# terms

id: PBO:0075923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 15","termid":"PBO:0075923"}


id: GO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the activation small G proteins such as Rho, Rac, and Cdc42 which, in turn activate effectors, including C-Jun N-terminal kinase (JNK) and Rho kinase (Rok). The signaling ends with change in the transcription of target genes and/or reorganisation of the cytoskeleton.","definition_xrefs":["PMID:28293032","PMID:37804416","PMID:11532397","PMID:25349257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"PCP pathway","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt-JNK signaling pathway","type":"related"},{"name":"Wnt-PCP signaling pathway","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"related"},{"name":"planar cell polarity pathway","type":"exact"}],"termid":"GO:0060071"}


id: GO:0043292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"contractile muscle fiber","synonyms":[{"name":"contractile fibre","type":"exact"}],"termid":"GO:0043292"}


id: PBO:0110824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Toe2","termid":"PBO:0110824"}


id: PBO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030205"}


id: PBO:0074463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 5 (pseudogene)","termid":"PBO:0074463"}


id: GO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043376"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of CD8-positive, alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043377"}


id: GO:0009473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c7 (triheme) (obsolete GO:0009473)","synonyms":[{"name":"cytochrome c7 (triheme)","type":"exact"}],"termid":"GO:0009473"}


id: PBO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 1","termid":"PBO:0061060"}


id: FYPO:0005019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septum assembly","termid":"FYPO:0000673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of septum assembly","synonyms":[{"name":"normal duration of division septum assembly","type":"exact"},{"name":"normal duration of septation","type":"broad"},{"name":"normal duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"normal duration of septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005019"}


id: GO:1905626
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89902],"is_not":false,"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17556368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-methionine import across plasma membrane","termid":"GO:1905624"},{"relation_name":"positively_regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905626","terms_by_termid":{"GO:1905626":null}}


id: PBO:0090224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Cdc42 (Gef1)","termid":"PBO:0090224"}


id: PBO:0004476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn6 (predicted)","termid":"PBO:0004476"}


id: GO:0008079
data:
  {"annotated_genes":["SJAG_05221","SJAG_02189","SJAG_03232","SJAG_01696","SJAG_02601","SJAG_02812","SJAG_01518","SJAG_00308","SJAG_00338","SJAG_04283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91698,91699,101242,105700,105701],"is_not":false,"summary":null,"term":"GO:0008079"},{"annotations":[112546,98622,114004,87676,92507,95224,103712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[95225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[87677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"Functions in the termination of translation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity, RNA binding","termid":"GO:0008135"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02812":null,"SJAG_03232":null,"SJAG_04283":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"translation termination factor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008079","terms_by_termid":{"GO:0003747":null,"GO:0008079":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1","termid":"PBO:0071753"}


id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: PBO:0056191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA3 divergent transcript","termid":"PBO:0056191"}


id: PBO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase D pseudogene 1","termid":"PBO:0043786"}


id: FYPO:0007080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and occurs as part of the first meiotic nuclear division, is abnormal.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abnormal initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abnormal initial mitotic SPB separation in meiosis I","type":"exact"}],"termid":"FYPO:0007080"}


id: GO:0035107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage morphogenesis","termid":"GO:0035107"}


id: PBO:0068518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 112, pseudogene","termid":"PBO:0068518"}


id: PBO:0017590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-ATPase chaperone Atp11 (predicted)","termid":"PBO:0017590"}


id: PBO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion","termid":"PBO:0043062"}


id: PBO:0053687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 880","termid":"PBO:0053687"}


id: PBO:0063995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 29","termid":"PBO:0063995"}


id: GO:0019827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types.","definition_xrefs":["GOC:mah","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"maintenance of cell number","termid":"GO:0098727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell population maintenance","synonyms":[{"name":"maintenance of pluripotency","type":"related"}],"termid":"GO:0019827"}


id: FYPO:0005297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity","termid":"FYPO:0005297"}


id: GO:0032711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-27 production","termid":"GO:0032671"},{"relation_name":"negatively_regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-27 production","secondary_identifiers":["GO:0045535"],"synonyms":[{"name":"down regulation of interleukin-27 production","type":"exact"},{"name":"down-regulation of interleukin-27 production","type":"exact"},{"name":"downregulation of interleukin-27 production","type":"exact"},{"name":"inhibition of interleukin-27 production","type":"narrow"},{"name":"negative regulation of IL-27 production","type":"exact"},{"name":"negative regulation of interleukin-27 biosynthetic process","type":"narrow"}],"termid":"GO:0032711"}


id: FYECO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Both M-factor and P-factor, endogenously produced by cells, were present in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000055 M and P factor produced (obsolete FYECO:0000055)","synonyms":[{"name":"presence of M-factor and P-factor","type":"exact"},{"name":"presence of mating pheromones","type":"exact"}],"termid":"FYECO:0000055"}


id: GO:0071909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the stomach with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of digestive tract left/right asymmetry","termid":"GO:0071907"},{"relation_name":"part_of","term_name":"stomach development","termid":"GO:0062094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stomach left/right asymmetry","termid":"GO:0071909"}


id: PBO:0080994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 25","termid":"PBO:0080994"}


id: FYPO:0001959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level during nitrogen starvation","synonyms":[{"name":"normal cAMP accumulation during nitrogen starvation","type":"related"},{"name":"normal cAMP level during nitrogen depletion","type":"exact"},{"name":"normal cAMP level during nitrogen deprivation","type":"exact"},{"name":"normal cellular cAMP level during nitrogen starvation","type":"exact"},{"name":"normal cyclic AMP level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001959"}


id: FYPO:0005479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"decreased protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to arsenite ion","type":"exact"}],"termid":"FYPO:0005479"}


id: GO:0020026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron-dense organelle with a granular internal matrix found throughout the merozoite life cycle stage of apicomplexan parasites; contains proteins destined to be secreted into the parasitophorous vacuole following parasite invasion of a host cell.","definition_xrefs":["GOC:mb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"merozoite dense granule","synonyms":[{"name":"dense body","type":"related"}],"termid":"GO:0020026"}


id: GO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of proteins that induce or sustain apoptosis to an active form.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of pro-apoptotic gene products (obsolete GO:0008633)","synonyms":[{"name":"activation of pro-apoptotic gene products","type":"exact"},{"name":"induction of pro-apoptotic gene products","type":"related"}],"termid":"GO:0008633"}


id: PBO:0054772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2184","termid":"PBO:0054772"}


id: PBO:0082028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; involved with Gas2p in spore wall assembly; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082028"}


id: GO:0019602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 3-hydroxytoluene (m-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-3-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 3-hydroxytoluene","termid":"GO:0019602"}


id: PBO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Hba1","termid":"PBO:0090364"}


id: GO:0039655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of a virus between adjacent cells in a multicellular organism using plasmodesmata. Plasmodesma is a fine cytoplasmic channel found in all higher plants, which connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["VZ:1018","UniProtKB-KW:KW-0916"],"gene_count":0,"genotype_count":0,"name":"obsolete transport of virus in host, cell to cell via plasmodesmata (obsolete GO:0039655)","synonyms":[{"name":"spread of virus in host, cell to cell via plasmodesmata","type":"related"},{"name":"viral movement protein","type":"related"}],"termid":"GO:0039655"}


id: PBO:0029797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_distribution","termid":"PBO:0029797"}


id: GO:0106050
data:
  {"annotated_genes":["SJAG_01375","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87521,94421],"is_not":false,"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing a 2'-O-nucleotide.","definition_xrefs":["PMID:17242307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_01375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0140101","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6788668","Reactome:R-HSA-6788684","Reactome:R-HSA-9024159"],"termid":"GO:0106050","terms_by_termid":{"GO:0106050":null}}


id: PBO:0078962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-5","termid":"PBO:0078962"}


id: GO:0051087
data:
  {"annotated_genes":["SJAG_04228","SJAG_00564","SJAG_04817","SJAG_00436","SJAG_03135","SJAG_03794","SJAG_03094","SJAG_01545","SJAG_01160","SJAG_04187","SJAG_04518","SJAG_03955","SJAG_02077","SJAG_01684","SJAG_00403","SJAG_04014","SJAG_00574","SJAG_01914","SJAG_01737","SJAG_04336","SJAG_01121","SJAG_03784"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58211,58846,60723,66354,67616,69339,69632,71064,72318,74143,75445,75811,76891,78360,78484],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[79058,65822,79334,77172,58767,66272,70472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"}]},"cv_name":"molecular_function","definition":"Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.","definition_xrefs":["PMID:10585443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00564":null,"SJAG_00574":null,"SJAG_01121":null,"SJAG_01160":null,"SJAG_01545":null,"SJAG_01684":null,"SJAG_01737":null,"SJAG_01914":null,"SJAG_02077":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03784":null,"SJAG_03794":null,"SJAG_03955":null,"SJAG_04014":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04336":null,"SJAG_04518":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein-folding chaperone binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"chaperone binding","type":"broad"},{"name":"chaperone protein binding","type":"exact"},{"name":"co-chaperone activity","type":"related"},{"name":"co-chaperonin activity","type":"related"}],"termid":"GO:0051087","terms_by_termid":{"GO:0030544":null,"GO:0051087":null}}


id: GO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye morphogenesis","secondary_identifiers":["GO:0048594","GO:0048595"],"synonyms":[{"name":"camera-style eye morphogenesis","type":"exact"}],"termid":"GO:0048593"}


id: GO:1904657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GOC:mr","PMID:1716172","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of sweet taste","termid":"GO:1904656"},{"relation_name":"negatively_regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of sweet taste","synonyms":[{"name":"down regulation of sensory perception of sweet taste","type":"exact"},{"name":"down regulation of sweet taste perception","type":"exact"},{"name":"down-regulation of sensory perception of sweet taste","type":"exact"},{"name":"down-regulation of sweet taste perception","type":"exact"},{"name":"downregulation of sensory perception of sweet taste","type":"exact"},{"name":"downregulation of sweet taste perception","type":"exact"},{"name":"inhibition of sensory perception of sweet taste","type":"narrow"},{"name":"inhibition of sweet taste perception","type":"narrow"},{"name":"negative regulation of sweet taste perception","type":"exact"}],"termid":"GO:1904657"}


id: PBO:0029963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hydrogen_ion_transporting_ATP_synthase_activity,_rotational_mechanism","termid":"PBO:0029963"}


id: PBO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel regulator","termid":"PBO:0052213"}


id: PBO:0082755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082755"}


id: GO:1904618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin binding.","definition_xrefs":["GO_REF:0000059","PMID:8621557","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of actin binding","termid":"GO:1904616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin binding","synonyms":[{"name":"activation of actin binding","type":"narrow"},{"name":"activation of membrane associated actin binding","type":"narrow"},{"name":"positive regulation of membrane associated actin binding","type":"narrow"},{"name":"up regulation of actin binding","type":"exact"},{"name":"up regulation of membrane associated actin binding","type":"narrow"},{"name":"up-regulation of actin binding","type":"exact"},{"name":"up-regulation of membrane associated actin binding","type":"narrow"},{"name":"upregulation of actin binding","type":"exact"},{"name":"upregulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904618"}


id: PBO:0060131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 32","termid":"PBO:0060131"}


id: FYPO:0005134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to micafungin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to micafungin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to micafungin","type":"exact"}],"termid":"FYPO:0005134"}


id: PBO:0054478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1878","termid":"PBO:0054478"}


id: PR:O14073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl aminopeptidase C2E11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.08","synonyms":[{"name":"Spom972h-SPACUNK4.08","type":"exact"}],"termid":"PR:O14073"}


id: PR:O13687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.07","synonyms":[{"name":"Spom972h-vma4","type":"exact"},{"name":"V-ATPase subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13687"}


id: PBO:0067147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 197, pseudogene","termid":"PBO:0067147"}


id: GO:0099622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across the plasma membrane of a cardiac muscle cell such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization","termid":"GO:0086009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}


id: PBO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 2","termid":"PBO:0048631"}


id: PR:O14276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fyv7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fyv7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.07","synonyms":[{"name":"Spom972h-fyv7","type":"exact"}],"termid":"PR:O14276"}


id: PR:P36582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pck1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-like 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.14c","synonyms":[{"name":"Spom972h-pck1","type":"exact"}],"termid":"PR:P36582"}


id: PBO:0018153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Nts1","termid":"PBO:0018153"}


id: PBO:0054375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1770","termid":"PBO:0054375"}


id: PBO:0084706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ADP/ATP translocator; exchanges cytosolic ADP for mitochondrially synthesized ATP; expressed under anaerobic conditions; similar to Aac1p; has roles in maintenance of viability and in respiration; AAC3 has a paralog, PET9, that arose from the whole genome duplication","termid":"PBO:0084706"}


id: GO:1903495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GO_REF:0000071","PMID:3585228","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to dehydroepiandrosterone","termid":"GO:1903494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dehydroepiandrosterone","termid":"GO:1903495"}


id: GO:0097156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of motor neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:lb","PMID:18403711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of motor neuron axon","termid":"GO:0097156"}


id: GO:0090175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of planar polarity, the coordinated organization of groups of cells in a tissue, such that they all orient to similar coordinates.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of planar polarity","termid":"GO:0090175"}


id: PBO:0027471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sanglifehrin_A_binding","termid":"PBO:0027471"}


id: PBO:0062109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 7 pseudogene","termid":"PBO:0062109"}


id: PBO:0079600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E3 divergent transcript","termid":"PBO:0079600"}


id: PBO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase","termid":"PBO:0061531"}


