


id: FYPO:0002228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylethanolamine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylethanolamine level","synonyms":[{"name":"normal cellular PE level","type":"exact"},{"name":"normal cellular phosphatidylethanolamine accumulation","type":"related"},{"name":"normal cellular phosphatidylethanolamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylethanolamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0002228"}


id: PATO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which lacks pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular density","termid":"PATO:0002141"}


id: FYPO:0004424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation (obsolete FYPO:0004424)","synonyms":[{"name":"increased peptidyl-threonine phosphorylation","type":"exact"},{"name":"increased threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004424"}


id: CHEBI:28786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraquat dichloride","termid":"CHEBI:28786"}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: GO:0016432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA uridine = 5'-methylthioadenosine + tRNA 3-(3-amino-3-carboxypropyl)-uridine.","definition_xrefs":["EC:2.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0140101","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA-uridine aminocarboxypropyltransferase activity","secondary_identifiers":["MetaCyc:2.5.1.25-RXN","RHEA:12300"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA-uridine 3-(3-amino-3-carboxypropyl)transferase activity","type":"related"}],"termid":"GO:0016432"}


id: PR:O13736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor, arginine/serine-rich 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein sla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.01","secondary_identifiers":["UniProtKB:O13736"],"synonyms":[{"name":"SPAC16E8.01","type":"related"},{"name":"Spom972h-SCAF1","type":"exact"}],"termid":"PR:O13736"}


id: GO:0016586
data:
  {"annotated_genes":["SJAG_04213","SJAG_02869","SJAG_03758","SJAG_01111","SJAG_04755","SJAG_01622","SJAG_02589","SJAG_03576","SJAG_02447","SJAG_03787","SJAG_01016","SJAG_00440","SJAG_00739","SJAG_03944"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84251,84745,87173,88872,90580,90725,90781,92458,101098,101547,107131,109642,110905,111764],"is_not":false,"summary":null,"term":"GO:0016586"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains a bromodomain containing-protein, such as yeast Rsc1 or Rsc4 or mammalian PB1/BAF180. The RSC complex is generally recruited to RNA polymerase III promoters and is specifically recruited to RNA polymerase II promoters by transcriptional activators and repressors; it is also involved in non-homologous end joining.","definition_xrefs":["PMID:12672490","PMID:8980231","PMID:11937489","GOC:bhm","PMID:15870268","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_00739":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01622":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03944":null,"SJAG_04213":null,"SJAG_04755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RSC-type complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070604"],"synonyms":[{"name":"PBAF complex","type":"exact"},{"name":"Polybromo- and BAF containing complex","type":"exact"},{"name":"SWI/SNF complex B","type":"exact"}],"termid":"GO:0016586","terms_by_termid":{"GO:0016586":null}}


id: PBO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSF2RB pseudogene 1","termid":"PBO:0043988"}


id: GO:0048385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"regulation of RAR signaling pathway","type":"exact"},{"name":"regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048385"}


id: PBO:0049663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone pseudogene 1","termid":"PBO:0049663"}


id: GO:0006471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["RESID:AA0168","RESID:AA0231","RESID:AA0040","RESID:AA0237","RESID:AA0169","RESID:AA0295","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete protein ADP-ribosylation (obsolete GO:0006471)","synonyms":[{"name":"protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0006471"}


id: GO:0140323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(in) + solute(out) = anion(out) + solute(in).","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:monoatomic anion antiporter activity (obsolete GO:0140323)","synonyms":[{"name":"solute:anion antiporter activity","type":"exact"}],"termid":"GO:0140323"}


id: PBO:0088468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase gamma subunit","termid":"PBO:0088468"}


id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: PBO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 5","termid":"PBO:0061953"}


id: PBO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain","termid":"PBO:0001327"}


id: PBO:0017025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial microtubule binder Mmb1","termid":"PBO:0017025"}


id: PBO:0059420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 6","termid":"PBO:0059420"}


id: GO:1902201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bacterial-type flagellum-dependent cell motility.","definition_xrefs":["GOC:cilia","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum-dependent cell motility","termid":"GO:1902021"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bacterial-type flagellum-dependent cell motility","synonyms":[{"name":"down regulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"down regulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"down-regulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"down-regulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"downregulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"downregulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"inhibition of bacterial-type flagellar cell motility","type":"narrow"},{"name":"inhibition of flagellin-based flagellar cell motility","type":"exact"},{"name":"negative regulation of bacterial-type flagellar cell motility","type":"related"},{"name":"negative regulation of flagellin-based flagellar cell motility","type":"exact"}],"termid":"GO:1902201"}


id: PBO:0039115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha hemoglobin stabilizing protein","termid":"PBO:0039115"}


id: PR:O14109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- maf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III transcription maf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.12c","synonyms":[{"name":"Spom972h-maf1","type":"exact"}],"termid":"PR:O14109"}


id: GO:0048214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"}


id: GO:0102759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + campestanol + O2 + NADPH = 6-deoxycathasterone + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campestanol hydroxylase activity (obsolete GO:0102759)","termid":"GO:0102759"}


id: GO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the spem nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sperm karyosome formation","termid":"GO:0061989"}


id: GO:0051686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the endoplasmic reticulum to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of ER localization","synonyms":[{"name":"establishment of ER localisation","type":"exact"},{"name":"establishment of endoplasmic reticulum localization","type":"exact"}],"termid":"GO:0051686"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: PBO:0065177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROP paired-like homeobox 1","termid":"PBO:0065177"}


id: PBO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline phosphotransferase 1","termid":"PBO:0043057"}


id: PBO:0066475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 2","termid":"PBO:0066475"}


id: PBO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 3","termid":"PBO:0070377"}


id: PBO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0035879"}


id: GO:0047299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-tryptophan = 3-(indol-3-yl)pyruvate + L-phenylalanine.","definition_xrefs":["RHEA:13741","EC:2.6.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tryptophan-phenylpyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01376","MetaCyc:2.6.1.28-RXN"],"synonyms":[{"name":"L-tryptophan-alpha-ketoisocaproate aminotransferase activity","type":"related"},{"name":"L-tryptophan:phenylpyruvate aminotransferase activity","type":"related"},{"name":"tryptophan--phenylpyruvate aminotransferase activity","type":"related"},{"name":"tryptophan-phenylpyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047299"}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: PBO:0058202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4495","termid":"PBO:0058202"}


id: PBO:0029164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation","termid":"PBO:0029164"}


id: PBO:0075991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP family member 1","termid":"PBO:0075991"}


id: PR:O94590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.05","synonyms":[{"name":"Spom972h-sec1","type":"exact"}],"termid":"PR:O94590"}


id: PBO:0017478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coincident_with","termid":"PBO:0017478"}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: GO:0021975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the pons towards target cells in the spinal cord.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons reticulospinal tract morphogenesis","termid":"GO:0021975"}


id: FYPO:0008175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal oxygen consumption","termid":"FYPO:0008175"}


id: PBO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha","termid":"PBO:0050873"}


id: PBO:0079935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 1","termid":"PBO:0079935"}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: GO:0019538
data:
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id: PBO:0066281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member E, pseudogene","termid":"PBO:0066281"}


id: MOD:00372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues with a carbon-carbon bond to form 3'-(3'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["PubMed:8937563","PubMed:14249161","PubMed:637884","PubMed:8702710","DeltaMass:0","RESID:AA0367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(3'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-(6,6'-dihydroxybiphenyl-3,3'-diyl)bis(2-aminopropanoic acid)","type":"exact"},{"name":"3'-(L-tyros-3'-yl)-L-tyrosine","type":"exact"},{"name":"3,3'-BiTyr (Crosslink)","type":"exact"},{"name":"6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-bis(2-aminopropanoic acid)","type":"exact"},{"name":"alpha,alpha'-diamino-6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-dipropanoic acid","type":"exact"},{"name":"bityrosine","type":"exact"},{"name":"o,o-dityrosine","type":"exact"}],"termid":"MOD:00372"}


id: PR:Q10164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.09c","synonyms":[{"name":"Spom972h-rga2","type":"exact"}],"termid":"PR:Q10164"}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11549:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: GO:0006659
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111192],"is_not":false,"summary":null,"term":"GO:0006659"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine anabolism","type":"exact"},{"name":"phosphatidylserine biosynthesis","type":"exact"},{"name":"phosphatidylserine formation","type":"exact"},{"name":"phosphatidylserine synthesis","type":"exact"}],"termid":"GO:0006659","terms_by_termid":{"GO:0006659":null}}


id: GO:0035939
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92632],"is_not":false,"summary":null,"term":"GO:0035939"}]},"cv_name":"molecular_function","definition":"Binding to a microsatellite, a repeat_region in DNA containing repeat units (2 to 4 base pairs) that is repeated multiple times in tandem.","definition_xrefs":["SO:0000289","GOC:yaf","PMID:21290414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"satellite DNA binding","termid":"GO:0003696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"microsatellite binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"VNTR binding","type":"exact"},{"name":"microsatellite DNA binding","type":"exact"},{"name":"variable number tandem repeat binding","type":"exact"}],"termid":"GO:0035939","terms_by_termid":{"GO:0035939":null}}


id: FYPO:0007180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex during mitosis. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex during mitosis","synonyms":[{"name":"mislocalised protein distributed in cell cortex during mitosis","type":"exact"},{"name":"mislocalized protein distributed at cell surface during mitosis","type":"related"},{"name":"mislocalized protein distributed in cell cortex during mitosis during vegetative growth","type":"exact"},{"name":"mislocalized protein distributed in cell cortex during mitotic M phase","type":"related"},{"name":"mislocalized protein distributed in cell cortex during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007180"}


id: GO:1901271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipooligosaccharide.","definition_xrefs":["GOC:yaf","UniPathway:UPA00501","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide biosynthetic process","synonyms":[{"name":"lipooligosaccharide anabolism","type":"exact"},{"name":"lipooligosaccharide biosynthesis","type":"exact"},{"name":"lipooligosaccharide formation","type":"exact"},{"name":"lipooligosaccharide synthesis","type":"exact"}],"termid":"GO:1901271"}


id: PBO:0084592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YGL046W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL045W","termid":"PBO:0084592"}


id: PBO:0061005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS like 1","termid":"PBO:0061005"}


id: PBO:0078676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 9-1","termid":"PBO:0078676"}


id: GO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an adenylyl group (adenosine 5'-monophosphate; AMP) from a protein amino acid.","definition_xrefs":["GOC:sp","PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein denucleotidylation","termid":"GO:0044601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deadenylylation","synonyms":[{"name":"protein deAMPylation","type":"exact"}],"termid":"GO:0044602"}


id: PBO:0025541
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae VAM7","termid":"PBO:0025541"}


id: PBO:0027610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-replication_origin_firing_during_mitotic_G2_phase","termid":"PBO:0027610"}


id: FYPO:0006635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell tip during mitotic interphase","synonyms":[{"name":"normal protein localisation to cell tip during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell end during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell tip during interphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006635"}


id: PBO:0113465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA and SAGA-like transcriptional regulatory complexes; interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters; role in preventing L-A mycovirus pathogenesis; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0113465"}


id: GO:0071244
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110013],"is_not":false,"summary":null,"term":"GO:0071244"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbon dioxide","termid":"GO:0010037"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbon dioxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071244","terms_by_termid":{"GO:0071244":null}}


id: PBO:0027632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere","termid":"PBO:0027632"}


id: PBO:0064780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1A pseudogene 1","termid":"PBO:0064780"}


id: PBO:0057864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3175","termid":"PBO:0057864"}


id: PBO:0065207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 39","termid":"PBO:0065207"}


id: GO:1901768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbapenem.","definition_xrefs":["GOC:yaf","PMID:9402024","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem catabolic process","synonyms":[{"name":"carbapenem breakdown","type":"exact"},{"name":"carbapenem catabolism","type":"exact"},{"name":"carbapenem degradation","type":"exact"}],"termid":"GO:1901768"}


id: FYPO:0005537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomerase holoenzyme complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal telomerase holoenzyme complex assembly","synonyms":[{"name":"normal telomerase holoenzyme complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomerase holoenzyme complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005537"}


