# terms

id: PATO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having only one phase or stage.","definition_xrefs":["hefreedictionary.com:hefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monophasic","termid":"PATO:0001773"}


id: GO:1990280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:dos","GOC:mah","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization to chromatin","synonyms":[{"name":"RNA localisation to chromatin","type":"exact"}],"termid":"GO:1990280"}


id: GO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"},{"relation_name":"part_of","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"}


id: GO:0099021
data:
  {"annotated_genes":["SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89660],"is_not":false,"summary":null,"term":"GO:0099021"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the cortical endoplasmic reticulum.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"cortical endoplasmic reticulum","termid":"GO:0032541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cortical endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099021","terms_by_termid":{"GO:0099021":null}}


id: GO:0047031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diethyl (2R,3R)-2-methyl-3-hydroxysuccinate + NADP+ = diethyl 2-methyl-3-oxosuccinate + H+ + NADPH.","definition_xrefs":["RHEA:21008","EC:1.1.1.229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diethyl 2-methyl-3-oxosuccinate reductase activity","secondary_identifiers":["MetaCyc:1.1.1.229-RXN","KEGG_REACTION:R04387"],"synonyms":[{"name":"diethyl-(2R,3R)-2-methyl-3-hydroxysuccinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047031"}


id: PBO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin B Six Uptake","termid":"PBO:0002111"}


id: GO:1905169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagosome","type":"exact"},{"name":"regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905169"}


id: PBO:0052852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-8","termid":"PBO:0052852"}


id: PBO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family, drebrin ortholog Abp1","termid":"PBO:0002905"}


id: GO:0031137
data:
  {"annotated_genes":["SJAG_02426","SJAG_00975","SJAG_03346","SJAG_04206","SJAG_00117","SJAG_02923","SJAG_00256","SJAG_03309","SJAG_00781","SJAG_02066","SJAG_04509","SJAG_03486","SJAG_01794","SJAG_02444","SJAG_03501","SJAG_03340","SJAG_05153","SJAG_01084","SJAG_03081","SJAG_00993","SJAG_04009","SJAG_04682","SJAG_00600","SJAG_02773","SJAG_00210","SJAG_04813","SJAG_01718","SJAG_03623","SJAG_01699","SJAG_01919","SJAG_04312","SJAG_02785","SJAG_02730","SJAG_00514","SJAG_00526","SJAG_01401","SJAG_02472","SJAG_01509","SJAG_02379","SJAG_02233","SJAG_03048","SJAG_01254","SJAG_04394","SJAG_06638","SJAG_02266","SJAG_01311","SJAG_03453","SJAG_00664","SJAG_05000","SJAG_01754","SJAG_02380","SJAG_03802","SJAG_00145","SJAG_03067","SJAG_01113","SJAG_00472","SJAG_03735","SJAG_00990","SJAG_02723","SJAG_01345","SJAG_02592","SJAG_04026","SJAG_02921","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86456,87434,90049,102906],"is_not":false,"summary":null,"term":"GO:0031137"},{"annotations":[94993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[112095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[96064,84619,85797,112653,112994,114727,105330,115583,112096,115584,103581,102801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[88663,89784,101438,98174,113073,98914,85397,84795,92956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031138"},{"annotations":[91726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[112042,103023,98401,90802,97092,102433,101041,110982,84796,102340,103375,112581,89499,105540,87987,90942,103178],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[89893],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[88762,92946,93617,102804,89894,85819],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[84731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[112786,84732,87429,96012,107898,98309,95128,96680,101440,103670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031139"},{"annotations":[96065,115587,115588,103583,105331,97938,84443,112787,97049,105100,100985,99909],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[87430,84486,90048,86454,107890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[112098,107891,102907,87435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00145":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01401":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01794":null,"SJAG_01919":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04509":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031137","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0031137":null,"GO:0031138":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null,"GO:0140538":null,"GO:1900237":null,"GO:1902917":null}}


id: SO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An indel that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indel_artifact","synonyms":[{"name":"indel artifact","type":"exact"}],"termid":"SO:0002173"}


id: PBO:0049957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 3","termid":"PBO:0049957"}


id: MOD:00844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled residue","termid":"MOD:00844"}