id: GO:1990584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.","definition_xrefs":["GOC:ame","PMID:12840750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"troponin complex","termid":"GO:0005861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cardiac Troponin complex","synonyms":[{"name":"cTnC:cTnI:cTnT","type":"related"}],"termid":"GO:1990584"}


id: PBO:0087878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genes","termid":"PBO:0087878"}


id: GO:1990961
data:
  {"annotated_genes":["SJAG_03951","SJAG_01145","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93060,113531,114455],"is_not":false,"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell.","definition_xrefs":["PMID:28355133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic export from cell","termid":"GO:0046618"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"part_of","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0098754","GO:0051179"],"is_obsolete":false,"name":"xenobiotic detoxification by transmembrane export across the plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"drug transmembrane export","type":"narrow"}],"termid":"GO:1990961","terms_by_termid":{"GO:1990961":null}}


id: PBO:0071333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 10","termid":"PBO:0071333"}


id: PBO:0012036
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPCC663.03, pmd1 is more closely related to S. cerevisiae STE6","termid":"PBO:0012036"}


id: PBO:0051008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 3","termid":"PBO:0051008"}


id: MOD:01753
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01753"}


id: GO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-zeaxanthin + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-violaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:32443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"zeaxanthin epoxidase activity","secondary_identifiers":["GO:0052663","KEGG_REACTION:R10070","GO:0009540","EC:1.14.15.21","MetaCyc:RXN-13193"],"synonyms":[{"name":"antheraxanthin epoxidase activity","type":"narrow"},{"name":"zea-epoxidase activity","type":"related"},{"name":"zeaxanthin epoxidase [overall] activity","type":"related"}],"termid":"GO:0052662"}


id: PR:O74738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase set10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.13c","synonyms":[{"name":"SET domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set10","type":"exact"}],"termid":"PR:O74738"}


id: GO:1903214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial protein import","type":"related"},{"name":"regulation of mitochondrial translocation","type":"related"},{"name":"regulation of protein import into mitochondrion","type":"exact"},{"name":"regulation of protein targeting to mitochondria","type":"exact"},{"name":"regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903214"}


id: GO:0006696
data:
  {"annotated_genes":["SJAG_03598","SJAG_01474","SJAG_03715","SJAG_03249","SJAG_03750","SJAG_03929","SJAG_03024","SJAG_02855","SJAG_02982","SJAG_03235","SJAG_02104","SJAG_03531","SJAG_00370","SJAG_00453","SJAG_00624","SJAG_04810","SJAG_00717","SJAG_04270","SJAG_02719","SJAG_00413","SJAG_04217","SJAG_00770","SJAG_04018","SJAG_02044","SJAG_04865","SJAG_03018","SJAG_04499","SJAG_01307","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85063,85286,85322,86245,88070,89120,89174,91205,93162,94606,95420,100811,101000,101231,103053,104060,104239,104373,105771,106614,107832,108332,111412,111744,113055],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[90451],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[106378],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[85153,102368,85152],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergosterol metabolic process","termid":"GO:0008204"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"phytosteroid biosynthetic process","termid":"GO:0016129"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ergosterol anabolism","type":"exact"},{"name":"ergosterol biosynthesis","type":"exact"},{"name":"ergosterol formation","type":"exact"},{"name":"ergosterol synthesis","type":"exact"}],"termid":"GO:0006696","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of liquid by a lung epithelial cell that contributes to an increase in size of the lung as part of its development.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"lung growth","termid":"GO:0060437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"secretion by lung epithelial cell involved in lung growth","synonyms":[{"name":"fetal lung liquid secretion","type":"related"}],"termid":"GO:0061033"}


id: RO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x immediate transformation of y iff x immediately succeeds y temporally at a time boundary t, and all of the matter present in x at t is present in y at t, and all the matter in y at t is present in x at t","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_develops_from","termid":"RO:0002207"},{"relation_name":"is_a","term_name":"transformation_of","termid":"RO:0002494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate_transformation_of","termid":"RO:0002495"}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: GO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075155)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075155"}


id: GO:0004198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"calcium-dependent cysteine-type endopeptidase activity","secondary_identifiers":["Reactome:R-HSA-8863012","Reactome:R-HSA-8848658"],"synonyms":[{"name":"calpain activity","type":"narrow"}],"termid":"GO:0004198"}


id: GO:0031235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a plasma membrane consisting of gene products and protein complexes that have some covalently attached part (e.g. peptide sequence or GPI anchor) which is embedded in the cytoplasmic side of the plasma membrane only.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of the cytoplasmic side of the plasma membrane (obsolete GO:0031235)","synonyms":[{"name":"intrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"intrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"intrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031235"}


id: PBO:0085601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; SDS23 has a paralog, SDS24, that arose from the whole genome duplication","termid":"PBO:0085601"}


id: PBO:0075023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-34","termid":"PBO:0075023"}


id: PBO:0110268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb3","termid":"PBO:0110268"}


id: PBO:0066091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASA3 intronic transcript 1","termid":"PBO:0066091"}


id: PBO:0085843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; induced by treatment with 8-methoxypsoralen and UVA irradiation; contains 10-11 predicted transmembrane domains","termid":"PBO:0085843"}


id: PBO:0028318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitochondrial_fission_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028318"}


id: GO:0015107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chlorate, ClO3-, from one side of a membrane to the other.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chlorate transmembrane transporter activity","termid":"GO:0015107"}


id: GO:0009461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome containing heme bound to the protein by one or, more (commonly two) thioether bonds involving sulfhydryl groups of cysteine residues.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c (obsolete GO:0009461)","termid":"GO:0009461"}


id: MOD:01893
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-malonyl-L-lysine.","definition_xrefs":["RESID:AA0568","PubMed:8349414","PubMed:21908771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-malonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(carboxyacetyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(carboxyacetyl)azanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-malonyllysine","type":"exact"},{"name":"N(epsilon)-(malonyl)lysine","type":"exact"},{"name":"N6-(carboxyacetyl)lysine","type":"exact"},{"name":"N6-malonyl-L-lysine","type":"exact"},{"name":"N6-malonyllysine","type":"exact"},{"name":"malonyllysine","type":"exact"}],"termid":"MOD:01893"}


id: GO:0032834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032831"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0032832"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"activation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"narrow"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"},{"name":"stimulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"narrow"},{"name":"up regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"up-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"upregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"}],"termid":"GO:0032834"}


id: GO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"regulation of TLR8 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034159"}


id: PBO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephronectin","termid":"PBO:0061395"}


id: GO:0039550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces IRF3-dependent gene transcription, by preventing or reducing IRF3 binding to promoter sites.","definition_xrefs":["PMID:21632562"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of DNA binding (obsolete GO:0039550)","synonyms":[{"name":"inhibition by virus of host IRF3-DNA binding","type":"exact"}],"termid":"GO:0039550"}


id: FYPO:0009082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of potassium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of potassium chloride and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"hypersensitive to potassium chloride and MMS","type":"exact"},{"name":"hypersensitive to potassium chloride and methyl methanesulfonate","type":"exact"},{"name":"sensitive to potassium chloride and MMS","type":"exact"},{"name":"sensitive to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"sensitive to potassium chloride and MMS in combination","type":"exact"},{"name":"sensitive to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to potassium chloride and methyl methanesulfonate in combination","type":"exact"}],"termid":"FYPO:0009082"}


id: GO:0042255
data:
  {"annotated_genes":["SJAG_02840","SJAG_03012","SJAG_02754","SJAG_00572","SJAG_03846","SJAG_00523","SJAG_00882","SJAG_01839","SJAG_03773","SJAG_00722","SJAG_04304","SJAG_04599","SJAG_01811","SJAG_01122","SJAG_02477","SJAG_04992","SJAG_03466","SJAG_02868","SJAG_02749","SJAG_04004","SJAG_04066","SJAG_02427","SJAG_01454","SJAG_04940","SJAG_03496","SJAG_00949","SJAG_03424","SJAG_04998","SJAG_05248","SJAG_05679","SJAG_01606","SJAG_02759","SJAG_02830","SJAG_01161","SJAG_02952","SJAG_03458","SJAG_04395","SJAG_02508","SJAG_03617","SJAG_01568","SJAG_01548","SJAG_02436","SJAG_04746","SJAG_02335","SJAG_00323","SJAG_04669","SJAG_01169","SJAG_00689","SJAG_01339","SJAG_02390","SJAG_02479","SJAG_00513","SJAG_04180","SJAG_01296","SJAG_03080","SJAG_02535","SJAG_04108","SJAG_04492","SJAG_02803","SJAG_04524","SJAG_03798","SJAG_01420","SJAG_02184","SJAG_02340","SJAG_03155"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105231],"is_not":false,"summary":null,"term":"GO:0042255"},{"annotations":[97145,100053,105535,99069,107966,102525,108661,109415,115399,112286,86211,103967,94543,112671,89780,97287,88963,113162,107333,89380,95748,112287,96957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[107261,113085,98455,98454,94544,100825,91404,111869,101743,93638,100596,107262,111868,100675,99070,101337,113084,96026,84246,88670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[92436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042256"},{"annotations":[104910],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[108513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061668"},{"annotations":[112161,94051,99035,94050,114693,89936,99036],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"},{"annotations":[93986,97022,107937,108138,102202,108139,100405,74110,103337,112945,115109,108599,98283,98282,86466,93139,103338,102201,108140,108303,107938,98281,93987,91327],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[104153,109585],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the mature ribosome and of its subunits.","definition_xrefs":["PMID:30467428","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00323":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00572":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01169":null,"SJAG_01296":null,"SJAG_01339":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01548":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02184":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02390":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02749":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02803":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03424":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03617":null,"SJAG_03773":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04746":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_04998":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0042257"],"synonyms":[{"name":"ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0042255","terms_by_termid":{"GO:0000027":null,"GO:0000028":null,"GO:0034462":null,"GO:0042255":null,"GO:0042256":null,"GO:0061668":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: GO:0044634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, alternative pathway in another organism (obsolete GO:0044634)","synonyms":[{"name":"negative regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044634"}


id: GO:0032295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which satellite glial cells isolate neuronal cell bodies.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ensheathment of neurons","termid":"GO:0007272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neuronal cell bodies","termid":"GO:0032295"}


id: MOD:00236
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(ADP-ribosyl)-L-asparagine.","definition_xrefs":["PubMed:15842200","RESID:AA0231","PubMed:2498316","Unimod:213#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4-(ADP-ribosyl)-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)-4-oxobutanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylasparagine","type":"exact"},{"name":"N4-(ADP-ribosyl)-L-asparagine","type":"exact"},{"name":"N4-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-asparagine","type":"exact"},{"name":"N4-alpha-D-ribofuranosyl-L-asparagine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:00236"}


id: PBO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_anaphase","termid":"PBO:0031599"}


id: GO:1900991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of scopolamine.","definition_xrefs":["PMID:16720272","GOC:TermGenie","GOC:yaf","PMID:18251710","PMID:32879484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"scopolamine biosynthetic process","secondary_identifiers":["GO:1900989"],"synonyms":[{"name":"scopolamine anabolism","type":"exact"},{"name":"scopolamine biosynthesis","type":"exact"},{"name":"scopolamine formation","type":"exact"},{"name":"scopolamine metabolic process","type":"broad"},{"name":"scopolamine metabolism","type":"broad"},{"name":"scopolamine synthesis","type":"exact"}],"termid":"GO:1900991"}


id: PBO:0111296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interpro_version","termid":"PBO:0111296"}


id: PBO:0077963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 16-1","termid":"PBO:0077963"}


id: PBO:0091363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, stationary phase specific","termid":"PBO:0091363"}


id: PBO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis and planar polarity effector complex subunit 2","termid":"PBO:0043800"}


id: PBO:0041593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B","termid":"PBO:0041593"}


id: GO:0009468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete diheme class I cytochrome c (obsolete GO:0009468)","synonyms":[{"name":"diheme class I cytochrome c","type":"exact"}],"termid":"GO:0009468"}


id: PBO:0072874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyl transferase like 1","termid":"PBO:0072874"}


id: GO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["FMA:9907","GOC:sr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parasympathetic nervous system development","termid":"GO:0048486"}


id: PBO:0113144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is required for non-nitrogen-starvation (NNS)-induced autophagy, and is a subcomplex of the SEA, a coatomer-related complex that associates with the vacuole; Iml1p functions as a GAP for the Rag family GTPase Gtr1p (EGOC subunit) in SEACIT, resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; role in the oxidative stress response","termid":"PBO:0113144"}


id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: PBO:0012594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 1 Pre3 (predicted)","termid":"PBO:0012594"}


id: PBO:0042429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37, HSP90 cochaperone","termid":"PBO:0042429"}


id: PBO:0074337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2","termid":"PBO:0074337"}


id: PBO:0072008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 10","termid":"PBO:0072008"}


id: PBO:0048312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 23","termid":"PBO:0048312"}


id: GO:0030292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of a protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase inhibitor activity","termid":"GO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"protein tyrosine kinase inhibitor activity","termid":"GO:0030292"}


id: GO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of SNARE complex disassembly","termid":"GO:0035541"}


id: PBO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MZF1 antisense RNA 1","termid":"PBO:0060389"}


id: PBO:0047064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member A","termid":"PBO:0047064"}


id: GO:0016095
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61127],"is_not":false,"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["GOC:go_curators","Wikipedia:Polyprenol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyprenol catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"polyprenol breakdown","type":"exact"},{"name":"polyprenol catabolism","type":"exact"},{"name":"polyprenol degradation","type":"exact"}],"termid":"GO:0016095","terms_by_termid":{"GO:0016095":null}}