id: GO:0044771
data:
  {"annotated_genes":["SJAG_01837","SJAG_02771","SJAG_04853","SJAG_04280","SJAG_00145","SJAG_01330","SJAG_00100","SJAG_04126","SJAG_04259","SJAG_04287","SJAG_01082","SJAG_04332","SJAG_01515","SJAG_03327","SJAG_00364","SJAG_03854","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102845,111009],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[95263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990946"},{"annotations":[112569,88008,103141],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[113180,102846,98349],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[95264,96693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[96694,98839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[108089,112518],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[95265],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[91113],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[110295],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[91728],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[97887],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[104884],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901993"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell commits to entering the next meiotic cell cycle phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00145":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03327":null,"SJAG_03854":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cycle transition","type":"broad"}],"termid":"GO:0044771","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0110031":null,"GO:0110032":null,"GO:1901993":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0040170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 1","termid":"PBO:0040170"}


id: PBO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-eMTOC_absent_from_cell","termid":"PBO:0035813"}


id: CHEBI:16284
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dATP","termid":"CHEBI:16284"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: PBO:0056044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listerin E3 ubiquitin protein ligase 1","termid":"PBO:0056044"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: PBO:0057824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3143","termid":"PBO:0057824"}


id: GO:0044053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptides or proteins produced by a symbiont organism to a location within the host cell cytoplasm.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of peptides or proteins into host","termid":"GO:0042000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of peptides or proteins into host cell cytoplasm","synonyms":[{"name":"translocation of symbiont peptides or proteins into host cell cytoplasm","type":"exact"},{"name":"transport of peptides or proteins into host cell cytoplasm","type":"exact"}],"termid":"GO:0044053"}


id: PBO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 1","termid":"PBO:0061847"}


id: PBO:0076250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 1","termid":"PBO:0076250"}


id: GO:0032934
data:
  {"annotated_genes":["SJAG_04018","SJAG_01722","SJAG_01590","SJAG_01329","SJAG_03718","SJAG_00355","SJAG_00054","SJAG_01407","SJAG_02323","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87009,98218,102859,106381],"is_not":false,"summary":null,"term":"GO:0032934"},{"annotations":[104735,112735,105893,107855,90823,99163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"}]},"cv_name":"molecular_function","definition":"Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"sterol binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005498"],"synonyms":[{"name":"sterol carrier activity","type":"related"}],"termid":"GO:0032934","terms_by_termid":{"GO:0008142":null,"GO:0032934":null}}


id: PBO:0057872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-1","termid":"PBO:0057872"}


id: PBO:0077057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 4","termid":"PBO:0077057"}


id: GO:0009499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monocluster bacterial-type ferredoxin (obsolete GO:0009499)","synonyms":[{"name":"monocluster bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009499"}


id: FYPO:0001882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of one or more enzymes that degrades cell wall polysaccharides than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to cell wall-degrading enzymes","synonyms":[{"name":"resistance to Lyticase","type":"narrow"},{"name":"resistance to Novozyme 234","type":"narrow"},{"name":"resistance to Zymolyase","type":"narrow"},{"name":"resistance to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"resistance to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"resistant to cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001882"}


id: PBO:0051698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-1-phosphatase","termid":"PBO:0051698"}


id: SO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_2prime_O_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_2_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:088"],"synonyms":[{"name":"N6 2 prime O dimethyladenosine","type":"exact"},{"name":"N6,2'-O-dimethyladenosine","type":"exact"},{"name":"m6Am","type":"exact"}],"termid":"SO:0001312"}


id: PBO:0087904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon; PDR8 has a paralog, YRR1, that arose from the whole genome duplication","termid":"PBO:0087904"}


id: PBO:0029186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_occurrence_of_activation_of_bipolar_cell_growth","termid":"PBO:0029186"}


id: GO:0060191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipase activity","termid":"GO:0060191"}


id: SO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_primary_transcript","synonyms":[{"name":"rRNA primary transcript","type":"exact"},{"name":"ribosomal RNA primary transcript","type":"exact"}],"termid":"SO:0000209"}


id: PBO:0068757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 2, pseudogene","termid":"PBO:0068757"}


id: GO:0036490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","PMID:14676213","GOC:PARL","PMID:16835242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of translation in response to ER stress","type":"exact"}],"termid":"GO:0036490"}


id: GO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex determination process that results in the initial specification of sexual status of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination","termid":"GO:0007538"}


id: PBO:0067061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 83, pseudogene","termid":"PBO:0067061"}


id: PBO:0058830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8060","termid":"PBO:0058830"}


id: PATO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteroventral to","termid":"PATO:0001918"}


id: PBO:0047800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I3","termid":"PBO:0047800"}


id: PBO:0088394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2","termid":"PBO:0088394"}


id: FYPO:0001878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but is elongated and has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable thin, elongated vegetative cell","synonyms":[{"name":"thin, elongated viable cell during vegetative growth","type":"exact"},{"name":"thin, elongated viable vegetative cell","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell width","type":"exact"},{"name":"viable thin, elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001878"}


id: GO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a torso (tor) protein, a receptor tyrosine kinase.","definition_xrefs":["PMID:2927509","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"torso binding","synonyms":[{"name":"tor binding","type":"exact"},{"name":"tor ligand","type":"narrow"},{"name":"torso ligand","type":"narrow"}],"termid":"GO:0005122"}


id: GO:1990549
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89477],"is_not":false,"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which NAD is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:16291748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD transmembrane transport","termid":"GO:0035352"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial NAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990549","terms_by_termid":{"GO:1990549":null}}


id: GO:0006057
data:
  {"annotated_genes":["SJAG_04770","SJAG_04906","SJAG_02519","SJAG_03082","SJAG_01021","SJAG_01276","SJAG_01264","SJAG_00598","SJAG_00816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84100,97317,101050,101476,101591,114875,105545,94454,102487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein anabolism","type":"exact"},{"name":"mannoprotein biosynthesis","type":"exact"},{"name":"mannoprotein formation","type":"exact"},{"name":"mannoprotein synthesis","type":"exact"}],"termid":"GO:0006057","terms_by_termid":{"GO:0000032":null}}


id: PR:Q9P801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L9-like mitochondrial ribosomal protein SPCC777.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.17c","synonyms":[{"name":"54S ribosomal protein L9, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"Spom972h-SPCC777.17c","type":"exact"}],"termid":"PR:Q9P801"}


id: GO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the inhibition of the sensory perception of pain in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:23034652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of sensory perception of pain in another organism","termid":"GO:0044742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of sensory perception of pain in another organism","synonyms":[{"name":"envenomation resulting in inhibition of sensory perception of pain in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044741"}


id: PBO:0017949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc7/UbcP3","termid":"PBO:0017949"}


id: PBO:0046872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule C","termid":"PBO:0046872"}


id: PATO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000975 absolute porosity (obsolete PATO:0000975)","termid":"PATO:0000975"}


id: GO:0090399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell aging process associated with the dismantling of a cell as a response to telomere shortening and/or cellular aging.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replicative senescence","termid":"GO:0090399"}


id: PBO:0044213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin Z","termid":"PBO:0044213"}


id: GO:1904316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["PMID:9321918","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"response to PAF","type":"exact"},{"name":"response to platelet-activating factor","type":"exact"}],"termid":"GO:1904316"}


id: FYPO:0004010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more ribosomal proteins is decreased.","definition_xrefs":["PMID:2839305","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased translation of ribosomal proteins during vegetative growth","synonyms":[{"name":"decreased translation of ribosomal proteins during mitotic cell cycle","type":"related"},{"name":"reduced translation of ribosomal proteins during vegetative growth","type":"exact"}],"termid":"FYPO:0004010"}


id: GO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-acetyl-2-L-amino-6-oxoheptanedioate + L-glutamate.","definition_xrefs":["PMID:1906065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetyldiaminopimelate aminotransferase activity","synonyms":[{"name":"N-acetyl-L,L-diaminopimelate aminotransferase activity","type":"exact"},{"name":"N-acetyl-diaminopimelate aminotransferase activity","type":"exact"}],"termid":"GO:0043760"}


id: PBO:0051970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza virus NS1A binding protein","termid":"PBO:0051970"}


id: GO:0061690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(6)-[(R)-lipoyl]-L-lysyl-[lipoyl-carrier protein] = (R)-lipoate + L-lysyl-[lipoyl-carrier protein].","definition_xrefs":["PMID:14086741","RHEA:76519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lipoamidase activity","secondary_identifiers":["MetaCyc:RXN-13031","EC:3.5.1.138"],"synonyms":[{"name":"lipoyl-X-hydrolase","type":"exact"}],"termid":"GO:0061690"}


id: PBO:0042620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDV3 pseudogene 1","termid":"PBO:0042620"}


id: PBO:0063519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal kinase","termid":"PBO:0063519"}


id: GO:0003066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream or released from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"},{"relation_name":"is_a","term_name":"positive regulation of heart rate","termid":"GO:0010460"},{"relation_name":"part_of","term_name":"positive regulation of heart rate by epinephrine-norepinephrine","termid":"GO:0001996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by norepinephrine","synonyms":[{"name":"noradrenaline cardiac chronotropy","type":"exact"},{"name":"noradrenaline regulation of the rate of heart muscle contraction","type":"exact"},{"name":"norepinephrine cardiac chronotropy","type":"exact"},{"name":"positive regulation of heart contraction rate by norepinephrine","type":"related"},{"name":"positive regulation of heart rate by adrenaline","type":"exact"}],"termid":"GO:0003066"}


id: PBO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S phase delayed","termid":"PBO:0012575"}


id: GO:0019244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate biosynthetic process from pyruvate","synonyms":[{"name":"lactate anabolism from pyruvate","type":"exact"},{"name":"lactate formation from pyruvate","type":"exact"},{"name":"lactate synthesis from pyruvate","type":"exact"},{"name":"pyruvate fermentation to lactate","type":"exact"}],"termid":"GO:0019244"}


id: PBO:0034152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-biomechanically_related_to","termid":"PBO:0034152"}


id: PBO:0063064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 3","termid":"PBO:0063064"}


id: FYPO:0006745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the thickness of the cell wall is abnormal. The wall may be uniformly thicker or thinner than normal, or thickness may be irregular.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall thickness during vegetative growth","synonyms":[{"name":"abnormal cell wall thickness during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006745"}


id: PBO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.31","termid":"PBO:0004810"}


id: FYPO:0003878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to monensin. Cells stop growing (and may die) at a concentration of monensin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to monensin","synonyms":[{"name":"hypersensitive to monensin","type":"exact"},{"name":"sensitive to monensin A","type":"narrow"},{"name":"sensitive to monensin during mitotic cell cycle","type":"related"},{"name":"sensitive to monensin during vegetative growth","type":"exact"}],"termid":"FYPO:0003878"}


id: GO:2000994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of mannan catabolic process","synonyms":[{"name":"regulation of mannan breakdown","type":"exact"},{"name":"regulation of mannan catabolism","type":"exact"},{"name":"regulation of mannan degradation","type":"exact"}],"termid":"GO:2000994"}


id: GO:0014895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hypertrophy","termid":"GO:0014895"}


id: GO:1901339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"}


id: PBO:0027739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip_during_cellular_response_to_salt_stress","termid":"PBO:0027739"}


id: CHEBI:75044
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phleomycin","termid":"CHEBI:75044"}


id: FYPO:0006843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin is increased.","definition_xrefs":["PMID:28904333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3 localization to chromatin","synonyms":[{"name":"increased histone H3 localisation to chromatin","type":"exact"},{"name":"increased histone H3 localization to chromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3 localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006843"}


id: PBO:0040262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 16 like 1","termid":"PBO:0040262"}


id: PBO:0083931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog","termid":"PBO:0083931"}


id: PBO:0058934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS18A antisense RNA 1","termid":"PBO:0058934"}


id: PR:Q09177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I and III subunit RPAC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13946:SF17","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I and III subunit RPAC2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.01","secondary_identifiers":["UniProtKB:Q09177"],"synonyms":[{"name":"AC19 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerases I and III 14 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I and III subunit AC2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1687.01","type":"related"},{"name":"Spom972h-POLR1D","type":"exact"},{"name":"rpa17","type":"related"}],"termid":"PR:Q09177"}


id: PBO:0043161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector a","termid":"PBO:0043161"}