id: GO:0036063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cone-shaped structure in the head of a spermatozoon, which is formed by the coalescence of Golgi fragments following the completion of meiosis. The acroblast is situated adjacent to the acrosomal vesicle.","definition_xrefs":["PMID:19934220","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"acroblast","synonyms":[{"name":"spermatid acroblast","type":"exact"}],"termid":"GO:0036063"}


id: GO:0160110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumens of the A and B tubules of the axonemal microtuble doublet that helps stabilize the doublet microtubule.","definition_xrefs":["GOC:krc","PMID:29430673","PMID:37295417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}


id: GO:0160078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipid droplet fusion.","definition_xrefs":["PMID:36477540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"negatively_regulates","term_name":"lipid droplet fusion","termid":"GO:0160077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid droplet fusion","termid":"GO:0160078"}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_03123","SJAG_00218","SJAG_05001","SJAG_04483","SJAG_02222","SJAG_01288","SJAG_03587","SJAG_04771","SJAG_03705","SJAG_04668","SJAG_02192","SJAG_04462","SJAG_05285","SJAG_01453","SJAG_00876","SJAG_01171","SJAG_00610","SJAG_03646","SJAG_04666","SJAG_01290","SJAG_01787","SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[105830,102627,88163,112329,88174,109675,84660,104306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[99191,105139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[98497,104595,91672,98496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[88996,84115],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[99393,101871,88998,87356,88980,114412],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0076318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin 2","termid":"PBO:0076318"}


id: GO:0140679
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108864],"is_not":false,"summary":null,"term":"GO:0140679"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na(in) = ADP + phosphate + Na(out).","definition_xrefs":["PMID:9106203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.4","TC:3.A.1.115.1"],"termid":"GO:0140679","terms_by_termid":{"GO:0140679":null}}


id: GO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome.","definition_xrefs":["PMID:10358769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"phagocytic cup","termid":"GO:0001891"}


id: PBO:0091295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase","termid":"PBO:0091295"}


id: PBO:0029452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest,_elongated_cell","termid":"PBO:0029452"}


id: MOD:01288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:255#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +28","termid":"MOD:00578"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28 - site H","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:01288"}


id: PBO:0041013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bactericidal permeability increasing protein","termid":"PBO:0041013"}


id: PBO:0085808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encoded within an intron of the mitochondrial COX1 gene; translational initiation codon is predicted to be ATA rather than ATG","termid":"PBO:0085808"}


id: GO:0048471
data:
  {"annotated_genes":["SJAG_03750","SJAG_03162","SJAG_03145","SJAG_00825","SJAG_04400","SJAG_03609","SJAG_04059","SJAG_04578","SJAG_04883","SJAG_01227","SJAG_01722","SJAG_03281","SJAG_01785","SJAG_02723","SJAG_03943","SJAG_01527","SJAG_02532","SJAG_04049","SJAG_00784","SJAG_01329","SJAG_01422","SJAG_01664","SJAG_00355","SJAG_00790","SJAG_02683","SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89738,93118,97259,103172,105589],"is_not":false,"summary":null,"term":"GO:0048471"},{"annotations":[85062,90814,85354,104726,106982,90239,103923,110431,110695,108582,110912,115376,106440],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097038"},{"annotations":[89666],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099020"},{"annotations":[83971,112112,102854,95228,94370,97152,91287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"Cytoplasm situated near, or occurring around, the nucleus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00784":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01527":null,"SJAG_01664":null,"SJAG_01722":null,"SJAG_01785":null,"SJAG_02532":null,"SJAG_02683":null,"SJAG_02723":null,"SJAG_03145":null,"SJAG_03162":null,"SJAG_03281":null,"SJAG_03609":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04400":null,"SJAG_04578":null,"SJAG_04583":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"perinuclear region of cytoplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048471","terms_by_termid":{"GO:0048471":null,"GO:0097038":null,"GO:0099020":null,"GO:1990578":null}}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: GO:0071878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor protein signaling pathway activity. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106072"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"negative regulation of adrenergic receptor signaling pathway","type":"exact"},{"name":"negative regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071878"}


id: PBO:0040269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM serine/threonine kinase","termid":"PBO:0040269"}


id: FYPO:0006451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased methylated histone binding","synonyms":[{"name":"reduced methylated histone binding","type":"exact"}],"termid":"FYPO:0006451"}