id: PBO:0078472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (GTG) 2-1","termid":"PBO:0078472"}


id: GO:0051581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter transport","termid":"GO:0051589"},{"relation_name":"negatively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurotransmitter uptake","synonyms":[{"name":"down regulation of neurotransmitter uptake","type":"exact"},{"name":"down-regulation of neurotransmitter uptake","type":"exact"},{"name":"downregulation of neurotransmitter uptake","type":"exact"},{"name":"negative regulation of neurotransmitter import","type":"exact"}],"termid":"GO:0051581"}


id: PR:Q09833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 23S rRNA (uracil-5-)-methyltransferase rumA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil(54)-C(5))-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.07c","secondary_identifiers":["UniProtKB:Q09833"],"synonyms":[{"name":"Spom972h-rumA","type":"exact"}],"termid":"PR:Q09833"}


id: PBO:0087782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087782"}


id: PBO:0080196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 4","termid":"PBO:0080196"}


id: GO:0098061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virus contained within the capsid shell, and usually containing the viral genome and accessory proteins.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, internal space","synonyms":[{"name":"internal head protein","type":"exact"}],"termid":"GO:0098061"}


id: PBO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter (predicted)","termid":"PBO:0001212"}


id: PBO:0070616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1","termid":"PBO:0070616"}


id: PBO:0068196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 503","termid":"PBO:0068196"}


id: PBO:0070259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 4, pseudogene","termid":"PBO:0070259"}


id: PATO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased curvature","termid":"PATO:0001593"}


id: PATO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete secondary (obsolete PATO:0002532)","termid":"PATO:0002532"}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: PBO:0073825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 4","termid":"PBO:0073825"}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["GOC:go_curators","PMID:9082980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: PBO:0066245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 2","termid":"PBO:0066245"}


id: PBO:0056366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 3","termid":"PBO:0056366"}


id: GO:0045140
data:
  {"annotated_genes":["SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94074],"is_not":false,"summary":null,"term":"GO:0045140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phytoceramide + inositol phosphate = inositol phosphoceramide + diacylglycerol.","definition_xrefs":["PMID:9405490","PMID:9614099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"inositol phosphoceramide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.227","MetaCyc:RXN3O-581"],"synonyms":[{"name":"IPC synthase activity","type":"exact"}],"termid":"GO:0045140","terms_by_termid":{"GO:0045140":null}}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: PBO:0054949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2363","termid":"PBO:0054949"}


id: GO:0035405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a threonine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-threonine phosphorylation (obsolete GO:0035405)","synonyms":[{"name":"histone threonine phosphorylation","type":"exact"}],"termid":"GO:0035405"}


id: GO:0120226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to succinyl-CoA, an omega-carboxyacyl-CoA having succinoyl as the S-acyl component.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"succinyl-CoA binding","synonyms":[{"name":"succinyl-coenzyme A binding","type":"exact"}],"termid":"GO:0120226"}


id: PBO:0083390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps IES1/YFL013C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083390"}


id: GO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell increases the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory synapse","secondary_identifiers":["Wikipedia:Excitatory_synapse"],"termid":"GO:0060076"}


id: PBO:0053119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 9","termid":"PBO:0053119"}


id: PBO:0068015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 320","termid":"PBO:0068015"}


id: PBO:0057495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 613","termid":"PBO:0057495"}


id: GO:0004736
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101968],"is_not":false,"summary":null,"term":"GO:0004736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + pyruvate = ADP + 2 H+ + oxaloacetate + phosphate.","definition_xrefs":["RHEA:20844","EC:6.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00344","Reactome:R-HSA-70501","MetaCyc:PYRUVATE-CARBOXYLASE-RXN"],"synonyms":[{"name":"pyruvate:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"pyruvic carboxylase activity","type":"related"}],"termid":"GO:0004736","terms_by_termid":{"GO:0004736":null}}


id: GO:0016742
data:
  {"annotated_genes":["SJAG_02901","SJAG_01814","SJAG_04681","SJAG_05200","SJAG_03641","SJAG_01368","SJAG_01766","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003864"},{"annotations":[92974,109543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004047"},{"annotations":[87881,91058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004372"},{"annotations":[87578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004479"},{"annotations":[115485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004643"},{"annotations":[113862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:mah","EC:2.1.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01368":null,"SJAG_01766":null,"SJAG_01814":null,"SJAG_02901":null,"SJAG_03641":null,"SJAG_03914":null,"SJAG_04681":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"hydroxymethyl-, formyl- and related transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016742","terms_by_termid":{"GO:0003864":null,"GO:0004047":null,"GO:0004372":null,"GO:0004479":null,"GO:0004643":null,"GO:0004644":null}}


id: GO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an S-layer enveloping the cell. The S-layer is a crystalline protein layer surrounding some bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-layer organization","synonyms":[{"name":"S-layer organisation","type":"exact"},{"name":"S-layer organization and biogenesis","type":"related"}],"termid":"GO:0045232"}


id: GO:0035308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process the stops, prevents, or reduces the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein dephosphorylation (obsolete GO:0035308)","synonyms":[{"name":"down regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"downregulation of protein amino acid dephosphorylation","type":"exact"},{"name":"inhibition of protein amino acid dephosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035308"}


id: GO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphate(out) = ADP + phosphate + phosphate(in).","definition_xrefs":["EC:7.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled phosphate ion transmembrane transporter activity","secondary_identifiers":["RHEA:24440","MetaCyc:ABC-27-RXN"],"synonyms":[{"name":"phosphate porter activity","type":"exact"},{"name":"ABC phosphate transporter activity","type":"narrow"},{"name":"ATP phosphohydrolase (phosphate-importing)","type":"related"},{"name":"phosphate ABC transporter","type":"narrow"},{"name":"phosphate ion transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphate transporting ATPase activity","type":"exact"},{"name":"phosphate-transporting ATPase activity","type":"related"}],"termid":"GO:0015415"}


id: PBO:0059807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 33","termid":"PBO:0059807"}


id: GO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by a steroid hormone binding to a receptor.","definition_xrefs":["PMID:12606724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"steroid hormone receptor signaling pathway","synonyms":[{"name":"steroid hormone mediated signalling","type":"exact"},{"name":"steroid hormone-mediated signaling pathway","type":"exact"}],"termid":"GO:0043401"}


id: PBO:0078961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-4","termid":"PBO:0078961"}


id: PBO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS domain","termid":"PBO:0002531"}


id: PR:O74434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug174 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 174 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.03c","synonyms":[{"name":"Spom972h-mug174","type":"exact"}],"termid":"PR:O74434"}


id: SO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding transcript that contains a protein coding gene within its intronic sequence on the same strand, with no overlap of exonic sequence.","definition_xrefs":["GENECODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA","synonyms":[{"name":"sense overlap lncRNA","type":"exact"},{"name":"sense_overlap_lncRNA","type":"exact"},{"name":"sense_overlapping","type":"exact"}],"termid":"SO:0002132"}


id: SO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"In mRNA, a set of three nucleotides that indicates the end of information for protein synthesis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Stop_codon"],"synonyms":[{"name":"stop codon","type":"exact"}],"termid":"SO:0000319"}


id: PBO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.5","termid":"PBO:0000567"}


id: GO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"negatively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"negative regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061882"}


id: GO:0070825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single cone-shaped specialization that forms an opening in the egg chorion that allows sperm entry into the egg prior to fertilization.","definition_xrefs":["GOC:cvs","GOC:mah","PMID:18649270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"egg chorion","termid":"GO:0042600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chrorion micropyle","termid":"GO:0070825"}


id: PBO:0088294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","termid":"PBO:0088294"}


id: GO:0009024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-tagatose 6-phosphate = ADP + D-tagatose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tagatose-6-phosphate kinase activity","secondary_identifiers":["MetaCyc:TAGAKIN-RXN","RHEA:12420"],"synonyms":[{"name":"ATP:D-tagatose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphotagatokinase activity","type":"related"}],"termid":"GO:0009024"}


id: GO:0042399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["PMID:11823218","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ectoine metabolic process","synonyms":[{"name":"ectoine metabolism","type":"exact"}],"termid":"GO:0042399"}


id: GO:0140346
data:
  {"annotated_genes":["SJAG_01945","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96045,109017],"is_not":false,"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:11870854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminophospholipid flippase activity","termid":"GO:0015247"},{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140346","terms_by_termid":{"GO:0140346":null}}


id: PBO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hypoxia","termid":"PBO:0035933"}


id: GO:1902882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:16899554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to oxidative stress","termid":"GO:1902882"}


id: PBO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_causally_upstream_of","termid":"PBO:0034394"}


id: PBO:0053118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 8","termid":"PBO:0053118"}


id: GO:0070242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a thymocyte, an immature T cell located in the thymus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","CL:0000893","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymocyte apoptotic process","synonyms":[{"name":"immature T cell apoptosis","type":"related"},{"name":"thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070242"}


id: PATO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000097 herbicide sensitivity (obsolete PATO:0000097)","termid":"PATO:0000097"}


id: PBO:0090069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu1","termid":"PBO:0090069"}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: GO:2000271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process.","definition_xrefs":["GOC:yaf","GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of fibroblast apoptotic process","termid":"GO:2000269"},{"relation_name":"positively_regulates","term_name":"fibroblast apoptotic process","termid":"GO:0044346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast apoptotic process","synonyms":[{"name":"positive regulation of fibroblast apoptosis","type":"narrow"}],"termid":"GO:2000271"}


id: PBO:0040498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A interacting protein 1","termid":"PBO:0040498"}


id: GO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl cysteine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0244"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine thiazolecarboxylic acid (obsolete GO:0018140)","termid":"GO:0018140"}


id: PBO:0082411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways; forms a complex with another bHLH/Zip protein, Rtg1p, to activate the pathways; target of Hog1p","termid":"PBO:0082411"}


id: PBO:0088121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar glutathione S-conjugate transporter; ABC-C transporter of the ATP-binding cassette family; required for vacuole fusion; forms stable complexes with vacuole fusion machinery; regulates Vam7p recruitment to vacuoles; role in detoxifying metals (Cd, Hg, As); transports GSSG that is not immediately reduced in cytosol to vacuole; transports unconjugated bilirubin, selenodigluthatione, oxidized glutathione; similar to human cystic fibrosis protein CFTR","termid":"PBO:0088121"}


id: GO:0051165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine metabolic process","synonyms":[{"name":"2,5-dihydroxypyridine metabolism","type":"exact"},{"name":"pyridine-2,5-diol metabolic process","type":"exact"}],"termid":"GO:0051165"}


id: GO:0043262
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110469],"is_not":false,"summary":null,"term":"GO:0043262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H2O = AMP + phosphate + H+.","definition_xrefs":["RHEA:61436","PMID:1470606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10862"],"synonyms":[{"name":"ADP diphosphatase activity","type":"broad"},{"name":"ADPase","type":"broad"},{"name":"ADPase activity","type":"related"},{"name":"ATP diphosphohydrolase activity","type":"related"},{"name":"ATP-diphosphatase activity","type":"related"},{"name":"adenosine diphosphatase activity","type":"related"},{"name":"adenosine-diphosphatase activity","type":"exact"}],"termid":"GO:0043262","terms_by_termid":{"GO:0043262":null}}


id: GO:0035992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a tendon. This process pertains to the initial formation of a tendon from unspecified parts.","definition_xrefs":["UBERON:0000043","GOC:yaf","PMID:17567668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"tendon development","termid":"GO:0035989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon formation","termid":"GO:0035992"}


id: PBO:0065245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 16","termid":"PBO:0065245"}


id: PBO:0067370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 471, pseudogene","termid":"PBO:0067370"}


id: PBO:0053296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 2","termid":"PBO:0053296"}


id: PBO:0038549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 4","termid":"PBO:0038549"}


id: PBO:0045636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 48 (pseudogene)","termid":"PBO:0045636"}


id: PBO:0073256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN7 divergent transcript","termid":"PBO:0073256"}


id: PBO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor Coa2 (predicted)","termid":"PBO:0036324"}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: GO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mg-protoporphyrin IX + S-adenosyl-L-methionine = Mg-protoporphyrin IX 13-monomethyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:17809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"magnesium protoporphyrin IX methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN","EC:2.1.1.11","KEGG_REACTION:R04237"],"synonyms":[{"name":"(-)-S-adenosyl-L-methionine:magnesium-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"Mg-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Mg protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin-IX O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-magnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosylmethioninemagnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"magnesium-protoporphyrin O-methyltransferase activity","type":"exact"}],"termid":"GO:0046406"}


id: PBO:0026906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_multiseptate_cell_with_central_constriction","termid":"PBO:0026906"}


id: GO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein-1 gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"CCL9 production","type":"exact"},{"name":"MIP-1g production","type":"exact"},{"name":"chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071607"}


id: SO:0000493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site like CACAGTG, part of a 3' D-recombination signal sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_heptamer","synonyms":[{"name":"3'D-HEPTAMER","type":"exact"},{"name":"three prime D heptamer","type":"exact"}],"termid":"SO:0000493"}


id: FYPO:0002867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of orotidine 5'-phosphate (orotidine monophosphate; OMP) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular OMP level","synonyms":[{"name":"increased OMP accumulation","type":"related"},{"name":"increased cellular OMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular OMP level during vegetative growth","type":"exact"},{"name":"increased cellular orotidine 5'-(dihydrogen phosphate) level","type":"exact"},{"name":"increased cellular orotidine monophosphate level","type":"exact"}],"termid":"FYPO:0002867"}