id: PBO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1","termid":"PBO:0051088"}


id: GO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by retaining STAT2 in the cytoplasm, so STAT2 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039570)","synonyms":[{"name":"cytoplasmic sequestering of STAT2","type":"exact"},{"name":"cytoplasmic sequestration of STAT2","type":"exact"}],"termid":"GO:0039570"}


id: GO:0010794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"dolichol biosynthetic process","termid":"GO:0019408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of dolichol biosynthetic process","termid":"GO:0010794"}


id: PBO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 9","termid":"PBO:0050153"}


id: GO:0102916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (+)-piperitol + NADPH + O2 = (+)-sesamin + NADP + 2 H2O.","definition_xrefs":["GOC:pz","PMID:16785429"],"gene_count":0,"genotype_count":0,"name":"obsolete sesamin synthase activity (obsolete GO:0102916)","termid":"GO:0102916"}


id: PBO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1","termid":"PBO:0090736"}


id: GO:0032721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphotoxin A production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphotoxin A production","termid":"GO:0032681"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"lymphotoxin A production","termid":"GO:0032641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphotoxin A production","secondary_identifiers":["GO:0043018"],"synonyms":[{"name":"down regulation of lymphotoxin A production","type":"exact"},{"name":"down-regulation of lymphotoxin A production","type":"exact"},{"name":"downregulation of lymphotoxin A production","type":"exact"},{"name":"inhibition of lymphotoxin A production","type":"narrow"},{"name":"negative regulation of LTA production","type":"exact"},{"name":"negative regulation of TNF-beta production","type":"exact"},{"name":"negative regulation of lymphotoxin A biosynthetic process","type":"narrow"},{"name":"negative regulation of lymphotoxin-alpha production","type":"exact"},{"name":"negative regulation of tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032721"}


id: GO:1900112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 trimethylation (obsolete GO:1900112)","termid":"GO:1900112"}


id: PBO:0049948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A antisense RNA 1","termid":"PBO:0049948"}


id: MOD:01748
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01748"}


id: PBO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold pseudogene 1","termid":"PBO:0060964"}


id: GO:0044330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in positive regulation of wound healing.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of wound healing (obsolete GO:0044330)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of wound healing","type":"exact"}],"termid":"GO:0044330"}


id: FYPO:0006136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-butanediol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 2,3-butanediol level","synonyms":[{"name":"increased 2,3-butanediol accumulation","type":"related"},{"name":"increased cellular 2,3-butanediol level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2,3-butanediol level during vegetative growth","type":"exact"},{"name":"increased cellular butane-2,3-diol level","type":"exact"}],"termid":"FYPO:0006136"}


id: GO:0046277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"methylgallate metabolic process","termid":"GO:0019489"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methylgallate biosynthetic process","synonyms":[{"name":"methylgallate anabolism","type":"exact"},{"name":"methylgallate biosynthesis","type":"exact"},{"name":"methylgallate formation","type":"exact"},{"name":"methylgallate synthesis","type":"exact"}],"termid":"GO:0046277"}


id: PR:O94438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps102 gene.","definition_xrefs":["UniProtKB:O94438","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.04c","synonyms":[{"name":"S3aE-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps102","type":"exact"}],"termid":"PR:O94438"}


id: GO:0038055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a member of the BMP family of proteins from a cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"BMP secretion","synonyms":[{"name":"BMP protein secretion","type":"exact"},{"name":"bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:0038055"}


id: PBO:0041592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A pseudogene 1","termid":"PBO:0041592"}


id: PBO:0028185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0028185"}


id: PBO:0048043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin","termid":"PBO:0048043"}


id: GO:0035017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterns of cell differentiation in the cuticle.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pattern formation","termid":"GO:0035017"}


id: GO:0006749
data:
  {"annotated_genes":["SJAG_00903","SJAG_01351","SJAG_04726","SJAG_01995","SJAG_01612","SJAG_02599","SJAG_04858","SJAG_05181","SJAG_03494","SJAG_03316","SJAG_01162","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84569,95840,99341,101752],"is_not":false,"summary":null,"term":"GO:0006749"},{"annotations":[89879,93587,114678,104959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[95770,94944,98810,105244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02599":null,"SJAG_03316":null,"SJAG_03494":null,"SJAG_04726":null,"SJAG_04858":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione metabolism","type":"exact"},{"name":"oxidized glutathione reduction","type":"narrow"}],"termid":"GO:0006749","terms_by_termid":{"GO:0006749":null,"GO:0006750":null,"GO:0006751":null}}


id: GO:1903091
data:
  {"annotated_genes":["SJAG_03652","SJAG_02152","SJAG_02962","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86727,86728,113975,115250],"is_not":false,"summary":null,"term":"GO:1903091"}]},"cv_name":"biological_process","definition":"The process in which pyridoxamine is transported across a membrane.","definition_xrefs":["PMID:15701794","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxamine transport","termid":"GO:0031922"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyridoxamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903091","terms_by_termid":{"GO:1903091":null}}


id: PBO:0050555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicobacter pylori responsive 1","termid":"PBO:0050555"}


id: GO:0044030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA methylation (obsolete GO:0044030)","termid":"GO:0044030"}


id: PBO:0071457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 63","termid":"PBO:0071457"}


id: GO:1901784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cresol.","definition_xrefs":["GOC:TermGenie","PMID:10623531","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol metabolic process","synonyms":[{"name":"p-cresol metabolism","type":"exact"}],"termid":"GO:1901784"}


id: GO:0060284
data:
  {"annotated_genes":["SJAG_00993","SJAG_02392","SJAG_02169","SJAG_04140","SJAG_03581","SJAG_00514","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91148,92416,86450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[107724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[98840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[87315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060284","terms_by_termid":{"GO:0034307":null,"GO:0051517":null,"GO:0051519":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0008589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway","secondary_identifiers":["GO:0043109","GO:0007226"],"synonyms":[{"name":"regulation of hedgehog signaling pathway","type":"exact"},{"name":"regulation of hh signaling pathway","type":"exact"},{"name":"regulation of smoothened activity","type":"related"},{"name":"regulation of smoothened by patched","type":"related"},{"name":"regulation of smoothened receptor activity by patched","type":"related"},{"name":"regulation of smoothened signalling pathway","type":"exact"}],"termid":"GO:0008589"}


id: GO:0010722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferrochelatase activity; catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferrochelatase activity","termid":"GO:0010722"}


id: GO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trochlear nerve is generated and organized. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve morphogenesis","synonyms":[{"name":"CH IV morphogenesis","type":"related"}],"termid":"GO:0021639"}


id: GO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of one or more phosphate groups to an actin molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin phosphorylation (obsolete GO:0031289)","termid":"GO:0031289"}


id: PR:P0CT54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef102 gene.","definition_xrefs":["UniProtKB:P0CT54","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.10","synonyms":[{"name":"EF-1-alpha-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef102","type":"exact"}],"termid":"PR:P0CT54"}


id: FYPO:0000145
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[116032,115738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01330":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":3,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"regulation phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:28954740":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_01330"],"single_locus_genotype_uniquenames":["nup61delta","mad2delta"],"synonyms":[{"name":"fission yeast regulation phenotype","type":"exact"}],"termid":"FYPO:0000145","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000619":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null}}


id: GO:0160196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-polyprenol + NAD(P) = ditrans,polycis-polyprenal+ NAD(P)H + H+.","definition_xrefs":["PMID:38821050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyprenol dehydrogenase activity","termid":"GO:0160196"}


id: GO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)acetaldehyde + H2O + NAD+ = 4-hydroxyphenylacetate + 2 H+ + NADH.","definition_xrefs":["RHEA:17273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.2.1.53","MetaCyc:1.2.1.53-RXN"],"synonyms":[{"name":"4-HPAL dehydrogenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047106"}


id: PR:O42958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 2-associated protein pat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.10c","synonyms":[{"name":"Spom972h-pdc2","type":"exact"},{"name":"decapping activator and translational repressor pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"topoisomerase II-associated protein pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42958"}


id: SO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the T7 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T7_RNA_Polymerase_Promoter","synonyms":[{"name":"T7 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001207"}


id: GO:0035133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic caudal fin morphogenesis","termid":"GO:0035133"}


id: GO:0102692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N-benzyladenine = H+ + N-benzyl-9-(alpha-D-glucosyl)adenine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete benzyladenine UDP glycosyltransferase activity (obsolete GO:0102692)","termid":"GO:0102692"}


id: PBO:0027159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_interphase_microtubule_nucleation","termid":"PBO:0027159"}


id: PBO:0049217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 1","termid":"PBO:0049217"}


id: PBO:0046004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1B","termid":"PBO:0046004"}


id: PBO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhytoCheletin Synthase","termid":"PBO:0011092"}


id: GO:1905802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["PMID:23721876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to manganese ion","synonyms":[{"name":"regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905802"}


id: PBO:0111892
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain","termid":"PBO:0111892"}


id: PBO:0069918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1210, pseudogene","termid":"PBO:0069918"}


id: GO:2000115
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of bipolar cell polarity regulating in cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000115","terms_by_termid":{"GO:0061361":null}}


id: PBO:0004775
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBP Cleavage activating Protein","termid":"PBO:0004775"}


id: GO:0097586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt4p.","definition_xrefs":["GOC:jd","PMID:12551906","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005789","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p homodimer complex","synonyms":[{"name":"Pmt4p-Pmt4p complex","type":"narrow"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p dimer","type":"exact"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p-Pmt4p dimer complex","type":"exact"}],"termid":"GO:0097586"}


id: GO:1902586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An intercellular transport which involves another organism.","definition_xrefs":["GOC:TermGenie","GO_REF:0000089","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism intercellular transport (obsolete GO:1902586)","synonyms":[{"name":"multi organism intercellular transport","type":"exact"}],"termid":"GO:1902586"}


id: PBO:0071465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 6","termid":"PBO:0071465"}


id: GO:0000165
data:
  {"annotated_genes":["SJAG_00424","SJAG_00318","SJAG_02013","SJAG_03453","SJAG_04503","SJAG_03340","SJAG_04551","SJAG_00027","SJAG_02342","SJAG_01978","SJAG_01345","SJAG_03828","SJAG_01885","SJAG_02592","SJAG_00117","SJAG_00990","SJAG_04522","SJAG_03753","SJAG_05000","SJAG_00975","SJAG_01114","SJAG_03185","SJAG_01787","SJAG_02135","SJAG_00993","SJAG_02000","SJAG_03625","SJAG_06622","SJAG_03893","SJAG_02945","SJAG_03903","SJAG_04825","SJAG_02233","SJAG_01199","SJAG_03384","SJAG_02392","SJAG_06621","SJAG_06592","SJAG_00781","SJAG_01718","SJAG_01181","SJAG_02923","SJAG_03263","SJAG_04666","SJAG_00610","SJAG_01587","SJAG_02183","SJAG_04777","SJAG_00845","SJAG_02486","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57299,62241,96528],"is_not":false,"summary":null,"term":"GO:0000165"},{"annotations":[88839,107501,98693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[64960,102802,62673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007254"},{"annotations":[100348,103576,104142,114815,96007,92420],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[103668,84797],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0043409"},{"annotations":[96009,114816,91605,92540,88236,113587],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[103669],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0180040"},{"annotations":[102803,106868,97454,84139,98308,90943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038066"},{"annotations":[102804,88762,85819,92946,89894,93617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071507"},{"annotations":[87354,88993,99391,86023],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903139"},{"annotations":[113877,105467,105466,105471,105470,105465,105469,105468,108348,108998,114782,91827],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900745"},{"annotations":[112097,100249,84733,87431,111136],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0062038"},{"annotations":[79701,88931],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043408"},{"annotations":[91606],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1900744"}]},"cv_name":"biological_process","definition":"An intracellular protein kinase cascade containing at least a MAP kinase (MAPK). It starts with the activation of a MAP3K, and the consecutive activation of a MPK2K and a MAPK. The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinase in the downstream tier to transmit a signal within a cell.","definition_xrefs":["PMID:20811974","PMID:9561267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00117":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01114":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01345":null,"SJAG_01587":null,"SJAG_01718":null,"SJAG_01787":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02233":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02878":null,"SJAG_02923":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03340":null,"SJAG_03384":null,"SJAG_03453":null,"SJAG_03625":null,"SJAG_03753":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04503":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04777":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Mitogen-activated_protein_kinase","GO:0007255","Wikipedia:MAPK_cascade"],"synonyms":[{"name":"ERK/MAPK cascade","type":"narrow"},{"name":"MAP kinase cascade","type":"exact"},{"name":"MAP kinase kinase kinase cascade","type":"exact"},{"name":"MAPK signal transduction","type":"exact"},{"name":"MAPK signaling","type":"related"},{"name":"MAPK signalling","type":"related"},{"name":"MAPKKK cascade","type":"exact"},{"name":"MAPKKK cascade during sporulation","type":"narrow"},{"name":"mitogen-activated protein kinase cascade","type":"exact"}],"termid":"GO:0000165","terms_by_termid":{"GO:0000165":null,"GO:0000196":null,"GO:0007254":null,"GO:0038066":null,"GO:0043408":null,"GO:0043409":null,"GO:0062038":null,"GO:0071507":null,"GO:0180040":null,"GO:1900744":null,"GO:1900745":null,"GO:1903138":null,"GO:1903139":null,"GO:1903753":null}}