id: GO:0010009
data:
  {"annotated_genes":["SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87161],"is_not":false,"summary":null,"term":"GO:0010009"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"external leaflet of endosome membrane","type":"exact"},{"name":"external side of endosome membrane","type":"exact"}],"termid":"GO:0010009","terms_by_termid":{"GO:0010009":null}}


id: GO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NADP+ = 2-oxoglutarate + L-glutamine + H+ + NADPH. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + NADP+ + H2O = NH3 + 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.4.1.13","RHEA:15501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutamate synthase (NADPH) activity","secondary_identifiers":["MetaCyc:GLUTAMATESYN-RXN","KEGG_REACTION:R00114"],"synonyms":[{"name":"GOGAT activity","type":"broad"},{"name":"L-glutamate synthase activity","type":"broad"},{"name":"L-glutamate synthetase activity","type":"broad"},{"name":"L-glutamate:NADP+ oxidoreductase (transaminating)","type":"related"},{"name":"L-glutamine:2-oxoglutarate aminotransferase, NADPH oxidizing activity","type":"related"},{"name":"NADPH GOGAT","type":"exact"},{"name":"NADPH-dependent glutamate synthase activity","type":"related"},{"name":"NADPH-glutamate synthase activity","type":"related"},{"name":"NADPH-linked glutamate synthase","type":"related"},{"name":"glutamate (reduced nicotinamide adenine dinucleotide phosphate) synthase activity","type":"related"},{"name":"glutamate synthetase (NADP) activity","type":"related"},{"name":"glutamine amide-2-oxoglutarate aminotransferase (oxidoreductase, NADP) activity","type":"related"},{"name":"glutamine-ketoglutaric aminotransferase activity","type":"related"}],"termid":"GO:0004355"}


id: FYPO:0002979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to MMS","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002979"}


id: GO:0016763
data:
  {"annotated_genes":["SJAG_06634","SJAG_03775","SJAG_04354","SJAG_04713","SJAG_03167","SJAG_04709","SJAG_01661","SJAG_04747","SJAG_00827","SJAG_03881","SJAG_01359","SJAG_03708","SJAG_06284","SJAG_01859","SJAG_00683","SJAG_00694","SJAG_05228","SJAG_01974"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90112,90330],"is_not":false,"summary":null,"term":"GO:0016763"},{"annotations":[90110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[94376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004044"},{"annotations":[100932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004048"},{"annotations":[91321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003879"},{"annotations":[103910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160205"},{"annotations":[90328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[90329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[106938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000107"},{"annotations":[112614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050144"},{"annotations":[108440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004588"},{"annotations":[87654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004731"},{"annotations":[86364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"},{"annotations":[93601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043399"},{"annotations":[92367,86267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008479"},{"annotations":[88545,85041,111430,84063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004845"},{"annotations":[90331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_00694":null,"SJAG_00827":null,"SJAG_01359":null,"SJAG_01661":null,"SJAG_01859":null,"SJAG_01974":null,"SJAG_03167":null,"SJAG_03708":null,"SJAG_03775":null,"SJAG_03881":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04747":null,"SJAG_05228":null,"SJAG_06284":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"pentosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-112266","EC:2.4.2.-","Reactome:R-HSA-112265"],"synonyms":[{"name":"transferase activity, transferring pentosyl groups","type":"exact"}],"termid":"GO:0016763","terms_by_termid":{"GO:0000107":null,"GO:0000310":null,"GO:0003879":null,"GO:0003999":null,"GO:0004044":null,"GO:0004048":null,"GO:0004422":null,"GO:0004588":null,"GO:0004731":null,"GO:0004845":null,"GO:0008479":null,"GO:0016763":null,"GO:0017061":null,"GO:0043399":null,"GO:0050144":null,"GO:0052657":null,"GO:0160205":null}}


id: PBO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc25","termid":"PBO:0018178"}


id: PATO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced to","synonyms":[{"name":"mislocalised to","type":"related"}],"termid":"PATO:0002168"}


id: PR:O43080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 38, NatC auxiliary subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.03c","synonyms":[{"name":"N-terminal acetyltransferase C complex subunit naa38 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-naa38","type":"exact"}],"termid":"PR:O43080"}


id: PBO:0085573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein interacting with Arl3p; Arl3p is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi; putative ortholog of human SCOCO","termid":"PBO:0085573"}


id: PBO:0062257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 13","termid":"PBO:0062257"}