id: GO:0061857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response to endoplasimic reticulum stress in which nascent proteins are degraded by attenuation of their translocation into the ER followed by rerouting to the cytosol without cleavage of the signal peptide, and subsequent degradation by the proteasome.","definition_xrefs":["PMID:17129784","PMID:26565908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum stress-induced pre-emptive quality control","synonyms":[{"name":"ER pQC","type":"exact"},{"name":"ER stress-indiced pre-emptive quality control","type":"exact"}],"termid":"GO:0061857"}


id: PBO:0089206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Aly3","termid":"PBO:0089206"}


id: PBO:0005626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Ste6","termid":"PBO:0005626"}


id: GO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which renal water excretion is decreased.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of urine volume","termid":"GO:0035811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water retention","synonyms":[{"name":"negative regulation of renal water excretion","type":"exact"}],"termid":"GO:0003092"}


id: PBO:0084630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase; catalyzes the transfer of a methyl group from S-adenosylmethionine to the GpppN terminus of capped mRNA; nuclear protein that relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084630"}


id: PBO:0048951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 2","termid":"PBO:0048951"}


id: PBO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 60","termid":"PBO:0070593"}


id: PBO:0088052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs; receives sulfur from the E1-like enzyme Uba4p and transfers it to tRNA; also functions as a protein tag with roles in nutrient sensing and oxidative stress response","termid":"PBO:0088052"}


id: GO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction directed at self antigens.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to self antigen","termid":"GO:0002513"}


id: GO:0033159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein import into nucleus, translocation (obsolete GO:0033159)","synonyms":[{"name":"negative regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033159"}


id: PBO:0066335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 1","termid":"PBO:0066335"}


id: PBO:0076299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope family member 3","termid":"PBO:0076299"}


id: PBO:0086086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase of the ER membrane; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; involved in ER quality control; functions as a heterodimer with Pmt2p but can also pair with Pmt5p; antifungal drug target; PMT2 has a paralog, PMT3, that arose from the whole genome duplication","termid":"PBO:0086086"}


id: GO:0032115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol + NADP+ = L-sorbose + H+ + NADPH. The reaction may occur, to a minor extent, in the reverse direction.","definition_xrefs":["EC:1.1.1.289","RHEA:14609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sorbose reductase activity","secondary_identifiers":["MetaCyc:1.1.1.289-RXN","KEGG_REACTION:R07346"],"synonyms":[{"name":"D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"Sou1p","type":"related"}],"termid":"GO:0032115"}


id: PBO:0057209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376c","termid":"PBO:0057209"}


id: SO:1000022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from T to G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_to_G_transversion","synonyms":[{"name":"T to G transversion","type":"exact"}],"termid":"SO:1000022"}


id: GO:0150070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginase activity.","definition_xrefs":["PMID:26670206","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arginase activity","termid":"GO:0150070"}


id: GO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pigmentation","termid":"GO:0048067"}


id: GO:0010492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of shoot apical meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb","GOC:dph","PMID:17461786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of shoot apical meristem identity","termid":"GO:0010492"}


id: PBO:0038617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACE2 divergent transcript","termid":"PBO:0038617"}


id: PBO:0068839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 77, pseudogene","termid":"PBO:0068839"}


id: GO:0097449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from the soma of an astrocyte and wrapping around neurons.","definition_xrefs":["NIF_Subcellular:sao1630537580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"astrocyte projection","synonyms":[{"name":"astrocyte process","type":"exact"},{"name":"peripheral astrocyte process","type":"related"},{"name":"vellous process","type":"related"}],"termid":"GO:0097449"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: GO:0071941
data:
  {"annotated_genes":["SJAG_01461","SJAG_04577","SJAG_04896","SJAG_02766","SJAG_00635","SJAG_00392","SJAG_04679","SJAG_00035","SJAG_03398","SJAG_00412","SJAG_04299","SJAG_05338"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115495,88027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"},{"annotations":[109717,89036,106990,103046,93921,99993,94738,107603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"},{"annotations":[110581,115496,91993,93394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019627"}]},"cv_name":"biological_process","definition":"A nitrogen compound metabolic process that contributes to the nitrogen cycle. The nitrogen cycle is a series of metabolic pathways by which nitrogen is converted between various forms and redox states; it encompasses pathways in which nitrogen is acted upon directly, such as nitrification, denitrification, nitrogen fixation, and mineralization.","definition_xrefs":["PMID:16675690","Wikipedia:Nitrogen_cycle","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_01461":null,"SJAG_02766":null,"SJAG_03398":null,"SJAG_04299":null,"SJAG_04577":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrogen cycle metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071941","terms_by_termid":{"GO:0000050":null,"GO:0019627":null,"GO:0043419":null}}


id: GO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ganglioside metabolic process","synonyms":[{"name":"ganglioside metabolism","type":"exact"}],"termid":"GO:0001573"}


id: PBO:0111068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fbp1 upstream regulatory lncRNA c","termid":"PBO:0111068"}


id: PBO:0082589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-Golgi localized monothiol glutaredoxin, binds Fe-S cluster; more similar in activity to dithiol than other monothiol glutaredoxins; involved in the oxidative stress response; GRX6 has a paralog, GRX7, that arose from the whole genome duplication","termid":"PBO:0082589"}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: GO:0106146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sideretin.","definition_xrefs":["PMID:29581584","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sideretin biosynthesis","termid":"GO:0106146"}


id: GO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of male sex of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male sex determination","termid":"GO:0030238"}


id: PBO:0038440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate aminotransferase","termid":"PBO:0038440"}


id: GO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw","GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to nitrogen starvation (obsolete GO:0030996)","synonyms":[{"name":"cell cycle arrest in response to nitrogen starvation","type":"broad"}],"termid":"GO:0030996"}


id: PBO:0066898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 198","termid":"PBO:0066898"}


id: PBO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_gamma-glutamyl-2-aminobutyrate_level","termid":"PBO:0035766"}


id: PBO:0079260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 32","termid":"PBO:0079260"}


id: PBO:0049137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 1","termid":"PBO:0049137"}


id: PBO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csm1/Pcs1","termid":"PBO:0008152"}


id: PR:O13857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.03c gene.","definition_xrefs":["UniProtKB:O13857","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1A6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.03c","synonyms":[{"name":"Spom972h-SPAC1A6.03c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13857"}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: FYPO:0005733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is increased during a cellular response to iron ion starvation.","definition_xrefs":["PMID:20435771","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutamate-ammonia ligase activity","termid":"FYPO:0002270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased glutamate-ammonia ligase activity during cellular response to iron ion starvation","synonyms":[{"name":"increased GS activity during cellular response to iron ion starvation","type":"exact"},{"name":"increased glutamate-ammonia ligase activity during iron ion starvation","type":"exact"},{"name":"increased glutamine synthetase activity during cellular response to iron ion starvation","type":"exact"},{"name":"increased glutamylhydroxamic synthetase activity during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005733"}


id: PBO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 9","termid":"PBO:0042675"}


id: PBO:0045623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 35 (pseudogene)","termid":"PBO:0045623"}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["GOC:TermGenie","PMID:14648763","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: PBO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_fusion_during_mating","termid":"PBO:0031698"}


id: PBO:0050271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 3","termid":"PBO:0050271"}


id: GO:1901526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion","termid":"GO:1903599"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitophagy","synonyms":[{"name":"activation of macromitophagy","type":"narrow"},{"name":"positive regulation of macromitophagy","type":"exact"},{"name":"up regulation of macromitophagy","type":"exact"},{"name":"up-regulation of macromitophagy","type":"exact"},{"name":"upregulation of macromitophagy","type":"exact"}],"termid":"GO:1901526"}


id: PBO:0040469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase c subunit lysine N-methyltransferase","termid":"PBO:0040469"}


id: PATO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling wood.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/ligneous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous","termid":"PATO:0002348"}


id: PBO:0066849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 149","termid":"PBO:0066849"}


id: PBO:0078524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 15","termid":"PBO:0078524"}


id: GO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibacterial peptide with activity against Gram-negative bacteria.","definition_xrefs":["GOC:add","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}


id: PBO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.31","termid":"PBO:0002211"}


id: GO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H dehydrogenase (obsolete GO:0008751)","synonyms":[{"name":"NAD(P)H dehydrogenase","type":"exact"}],"termid":"GO:0008751"}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: GO:2001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin A4 metabolic process","termid":"GO:2001302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin A4 biosynthetic process","synonyms":[{"name":"LXA4 anabolism","type":"exact"},{"name":"LXA4 biosynthesis","type":"exact"},{"name":"LXA4 biosynthetic process","type":"exact"},{"name":"LXA4 formation","type":"exact"},{"name":"LXA4 synthesis","type":"exact"},{"name":"lipoxin A4 anabolism","type":"exact"},{"name":"lipoxin A4 biosynthesis","type":"exact"},{"name":"lipoxin A4 formation","type":"exact"},{"name":"lipoxin A4 synthesis","type":"exact"}],"termid":"GO:2001303"}


id: GO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by carotid body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in carotid body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003042"}


id: PBO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 5","termid":"PBO:0050630"}


id: PBO:0070435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGRIP1 like","termid":"PBO:0070435"}


id: PATO:0000664
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000664 substance_quantity (obsolete PATO:0000664)","termid":"PATO:0000664"}


id: PBO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from cerevisiae","termid":"PBO:0001154"}


id: GO:0010351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lithium ion into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lithium ion transport","synonyms":[{"name":"lithium transport","type":"exact"}],"termid":"GO:0010351"}


id: GO:0008805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + ferrocytochrome b-561 = CO2 + 2 H+ + 2 ferricytochrome b-561.","definition_xrefs":["GOC:curators","RHEA:48880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carbon-monoxide oxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0650","Wikipedia:Carbon-monoxide_dehydrogenase_(cytochrome_b-561)","GO:0047767","EC:1.2.5.3","MetaCyc:RXN-21452","GO:0018999"],"synonyms":[{"name":"carbon monoxide oxidase activity","type":"related"},{"name":"carbon monoxide oxygenase (cytochrome b-561) activity","type":"narrow"},{"name":"carbon monoxide oxygenase activity","type":"exact"},{"name":"carbon monoxide,water:cytochrome b-561 oxidoreductase activity","type":"related"},{"name":"carbon monoxide:methylene blue oxidoreductase activity","type":"narrow"},{"name":"carbon-monoxide dehydrogenase (cytochrome b-561)","type":"related"},{"name":"cytochrome b561","type":"narrow"}],"termid":"GO:0008805"}


id: PR:O60101
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglycerate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.04c","secondary_identifiers":["UniProtKB:O60101"],"synonyms":[{"name":"SPBC14F5.04c","type":"related"},{"name":"Spom972h-pgk","type":"exact"}],"termid":"PR:O60101"}


id: GO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R.","definition_xrefs":["EC:2.4.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"beta-galactoside (CMP) alpha-2,3-sialyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1022129","Reactome:R-HSA-9845538","MetaCyc:2.4.99.4-RXN","Reactome:R-HSA-9844860","Reactome:R-HSA-3656258","Reactome:R-HSA-9603987","Reactome:R-HSA-9605600","Reactome:R-HSA-981497","RHEA:21616","Reactome:R-HSA-1912378","Reactome:R-HSA-2046285","Reactome:R-HSA-4084984"],"termid":"GO:0003836"}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: GO:0042490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system.","definition_xrefs":["GOC:jl","CL:0000199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation","termid":"GO:0042490"}


id: PBO:0110473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF6 pseudogene 1","termid":"PBO:0110473"}


id: PBO:0051261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-3 (pseudogene)","termid":"PBO:0051261"}


id: MOD:02050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-leucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-leucine residue","synonyms":[{"name":"XlnkLeu","type":"exact"}],"termid":"MOD:02050"}


id: PBO:0088839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4","termid":"PBO:0088839"}


id: PBO:0017658
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly","termid":"PBO:0017658"}


id: PBO:0082013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger containing ubiquitin peptidase 1","termid":"PBO:0082013"}


id: PBO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 11","termid":"PBO:0060575"}


id: PBO:0057784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3064","termid":"PBO:0057784"}


id: PBO:0031291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_growth_phenotype","termid":"PBO:0031291"}


id: GO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:mah","Wikipedia:PH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaline pH","termid":"GO:0010446"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkaline pH","synonyms":[{"name":"cellular response to alkalinity","type":"broad"},{"name":"cellular response to basic pH","type":"exact"}],"termid":"GO:0071469"}


id: PBO:0088535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4","termid":"PBO:0088535"}


id: GO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apelin receptor.","definition_xrefs":["GOC:nln","GOC:mah","GOC:vp","PMID:12787050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"apelin receptor binding","secondary_identifiers":["GO:0042569"],"synonyms":[{"name":"APJ receptor binding","type":"exact"},{"name":"apelin receptor ligand","type":"narrow"}],"termid":"GO:0031704"}


id: GO:0097697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethoxyuridine34 in tRNA + S-adenosyl-L-methionine = 5-methoxycarbonylmethoxyuridine34 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:26681692","RHEA:54080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003674","GO:0003824","GO:0140101","GO:0016741"],"is_obsolete":false,"name":"tRNA (5-carboxymethoxyuridine(34)-5-O)-methyltransferase activity","synonyms":[{"name":"tRNA 5-carboxymethoxyuridine methyltransferase activity","type":"related"}],"termid":"GO:0097697"}


id: GO:2001012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the renal system as it progresses from its formation to the mature state.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in renal system development","synonyms":[{"name":"mesenchymal cell differentiation involved in urinary system development","type":"related"},{"name":"mesenchymal cell differentiation involved in urinary tract development","type":"related"}],"termid":"GO:2001012"}