id: PBO:0079101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed basic protein 1","termid":"PBO:0079101"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: GO:0097497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of negative regulation of cell adhesion that results in blood vessel endothelial cells splitting off from an existing endothelial sheet.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination","termid":"GO:0097497"}


id: PBO:0080679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome candidate 1-like 2, pseudogene","termid":"PBO:0080679"}


id: GO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Addition of an amide group from a glycine to a protein amino acid.","definition_xrefs":["UniProtKB-KW:KW-0027"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amidation (obsolete GO:0018032)","synonyms":[{"name":"protein amino acid amidation","type":"exact"}],"termid":"GO:0018032"}


id: PBO:0042820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 1","termid":"PBO:0042820"}


id: GO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ha","PMID:27689881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of entry into reproductive diapause","termid":"GO:0061963"},{"relation_name":"negatively_regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of entry into reproductive diapause","termid":"GO:0061964"}


id: PBO:0066911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 212","termid":"PBO:0066911"}


id: GO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + glyoxylate = 4-(2-aminophenyl)-2,4-dioxobutanoate + glycine.","definition_xrefs":["EC:2.6.1.63","RHEA:19249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"kynurenine-glyoxylate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01957","MetaCyc:2.6.1.63-RXN"],"synonyms":[{"name":"L-kynurenine:glyoxylate aminotransferase (cyclizing)","type":"related"},{"name":"kynurenine--glyoxylate aminotransferase activity","type":"related"},{"name":"kynurenine-glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0047315"}


id: PBO:0059407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 4","termid":"PBO:0059407"}


id: PBO:0029483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_curved_cells_(obsolete_FYPO:0002232)","termid":"PBO:0029483"}


id: GO:2000804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000804"}


id: PATO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-lethal (sensu genetics)","termid":"PATO:0001768"}


id: PBO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR signaling pathway transcriptional corepressor Crf1 (predicted)","termid":"PBO:0001528"}


id: PBO:0086624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YCR090C is not an essential gene","termid":"PBO:0086624"}


id: PBO:0024816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of","termid":"PBO:0024816"}


id: GO:1900751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a 4-(trimethylammonio)butanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:16365044","PMID:20829798","PMID:20357772","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transport","synonyms":[{"name":"4-(N-trimethylamino)butyrate transport","type":"exact"},{"name":"4-butyrobetaine transport","type":"exact"},{"name":"Actinine transport","type":"related"},{"name":"C7H15NO2 transport","type":"related"},{"name":"butyrobetaine transport","type":"related"},{"name":"deoxycarnitine transport","type":"related"},{"name":"gamma-Butyrobetain transport","type":"exact"},{"name":"gamma-butyrobetaine transport","type":"exact"}],"termid":"GO:1900751"}


id: PBO:0051599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 subunit alpha","termid":"PBO:0051599"}


id: GO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-asparagine amide by hydrolysis and oxidation of an interior Asn-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0083"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-asparagine amidation (obsolete GO:0018036)","termid":"GO:0018036"}


id: PBO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome-dependent catabolite inactivation protein, ubiquitin ligase complex subunit (predicted)","termid":"PBO:0002597"}


id: PBO:0039460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 11","termid":"PBO:0039460"}


id: PBO:0077651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 3","termid":"PBO:0077651"}


id: GO:1905613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","PMID:11606552","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental vegetative growth","termid":"GO:1905613"}


id: GO:1901162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound biosynthetic process","synonyms":[{"name":"primary amino compound anabolism","type":"exact"},{"name":"primary amino compound biosynthesis","type":"exact"},{"name":"primary amino compound formation","type":"exact"},{"name":"primary amino compound synthesis","type":"exact"}],"termid":"GO:1901162"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: PBO:0048556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 1","termid":"PBO:0048556"}


id: PBO:0077305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 44","termid":"PBO:0077305"}


id: GO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleus","secondary_identifiers":["GO:0033649"],"termid":"GO:0042025"}


id: PBO:0078257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable A (pseudogene)","termid":"PBO:0078257"}


id: PBO:0054087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1440","termid":"PBO:0054087"}


id: GO:0006439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Hydrolysis of the peptidyl-tRNA by aminoacyl-tRNA hydrolase upon termination of translation. Analogous to usual peptidyl transfer during elongation, except that the acceptor is H2O instead of an aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacyl-tRNA hydrolase reaction (obsolete GO:0006439)","synonyms":[{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"}],"termid":"GO:0006439"}


id: PBO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP)","termid":"PBO:0002510"}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: GO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of muscle tissue development","termid":"GO:1901863"},{"relation_name":"positively_regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle tissue development","synonyms":[{"name":"activation of striated muscle development","type":"narrow"},{"name":"stimulation of striated muscle development","type":"narrow"},{"name":"up regulation of striated muscle development","type":"exact"},{"name":"up-regulation of striated muscle development","type":"exact"},{"name":"upregulation of striated muscle development","type":"exact"}],"termid":"GO:0045844"}


id: PBO:0086520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps dubious ORF YFL015W-A; YFL015C is not an essential gene","termid":"PBO:0086520"}


id: GO:0009080
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"pyruvate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate family amino acid breakdown","type":"exact"},{"name":"pyruvate family amino acid catabolism","type":"exact"},{"name":"pyruvate family amino acid degradation","type":"exact"}],"termid":"GO:0009080","terms_by_termid":{"GO:0042853":null}}


id: PBO:0077509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 229A","termid":"PBO:0077509"}


id: GO:1900488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [2Fe-2S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [2Fe-2S] cluster assembly","termid":"GO:1900487"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[2Fe-2S] cluster assembly","termid":"GO:0044571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"negative regulation of [2Fe-2S] cluster assembly","synonyms":[{"name":"down regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"down regulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"down regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"down-regulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"down-regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"downregulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"downregulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 2Fe-2S cluster assembly","type":"narrow"},{"name":"inhibition of [2Fe-2S] cluster assembly","type":"narrow"},{"name":"inhibition of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"negative regulation of [2Fe-2S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900488"}


id: GO:1902925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from fatty acid.","definition_xrefs":["GOC:TermGenie","PMID:21129764","GOC:mengo_curators","GO_REF:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process from fatty acid","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) formation from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis from fatty acid","type":"exact"}],"termid":"GO:1902925"}


id: PBO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tyrosine_level","termid":"PBO:0030564"}


id: PR:P79010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.02","synonyms":[{"name":"Spom972h-cox4","type":"exact"},{"name":"cytochrome c oxidase polypeptide IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79010"}


id: PBO:0063136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin alpha","termid":"PBO:0063136"}


id: PBO:0031118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_processing","termid":"PBO:0031118"}


id: PBO:0077103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 1","termid":"PBO:0077103"}


id: GO:0010499
data:
  {"annotated_genes":["SJAG_00591","SJAG_02625","SJAG_00837","SJAG_05252"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70126,74639,76330,78147],"is_not":false,"summary":null,"term":"GO:0010499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteasomal ubiquitin-independent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010499","terms_by_termid":{"GO:0010499":null}}


id: PBO:0049206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 1","termid":"PBO:0049206"}


id: GO:1904035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell apoptotic process.","definition_xrefs":["PMID:19137015","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell apoptotic process","synonyms":[{"name":"regulation of epithelial cell apoptosis","type":"narrow"},{"name":"regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"regulation of epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904035"}


id: PBO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted), possible alternative UTR","termid":"PBO:0000209"}


id: FYPO:0004938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the first meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis","termid":"FYPO:0003550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during meiosis I","synonyms":[{"name":"decreased protein accumulation during meiosis I","type":"related"},{"name":"decreased protein level during first meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis I","type":"exact"}],"termid":"FYPO:0004938"}


id: PBO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion Bleomycin Sensitive","termid":"PBO:0031874"}


id: PBO:0085372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pH sensor molecule, component of the RIM101 pathway; has a role in cell wall construction and alkaline pH response; is glycosylated and phosphorylated; interacts with Dfg16p and Rim9p to form a pH-sensing complex; localization to the plasma membrane is dependent on Dfg16p and Rim9p; has similarity to A. nidulans PalH","termid":"PBO:0085372"}


id: PBO:0016930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein (predicted)","termid":"PBO:0016930"}


id: GO:0061360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the progression of the optic chiasm from its initial formation to the mature structure. The process begins when the pathfinding of the axons of the developing optic nerve cause some axons to cross at the midline of the brain and ends when the axons are mature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic chiasma development","synonyms":[{"name":"optic chiasm development","type":"exact"}],"termid":"GO:0061360"}


id: PBO:0091610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-V, S-(hydroxymethyl)glutathione synthase","termid":"PBO:0091610"}


id: GO:0103069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced [NADPH--hemoprotein reductase] = 11-deoxycortisol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:pz","RHEA:50308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"17-hydroxyprogesterone 21-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN66-356"],"termid":"GO:0103069"}


id: PBO:0089126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Aar2","termid":"PBO:0089126"}


id: GO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of D-glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"regulates","term_name":"D-glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of D-glucose import","synonyms":[{"name":"regulation of glucose import","type":"exact"},{"name":"regulation of glucose uptake","type":"exact"}],"termid":"GO:0046324"}


id: PBO:0048791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2 pseudogene 2","termid":"PBO:0048791"}


id: GO:0065008
data:
  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lse,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[98302,86414,99291,101694,87264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[115632,115633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[91115,95005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[106015,92035,110482,106682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[115286,109564,91154,87717,96734,101886,101075,92234],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[89001,99394,84491],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"},{"annotations":[95006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061387"},{"annotations":[84292,110281,84293,95393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[86099,93311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042391"},{"annotations":[84995,113792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043488"},{"annotations":[88102,86387,86782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"},{"annotations":[97752,98030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097036"},{"annotations":[115119,101622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006450"},{"annotations":[94292,110833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"},{"annotations":[87224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"},{"annotations":[84628,98536,85903,95485,100454,86432,98190,96571,115228,86748,92225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any 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id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: PBO:0089025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated PX/BAR domain sorting nexin Atg24","termid":"PBO:0089025"}


id: PBO:0029159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_phlorizin_during_spore_germination","termid":"PBO:0029159"}


id: PBO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 like 1","termid":"PBO:0060670"}


id: SO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region in mRNA where ribosome assembles.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"five_prime_UTR","termid":"SO:0000204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome_entry_site","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:ribosome_binding_site","type":"exact"},{"name":"ribosome entry site","type":"exact"}],"termid":"SO:0000139"}


id: GO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutaryl-CoA + 2 H+ + oxidized [electron-transfer flavoprotein] = (2E)-butenoyl-CoA + CO2 + reduced [electron-transfer flavoprotein].","definition_xrefs":["RHEA:13389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:GLUTARYL-COA-DEHYDROGENASE-RXN","Reactome:R-HSA-71046","UM-BBD_reactionID:r0198","EC:1.3.8.6"],"synonyms":[{"name":"glutaryl coenzyme A dehydrogenase activity","type":"related"}],"termid":"GO:0004361"}


id: PBO:0083969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoamylase (glucan 1,4-alpha-glucosidase); extracellular enzyme needed for utilization of starch and oligosaccharides","termid":"PBO:0083969"}