id: GO:0046176
data:
  {"annotated_genes":["SJAG_00633","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94757,108100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aldonic acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aldonic acid breakdown","type":"exact"},{"name":"aldonic acid catabolism","type":"exact"},{"name":"aldonic acid degradation","type":"exact"}],"termid":"GO:0046176","terms_by_termid":{"GO:0046177":null}}


id: PBO:0080213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villin 1","termid":"PBO:0080213"}


id: GO:1903088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which 5-amino-1-ribofuranosylimidazole-4-carboxamide is transported across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:24778186","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"5-amino-1-ribofuranosylimidazole-4-carboxamide transmembrane transport","termid":"GO:1903088"}


id: PBO:0086193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to the human peptidyl-tRNA hydrolase gene ICT1; associates with mitochondrial large subunit; may function in translation termination; YOL114C is not an essential gene","termid":"PBO:0086193"}


id: PBO:0082788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (Translocase of Outer Membrane) complex; responsible for initial import of mitochondrially directed proteins; mediates interaction between TOM and TIM complexes and acts as receptor for precursor proteins; implicated in mitochondrial accumulation of amyloid β (Aβ) peptides via direct interaction with Aβ peptide residues 25-42 followed by transfer to Tom40p and transport through the TOM channel","termid":"PBO:0082788"}


id: PBO:0090586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR89 family","termid":"PBO:0090586"}


id: FYPO:0004600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal transcriptional response to pheromone","synonyms":[{"name":"normal regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004600"}


id: PBO:0003235
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diamond Blackfan Anemia","termid":"PBO:0003235"}


id: GO:0060266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"negative regulation of respiratory burst","termid":"GO:0060268"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"negatively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"negative regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060266"}


id: PBO:0076346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 13","termid":"PBO:0076346"}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: GO:0046538
data:
  {"annotated_genes":["SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91585],"is_not":false,"summary":null,"term":"GO:0046538"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction mechanism uses 2,3-bisphosphoglycerate as a phosphate donor.","definition_xrefs":["EC:5.4.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglycerate mutase activity","termid":"GO:0004619"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01516","MetaCyc:RXN-15513"],"synonyms":[{"name":"glycerate phosphomutase (diphosphoglycerate cofactor) activity","type":"related"}],"termid":"GO:0046538","terms_by_termid":{"GO:0046538":null}}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: GO:0100062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that positively_regulates SREBP signaling pathway.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100062)","termid":"GO:0100062"}


id: PBO:0071052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 54","termid":"PBO:0071052"}


id: GO:0033262
data:
  {"annotated_genes":["SJAG_01210","SJAG_03160","SJAG_03048","SJAG_03695","SJAG_00364","SJAG_01068","SJAG_02074","SJAG_03720","SJAG_04671","SJAG_03438","SJAG_02162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105416,113361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[98919,105417,94340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[108560,99866,113783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[85646,98925,103147,112745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[95927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA replication during S phase","type":"related"},{"name":"regulation of DNA replication involved in S phase","type":"exact"},{"name":"regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:0033262","terms_by_termid":{"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0075853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX2IP pseudogene 1","termid":"PBO:0075853"}


id: PBO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member B","termid":"PBO:0047246"}


id: GO:0004303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estradiol-17-beta + NAD(P)+ = estrone + NAD(P)H + H+. The activity can use NAD+ or NADP+ as the acceptor.","definition_xrefs":["EC:1.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"estradiol 17-beta-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Reactome:R-HSA-8862137","Reactome:R-HSA-5693390","MetaCyc:ESTRADIOL-17-BETA-DEHYDROGENASE-RXN","Reactome:R-HSA-5696822","Reactome:R-HSA-6810594","Reactome:R-HSA-804969"],"synonyms":[{"name":"17-beta-HSD activity","type":"broad"},{"name":"17-beta-estradiol dehydrogenase activity","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"17beta,20alpha-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"17beta-HSD","type":"related"},{"name":"17beta-estradiol dehydrogenase activity","type":"related"},{"name":"17beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"20alpha-hydroxysteroid dehydrogenase","type":"broad"},{"name":"estradiol 17-beta-dehydrogenase activity","type":"related"},{"name":"estradiol 17beta-dehydrogenase activity","type":"related"},{"name":"estradiol dehydrogenase activity","type":"related"},{"name":"estradiol-17beta:NAD(P)+ 17-oxidoreductase activity","type":"related"},{"name":"estrogen 17-oxidoreductase activity","type":"related"}],"termid":"GO:0004303"}