id: PBO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_by","termid":"PBO:0006195"}


id: PBO:0089230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria ortholog Clu1","termid":"PBO:0089230"}


id: PBO:0076999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 1","termid":"PBO:0076999"}


id: PBO:0028853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_UV","termid":"PBO:0028853"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: GO:0051452
data:
  {"annotated_genes":["SJAG_05294","SJAG_00301","SJAG_00516","SJAG_00212","SJAG_04616","SJAG_01913","SJAG_04955","SJAG_02023","SJAG_00136","SJAG_01817","SJAG_01397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95485,115228,85903,86748,98190,98536,84628,100454,92225,86432,96571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that reduces the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular pH","termid":"GO:0051453"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular pH reduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell pH reduction","type":"exact"},{"name":"cellular acidification","type":"exact"},{"name":"intracellular acidification","type":"related"},{"name":"reduction of cellular pH","type":"exact"},{"name":"reduction of pH in cell","type":"exact"}],"termid":"GO:0051452","terms_by_termid":{"GO:0007035":null}}


id: PATO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"elastic","termid":"PATO:0001171"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elasticity","termid":"PATO:0002288"}


id: PR:O14114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C31G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.19","synonyms":[{"name":"Spom972h-abo1","type":"exact"}],"termid":"PR:O14114"}


id: GO:0019068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion assembly","secondary_identifiers":["GO:0042963"],"synonyms":[{"name":"bacteriophage assembly","type":"narrow"},{"name":"phage assembly","type":"narrow"},{"name":"viral assembly","type":"exact"},{"name":"viral particle assembly","type":"exact"},{"name":"virion assembly and maintenance","type":"exact"},{"name":"virion organization","type":"exact"},{"name":"virus assembly","type":"exact"},{"name":"virus particle assembly","type":"exact"}],"termid":"GO:0019068"}


id: GO:0021569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 development","termid":"GO:0021569"}


id: GO:1905811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse pruning","termid":"GO:1905807"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse pruning","termid":"GO:1905810"},{"relation_name":"negatively_regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory synapse pruning","synonyms":[{"name":"down regulation of excitatory synapse disassembly","type":"exact"},{"name":"down-regulation of excitatory synapse disassembly","type":"exact"},{"name":"downregulation of excitatory synapse disassembly","type":"exact"},{"name":"inhibition of excitatory synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905811"}


id: GO:0008854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides.","definition_xrefs":["EC:3.1.11.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004527","GO:0140097","GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"exodeoxyribonuclease V activity","secondary_identifiers":["MetaCyc:RXN0-2605"],"synonyms":[{"name":"E. coli exonuclease V","type":"related"},{"name":"E. coli exonuclease V activity","type":"narrow"},{"name":"Escherichia coli exonuclease V","type":"related"},{"name":"RecBC deoxyribonuclease activity","type":"related"},{"name":"exonuclease V activity","type":"related"},{"name":"gene recBC DNase activity","type":"related"},{"name":"gene recBC endoenzyme","type":"related"},{"name":"gene recBCD enzymes","type":"related"}],"termid":"GO:0008854"}


id: PBO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"below 100 amino acid size threshold","termid":"PBO:0000800"}


id: PBO:0113224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL23 trans-acting MAL-activator, MAL21 maltose permease, and MAL22 maltase; on the right arm of Chromosome III, but not in strain S288C; mapped to 95.0 cM on chrIII","termid":"PBO:0113224"}


id: PBO:0084314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylase; targets tri- and dimethylated H3K36; associates with actively transcribed regions and promotes elongation; repressor of autophagy-related genes in nutrient-replete conditions; damage-responsive repressor of PHR1; phosphorylated by the Rad53p-dependent DNA damage checkpoint pathway and by a Rim1p-mediated event during starvation; target of stress-induced hormesis; RPH1 has a paralog, GIS1, that arose from the whole genome duplication","termid":"PBO:0084314"}


id: GO:0051410
data:
  {"annotated_genes":["SJAG_04063","SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84004,98770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03288":null,"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of nitrogen compound","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"detoxification of nitrogenous compound","type":"exact"},{"name":"nitric oxide (NO) detoxification","type":"narrow"}],"termid":"GO:0051410","terms_by_termid":{"GO:0070458":null}}


id: PBO:0053476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 446","termid":"PBO:0053476"}


id: PBO:0050517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D1","termid":"PBO:0050517"}


id: PBO:0034809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC MAGE family subunit Nse3","termid":"PBO:0034809"}


id: PBO:0047461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 2","termid":"PBO:0047461"}


id: PBO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 10","termid":"PBO:0042426"}


id: GO:0019825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oxygen (O2).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oxygen binding","synonyms":[{"name":"cytochrome P450","type":"narrow"},{"name":"cytochrome P450 activity","type":"related"}],"termid":"GO:0019825"}


id: PBO:0114352
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metazoa do not have tef3 due to differenees in the translation machinery","termid":"PBO:0114352"}


id: PBO:0002811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Rna1","termid":"PBO:0002811"}


id: PBO:0029469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucose_binding","termid":"PBO:0029469"}


id: PBO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR3 antisense RNA 1","termid":"PBO:0040679"}


id: PBO:0051815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1","termid":"PBO:0051815"}


id: GO:1902992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:24499793","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"negatively_regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"down regulation of APP catabolic process","type":"exact"},{"name":"down regulation of APP catabolism","type":"exact"},{"name":"down regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of APP catabolic process","type":"exact"},{"name":"down-regulation of APP catabolism","type":"exact"},{"name":"down-regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of APP catabolic process","type":"exact"},{"name":"downregulation of APP catabolism","type":"exact"},{"name":"downregulation of amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of amyloid precursor protein degradation","type":"exact"},{"name":"inhibition of APP catabolic process","type":"narrow"},{"name":"inhibition of APP catabolism","type":"narrow"},{"name":"inhibition of amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of amyloid precursor protein degradation","type":"narrow"},{"name":"negative regulation of APP catabolic process","type":"exact"},{"name":"negative regulation of APP catabolism","type":"exact"},{"name":"negative regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902992"}


id: GO:0021876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","PMID:16226447","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"Notch signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021876"}


id: PBO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPM1","termid":"PBO:0012262"}


id: GO:0036199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholest-4-en-3-one + NADH + H+ + O2 = 26-hydroxycholest-4-en-3-one + NAD+ + H2O. This reaction involves the hydroxylation of the C26 carbon, followed by oxidation of the alcohol to the carboxylic acid via the aldehyde intermediate.","definition_xrefs":["EC:1.14.15.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cholest-4-en-3-one 26-monooxygenase activity","secondary_identifiers":["RHEA:51564","KEGG_REACTION:R09859"],"termid":"GO:0036199"}


id: PBO:0026862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere","termid":"PBO:0026862"}


id: PBO:0077544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 255A","termid":"PBO:0077544"}


id: PBO:0062098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 48 pseudogene","termid":"PBO:0062098"}


id: PBO:0054515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1915","termid":"PBO:0054515"}


id: PBO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenine_import","termid":"PBO:0030841"}


id: PBO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 17","termid":"PBO:0075161"}


id: PBO:0068521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 116, pseudogene","termid":"PBO:0068521"}


id: GO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-vacuole transport vesicle (obsolete GO:0005809)","synonyms":[{"name":"Golgi-vacuole transport vesicle","type":"exact"}],"termid":"GO:0005809"}


id: GO:0050100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylene-3-methylsuccinate = dimethylmaleate.","definition_xrefs":["RHEA:23480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"methylitaconate delta-isomerase activity","secondary_identifiers":["EC:5.3.3.6","MetaCyc:METHYLITACONATE-DELTA-ISOMERASE-RXN","KEGG_REACTION:R03070"],"synonyms":[{"name":"methylitaconate D-isomerase activity","type":"exact"},{"name":"methylitaconate delta2-delta3-isomerase activity","type":"related"},{"name":"methylitaconate isomerase activity","type":"related"}],"termid":"GO:0050100"}


id: PBO:0086498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs","termid":"PBO:0086498"}


id: GO:1990873
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane surrounding the cell tip consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the plasma membrane surrounding the cell tip or some other covalently attached group such as a GPI anchor that is similarly embedded in the plasma membrane surrounding the cell tip.","definition_xrefs":["PMID:20624220"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plasma membrane of cell tip (obsolete GO:1990873)","termid":"GO:1990873"}


id: PBO:0070926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 34","termid":"PBO:0070926"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: GO:0010748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import across plasma membrane","termid":"GO:0010746"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of long-chain fatty acid import into cell","termid":"GO:0140213"},{"relation_name":"negatively_regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"negative regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010748"}


id: GO:0102843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-2-hexadecanoyl-glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a 1-acyl-2-[(7Z)-hexadecenoyl]-glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:46756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"palmitoyl-[glycerolipid] 7-desaturase activity","secondary_identifiers":["EC:1.14.19.42","MetaCyc:RXN-16048"],"synonyms":[{"name":"1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (SN2-16:1 forming)","type":"exact"}],"termid":"GO:0102843"}


id: PBO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 19","termid":"PBO:0071602"}


id: PBO:0111330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mak16","termid":"PBO:0111330"}


id: GO:0018830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-hexachlorocyclohexane + HCl = 1,3(R),4(S),5(S),6(R)-pentachlorocyclohexene.","definition_xrefs":["UM-BBD_enzymeID:e0359"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-hexachlorocyclohexane dehydrochlorinase activity (obsolete GO:0018830)","termid":"GO:0018830"}


id: PBO:0091344
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as caf4, with both caf4 and mdv1 as S. cerevisiae orthologs","termid":"PBO:0091344"}


id: GO:0042173
data:
  {"annotated_genes":["SJAG_04140","SJAG_04853","SJAG_00993","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[87315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore formation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042173","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-R3 methylation (obsolete GO:0043985)","synonyms":[{"name":"histone H4 R3 methylation","type":"exact"},{"name":"histone H4 methylation at R3","type":"exact"},{"name":"histone H4R3me","type":"exact"}],"termid":"GO:0043985"}


id: PBO:0044263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 1 pseudogene 1","termid":"PBO:0044263"}


id: PBO:0082822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear protein that interacts with GTP-Gsp1p; stimulates nucleotide release from Gsp1p; involved in nuclear protein import; nucleotide release is inhibited by Yrb1p","termid":"PBO:0082822"}


id: PBO:0084516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm Y57G7A.10/EMC-2, fly CG17556, human TTC35","termid":"PBO:0084516"}


id: GO:1990646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prolactin stimulus.","definition_xrefs":["PMID:7760850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to prolactin","termid":"GO:1990637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prolactin","termid":"GO:1990646"}


id: PBO:0041024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 9, pseudogene","termid":"PBO:0041024"}


id: GO:2001072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to galactomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteropolysaccharide binding","termid":"GO:0010297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactomannan binding","termid":"GO:2001072"}


id: PBO:0044121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 7, pseudogene","termid":"PBO:0044121"}


id: GO:0052837
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103909],"is_not":false,"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a thiazole, a five-membered heterocyclic ring structure containing a sulfur in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole or thiazole biosynthetic process","termid":"GO:0018131"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"thiazole metabolic process","termid":"GO:0052838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiazole biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiazole anabolism","type":"exact"},{"name":"thiazole biosynthesis","type":"exact"},{"name":"thiazole formation","type":"exact"},{"name":"thiazole synthesis","type":"exact"}],"termid":"GO:0052837","terms_by_termid":{"GO:0052837":null}}


id: FYPO:0001090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"},{"relation_name":"is_a","term_name":"resistance to heat shock","termid":"FYPO:0002045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to heat shock during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to heat shock","type":"exact"},{"name":"resistance to heat shock during mitotic cell cycle","type":"related"},{"name":"resistant to heat shock during vegetative growth","type":"exact"}],"termid":"FYPO:0001090"}


id: GO:0044131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont stops, prevents or reduces its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development of symbiont in host","termid":"GO:0044127"},{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"negatively_regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of development of symbiont in host","termid":"GO:0044131"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: PBO:0063032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein interacting protein 2B","termid":"PBO:0063032"}


id: PBO:0077998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 2","termid":"PBO:0077998"}


id: PBO:0077174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talin 1","termid":"PBO:0077174"}


id: GO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of bud outgrowth involved in lung branching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"},{"relation_name":"negatively_regulates","term_name":"bud outgrowth involved in lung branching","termid":"GO:0060447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bud outgrowth involved in lung branching","termid":"GO:0061112"}


id: PR:Q09859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.05c","secondary_identifiers":["UniProtKB:Q09859"],"synonyms":[{"name":"Spom972h-MSRA","type":"exact"},{"name":"peptide Met(O) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide-methionine (S)-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-methionine-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09859"}


id: PBO:0064448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan like 1","termid":"PBO:0064448"}


id: PBO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase Msp1","termid":"PBO:0034789"}


id: PBO:0057162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320a","termid":"PBO:0057162"}


id: PBO:0055592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3028","termid":"PBO:0055592"}


id: GO:1990516
data:
  {"annotated_genes":["SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94688],"is_not":false,"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"The pathway by which a ribonucleotide is removed from DNA and replaced by a deoxyribonucleotide. The ribonucleotide is incised by RNase H2, and further excised by an endonuclease. The resulting 1 nt gap is then repaired by DNA polymerase and DNA ligase.","definition_xrefs":["PMID:12475934","PMID:22864116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication","termid":"GO:0070716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"ribonucleotide excision repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990516","terms_by_termid":{"GO:1990516":null}}


id: PBO:0041235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 74","termid":"PBO:0041235"}