id: MOD:00680
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxygenated residue","termid":"MOD:00676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated residue","synonyms":[{"name":"SOxyRes","type":"exact"}],"termid":"MOD:00680"}


id: GO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the shaping of the ureter. The ureter is a tube that extends from the kidney to the bladder.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in ureter morphogenesis (obsolete GO:0061149)","synonyms":[{"name":"BMP signalling pathway involved in ureter morphogenesis","type":"exact"}],"termid":"GO:0061149"}


id: GO:0009226
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  {"annotated_genes":["SJAG_02783","SJAG_02950","SJAG_00519","SJAG_02951","SJAG_04728","SJAG_03188","SJAG_03818","SJAG_01784","SJAG_02648","SJAG_00978","SJAG_03723","SJAG_00890","SJAG_01443","SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99630,104914,112593,85788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[110229,110222,106121,110230,110240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[85122,57737,84784,99240,99334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar anabolism","type":"exact"},{"name":"nucleotide-sugar biosynthesis","type":"exact"},{"name":"nucleotide-sugar formation","type":"exact"},{"name":"nucleotide-sugar synthesis","type":"exact"}],"termid":"GO:0009226","terms_by_termid":{"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination","termid":"PBO:0034558"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: RO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x surrounded_by y if and only if (1) x is adjacent to y and for every region r that is adjacent to x, r overlaps y (2) the shared boundary between x and y occupies the majority of the outermost boundary of x","direct_ancestors":[{"relation_name":"is_a","term_name":"adjacent_to","termid":"RO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surrounded_by","termid":"RO:0002219"}


id: GO:0140267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, triggered by an interaction between the bilayer of a host membrane and a membrane-penetration symbiont protein. This process mediates the entry of some non-enveloped virus into host cells, and results in the release of the virus contents into the host cell cytoplasm.","definition_xrefs":["PMID:20427561","PMID:25055856","VZ:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of host membrane","synonyms":[{"name":"viral entry via permeabilization of host membrane","type":"narrow"}],"termid":"GO:0140267"}


id: PBO:0065491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome inhibitor subunit 1","termid":"PBO:0065491"}


id: PBO:0004581
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe GlycoProtease","termid":"PBO:0004581"}


id: GO:2000724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"positively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"positive regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000724"}


id: PBO:0084095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Rho1p; mutations are synthetically lethal with mutations in rom2, which also encodes a GEP; ROM1 has a paralog, ROM2, that arose from the whole genome duplication","termid":"PBO:0084095"}


id: GO:0106055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalysing the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["PMID:21700223","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase complex","termid":"GO:0106055"}


id: GO:0106081
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92340],"is_not":false,"summary":null,"term":"GO:0106081"}]},"cv_name":"biological_process","definition":"The directed movement of maltose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"},{"relation_name":"is_a","term_name":"maltose transmembrane transport","termid":"GO:1904981"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"maltose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106081","terms_by_termid":{"GO:0106081":null}}


id: PBO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_inner_repeat","termid":"PBO:0030964"}


id: GO:0140462
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87924],"is_not":false,"summary":null,"term":"GO:0140462"}]},"cv_name":"biological_process","definition":"The organization of chromatin into heterochromatin at the pericentric region of a chromosome.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pericentric heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140462","terms_by_termid":{"GO:0140462":null}}


id: GO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.1","TC:3.A.2.1.3"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating F-type ATPase activity (obsolete GO:0016467)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"F1-ATPase activity","type":"exact"},{"name":"hydrogen-translocating F-type ATPase activity","type":"exact"},{"name":"proton-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016467"}


id: PBO:0044010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1","termid":"PBO:0044010"}


id: PBO:0047831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P2","termid":"PBO:0047831"}


id: GO:0072759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a topoisomerase inhibitor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to topoisomerase inhibitor","termid":"GO:0072758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to topoisomerase inhibitor","termid":"GO:0072759"}


id: PBO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U5 subunit 200","termid":"PBO:0075135"}


id: PBO:0089107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit","termid":"PBO:0089107"}


id: GO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction organization","synonyms":[{"name":"adherens junction organisation","type":"exact"}],"termid":"GO:0034332"}


id: GO:0019548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"arginine catabolic process to spermine","secondary_identifiers":["MetaCyc:ARGSPECAT-PWY"],"synonyms":[{"name":"arginine breakdown to spermine","type":"exact"},{"name":"arginine degradation to spermine","type":"exact"}],"termid":"GO:0019548"}


id: GO:0016426
data:
  {"annotated_genes":["SJAG_02637","SJAG_02386"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108671,97524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methyladenine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tRNA (adenine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA (adenine-C2-)-methyltransferase activity","type":"broad"}],"termid":"GO:0016426","terms_by_termid":{"GO:0160107":null}}


id: PBO:0076671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2 pseudogene 1","termid":"PBO:0076671"}


id: GO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate.","definition_xrefs":["PMID:17259313","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"D-lysine transaminase activity","synonyms":[{"name":"D-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043911"}


id: GO:0021550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata development","synonyms":[{"name":"medulla development","type":"related"},{"name":"myelencephalon development","type":"related"}],"termid":"GO:0021550"}


id: GO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylinositol 3-kinase/protein kinase B signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0043491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","synonyms":[{"name":"regulation of AKT signaling cascade","type":"related"},{"name":"regulation of AKT signalling cascade","type":"related"},{"name":"regulation of PI3K-PKB/Akt pathway","type":"exact"},{"name":"regulation of PI3K/Akt signal transduction","type":"exact"},{"name":"regulation of PI3K/PKB signal transduction","type":"exact"},{"name":"regulation of PKB signaling cascade","type":"related"},{"name":"regulation of PKB signalling cascade","type":"related"},{"name":"regulation of phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"regulation of protein kinase B signaling","type":"related"},{"name":"regulation of protein kinase B signaling cascade","type":"related"},{"name":"regulation of protein kinase B signalling cascade","type":"related"}],"termid":"GO:0051896"}


id: GO:0035437
data:
  {"annotated_genes":["SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in the endoplasmic reticulum and prevented from moving elsewhere. These include sequestration within the endoplasmic reticulum, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the endoplasmic reticulum.","definition_xrefs":["GOC:bf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein localization in endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"maintenance of protein localization in ER","type":"exact"},{"name":"maintenance of protein location in ER","type":"exact"},{"name":"maintenance of protein location in endoplasmic reticulum","type":"exact"},{"name":"protein-ER retention","type":"exact"},{"name":"protein-endoplasmic reticulum retention","type":"exact"},{"name":"retention of protein in ER","type":"exact"},{"name":"retention of protein in endoplasmic reticulum","type":"exact"}],"termid":"GO:0035437","terms_by_termid":{"GO:0006621":null}}


id: GO:0033782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (24S)-hydroxycholesterol + O2 + reduced [NADPH-hemoprotein reductase] = (24S)-7alpha-dihydroxycholesterol + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:10748047","RHEA:46124","PMID:11013305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxysterol 7-alpha-hydroxylase activity","termid":"GO:0008396"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"24-hydroxycholesterol 7alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07208","MetaCyc:1.14.13.99-RXN","EC:1.14.14.26"],"synonyms":[{"name":"24-cholest-5-ene-3beta,24-diol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating) activity","type":"related"},{"name":"24-hydroxycholesterol 7alpha-monooxygenase activity","type":"related"}],"termid":"GO:0033782"}


id: PATO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the side of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally rotated","synonyms":[{"name":"externally rotated","type":"exact"}],"termid":"PATO:0002156"}


id: GO:0038200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ethylene and transmitting the signal within the cell to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:signaling","PMID:22467798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene receptor activity","termid":"GO:0038199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ethylene receptor histidine kinase activity","termid":"GO:0038200"}


id: GO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to MAP kinase and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP-kinase anchoring activity (obsolete GO:0005077)","synonyms":[{"name":"MAP-kinase anchor protein activity","type":"exact"},{"name":"MAP-kinase anchoring activity","type":"exact"}],"termid":"GO:0005077"}


id: PBO:0043639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 2","termid":"PBO:0043639"}


id: FYPO:0005703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A  microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"decreased microtubule plus end growth rate","type":"exact"},{"name":"decreased microtubule polymerization rate","type":"exact"},{"name":"decreased rate of microtubule growth","type":"exact"},{"name":"decreased rate of microtubule polymerisation","type":"exact"},{"name":"decreased rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"reduced rate of microtubule polymerization","type":"exact"}],"termid":"FYPO:0005703"}


id: PBO:0088381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase (glutamine hydrolysing)","termid":"PBO:0088381"}


id: GO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription, start site selection","termid":"GO:0010630"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"regulates","term_name":"transcriptional start site selection at RNA polymerase II promoter","termid":"GO:0001174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transcriptional start site selection at RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription start site selection at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001178"}


id: GO:0110042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nematode pharynx morphogenesis.","definition_xrefs":["PMID:20805556","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharynx morphogenesis","termid":"GO:0110041"},{"relation_name":"is_a","term_name":"negative regulation of animal organ morphogenesis","termid":"GO:0110111"},{"relation_name":"negatively_regulates","term_name":"nematode pharynx morphogenesis","termid":"GO:0110040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode pharynx morphogenesis","termid":"GO:0110042"}


id: GO:1900121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor binding","synonyms":[{"name":"down regulation of receptor binding","type":"exact"},{"name":"down regulation of receptor-associated protein activity","type":"related"},{"name":"down-regulation of receptor binding","type":"exact"},{"name":"downregulation of receptor binding","type":"exact"},{"name":"inhibition of receptor binding","type":"narrow"},{"name":"inhibition of receptor ligand","type":"narrow"}],"termid":"GO:1900121"}


id: FYPO:0008079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a inositol heptakisphosphate 5-kinase are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008079"}


id: PBO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2)","termid":"PBO:0047915"}


id: PBO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.29","termid":"PBO:0005400"}


id: PBO:0090813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2","termid":"PBO:0090813"}


id: GO:0071502
data:
  {"annotated_genes":["SJAG_02381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87395],"is_not":false,"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to thermal stimulus","type":"exact"}],"termid":"GO:0071502","terms_by_termid":{"GO:0071502":null}}


id: FYPO:0002392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein acetylation during vegetative growth","synonyms":[{"name":"abnormal protein acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002392"}


id: PBO:0062175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily L member 1","termid":"PBO:0062175"}


id: PBO:0029789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Dsc_complex_assembly","termid":"PBO:0029789"}


id: GO:0019178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ = NAD+ + phosphate.","definition_xrefs":["RHEA:28050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NADP phosphatase activity","secondary_identifiers":["MetaCyc:RXN-5822"],"termid":"GO:0019178"}


id: PBO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitochondrion_inheritance","termid":"PBO:0030938"}


id: PBO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup60","termid":"PBO:0005656"}


id: FYPO:0004577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004577"}


id: PBO:0040613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 2","termid":"PBO:0040613"}


id: PR:O94542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1322.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.02","synonyms":[{"name":"Spom972h-pxd1","type":"exact"}],"termid":"PR:O94542"}


id: PBO:0027378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_during_mitotic_telophase","termid":"PBO:0027378"}


id: GO:0097084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell development","synonyms":[{"name":"vascular smooth muscle cell development","type":"exact"}],"termid":"GO:0097084"}


id: PBO:0025553
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA modification, acetylated cytidines","termid":"PBO:0025553"}


id: PBO:0068218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 525","termid":"PBO:0068218"}


id: GO:0031280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclase activity","synonyms":[{"name":"down regulation of cyclase activity","type":"exact"},{"name":"down-regulation of cyclase activity","type":"exact"},{"name":"downregulation of cyclase activity","type":"exact"},{"name":"inhibition of cyclase activity","type":"narrow"}],"termid":"GO:0031280"}


id: GO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication","type":"exact"}],"termid":"GO:0086067"}


id: PBO:0045539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 1","termid":"PBO:0045539"}


id: PBO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 27 pseudogene","termid":"PBO:0070113"}


id: SO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Copia superfamily contain elements coding for specific proteins in this order: GAG, AP, INT, RT, RH. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copia_LTR_retrotransposon","synonyms":[{"name":"Copia LTR retrotransposon","type":"exact"},{"name":"RLC retrotransposon","type":"exact"},{"name":"Ty1 retrotransposon","type":"exact"}],"termid":"SO:0002264"}