id: PBO:0080688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt ligand secretion mediator","termid":"PBO:0080688"}


id: GO:0090104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic epsilon cell. A pancreatic epsilon cell is a cell in the pancreas that secretes ghrelin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic epsilon cell differentiation","synonyms":[{"name":"pancreatic E cell differentiation","type":"exact"}],"termid":"GO:0090104"}


id: GO:0061573
data:
  {"annotated_genes":["SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112688],"is_not":false,"summary":null,"term":"GO:0061573"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the arrangement of actin filament bundles from the periphery toward the interior of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin filament bundle retrograde transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament cable retrograde transport","type":"related"}],"termid":"GO:0061573","terms_by_termid":{"GO:0061573":null}}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["RESID:AA0393","PubMed:2345152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: PBO:0057074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 153-2","termid":"PBO:0057074"}


id: PBO:0082108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory subunit of DNA polymerase zeta; involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev3p, Pol31p and Pol32p","termid":"PBO:0082108"}


id: PBO:0027417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth","termid":"PBO:0027417"}


id: PBO:0053785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1036","termid":"PBO:0053785"}


id: GO:1902296
data:
  {"annotated_genes":["SJAG_02667","SJAG_05197","SJAG_01823","SJAG_02199","SJAG_00729","SJAG_04190","SJAG_02908","SJAG_00884","SJAG_00272","SJAG_00874","SJAG_04877","SJAG_02818","SJAG_03780","SJAG_01010","SJAG_00863","SJAG_00814","SJAG_01762","SJAG_04879","SJAG_04210","SJAG_02182","SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90532,99373,109667,101458,108793,86160,106473,111918,109031,111787,91838,103513,111617,103776,100766,110076,91626,91804,103879,105635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[91806,114684,100770,99375,105637,101460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[103514,100771,101461,103881,86161,91839,90534,91807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication elongation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA strand elongation during DNA replication involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902296","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0066173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 6","termid":"PBO:0066173"}


id: GO:2001040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to drug","termid":"GO:2001025"},{"relation_name":"is_a","term_name":"regulation of cellular response to drug","termid":"GO:2001038"},{"relation_name":"positively_regulates","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to drug","termid":"GO:2001040"}


id: PBO:0088415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex, cyclin-dependent protein kinase subunit Srb10","termid":"PBO:0088415"}


id: GO:0018508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+ = catechol + CO2 + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase activity (obsolete GO:0018508)","synonyms":[{"name":"benzoate cis-diol dehydrogenase activity","type":"exact"}],"termid":"GO:0018508"}


id: PBO:0057731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1306","termid":"PBO:0057731"}


id: PBO:0047078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member G, pseudogene","termid":"PBO:0047078"}


id: FYPO:0006388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which meiotic spindle pole body organization is abnormal during the first meiotic nuclear division. Meiotic spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the meiotic spindle pole body (SPB).","definition_xrefs":["GO:1990395","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body organization during meiosis I","synonyms":[{"name":"abnormal meiotic SPB organization during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body organisation during meiosis I","type":"exact"},{"name":"abnormal spindle pole body organization during meiosis I","type":"exact"}],"termid":"FYPO:0006388"}


id: PR:Q9UTL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol-glycan biosynthesis class W protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01933","PANTHER:PTHR20661:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored wall transfer protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.10c","secondary_identifiers":["UniProtKB:Q9UTL4"],"synonyms":[{"name":"Spom972h-PIGW","type":"exact"},{"name":"meiotically up-regulated gene 59 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL4"}


id: PBO:0065311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 33","termid":"PBO:0065311"}


id: GO:0004458
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108295],"is_not":false,"summary":null,"term":"GO:0004458"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + 2 [Fe(III)cytochrome c] = 2 [Fe(II)cytochrome c] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:13521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-lactate dehydrogenase (cytochrome) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.1.2.4"],"synonyms":[{"name":"(R)-lactate:ferricytochrome-c 2-oxidoreductase activity","type":"exact"},{"name":"D-(-)-lactic cytochrome c reductase activity","type":"related"},{"name":"D-lactate (cytochrome) dehydrogenase activity","type":"related"},{"name":"D-lactate ferricytochrome c oxidoreductase activity","type":"related"},{"name":"D-lactate-cytochrome c reductase activity","type":"related"},{"name":"cytochrome-dependent D-(-)-lactate dehydrogenase activity","type":"related"},{"name":"lactic acid dehydrogenase activity","type":"broad"}],"termid":"GO:0004458","terms_by_termid":{"GO:0004458":null}}