id: GO:0007462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R1/R6 photoreceptors commit to their cell fate. R1 and R6 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 cell fate commitment","termid":"GO:0007462"}


id: PBO:0040931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 2","termid":"PBO:0040931"}


id: PR:O60081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm72 gene.","definition_xrefs":["UniProtKB:O60081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.07","synonyms":[{"name":"Spom972h-trm72","type":"exact"}],"termid":"PR:O60081"}


id: FYPO:0002133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein-RNA interaction","synonyms":[{"name":"RNA binding abolished","type":"exact"},{"name":"abolished RNA binding","type":"exact"},{"name":"abolished RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002133"}


id: PBO:0030246
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_water_deprivation","termid":"PBO:0030246"}


id: GO:0007518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a myoblast regardless of its environment; upon determination, the cell fate cannot be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate determination","termid":"GO:0007518"}


id: PBO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by temperature","termid":"PBO:0001107"}


id: FYPO:0003044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is abnormal. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal heterochromatin assembly","synonyms":[{"name":"abnormal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003044"}


id: PBO:0045942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B2","termid":"PBO:0045942"}


id: GO:0009985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroflavonol(thiole) lyase activity (obsolete GO:0009985)","synonyms":[{"name":"dihydroflavonol(thiole) lyase activity","type":"exact"}],"termid":"GO:0009985"}


id: GO:0045607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auditory hair cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"regulation of inner ear receptor cell differentiation","termid":"GO:2000980"},{"relation_name":"regulates","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear auditory receptor cell differentiation","synonyms":[{"name":"regulation of auditory hair cell differentiation","type":"exact"},{"name":"regulation of auditory receptor cell differentiation","type":"related"}],"termid":"GO:0045607"}


id: PATO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000728 metabolic function value (obsolete PATO:0000728)","termid":"PATO:0000728"}


id: PBO:0067095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 132, pseudogene","termid":"PBO:0067095"}


id: SO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_junction_loop","synonyms":[{"name":"RNA junction loop","type":"exact"}],"termid":"SO:0000026"}


id: GO:0140413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) + HO3Se-(out) = zinc(in) + HCO3-(in) + HO3Se-(out).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"zinc:bicarbonate symporter activity","termid":"GO:0140412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"zinc:bicarbonate:selenite symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate:selenate symporter activity","type":"exact"}],"termid":"GO:0140413"}


id: PR:Q9UUE0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUE0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0655 protein C17G9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.12c","synonyms":[{"name":"Spom972h-SPBC17G9.12c","type":"exact"}],"termid":"PR:Q9UUE0"}


id: GO:0018072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamic acid residues by the covalent attachment of ethanolamine, itself further modified by the addition of a phosphoglycerol unit.","definition_xrefs":["RESID:AA0170","PMID:2569467"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamyl 5-glycerylphosphorylethanolamine biosynthetic process from peptidyl-glutamic acid (obsolete GO:0018072)","synonyms":[{"name":"peptidyl-L-glutamyl 5-glycerylphosphorylethanolamine anabolism from peptidyl-glutamic acid","type":"exact"},{"name":"peptidyl-L-glutamyl 5-glycerylphosphorylethanolamine formation from peptidyl-glutamic acid","type":"exact"},{"name":"peptidyl-L-glutamyl 5-glycerylphosphorylethanolamine synthesis from peptidyl-glutamic acid","type":"exact"}],"termid":"GO:0018072"}


id: PBO:0076389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 2","termid":"PBO:0076389"}


id: PBO:0062670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 1 pseudogene","termid":"PBO:0062670"}


id: CL:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.","definition_xrefs":["CARO:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell","termid":"CL:0000000"}


id: GO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate proteoglycan binding","synonyms":[{"name":"heparin proteoglycan binding","type":"related"}],"termid":"GO:0043395"}


id: PBO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 30, pseudogene","termid":"PBO:0070073"}


id: GO:0015931
data:
  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id: GO:0090714
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["GOC:add","PMID:26086132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: PBO:0077634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 2","termid":"PBO:0077634"}


id: GO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1) binding to viral RNA.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MDA-5 signaling pathway","synonyms":[{"name":"regulation of IFIH1 signaling pathway","type":"exact"},{"name":"regulation of MDA-5 signalling pathway","type":"exact"},{"name":"regulation of MDA5 signaling pathway","type":"exact"},{"name":"regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039533"}


id: GO:1904612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2,3,7,8-tetrachlorodibenzodioxine stimulus.","definition_xrefs":["PMID:23196670","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2,3,7,8-tetrachlorodibenzodioxine","synonyms":[{"name":"response to TCDD","type":"exact"},{"name":"response to dioxin","type":"exact"}],"termid":"GO:1904612"}


id: PBO:0110028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 10","termid":"PBO:0110028"}


id: PBO:0027098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_rDNA_replication_origins","termid":"PBO:0027098"}


id: GO:0103113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glucosyl-oleandomycin + ATP + H2O = glucosyl-oleandomycin + ADP + hydrogenphosphate + H+.","definition_xrefs":["EC:3.6.3.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosyl-oleandomycin-exporting ATPase activity (obsolete GO:0103113)","secondary_identifiers":["MetaCyc:TRANS-RXN-220"],"termid":"GO:0103113"}


id: PBO:0027685
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_branched,_curved,_elongated_cell","termid":"PBO:0027685"}


id: PBO:0070510
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 9","termid":"PBO:0070510"}


id: GO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ems","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vulval development","synonyms":[{"name":"activation of vulval development","type":"related"},{"name":"stimulation of vulval development","type":"related"},{"name":"up regulation of vulval development","type":"related"},{"name":"up-regulation of vulval development","type":"related"},{"name":"upregulation of vulval development","type":"related"}],"termid":"GO:0040026"}


id: PBO:0066995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 298","termid":"PBO:0066995"}


id: GO:0019513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, catalyzed by the enzyme glucoside 3-dehydrogenase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose catabolic process, using glucoside 3-dehydrogenase","secondary_identifiers":["MetaCyc:LACTOSEUTIL-PWY"],"synonyms":[{"name":"lactose breakdown, using glucoside 3-dehydrogenase","type":"exact"},{"name":"lactose degradation, using glucoside 3-dehydrogenase","type":"exact"}],"termid":"GO:0019513"}


id: PBO:0068240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 2","termid":"PBO:0068240"}


id: GO:0120230
data:
  {"annotated_genes":["SJAG_03751","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85073,89455],"is_not":false,"summary":null,"term":"GO:0120230"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a recombinase.","definition_xrefs":["GOC:mah","PMID:32414915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"recombinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120230","terms_by_termid":{"GO:0120230":null}}


id: SO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing. This is less energetically favourable than watson crick base pairing. Hoogsteen GC base pairs only have two hydrogen bonds.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hoogsteen_base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Hoogsteen_base_pair"],"synonyms":[{"name":"Hoogsteen base pair","type":"exact"}],"termid":"SO:0000500"}


id: GO:0047606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (S)-hydroxynitrile = hydrogen cyanide + an aldehyde or ketone.","definition_xrefs":["EC:4.1.2.47","PMID:3377504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(S)-hydroxynitrile lyase activity","secondary_identifiers":["GO:0046991"],"synonyms":[{"name":"alpha-hydroxynitrile lyase activity","type":"narrow"},{"name":"hydroxynitrilase activity","type":"broad"},{"name":"hydroxynitrile lyase activity","type":"exact"},{"name":"oxynitrilase activity","type":"related"}],"termid":"GO:0047606"}


id: PBO:0086105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of respiratory complex III; mitochondrial inner membrane protein; required for an early step in assembly of respiratory complex III (cytochrome bc1 complex); mRNA is targeted to mitochondria","termid":"PBO:0086105"}


id: PBO:0059717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 25","termid":"PBO:0059717"}


id: GO:1901418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"positively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to ethanol","synonyms":[{"name":"activation of response to ethanol","type":"narrow"},{"name":"up regulation of response to ethanol","type":"exact"},{"name":"up-regulation of response to ethanol","type":"exact"},{"name":"upregulation of response to ethanol","type":"exact"}],"termid":"GO:1901418"}


id: PBO:0046162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 2","termid":"PBO:0046162"}


id: PBO:0053091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2C","termid":"PBO:0053091"}


id: GO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature development in camera-type eye","synonyms":[{"name":"retinal vasculature development","type":"exact"}],"termid":"GO:0061298"}


id: PBO:0052565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 2","termid":"PBO:0052565"}


id: PBO:0074631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 25B","termid":"PBO:0074631"}


id: PBO:0068526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 125, pseudogene","termid":"PBO:0068526"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:25902521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: PBO:0049542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 6","termid":"PBO:0049542"}


id: PBO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1 antisense RNA 1","termid":"PBO:0052050"}


id: PBO:0063435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 9","termid":"PBO:0063435"}


id: PBO:0057081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR181A2 host gene","termid":"PBO:0057081"}


id: PBO:0029383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trichostatin_A","termid":"PBO:0029383"}


id: GO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with hepatocyte growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0038023","GO:0003824","GO:0140096","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"hepatocyte growth factor receptor activity","synonyms":[{"name":"HGF receptor activity","type":"exact"},{"name":"HGF-activated receptor activity","type":"exact"},{"name":"hepatocyte growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005008"}


id: PBO:0048603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 4 homolog","termid":"PBO:0048603"}


id: PBO:0086506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication","termid":"PBO:0086506"}


id: GO:0072587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of ATP-hydrolyzing DNA topoisomerase. DNA topoisomerase (ATP-hydrolyzing) regulator activity catalyzes a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase activator activity","termid":"GO:0001671"},{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0001671"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0001671","GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activator activity","termid":"GO:0072587"}


id: GO:1903131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a mononuclear cell.","definition_xrefs":["GOC:TermGenie","CL:0000842","PMID:24759906","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell differentiation","termid":"GO:1903131"}


id: PBO:0073915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 5","termid":"PBO:0073915"}


id: PBO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"krr family protein (predicted)","termid":"PBO:0000564"}


id: PBO:0056220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C3","termid":"PBO:0056220"}


id: PBO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-51","termid":"PBO:0051413"}


id: GO:0007429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Sprouting of secondary branches in an open tracheal system. These form from the tips of primary branches and are formed by individual cells that roll up into unicellular tubes. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:29844090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary branching, open tracheal system","synonyms":[{"name":"secondary tracheal branching","type":"exact"}],"termid":"GO:0007429"}


id: PBO:0073759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 13","termid":"PBO:0073759"}


id: PBO:0090956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30, Rpp1","termid":"PBO:0090956"}


id: GO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex which is involved in the repair of DNA double-strand breaks and, in mammals, V(D)J recombination events. It consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer Ku, the nuclear phosphoprotein XRCC4 or a homolog thereof, and DNA ligase IV.","definition_xrefs":["PMID:12235392","PMID:17072889","PMID:10854421","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"DNA-dependent protein kinase-DNA ligase 4 complex","secondary_identifiers":["GO:0005959"],"termid":"GO:0005958"}


id: PBO:0090646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Slx9","termid":"PBO:0090646"}


id: PBO:0036476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor","termid":"PBO:0036476"}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: PBO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_CCCP","termid":"PBO:0030704"}


id: GO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which double-stranded small interfering RNA (ds siRNA) molecules are converted to single-stranded small interfering RNA (ss siRNA).","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA (obsolete GO:0036404)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA","type":"related"}],"termid":"GO:0036404"}


id: GO:0007149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete colony morphology (obsolete GO:0007149)","synonyms":[{"name":"colony morphology","type":"exact"}],"termid":"GO:0007149"}


id: PBO:0041016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 3","termid":"PBO:0041016"}


id: PBO:0060950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, interleukin 3 regulated","termid":"PBO:0060950"}


id: PBO:0059215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRNIP divergent transcript","termid":"PBO:0059215"}


id: PBO:0030225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus_during_salt_stress","termid":"PBO:0030225"}


id: PBO:0077179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 3","termid":"PBO:0077179"}


id: GO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of cytomatrix proteins to form complexes in the cell cortex beneath the active zone, i.e. just beneath the presynaptic plasma membrane.","definition_xrefs":["GOC:dh","GOC:jid","GOC:ef","PMID:12812759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoskeletal matrix organization at active zone","synonyms":[{"name":"cytoskeletal matrix organisation at active zone","type":"exact"}],"termid":"GO:0048789"}


id: PBO:0082608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0082608"}


id: PBO:0044941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0044941"}


id: GO:1904325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["PMID:15937517","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"positively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"activation of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"positive regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"upregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904325"}


id: PBO:0016588
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SIT4","termid":"PBO:0016588"}


id: PBO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-absent_during","termid":"PBO:0012829"}


id: PBO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 15","termid":"PBO:0044129"}


id: PR:O60159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H(+)/Cl(-) exchange transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03444","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anion/proton exchange transporter C19C7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.11","secondary_identifiers":["UniProtKB:O60159"],"synonyms":[{"name":"Spom972h-CLCN3","type":"exact"}],"termid":"PR:O60159"}


id: PBO:0031224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_spindle_microtubules_to_kinetochore_involved_in_homologous_chromosome_segregation","termid":"PBO:0031224"}


id: GO:0010968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization","termid":"GO:0031113"},{"relation_name":"regulates","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of microtubule nucleation","termid":"GO:0010968"}


id: PBO:0043312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 1","termid":"PBO:0043312"}


id: GO:0045115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"regulation of beta 2 integrin anabolism","type":"exact"},{"name":"regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"regulation of beta 2 integrin formation","type":"exact"},{"name":"regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045115"}