id: PBO:0076316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNM antisense RNA 2","termid":"PBO:0076316"}


id: PBO:0046644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 25","termid":"PBO:0046644"}


id: PR:Q9UTB4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mss51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mss51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.04c","synonyms":[{"name":"Spom972h-mss51","type":"exact"}],"termid":"PR:Q9UTB4"}


id: PBO:0049460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYG2 antisense RNA 1","termid":"PBO:0049460"}


id: PBO:0028584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_stationary_phase","termid":"PBO:0028584"}


id: GO:0032093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SAM (Sterile Alpha Motif) domain, which is a 70-amino acid protein sequence that participates in protein-protein, protein-lipid, and protein-RNA interactions and is conserved from lower to higher eukaryotes.","definition_xrefs":["GOC:mcc","PMID:16337230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SAM domain binding","synonyms":[{"name":"Sterile Alpha Motif domain binding","type":"exact"}],"termid":"GO:0032093"}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:18337471","PMID:21498478","PMID:21422230","GOC:cilia","PMID:21555462","PMID:25150219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: FYPO:0002387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at subtelomeres is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to telomere","termid":"FYPO:0003803"},{"relation_name":"is_a","term_name":"decreased protein localization to subtelomeric heterochromatin","termid":"FYPO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to telomeric heterochromatin during vegetative growth","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002387"}


id: PBO:0073590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHMT1 pseudogene 1","termid":"PBO:0073590"}


id: GO:0061838
data:
  {"annotated_genes":["SJAG_00935","SJAG_02465","SJAG_05321","SJAG_02513"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87361,104672,108697,113946],"is_not":false,"summary":null,"term":"GO:0061838"}]},"cv_name":"cellular_component","definition":"A histone-variant containing protein complex which forms a centromere specific nucleosome-like structure, involved in centromeric chromatin organization.","definition_xrefs":["PMID:22304917","PMID:22304909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00935":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CENP-T-W-S-X complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061838","terms_by_termid":{"GO:0061838":null}}


id: GO:0102847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102847)","termid":"GO:0102847"}


id: PBO:0067047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 67, pseudogene","termid":"PBO:0067047"}


id: GO:0034279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = 9-beta-pimara-7,15-diene + diphosphate.","definition_xrefs":["RHEA:25560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"syn-pimara-7,15-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-4883","KEGG_REACTION:R09117","EC:4.2.3.35"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase (9beta-pimara-7,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034279"}


id: GO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-light-chain = ADP + myosin-light-chain phosphate.","definition_xrefs":["EC:2.7.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0004672","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"myosin light chain kinase activity","secondary_identifiers":["Reactome:R-HSA-5668978","Reactome:R-HSA-445813","RHEA:22004","MetaCyc:2.7.11.18-RXN"],"synonyms":[{"name":"ATP:myosin-light-chain O-phosphotransferase","type":"broad"},{"name":"ATP:myosin-light-chain O-phosphotransferase activity","type":"related"},{"name":"MLCK","type":"related"},{"name":"MLCkase activity","type":"related"},{"name":"STK18","type":"related"},{"name":"calcium/calmodulin-dependent myosin light chain kinase activity","type":"related"},{"name":"myosin kinase activity","type":"related"},{"name":"myosin light chain protein kinase activity","type":"related"},{"name":"myosin light-chain kinase","type":"broad"},{"name":"myosin light-chain kinase (phosphorylating)","type":"related"},{"name":"myosin light-chain kinase (phosphorylating) activity","type":"related"},{"name":"myosin light-chain kinase activity","type":"related"},{"name":"myosin-light-chain kinase activity","type":"exact"},{"name":"smooth-muscle-myosin-light-chain kinase activity","type":"narrow"}],"termid":"GO:0004687"}


id: PBO:0004128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof2","termid":"PBO:0004128"}


id: PBO:0110466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a master non-coding RNA antagonizing inflammation","termid":"PBO:0110466"}


id: PBO:0063148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATL1 divergent transcript","termid":"PBO:0063148"}


id: PBO:0054710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2119","termid":"PBO:0054710"}


id: PBO:0064525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit E","termid":"PBO:0064525"}


id: GO:0046982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nonidentical protein to form a heterodimer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dimerization activity","termid":"GO:0046983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein heterodimerization activity","termid":"GO:0046982"}


id: GO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of abscisic acid levels in host (obsolete GO:0075343)","termid":"GO:0075343"}


id: PBO:0029416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation_during_meiosis","termid":"PBO:0029416"}


id: PBO:0087820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (47 kDa); involved in promoter binding and RNA polymerase II transcription initiation","termid":"PBO:0087820"}


id: PBO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 2","termid":"PBO:0061993"}


id: GO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"ocellus development","termid":"GO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus morphogenesis","termid":"GO:0048816"}


id: GO:0032479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of type I interferon production","synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479"}


id: PBO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydrolase-like","termid":"PBO:0000806"}


id: PR:O14289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leu2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.03","synonyms":[{"name":"IPMI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-leu2","type":"exact"},{"name":"alpha-IPM isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"isopropylmalate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14289"}


id: PBO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_results_in_movement_of","termid":"PBO:0034416"}


id: PBO:0074216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 2","termid":"PBO:0074216"}


id: PBO:0062798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 3","termid":"PBO:0062798"}


id: PBO:0086324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to Kre9p; Kre9p is involved in cell wall beta 1,6-glucan synthesis; overproduction suppresses growth defects of a kre9 null mutant; required for propionic acid resistance","termid":"PBO:0086324"}


id: GO:0007119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unlocalized bud growth such that the entire surface of the bud expands evenly, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell isotropic bud growth","synonyms":[{"name":"isotropic bud growth","type":"broad"}],"termid":"GO:0007119"}


id: GO:0015015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification, often by sulfation, of sugars incorporated into heparan sulfate after polymerization.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate proteoglycan metabolic process","termid":"GO:0030201"},{"relation_name":"part_of","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process, enzymatic modification","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan formation, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process, enzymatic modification","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, enzymatic modification","type":"related"}],"termid":"GO:0015015"}


id: GO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + L-lysine = phosphate + N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"lysine N-acetyltransferase activity, acting on acetyl phosphate as donor","secondary_identifiers":["RHEA:14417","Reactome:R-HSA-5618328","MetaCyc:LYSINE-N-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-5693001"],"synonyms":[{"name":"LAT activity","type":"related"},{"name":"acetyl-phosphate:L-lysine 6-N-acetyltransferase activity","type":"related"},{"name":"acetyl-phosphate:L-lysine N6-acetyltransferase activity","type":"related"},{"name":"lysine N(6)-acetyltransferase activity","type":"related"},{"name":"lysine N6-acetyltransferase activity","type":"related"},{"name":"lysine acetyltransferase activity","type":"exact"}],"termid":"GO:0004468"}


id: PATO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm lacking pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular rhythm","termid":"PATO:0001845"}


id: GO:2000116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2000116"}


id: SO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U5_LTR_region","termid":"SO:0000422"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_five_prime_LTR_region","synonyms":[{"name":"U5 5' long terminal repeat region","type":"exact"},{"name":"U5 five prime LTR region","type":"exact"}],"termid":"SO:0000428"}


id: PBO:0079287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 6","termid":"PBO:0079287"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["UniProtKB:Q92365","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: GO:1901574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chemical substance.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance biosynthetic process (obsolete GO:1901574)","synonyms":[{"name":"chemical substance anabolism","type":"exact"},{"name":"chemical substance biosynthesis","type":"exact"},{"name":"chemical substance biosynthetic process","type":"exact"},{"name":"chemical substance formation","type":"exact"},{"name":"chemical substance synthesis","type":"exact"}],"termid":"GO:1901574"}


id: PBO:0110237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex armadillo-type fold Rix1","termid":"PBO:0110237"}


id: FYPO:0004861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal galactomannan level","termid":"FYPO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall galactomannan level","synonyms":[{"name":"normal cell wall galactomannan accumulation","type":"related"},{"name":"normal cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004861"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: FYPO:0004330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type) at telomeres. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","GO:0051306","PMID:17032733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic telomeric DNA separation","synonyms":[{"name":"normal mitotic chromosome separation at telomere","type":"exact"},{"name":"normal mitotic sister chromatid separation at telomere","type":"exact"},{"name":"normal mitotic telomere disjunction","type":"exact"},{"name":"normal mitotic telomeric DNA separation during vegetative growth","type":"exact"},{"name":"normal telomere separation","type":"exact"},{"name":"normal telomeric DNA separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004330"}


id: FYPO:0001750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}


id: GO:0004078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + apo-(3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity (obsolete GO:0004078)","termid":"GO:0004078"}


id: PBO:0078859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 7","termid":"PBO:0078859"}


id: GO:0120307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extended membranous thread which firmly connects the plasma membrane to the cell wall during plasmolysis such that the plasma membrane does not separate from the cell wall completely.","definition_xrefs":["PMID:32397402","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Hechtian strand","secondary_identifiers":["Wikipedia:Hechtian_strand"],"termid":"GO:0120307"}


id: PBO:0080463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visual system homeobox 2","termid":"PBO:0080463"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: GO:0060870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of floral organ abscission.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall disassembly involved in floral organ abscission","termid":"GO:0060870"}


id: PBO:0039430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin 1","termid":"PBO:0039430"}


id: PBO:0068923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 166, pseudogene","termid":"PBO:0068923"}


id: PBO:0011185
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0011185"}


id: PR:P14575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11403:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.04","secondary_identifiers":["UniProtKB:P14575"],"synonyms":[{"name":"SPMIT.04","type":"related"},{"name":"Spom972h-MT-CO3","type":"exact"},{"name":"cytochrome c oxidase polypeptide III (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14575"}


id: GO:0042706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"}


id: GO:0090064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule nucleation","termid":"GO:0090063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0065003","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"activation of microtubule nucleation","termid":"GO:0090064"}


id: GO:0021959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal process is a member of those that make up the cuneatus tract, a group of axons that are from neurons involved in proprioception from the upper trunk and upper limb.","definition_xrefs":["GO_REF:0000021","PMID:12867698","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuneatus tract morphogenesis","synonyms":[{"name":"tract of Burdach morphogenesis","type":"exact"}],"termid":"GO:0021959"}


id: GO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains. In Saccharomyces cerevisiae, the complex comprises Ubc13p and Mms2p; in human it comprises UBE2N and UBE2V1/UBE2V2; and in plants UBC35/UBC36 and UEV1A/UEV1B/UEV1C/UEV1D-4.","definition_xrefs":["PMID:16129784","PMID:15772086","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"UBC13-MMS2 complex","synonyms":[{"name":"UBE2N/UBE2NL complex","type":"narrow"},{"name":"UBE2V1/UBE2V2 complex","type":"narrow"},{"name":"Uev1A-ben complex","type":"narrow"},{"name":"ubc-13-uev-1 complex","type":"narrow"},{"name":"BEN-UEV1A complex","type":"exact"}],"termid":"GO:0031372"}


id: PR:O94703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04551","PANTHER:PTHR11239:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.03","secondary_identifiers":["UniProtKB:O94703"],"synonyms":[{"name":"DNA-directed RNA polymerase I 13.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZNRD1","type":"exact"}],"termid":"PR:O94703"}


id: GO:1990295
data:
  {"annotated_genes":["SJAG_02336","SJAG_03073","SJAG_00930","SJAG_01297","SJAG_02045","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97980,100088,100436,104778],"is_not":false,"summary":null,"term":"GO:1990295"},{"annotations":[97979,93546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905759"},{"annotations":[87961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"A cytoskeletal part that consists of an array of microtubules and associated molecules that forms at the end of anaphase, and in which microtubules are nucleated from an equatorial microtubule organizing center.","definition_xrefs":["PMID:9601091","PMID:17072892","PMID:11792817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01297":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"post-anaphase microtubule array","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAA","type":"exact"},{"name":"post-anaphase array","type":"exact"}],"termid":"GO:1990295","terms_by_termid":{"GO:1905759":null,"GO:1905760":null,"GO:1990295":null}}