id: PBO:0012044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase","termid":"PBO:0012044"}


id: PBO:0071163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 2","termid":"PBO:0071163"}


id: PR:O94328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbl1 gene.","definition_xrefs":["UniProtKB:O94328","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 118 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.12","synonyms":[{"name":"Spom972h-nbl1","type":"exact"}],"termid":"PR:O94328"}


id: PBO:0069630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 907, pseudogene","termid":"PBO:0069630"}


id: SO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exonic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splicing_silencer","synonyms":[{"name":"ESS","type":"exact"},{"name":"exonic splicing silencer","type":"exact"}],"termid":"SO:0002058"}


id: PBO:0076425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 1 (pseudogene)","termid":"PBO:0076425"}


id: PBO:0057359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ac","termid":"PBO:0057359"}


id: PBO:0113527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions; prevents growth inhibition by activation of calcineurin in presence of elevated concentrations of calcium; targeted to vacuole via AP-3 pathway; similar to mammalian PMCA1a","termid":"PBO:0113527"}


id: PBO:0081672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 594","termid":"PBO:0081672"}


id: PBO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26 (predicted)","termid":"PBO:0003805"}


id: PBO:0051117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-2 (pseudogene)","termid":"PBO:0051117"}


id: GO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"regulation of (PG)H synthase activity","type":"related"},{"name":"regulation of PG synthetase activity","type":"related"},{"name":"regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060584"}


id: PBO:0074743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 103","termid":"PBO:0074743"}


id: PBO:0017672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion channel Cch1","termid":"PBO:0017672"}


id: PBO:0038729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 24","termid":"PBO:0038729"}


id: GO:0006459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binding unfolded ER proteins (obsolete GO:0006459)","synonyms":[{"name":"binding unfolded ER proteins","type":"exact"}],"termid":"GO:0006459"}


id: PBO:0066557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 20","termid":"PBO:0066557"}


id: GO:0102168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenazine-1-carboxylate + S-adenosyl-L-methionine = 5-methyl-phenazine-1-carboxylate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:49112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"5-methyl-phenazine-1-carboxylate N-methyltransferase activity","secondary_identifiers":["EC:2.1.1.327","MetaCyc:RXN-11897"],"termid":"GO:0102168"}


id: GO:0018134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0240"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine oxazolecarboxylic acid (obsolete GO:0018134)","termid":"GO:0018134"}


id: GO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"modulation of VIP receptor activity in other organism","type":"exact"},{"name":"modulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"},{"name":"regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044517"}


id: PBO:0028801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding","termid":"PBO:0028801"}


id: GO:1905203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of connective tissue replacement.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:25590961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"connective tissue replacement","termid":"GO:0097709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of connective tissue replacement","termid":"GO:1905203"}


id: PBO:0018006
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc6 does not bind directly to Pcn1 (PCNA)","termid":"PBO:0018006"}


id: GO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal movement of mRNA from the nucleus to the cytoplasm of the host cell, leading to shutoff of host protein expression. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA export from nucleus","secondary_identifiers":["VZ:902"],"synonyms":[{"name":"inhibition by virus of host mRNA nuclear export","type":"narrow"},{"name":"inhibition of host mRNA nuclear export by virus","type":"narrow"},{"name":"negative regulation by virus of host mRNA nuclear export","type":"broad"},{"name":"suppression by virus of host mRNA export from nucleus","type":"narrow"},{"name":"suppression of host mRNA nuclear export by virus","type":"narrow"}],"termid":"GO:0039522"}


id: PBO:0055355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2784","termid":"PBO:0055355"}


id: GO:0030656
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110192,85623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0030656","terms_by_termid":{"GO:0090180":null}}


id: PBO:0065220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 3","termid":"PBO:0065220"}


id: PBO:0044605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 11","termid":"PBO:0044605"}