id: PBO:0059874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 11","termid":"PBO:0059874"}


id: PBO:0051859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 5","termid":"PBO:0051859"}


id: GO:0033662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alternation by a symbiont of the levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host defense-related protein level (obsolete GO:0033662)","termid":"GO:0033662"}


id: GO:0044065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"},{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory system process","termid":"GO:0044065"}


id: PBO:0061983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 2","termid":"PBO:0061983"}


id: PATO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001096 absolute force value (obsolete PATO:0001096)","termid":"PATO:0001096"}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: PBO:0085983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085983"}


id: PBO:0081810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 3, Y-linked","termid":"PBO:0081810"}


id: PBO:0060260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin expression factor 2","termid":"PBO:0060260"}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: PBO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_meiotic_spindle","termid":"PBO:0031485"}


id: PBO:0041546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 putative open reading frame 15","termid":"PBO:0041546"}


id: PBO:0067914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 216","termid":"PBO:0067914"}


id: GO:1990197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ATP-binding cassette (ABC) transporter complex that is capable of methionine-importing activity. An example is the bacterial MetNIQ methionine transporter, that consists of the dimeric ATPase subunit MetN located at the cytoplasmic side of the plasma membrane and the dimeric transmembrane subunit MetI. MetQ is regarded as the periplasmic methionine-binding chaperon subunit, and is capable of transporting methionine from the periplasm into the cytoplasm in an ATP-dependent manner.","definition_xrefs":["GOC:bhm","PMID:22095702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"},{"relation_name":"is_a","term_name":"methionine-importing complex","termid":"GO:1902509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"methionine-importing ABC transporter complex","synonyms":[{"name":"ATP-binding cassette (ABC) methionine importer complex","type":"exact"},{"name":"ATP-dependent methionine importer complex","type":"exact"},{"name":"ATP-dependent methionine importing complex","type":"exact"},{"name":"ATP-dependent methionine-importing complex","type":"exact"},{"name":"MetNI complex","type":"narrow"},{"name":"MetNI transport complex","type":"narrow"},{"name":"MetNI transporter","type":"related"},{"name":"MetNI transporter complex","type":"narrow"},{"name":"MetNIQ complex","type":"narrow"},{"name":"MetNIQ transport complex","type":"narrow"},{"name":"MetNIQ transporter","type":"related"},{"name":"MetNIQ transporter complex","type":"related"},{"name":"methionine transport complex","type":"broad"},{"name":"methionine transporter","type":"related"},{"name":"methionine transporter complex","type":"broad"},{"name":"methionine transporter complex, ATP-dependent","type":"broad"}],"termid":"GO:1990197"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: PBO:0085093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor, exportin; major karyopherin involved in export of proteins, RNAs, and ribosomal subunits from the nucleus","termid":"PBO:0085093"}


id: FYPO:0001014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal membrane organization during nitrogen starvation","synonyms":[{"name":"abnormal cellular membrane organization during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organisation during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organization during nitrogen depletion","type":"exact"},{"name":"abnormal membrane organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001014"}


id: PBO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 29","termid":"PBO:0070658"}


id: PBO:0045267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 like","termid":"PBO:0045267"}


id: PBO:0057170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 323a","termid":"PBO:0057170"}


id: PBO:0076458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAL bHLH transcription factor 1, erythroid differentiation factor","termid":"PBO:0076458"}


id: PBO:0051186
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id: PBO:0078118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 7","termid":"PBO:0078118"}


id: PBO:0110036
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG20L2 pseudogene 1","termid":"PBO:0110036"}


id: PBO:0043543
data:
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id: GO:0001591
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id: GO:0052700
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id: GO:1905319
data:
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id: PBO:0066271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member E","termid":"PBO:0066271"}


id: PBO:0012058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, possibly DNAJ","termid":"PBO:0012058"}


id: PBO:0086821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR187C is not an essential gene","termid":"PBO:0086821"}


id: GO:0043933
data:
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id: GO:0045672
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of osteoclast differentiation","termid":"GO:0045670"},{"relation_name":"positively_regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast differentiation","synonyms":[{"name":"activation of osteoclast differentiation","type":"narrow"},{"name":"stimulation of osteoclast differentiation","type":"narrow"},{"name":"up regulation of osteoclast differentiation","type":"exact"},{"name":"up-regulation of osteoclast differentiation","type":"exact"},{"name":"upregulation of osteoclast differentiation","type":"exact"}],"termid":"GO:0045672"}


id: PBO:0026693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caesium","termid":"PBO:0026693"}


id: PBO:0069626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 903, pseudogene","termid":"PBO:0069626"}


id: GO:0034281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-isokaurene + diphosphate.","definition_xrefs":["PMID:17141283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ent-isokaurene synthase activity","termid":"GO:0034281"}


id: PBO:0086740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partially overlaps verified gene YAK1/YJL141C but does not share all phenotypes; null mutant displays increased levels of spontaneous Rad52p foci, increased sporulation efficiency, and small defect in vacuolar fragmentation","termid":"PBO:0086740"}


id: PBO:0061224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein with MIF4G domain 1","termid":"PBO:0061224"}


id: SO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where an inversion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_breakpoint","synonyms":[{"name":"inversion breakpoint","type":"exact"}],"termid":"SO:0001022"}


id: FYPO:0003250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins earlier than normal, e.g. before metaphase is complete.","definition_xrefs":["PomBase:mah","PMID:23394829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"premature septum assembly","synonyms":[{"name":"advanced septum assembly","type":"exact"},{"name":"ectopic metaphase septum assembly","type":"related"},{"name":"premature division septum assembly","type":"exact"},{"name":"premature division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"premature septation","type":"broad"},{"name":"premature septum assembly during mitotic cell cycle","type":"related"},{"name":"premature septum assembly during vegetative growth","type":"exact"},{"name":"premature septum formation","type":"related"}],"termid":"FYPO:0003250"}


id: GO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the plasma kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinin cascade","termid":"GO:0002257"},{"relation_name":"is_a","term_name":"regulation of plasma kallikrein-kinin cascade","termid":"GO:0002529"},{"relation_name":"negatively_regulates","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma kallikrein-kinin cascade","synonyms":[{"name":"down regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"down-regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"downregulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"inhibition of plasma kallikrein-kinin cascade","type":"narrow"}],"termid":"GO:0002549"}


id: GO:0009495
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin-like 2Fe-2S ferredoxin (obsolete GO:0009495)","synonyms":[{"name":"thioredoxin-like 2Fe-2S ferredoxin","type":"exact"}],"termid":"GO:0009495"}


id: PBO:0073017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthesis of cytochrome C oxidase 1","termid":"PBO:0073017"}


id: PBO:0036150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0036150"}


id: PATO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001041 relative amplitude (obsolete PATO:0001041)","termid":"PATO:0001041"}


id: PBO:0048154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1 pseudogene 1","termid":"PBO:0048154"}


id: FYPO:0006384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of endocytosis is decreased when the cell is subject to nitrogen starvation. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of endocytosis during nitrogen starvation","synonyms":[{"name":"decreased rate of actin-mediated endocytosis during nitrogen starvation","type":"exact"},{"name":"decreased rate of endocytosis during nitrogen depletion","type":"exact"},{"name":"decreased rate of endocytosis during nitrogen deprivation","type":"exact"},{"name":"decreased rate of protein internalization during nitrogen starvation","type":"narrow"},{"name":"reduced rate of endocytosis during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006384"}


id: GO:0120258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine to form peptidyl-O-acetyl-L-threonine.","definition_xrefs":["PMID:16728640","RESID:AA0423","PMID:22802624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"},{"relation_name":"is_a","term_name":"peptidyl-threonine acetylation","termid":"GO:0120257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine O-acetylation","secondary_identifiers":["RESID:AA0364"],"termid":"GO:0120258"}


id: PBO:0057680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1269b","termid":"PBO:0057680"}


id: GO:0030036
data:
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process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"actin filament-based 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id: PBO:0079240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 13","termid":"PBO:0079240"}


id: PBO:0064946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEAK1 related, kinase-activating pseudokinase 1","termid":"PBO:0064946"}


id: PBO:0040903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 7","termid":"PBO:0040903"}


id: GO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:12905029","GOC:add","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte clearance","synonyms":[{"name":"regulation of RBC clearance","type":"exact"},{"name":"regulation of neocytolysis","type":"narrow"},{"name":"regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034106"}


id: GO:1904223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucuronosyltransferase activity.","definition_xrefs":["GOC:rl","GO_REF:0000059","GOC:TermGenie","GOC:BHF","PMID:20610558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glucuronosyltransferase activity","synonyms":[{"name":"regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"regulation of GT activity","type":"exact"},{"name":"regulation of PNP-UDPGT","type":"related"},{"name":"regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDPGA transferase activity","type":"exact"},{"name":"regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDPGT activity","type":"exact"},{"name":"regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of pnp-UDPGT activity","type":"narrow"},{"name":"regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"}],"termid":"GO:1904223"}


id: PBO:0057135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR217 host gene","termid":"PBO:0057135"}


id: PBO:0004346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein (predicted)","termid":"PBO:0004346"}


id: PATO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000168 relative time (obsolete PATO:0000168)","termid":"PATO:0000168"}


id: GO:0071408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloalkane stimulus. A cycloalkane is a cyclic saturated hydrocarbon having the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cycloalkane","termid":"GO:0014071"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cycloalkane","termid":"GO:0071408"}


id: FYECO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which biotin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ biotin","termid":"FYECO:0000191"}


id: GO:1903666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asexual reproduction","synonyms":[{"name":"activation of asexual reproduction","type":"narrow"},{"name":"up regulation of asexual reproduction","type":"exact"},{"name":"up-regulation of asexual reproduction","type":"exact"},{"name":"upregulation of asexual reproduction","type":"exact"}],"termid":"GO:1903666"}


id: GO:1901356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-D-galactofuranose.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"beta-D-galactofuranose metabolic process","synonyms":[{"name":"beta-D-galactofuranose metabolism","type":"exact"}],"termid":"GO:1901356"}


id: GO:1901971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901971)","termid":"GO:1901971"}


id: PBO:0038562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3 binding protein","termid":"PBO:0038562"}


id: PBO:0040936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 7","termid":"PBO:0040936"}


id: PBO:0040513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 2","termid":"PBO:0040513"}


id: PBO:0058462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5191","termid":"PBO:0058462"}


id: GO:1990029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmical contraction and relaxation of arterioles, observed as slow and fast waves, with frequencies of 1-2 and 10-20 cpm.","definition_xrefs":["PMID:14993429","PMID:15678091","PMID:1932763","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasomotion","termid":"GO:1990029"}


id: GO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:19318610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"priming of cellular response to stress","synonyms":[{"name":"priming of response to stress","type":"broad"},{"name":"priming of stress response","type":"broad"}],"termid":"GO:0080136"}


id: GO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a heterodimer of the bHLH-ZIP proteins Myc and Max.","definition_xrefs":["PMID:20170194","PMID:16620027","PMID:16620031","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Myc-Max complex","termid":"GO:0071943"}


id: SO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The last base to be translated into protein. It does not include the stop codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_end","synonyms":[{"name":"coding end","type":"exact"},{"name":"translation termination site","type":"exact"},{"name":"translation_end","type":"exact"}],"termid":"SO:0000327"}


id: PBO:0057050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 137","termid":"PBO:0057050"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: PBO:0053960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1267","termid":"PBO:0053960"}


id: PR:Q9UUD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prp38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.08","synonyms":[{"name":"Spom972h-prp38","type":"exact"}],"termid":"PR:Q9UUD2"}


id: FYPO:0003716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the nucleus instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to nucleus","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to nucleus","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to nucleus","type":"exact"}],"termid":"FYPO:0003716"}


id: PBO:0044785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEF6 guanine nucleotide exchange factor","termid":"PBO:0044785"}


id: PR:O13776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ftp105 gene.","definition_xrefs":["UniProtKB:O13776","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp5-interacting protein ftp105 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.16","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Hid-1 family protein ftp105 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ftp105","type":"exact"}],"termid":"PR:O13776"}


id: FYPO:0006411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which the levels of RNAs that encode histones, which normally vary over the course of the mitotic cell cycle, remain constant. All RNAs encoding histones, or one or more specific histone RNA, may be affected.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA level oscillation during mitotic cell cycle","termid":"FYPO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abolished histone RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abolished histone RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abolished histone RNA level oscillation during vegetative growth","type":"related"},{"name":"abolished histone mRNA level oscillation during mitotic cell cycle","type":"exact"},{"name":"abolished histone transcript level oscillation during mitotic cell cycle","type":"exact"},{"name":"abolished periodic expression of histone RNA during mitotic cell cycle","type":"exact"},{"name":"histone RNA level oscillation abolished during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006411"}


id: PBO:0081700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 622","termid":"PBO:0081700"}


id: PBO:0065804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1C, member RAS oncogene family pseudogene","termid":"PBO:0065804"}


id: RO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_movement_of","termid":"RO:0002565"}


id: PBO:0063512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1 pseudogene 1","termid":"PBO:0063512"}


id: SO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The constant region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"C_region","synonyms":[{"name":"C region","type":"exact"}],"termid":"SO:0001834"}


id: GO:0032238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of adenosine, adenine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"adenosine transport","termid":"GO:0032238"}