id: GO:0035032
data:
  {"annotated_genes":["SJAG_02699","SJAG_01876","SJAG_04860","SJAG_00114","SJAG_03403","SJAG_04552"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98678,108042,91195,89199,94154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[98679,89200,94155,102237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A phosphatidylinositol 3-kinase complex that contains a catalytic class III phosphoinositide 3-kinase (PI3K) subunit bound to a regulatory (adaptor) subunit. Additional adaptor proteins may be present. Class III PI3Ks have a substrate specificity restricted to phosphatidylinositol (PI).","definition_xrefs":["GOC:bf","PMID:9255069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex","termid":"GO:0005942"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class III","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"class III PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class III","type":"exact"}],"termid":"GO:0035032","terms_by_termid":{"GO:0034271":null,"GO:0034272":null}}


id: GO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-prenyl-L-cysteine + O2 + H2O = a prenal + L-cysteine + H2O2.","definition_xrefs":["GOC:hjd","RHEA:53892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prenylcysteine oxidase activity","secondary_identifiers":["MetaCyc:RXN-18932","EC:1.8.3.5"],"synonyms":[{"name":"S-prenyl-L-cysteine:oxygen oxidoreductase activity","type":"related"},{"name":"prenylcysteine lyase activity","type":"related"}],"termid":"GO:0001735"}


id: PBO:0072861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl-tRNA synthetase 2, mitochondrial","termid":"PBO:0072861"}


id: GO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to tumor cell","termid":"GO:0002836"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response to tumor cell","synonyms":[{"name":"activation of immune response to tumor cell","type":"narrow"},{"name":"positive regulation of immune response to tumour cell","type":"exact"},{"name":"stimulation of immune response to tumor cell","type":"narrow"},{"name":"up regulation of immune response to tumor cell","type":"exact"},{"name":"up-regulation of immune response to tumor cell","type":"exact"},{"name":"upregulation of immune response to tumor cell","type":"exact"}],"termid":"GO:0002839"}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000032","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: GO:0018588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tri-n-butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyldibutyltin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tri-n-butyltin dioxygenase activity (obsolete GO:0018588)","synonyms":[{"name":"TBT dioxygenase activity","type":"exact"}],"termid":"GO:0018588"}


id: PBO:0052948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation associated protein","termid":"PBO:0052948"}


id: PBO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase base subunit of the 19S RP of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions; RP is the acronym for regulatory particle","termid":"PBO:0085030"}


id: PBO:0084499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for chromosome synapsis; displays Red1p dependent localization to the unsynapsed axial-lateral elements of the synaptonemal complex; required for chiasma formation; in vitro, displays the ability to promote intra- and intermolecular synapsis between double-stranded DNA molecules and to fold DNA into rigid protein-DNA filaments","termid":"PBO:0084499"}


id: PBO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 2","termid":"PBO:0045969"}


id: PBO:0005709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lysine-tRNA ligase (predicted)","termid":"PBO:0005709"}


id: PBO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein (prediected)","termid":"PBO:0000451"}


id: PBO:0090983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylglycerol lipase","termid":"PBO:0090983"}


id: GO:0141088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the activation of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","synonyms":[{"name":"induction of host autophagy","type":"exact"},{"name":"positive regulation by symbiont of host autophagy","type":"exact"}],"termid":"GO:0141088"}


id: PBO:0011489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-N, kinetochore protein Mis15","termid":"PBO:0011489"}


id: FYPO:0005785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a shorter time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah","PMID:26882497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased duration of protein-protein interaction","synonyms":[{"name":"decreased duration of protein binding","type":"exact"},{"name":"reduced duration of protein-protein interaction","type":"exact"}],"termid":"FYPO:0005785"}


id: PBO:0030189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_topoisomerase_II_activity","termid":"PBO:0030189"}


id: GO:0090728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.","definition_xrefs":["GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brood size","termid":"GO:0060378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brood size","termid":"GO:0090728"}


id: PR:G2TRJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1834.13 gene.","definition_xrefs":["UniProtKB:G2TRJ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein c1834.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.13","synonyms":[{"name":"Spom972h-SPAC1834.13","type":"exact"}],"termid":"PR:G2TRJ7"}


id: PBO:0027769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_anaphase","termid":"PBO:0027769"}


id: MOD:00730
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a arabinose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"arabinosylated","synonyms":[{"name":"Ara","type":"exact"}],"termid":"MOD:00730"}


id: PBO:0062417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 53 pseudogene","termid":"PBO:0062417"}


id: GO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that increases the rate or extent of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060864)","termid":"GO:0060864"}


id: GO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-serine.","definition_xrefs":["RESID:AA0195"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine racemization (obsolete GO:0019126)","termid":"GO:0019126"}


id: PBO:0040157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 3","termid":"PBO:0040157"}


id: PBO:0069095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 342, pseudogene","termid":"PBO:0069095"}


id: PBO:0091520
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mak1/mak2/mak3 triple deletion functionally complemented by Candida albicans CHK1","termid":"PBO:0091520"}


id: PBO:0067440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 561, pseudogene","termid":"PBO:0067440"}


id: PBO:0091732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase Ymr31/Kgd4","termid":"PBO:0091732"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: PBO:0048983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 11","termid":"PBO:0048983"}


id: GO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anilide + H2O = a carboxylate + aniline + H+.","definition_xrefs":["EC:3.5.1.13","RHEA:20297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"aryl-acylamidase activity","secondary_identifiers":["MetaCyc:ARYL-ACYLAMIDASE-RXN","KEGG_REACTION:R01862"],"synonyms":[{"name":"AAA-1","type":"related"},{"name":"AAA-2","type":"related"},{"name":"aryl-acylamide amidohydrolase activity","type":"related"},{"name":"brain acetylcholinesterase (is associated with AAA-2)","type":"related"},{"name":"pseudocholinesterase (associated with arylacylamidase)","type":"related"}],"termid":"GO:0047680"}


id: MOD:00288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively doubly cross-links an L-glutamic acid residue and an L-tyrosine residue with a carbon-carbon bond and a carbon-nitrogen bond to form pyrroloquinoline quinone.","definition_xrefs":["PubMed:1310505","ChEBI:18315","PubMed:7665488","RESID:AA0283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroloquinoline quinone","synonyms":[{"name":"2,4,6-tricarboxylic-pyrrolo[2,3-5,6]quinoline 8,9-quinone","type":"exact"},{"name":"2,7,9-tricarboxy-1H-pyrrolo(2,3-f)quinoline-4,5-dione","type":"exact"},{"name":"4,5-dihydro-4,5-dioxo-1H-pyrrolo[2,3-5,6]quinoline-2,7,9-tricarboxylic acid","type":"exact"},{"name":"CROSSLNK Pyrroloquinoline quinone (Glu-Tyr)","type":"exact"},{"name":"coenzyme PQQ","type":"exact"},{"name":"methoxatin","type":"exact"},{"name":"pyrroloquinoline quinone","type":"exact"}],"termid":"MOD:00288"}


id: PBO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase (predicted)","termid":"PBO:0002669"}


id: GO:0030665
data:
  {"annotated_genes":["SJAG_02177","SJAG_04644","SJAG_00379","SJAG_04517","SJAG_04565","SJAG_02805","SJAG_02282","SJAG_00104","SJAG_04609","SJAG_00108","SJAG_02453","SJAG_01809","SJAG_01167","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85490,90758],"is_not":false,"summary":null,"term":"GO:0030665"},{"annotations":[109295,115380,109509,97677],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[92833,104856,108174,108115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[109418,91459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[114991,111389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin coated vesicle membrane","type":"narrow"}],"termid":"GO:0030665","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030665":null}}


id: PBO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory associated protein of MTOR complex 1","termid":"PBO:0072548"}


id: PBO:0017071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR94","termid":"PBO:0017071"}


id: GO:0072167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"mesonephric tubule formation","termid":"GO:0072172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric tubule identity","termid":"GO:0072167"}


id: PATO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration of temperature which is lesser relative to the normal or average enduring or continuing in time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased duration","termid":"PATO:0000499"},{"relation_name":"is_a","term_name":"duration of temperature","termid":"PATO:0001310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased duration of temperature","termid":"PATO:0001311"}


id: PBO:0109095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1748 family protein Atg44","termid":"PBO:0109095"}


id: PBO:0113399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; localizes to cytosol and peroxisomes; similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2","termid":"PBO:0113399"}


id: PBO:0026949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_centromere_central_core","termid":"PBO:0026949"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: PBO:0042881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 221","termid":"PBO:0042881"}


id: GO:0010521
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91664],"is_not":false,"summary":null,"term":"GO:0010521"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of telomerase.","definition_xrefs":["GOC:tb","GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0030234","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"telomerase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010521","terms_by_termid":{"GO:0010521":null}}


id: PBO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin, GTPase activator Tsc2","termid":"PBO:0036236"}


id: FYPO:0007086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated vegetative cell during sulfur starvation","synonyms":[{"name":"elongated cell during sulfur starvation during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to sulfur starvation","type":"exact"},{"name":"elongated vegetative cell during sulfur starvation during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during sulphur starvation","type":"exact"}],"termid":"FYPO:0007086"}


id: PBO:0088271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5","termid":"PBO:0088271"}


id: PBO:0062919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidinergic receptor P2Y4","termid":"PBO:0062919"}


id: GO:0044380
data:
  {"annotated_genes":["SJAG_00918","SJAG_01224","SJAG_00883","SJAG_01211","SJAG_06270","SJAG_05266","SJAG_02514","SJAG_00229","SJAG_02529","SJAG_02045","SJAG_00279","SJAG_02228","SJAG_02695","SJAG_03508","SJAG_04455","SJAG_01790","SJAG_03915","SJAG_04901","SJAG_02831","SJAG_00082","SJAG_01546","SJAG_05220","SJAG_05319","SJAG_03437","SJAG_01371","SJAG_01775","SJAG_02731","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90028,101563,104070,106698,92211,97824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[103766],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[103696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[93551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[110442,87874,93444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[87966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[115142,88903,107325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[86588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[93347,97074,110609,106420,86334,85728,87561,113426,104035,95199,105410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the cytoskeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00279":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02045":null,"SJAG_02228":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_02831":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_03915":null,"SJAG_04455":null,"SJAG_04703":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cytoskeleton","type":"exact"}],"termid":"GO:0044380","terms_by_termid":{"GO:0035372":null,"GO:0044379":null,"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1902543":null,"GO:1904498":null,"GO:1904518":null,"GO:1990976":null}}


id: PR:P87125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureD-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.09c","synonyms":[{"name":"Spom972h-ure4","type":"exact"}],"termid":"PR:P87125"}


id: GO:0010420
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111381],"is_not":false,"summary":null,"term":"GO:0010420"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-5-polyprenylbenzoic acid + S-adenosyl-L-methionine = 3-methoxy-4-hydroxy-5-polyprenylbenzoic acid + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:23190198","RHEA:44452","PMID:9628017","PMID:10419476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990886","Reactome:R-HSA-2162193","EC:2.1.1.114","MetaCyc:RXN-9281"],"synonyms":[{"name":"polyprenyldihydroxybenzoate methyltransferase activity","type":"related"}],"termid":"GO:0010420","terms_by_termid":{"GO:0010420":null}}


id: GO:1900497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006790","GO:0044248","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900497"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: PBO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inturned planar cell polarity protein","termid":"PBO:0051750"}


id: GO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an autophagosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["PMID:26763909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"autophagosome localization","termid":"GO:0061906"}


id: PBO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 60","termid":"PBO:0071058"}


id: MOD:01671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using free L-asparagine and releasing ammonia.","definition_xrefs":["RESID:AA0525#THR","PubMed:8706862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-isoaspartyl threonine intermediate","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01671"}


id: PR:O14056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase assembly protein COX19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein cox19, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.04c","secondary_identifiers":["UniProtKB:O14056"],"synonyms":[{"name":"SPCC1672.04c","type":"related"},{"name":"Spom972h-COX19","type":"exact"}],"termid":"PR:O14056"}


id: PBO:0038774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T2","termid":"PBO:0038774"}


id: PBO:0027694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_latrunculin_A","termid":"PBO:0027694"}


id: PBO:0087055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication","termid":"PBO:0087055"}


id: PBO:0054008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1338","termid":"PBO:0054008"}


id: PBO:0063344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 4","termid":"PBO:0063344"}