id: GO:1990851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing a secreted Wnt protein associated with its receptor, Frizzled (Fz), and co-receptor low density lipoprotein receptor-related protein 5 (LRP5) or LRP6.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:11448771","PMID:20093360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Wnt-Frizzled-LRP5/6 complex","synonyms":[{"name":"Frizzled-LRP5/6 complex","type":"related"},{"name":"Fz/Wnt/LRP6 complex","type":"narrow"},{"name":"WNT-FZD-LRP5 complex","type":"narrow"},{"name":"WNT-FZD-LRP6 complex","type":"narrow"},{"name":"Wnt receptor complex","type":"broad"},{"name":"Wnt-FZD-LRP5/6 trimeric complex","type":"exact"},{"name":"Wnt-induced Frizzled-LRP5/6 complex","type":"related"},{"name":"Wnt.Fz.LRP ternary complex","type":"exact"}],"termid":"GO:1990851"}


id: GO:0016180
data:
  {"annotated_genes":["SJAG_00566","SJAG_03257","SJAG_00083","SJAG_01234","SJAG_01798","SJAG_04321","SJAG_04754","SJAG_01176","SJAG_03572","SJAG_04586","SJAG_03179","SJAG_00088","SJAG_04084","SJAG_02993","SJAG_04818","SJAG_00854","SJAG_04527","SJAG_01958","SJAG_00559","SJAG_04286","SJAG_04824","SJAG_01521","SJAG_04153","SJAG_00081","SJAG_01191","SJAG_02156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87221,104563,112563],"is_not":false,"summary":null,"term":"GO:0016180"},{"annotations":[91759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[111958,100372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[110805,86598,91925,102755,97717,102817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[114806,100949,101793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[98724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[92490,72939,93826,89653,84968,98725,100950,101794,114807,98638,103000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[101795,114808,86564,100951,95511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[90297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule. The primary function of snRNAs is processing pre-messenger RNA in the nucleus. They have also been shown to aid in the regulation of transcription factors (7SK RNA) or RNA polymerase II (B2 RNA), and maintaining the telomeres.","definition_xrefs":["PMID:15196465","PMID:31815536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNA maturation","type":"exact"},{"name":"snRNA production","type":"exact"}],"termid":"GO:0016180","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0120049":null}}


id: PATO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal,","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepal-like","termid":"PATO:0002459"}


id: GO:1904750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["PMID:24415760","GOC:BHF","GOC:nc","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleolus","synonyms":[{"name":"down regulation of protein localisation in nucleolus","type":"exact"},{"name":"down regulation of protein localisation to nucleolus","type":"exact"},{"name":"down regulation of protein localization in nucleolus","type":"exact"},{"name":"down regulation of protein localization to nucleolus","type":"exact"},{"name":"down-regulation of protein localisation in nucleolus","type":"exact"},{"name":"down-regulation of protein localisation to nucleolus","type":"exact"},{"name":"down-regulation of protein localization in nucleolus","type":"exact"},{"name":"down-regulation of protein localization to nucleolus","type":"exact"},{"name":"downregulation of protein localisation in nucleolus","type":"exact"},{"name":"downregulation of protein localisation to nucleolus","type":"exact"},{"name":"downregulation of protein localization in nucleolus","type":"exact"},{"name":"downregulation of protein localization to nucleolus","type":"exact"},{"name":"inhibition of protein localisation in nucleolus","type":"narrow"},{"name":"inhibition of protein localisation to nucleolus","type":"narrow"},{"name":"inhibition of protein localization in nucleolus","type":"narrow"},{"name":"inhibition of protein localization to nucleolus","type":"narrow"},{"name":"negative regulation of protein localisation in nucleolus","type":"exact"},{"name":"negative regulation of protein localisation to nucleolus","type":"exact"},{"name":"negative regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904750"}


id: GO:0022839
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105900,92552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens in response to a specific ion stimulus.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"monoatomic ion-gated channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ion gated channel activity","type":"broad"},{"name":"monoatomic ion gated channel activity","type":"exact"}],"termid":"GO:0022839","terms_by_termid":{"GO:0005227":null}}


id: PBO:0004511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Apl1 (predicted)","termid":"PBO:0004511"}


id: GO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor cell","termid":"GO:0071228"}


id: GO:0050910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of sound vibration in which the vibration is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of sound","termid":"GO:0007605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of sound","secondary_identifiers":["GO:0055128","GO:0009592"],"synonyms":[{"name":"detection of sound","type":"exact"},{"name":"hearing, sensory transduction of sound","type":"exact"},{"name":"perception of sound, detection of mechanical stimulus","type":"exact"},{"name":"perception of sound, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of sound, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of sound","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of sound","type":"exact"},{"name":"sensory transduction of sound","type":"exact"}],"termid":"GO:0050910"}


id: GO:0032929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide anion generation","termid":"GO:0032928"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of superoxide anion generation","synonyms":[{"name":"down regulation of superoxide release","type":"exact"},{"name":"down-regulation of superoxide release","type":"exact"},{"name":"downregulation of superoxide release","type":"exact"},{"name":"inhibition of superoxide release","type":"narrow"},{"name":"negative regulation of superoxide release","type":"exact"}],"termid":"GO:0032929"}


id: PBO:0056365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 2","termid":"PBO:0056365"}


id: PBO:0090170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf12","termid":"PBO:0090170"}


id: GO:1990518
data:
  {"annotated_genes":["SJAG_02822","SJAG_04210","SJAG_00857","SJAG_00884"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102960,103783,105616,111796],"is_not":false,"summary":null,"term":"GO:1990518"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of the DNA helix in the direction 3' to 5'.","definition_xrefs":["PMID:25165823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA helicase activity","termid":"GO:0017116"},{"relation_name":"is_a","term_name":"3'-5' DNA helicase activity","termid":"GO:0043138"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_02822":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"single-stranded 3'-5' DNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990518","terms_by_termid":{"GO:1990518":null}}


id: PBO:0065867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB24, member RAS oncogene family","termid":"PBO:0065867"}


id: PBO:0074453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 1","termid":"PBO:0074453"}


id: MOD:00780
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-acetyl-L-asparagine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-asparagine","synonyms":[{"name":"AcAsn","type":"exact"}],"termid":"MOD:00780"}


id: MOD:01171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-acetyl-L-threonine.","definition_xrefs":["PubMed:16728640","RESID:AA0423","Unimod:1#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-3-(acetyloxy)-2-aminobutanoic acid","type":"exact"},{"name":"ACT_SITE O-acetylthreonine intermediate","type":"exact"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylthreonine","type":"exact"},{"name":"O-acetyl-L-threonine","type":"exact"},{"name":"O-acetylthreonine","type":"exact"},{"name":"OAcThr","type":"exact"},{"name":"threonine acetate ester","type":"exact"}],"termid":"MOD:01171"}


id: PBO:0027231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_stationary_phase","termid":"PBO:0027231"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: PBO:0086120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; has a role in nuclear import in association with Pse1p; also plays a role in the cell cycle and the DNA damage response; contains HEAT-repeats","termid":"PBO:0086120"}


id: GO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["PMID:15207821","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"},{"relation_name":"is_a","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002361"}


id: SO:1000021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from T to A.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_to_A_transversion","synonyms":[{"name":"T to A transversion","type":"exact"}],"termid":"SO:1000021"}


id: GO:1990157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC bound to the DNA-bound DNA replication initiation protein DnaA. Essential for DNA replication initiation.","definition_xrefs":["PMID:20129058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"DnaA-DnaB-DnaC complex","termid":"GO:1990157"}


id: GO:1904263
data:
  {"annotated_genes":["SJAG_03371","SJAG_04496","SJAG_02231","SJAG_05184","SJAG_02424","SJAG_00209","SJAG_04910","SJAG_02605","SJAG_03405","SJAG_00561","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84614,84902,86006,90893,92668,94574,103683,105795,107062,109376,114866],"is_not":false,"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25366275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"positively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC1 signal transduction","type":"narrow"},{"name":"activation of TORC1 signaling","type":"narrow"},{"name":"positive regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signal transduction","type":"exact"},{"name":"up regulation of TORC1 signaling","type":"exact"},{"name":"up-regulation of TORC1 signal transduction","type":"exact"},{"name":"up-regulation of TORC1 signaling","type":"exact"},{"name":"upregulation of TORC1 signal transduction","type":"exact"},{"name":"upregulation of TORC1 signaling","type":"exact"}],"termid":"GO:1904263","terms_by_termid":{"GO:1904263":null}}


id: FYPO:0004322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a smaller portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PomBase:mah","PomBase:vw","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"decreased extent of CENP-A containing nucleosome","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of CENP-A deposition","type":"related"},{"name":"decreased spatial extent of CENP-A loading","type":"related"},{"name":"decreased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"decreased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced spatial extent of CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0004322"}


id: PBO:0073572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 5","termid":"PBO:0073572"}


id: GO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"myelin maintenance","synonyms":[{"name":"myelin sheath maintenance","type":"exact"}],"termid":"GO:0043217"}


id: GO:0120232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in prenyl-FMNH2, an essential cofactor for the decarboxylase enzymes UbiD and Fdc1.","definition_xrefs":["PMID:26083743","PMID:26083754","GOC:krc","PMID:25647642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"prenyl-FMNH2 biosynthetic process","synonyms":[{"name":"prenyl-FMNH2 anabolism","type":"exact"},{"name":"prenyl-FMNH2 biosynthesis","type":"exact"},{"name":"prenyl-FMNH2 formation","type":"exact"},{"name":"prenyl-FMNH2 synthesis","type":"exact"},{"name":"prenylated FMNH2 anabolism","type":"exact"},{"name":"prenylated FMNH2 biosynthesis","type":"exact"},{"name":"prenylated FMNH2 biosynthetic process","type":"exact"},{"name":"prenylated FMNH2 formation","type":"exact"},{"name":"prenylated FMNH2 synthesis","type":"exact"}],"termid":"GO:0120232"}


id: PBO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase","termid":"PBO:0061566"}


id: PBO:0051410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-44","termid":"PBO:0051410"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_00381","SJAG_02406","SJAG_03362","SJAG_04866","SJAG_03538","SJAG_01970","SJAG_02421","SJAG_04067","SJAG_00827","SJAG_04282","SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90865,96087,103908,110099,110105,110518,112530],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[85623,110192],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[106970,106971,96090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: PomGeneEx:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at levels, or produced at rates, that vary under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluctuates","synonyms":[{"name":"gene expression fluctuates","type":"exact"},{"name":"gene product level fluctuates","type":"exact"}],"termid":"PomGeneEx:0000008"}


id: PBO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rei1 (predicted)","termid":"PBO:0034807"}


id: GO:0050408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [pyruvate kinase] phosphate + H2O = [pyruvate kinase] + phosphate.","definition_xrefs":["EC:3.1.3.49","MetaCyc:PYRUVATE-KINASE-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0004721","GO:0003674","GO:0016788","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"[pyruvate kinase]-phosphatase activity","synonyms":[{"name":"ATP:pyruvate 2-O-phosphotransferase-phosphate phosphohydrolase activity","type":"related"},{"name":"pyruvate kinase phosphatase activity","type":"related"},{"name":"pyruvate kinase-phosphatase activity","type":"related"}],"termid":"GO:0050408"}


id: GO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of achromobactin, a citrate siderophore, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:10928541","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"achromobactin transport","termid":"GO:0042935"}


id: GO:0047443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 4-hydroxy-4-methyl-2-oxoglutarate = 2 pyruvate, and 2-hydroxy-4-oxobutane-1,2,4-tricarboxylate = oxaloacetate + pyruvate.","definition_xrefs":["EC:4.1.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4-hydroxy-4-methyl-2-oxoglutarate aldolase activity","secondary_identifiers":["MetaCyc:4.1.3.17-RXN"],"synonyms":[{"name":"4-hydroxy-4-methyl-2-ketoglutarate aldolase activity","type":"related"},{"name":"4-hydroxy-4-methyl-2-oxoglutarate pyruvate-lyase (pyruvate-forming)","type":"related"},{"name":"4-hydroxy-4-methyl-2-oxoglutarate pyruvate-lyase activity","type":"related"},{"name":"gamma-methyl-gamma-hydroxy-alpha-ketoglutaric aldolase activity","type":"related"},{"name":"pyruvate aldolase activity","type":"related"}],"termid":"GO:0047443"}


id: GO:0033366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to secretory granule","synonyms":[{"name":"protein localisation in secretory granule","type":"exact"},{"name":"protein localization in secretory granule","type":"exact"}],"termid":"GO:0033366"}


id: PBO:0030343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_MCM_complex_assembly","termid":"PBO:0030343"}


id: MOD:01008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyl (phenylmethyl) group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}


id: PBO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P3","termid":"PBO:0047832"}


id: GO:1904391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ciliary neurotrophic factor stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16914133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ciliary neurotrophic factor","termid":"GO:1904391"}


id: GO:1905059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000061","PMID:20678993","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"ATP phosphohydrolase (Ca2+-transporting) involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"ATPase-coupled calcium ion transmembrane transporter activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"Ca(2+)-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-pumping ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ABC transporter involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium efflux ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-translocating P-type ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"plasma membrane Ca-ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"sarco(endo)plasmic reticulum Ca2+-ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"sarcoplasmic reticulum ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"}],"termid":"GO:1905059"}


id: FYPO:0003630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is abolished. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["PomBase:mah","GO:0071004","GO:1903241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abolished U2-type prespliceosome assembly","synonyms":[{"name":"U2-type prespliceosome assembly abolished","type":"exact"},{"name":"abolished U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2-type prespliceosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0003630"}


id: PBO:0042996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint with forkhead and ring finger domains","termid":"PBO:0042996"}


id: PBO:0051099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-2","termid":"PBO:0051099"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["UniPathway:UPA00802","GOC:yaf","PMID:11387982","GOC:TermGenie","MetaCyc:PWY-5943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