id: PBO:0090542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Efr3-like","termid":"PBO:0090542"}


id: GO:0060358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of L-leucine import. L-leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of L-leucine import (obsolete GO:0060358)","synonyms":[{"name":"negative regulation of leucine import","type":"broad"}],"termid":"GO:0060358"}


id: PBO:0058532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6077","termid":"PBO:0058532"}


id: GO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045567)","synonyms":[{"name":"down regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045567"}


id: FYPO:0003555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing in subtelomeric regions is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at subtelomere","synonyms":[{"name":"normal chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at telomere","type":"related"}],"termid":"FYPO:0003555"}


id: PBO:0071728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 26","termid":"PBO:0071728"}


id: GO:0034487
data:
  {"annotated_genes":["SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"vacuolar amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar amino acid membrane transport","type":"exact"}],"termid":"GO:0034487","terms_by_termid":{"GO:0034488":null}}


id: GO:0008252
data:
  {"annotated_genes":["SJAG_03096","SJAG_02580","SJAG_02959","SJAG_01702","SJAG_02593","SJAG_02582","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008441"},{"annotations":[110217,84183,90931,84184,87133,110218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008253"},{"annotations":[113686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050484"},{"annotations":[105032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate.","definition_xrefs":["RHEA:22140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01702":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NSP I","type":"related"},{"name":"NSP II","type":"related"},{"name":"acid nucleotidase activity","type":"related"},{"name":"deoxyinosine-activated nucleotidase (DIAN)","type":"related"},{"name":"deoxyribonucleoside-activated nucleotidase (DAN)","type":"related"},{"name":"nucleotide phosphohydrolase activity","type":"related"},{"name":"nucleotide-specific phosphatase activity","type":"related"}],"termid":"GO:0008252","terms_by_termid":{"GO:0008253":null,"GO:0008441":null,"GO:0050483":null,"GO:0050484":null}}


id: PBO:0075489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 2, pseudogene","termid":"PBO:0075489"}


id: PBO:0067907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 209","termid":"PBO:0067907"}


id: PR:O43005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl1 gene.","definition_xrefs":["UniProtKB:O43005","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.06c","synonyms":[{"name":"Spom972h-apl1","type":"exact"},{"name":"beta-2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 beta large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43005"}


id: PBO:0064918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3A","termid":"PBO:0064918"}


id: PR:O94534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.07","synonyms":[{"name":"Spom972h-alp14","type":"exact"},{"name":"altered polarity protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94534"}


id: PBO:0088055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)","termid":"PBO:0088055"}


id: PBO:0039676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit mu 1","termid":"PBO:0039676"}


id: PR:Q9HDY1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase spindle elongation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.09","secondary_identifiers":["PR:000027518","UniProtKB:Q9HDY1"],"synonyms":[{"name":"SPAPB1A10.09","type":"related"},{"name":"Spom972h-ase1","type":"exact"}],"termid":"PR:Q9HDY1"}


id: GO:0102725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 24-methyldesmosterol + NADPH = campesterol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 24-methyldesmosterol reductase activity (obsolete GO:0102725)","termid":"GO:0102725"}


id: SO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H2B protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK12_acetylation_site","synonyms":[{"name":"H2BK12 acetylation site","type":"exact"},{"name":"H2BK12ac","type":"exact"}],"termid":"SO:0001937"}


id: FYPO:0000359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the mitochondrion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion","termid":"FYPO:0004943"},{"relation_name":"output_of","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial morphology","synonyms":[{"name":"abnormal mitochondrial morphology during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial morphology during vegetative growth","type":"exact"},{"name":"mitochondrial morphology: abnormal","type":"related"}],"termid":"FYPO:0000359"}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: PBO:0049560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 26","termid":"PBO:0049560"}


id: PBO:0057618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-1","termid":"PBO:0057618"}


id: _global:encompasses
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"_global:during_which_starts"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","secondary_identifiers":["RO:0002085"],"termid":"_global:encompasses"}


id: FYPO:0004859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002946","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased cell wall polysaccharide level","synonyms":[{"name":"increased cell wall polysaccharide accumulation","type":"related"},{"name":"increased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"increased cell wall polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0004859"}


id: PBO:0062629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 6","termid":"PBO:0062629"}


id: PBO:0079050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 6-1","termid":"PBO:0079050"}


id: GO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chitin-based cuticle tanning","termid":"GO:0045800"},{"relation_name":"is_a","term_name":"negative regulation of cuticle pigmentation","termid":"GO:0048080"},{"relation_name":"is_a","term_name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"},{"relation_name":"negatively_regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult chitin-containing cuticle pigmentation","synonyms":[{"name":"down regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"down-regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"downregulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"inhibition of adult chitin-containing cuticle pigmentation","type":"narrow"}],"termid":"GO:0048083"}


id: PR:Q09670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.04 gene.","definition_xrefs":["UniProtKB:Q09670","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase C5H10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.04","synonyms":[{"name":"Old yellow enzyme homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC5H10.04","type":"exact"}],"termid":"PR:Q09670"}


id: PATO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased diameter","termid":"PATO:0001715"}


id: GO:0033794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + methylamine + thioredoxin disulfide = N-methylglycine + phosphate + thioredoxin.","definition_xrefs":["EC:1.21.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sarcosine reductase activity","secondary_identifiers":["RHEA:12825"],"synonyms":[{"name":"acetyl-phosphate methylamine:thioredoxin disulfide oxidoreductase (N-methylglycine-forming) activity","type":"related"}],"termid":"GO:0033794"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: PBO:0113441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transport protein, functional homolog of human NPC2 Niemann-Pick disease type C2 protein; together with Ncr1p mediates integration of ergosterol into vacuolar membrane; functions as general “lipid solubilizer”, binds variety of amphiphilic lipid ligands; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; yeast NPC2 can complement mutations in human NPC2","termid":"PBO:0113441"}


id: GO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that controls blood pressure by sensing the amount of stretch occurring in the atria.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial baroreceptor feedback","synonyms":[{"name":"atrial baroreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"atrial control of blood pressure","type":"related"},{"name":"atrial low pressure baroreceptor regulation of blood pressure","type":"exact"},{"name":"atrial reflex","type":"related"}],"termid":"GO:0002015"}


id: GO:1902030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K18 acetylation (obsolete GO:1902030)","synonyms":[{"name":"down regulation of histone H3 acetylation at K18","type":"exact"},{"name":"down regulation of histone H3-K18 acetylation","type":"exact"},{"name":"down regulation of histone H3K18 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"down-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"down-regulation of histone H3K18 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K18","type":"exact"},{"name":"downregulation of histone H3-K18 acetylation","type":"exact"},{"name":"downregulation of histone H3K18 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K18","type":"exact"},{"name":"inhibition of histone H3-K18 acetylation","type":"narrow"},{"name":"inhibition of histone H3K18 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K18","type":"exact"},{"name":"negative regulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902030"}


id: _global:results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","secondary_identifiers":["RO:0002356","GOREL:0001021"],"termid":"_global:results_in_specification_of"}


id: PBO:0090789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6/Erp1","termid":"PBO:0090789"}


id: GO:0009270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a humidity stimulus, moisture in the atmosphere.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to humidity","termid":"GO:0009270"}


id: PBO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.32","termid":"PBO:0004630"}


id: PBO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin ortholog Bhd1","termid":"PBO:0004010"}


id: GO:0047185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminate + acetyl-CoA = N-acetyl-4-O-acetylneuraminate + CoA.","definition_xrefs":["EC:2.3.1.44","RHEA:18305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"N-acetylneuraminate 4-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.44-RXN","KEGG_REACTION:R01806"],"synonyms":[{"name":"acetyl-CoA:N-acetylneuraminate 4-O-acetyltransferase activity","type":"related"},{"name":"sialate O-acetyltransferase","type":"broad"}],"termid":"GO:0047185"}


id: PBO:0074731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 89","termid":"PBO:0074731"}


id: FYPO:0005448
data:
  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phenotype in which a specific biological process does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00993":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01330":null,"SJAG_01665":null,"SJAG_01718":null,"SJAG_01745":null,"SJAG_01794":null,"SJAG_02252":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_02923":null,"SJAG_03143":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03892":null,"SJAG_04009":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04551":null},"genotype_count":21,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with 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abolished","type":"exact"}],"termid":"FYPO:0005448","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000272":null,"FYPO:0000280":null,"FYPO:0001132":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002998":null,"FYPO:0004105":null,"FYPO:0004318":null,"FYPO:0004481":null,"FYPO:0006557":null,"FYPO:0007177":null,"FYPO:0007789":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid2","termid":"PBO:0002667"}


id: PBO:0074029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 17","termid":"PBO:0074029"}


id: PBO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 1","termid":"PBO:0039680"}


id: GO:1901259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any rRNA processing that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chloroplast rRNA processing","termid":"GO:1901259"}


id: GO:0097474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["CL:0000573","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell apoptotic process","synonyms":[{"name":"cone photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097474"}


id: GO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a filamin, any member of a family of high molecular mass cytoskeletal proteins that crosslink actin filaments to form networks and stress fibers. Filamins contain an amino-terminal alpha-actinin-like actin binding domain, which is followed by a rod-domain composed of 4 to 24 100-residue repetitive segments including a carboxy-terminal dimerization domain.","definition_xrefs":["PMID:11336782","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"filamin binding","secondary_identifiers":["GO:0031007","GO:0031006","GO:0031008"],"synonyms":[{"name":"ABP-278/276 binding","type":"narrow"},{"name":"ABP-280 binding","type":"narrow"},{"name":"ABPL binding","type":"narrow"},{"name":"alpha-filamin binding","type":"narrow"},{"name":"beta-filamin binding","type":"narrow"},{"name":"filamin A binding","type":"narrow"},{"name":"filamin B binding","type":"narrow"},{"name":"filamin C binding","type":"exact"},{"name":"filamin-1 binding","type":"narrow"},{"name":"filamin-2 binding","type":"narrow"},{"name":"filamin-3 binding","type":"narrow"},{"name":"filamin-A binding","type":"narrow"},{"name":"filamin-B binding","type":"exact"},{"name":"filamin-C binding","type":"narrow"},{"name":"gamma-filamin binding","type":"narrow"}],"termid":"GO:0031005"}


id: PBO:0089558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanosine 34-2'-O)-methyltransferase regulator Trm734","termid":"PBO:0089558"}


id: PBO:0110198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.1","termid":"PBO:0110198"}


id: GO:0009258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"10-formyltetrahydrofolate metabolic process","termid":"GO:0009256"},{"relation_name":"is_a","term_name":"folic acid-containing compound catabolic process","termid":"GO:0009397"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"10-formyltetrahydrofolate catabolic process","synonyms":[{"name":"10-formyl-THF catabolic process","type":"exact"},{"name":"10-formyl-THF catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate breakdown","type":"exact"},{"name":"10-formyltetrahydrofolate catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate degradation","type":"exact"}],"termid":"GO:0009258"}


id: GO:2000585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"positive regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000585"}


id: FYPO:0004136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in telomeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0002820"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at telomeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at telomere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0004136"}


id: GO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + 2 monodehydroascorbate = NAD+ + 2 ascorbate.","definition_xrefs":["EC:1.6.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"monodehydroascorbate reductase (NADH) activity","secondary_identifiers":["MetaCyc:1.6.5.4-RXN","RHEA:14581"],"synonyms":[{"name":"AFR","type":"related"},{"name":"AFR-reductase activity","type":"related"},{"name":"MDAsA reductase (NADPH)","type":"related"},{"name":"MDHA","type":"related"},{"name":"NADH-semidehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:AFR oxidoreductase activity","type":"related"},{"name":"NADH:ascorbate radical oxidoreductase activity","type":"related"},{"name":"NADH:monodehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:semidehydroascorbic acid oxidoreductase activity","type":"related"},{"name":"SDA reductase activity","type":"related"},{"name":"ascorbate free radical reductase activity","type":"related"},{"name":"ascorbate free-radical reductase activity","type":"related"},{"name":"ascorbic free radical reductase activity","type":"related"},{"name":"monodehydroascorbate reductase activity","type":"exact"},{"name":"semidehydroascorbate reductase activity","type":"related"}],"termid":"GO:0016656"}