id: SO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a nucleic acid molecule which controls its own replication through the interaction of specific proteins at one or more origins of replication.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosome"],"termid":"SO:0000340"}


id: GO:0160068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pollen tube guidance towards ovules. This is one mechanism to prevent polytuby, the simultaneous penetration of ovules by multiple pollen tubes.","definition_xrefs":["PMID:33790463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis","termid":"GO:0050928"},{"relation_name":"negatively_regulates","term_name":"pollen tube guidance","termid":"GO:0010183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pollen tube guidance","synonyms":[{"name":"prevention of polytuby","type":"broad"}],"termid":"GO:0160068"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: PBO:0078921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 10-1","termid":"PBO:0078921"}


id: PBO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 7","termid":"PBO:0052104"}


id: PBO:0113450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113450"}


id: PBO:0071283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 6","termid":"PBO:0071283"}


id: SO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U5 RNA is a component of both types of known spliceosome. The precise function of this molecule is unknown, though it is known that the 5' loop is required for splice site selection and p220 binding, and that both the 3' stem-loop and the Sm site are important for Sm protein binding and cap methylation.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U5_snRNA"],"synonyms":[{"name":"U5 small nuclear RNA","type":"exact"},{"name":"U5 snRNA","type":"exact"},{"name":"small nuclear RNA U5","type":"exact"},{"name":"snRNA U5","type":"exact"}],"termid":"SO:0000395"}


id: PBO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p14.2)","termid":"PBO:0047896"}


id: GO:0010686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracyclic triterpenoid metabolic process","termid":"GO:0010685"},{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetracyclic triterpenoid biosynthetic process","synonyms":[{"name":"tetracyclic triterpenoid biosynthesis","type":"exact"}],"termid":"GO:0010686"}


id: PBO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 2","termid":"PBO:0047517"}


id: PBO:0078855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 3","termid":"PBO:0078855"}


id: GO:1904245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polynucleotide adenylyltransferase activity.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:19460348","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polynucleotide adenylyltransferase activity","synonyms":[{"name":"regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of NTP polymerase activity","type":"exact"},{"name":"regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"regulation of RNA formation factors, PF1","type":"related"},{"name":"regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"regulation of poly(A) hydrolase activity","type":"exact"},{"name":"regulation of poly(A) polymerase activity","type":"exact"},{"name":"regulation of poly(A) synthetase activity","type":"exact"},{"name":"regulation of poly-A polymerase activity","type":"exact"},{"name":"regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of polyadenylate polymerase activity","type":"exact"},{"name":"regulation of polyadenylate synthetase activity","type":"exact"},{"name":"regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"regulation of polyadenylic polymerase activity","type":"exact"},{"name":"regulation of terminal riboadenylate transferase activity","type":"exact"}],"termid":"GO:1904245"}


id: PBO:0057797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3119-2","termid":"PBO:0057797"}


id: GO:0006743
data:
  {"annotated_genes":["SJAG_06603","SJAG_01672","SJAG_01866","SJAG_01668","SJAG_00933","SJAG_01820","SJAG_00459","SJAG_04223","SJAG_00721","SJAG_04000","SJAG_04568","SJAG_01865","SJAG_04642","SJAG_01043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111727,115606],"is_not":false,"summary":null,"term":"GO:0006743"},{"annotations":[85776],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[110257,105807,111380,113603,94962,88402,115607,86219,115608,88397,99782,84303,104693,112371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[104694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquinone metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"coenzyme Q metabolic process","type":"exact"},{"name":"coenzyme Q metabolism","type":"exact"},{"name":"ubiquinone metabolism","type":"exact"}],"termid":"GO:0006743","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0032194":null,"GO:1904775":null}}


id: FYPO:0005041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0005041"}


id: PATO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000121 relative height (obsolete PATO:0000121)","termid":"PATO:0000121"}


id: PBO:0034231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shares_ancestor_with","termid":"PBO:0034231"}


id: GO:0022628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The large subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid large ribosomal subunit","termid":"GO:0000311"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast large ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal LSU complex","type":"exact"},{"name":"chloroplast ribosomal large subunit complex","type":"exact"}],"termid":"GO:0022628"}


id: PBO:0091587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1","termid":"PBO:0091587"}


id: PBO:0078690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-3","termid":"PBO:0078690"}


id: GO:0015922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aspartate + O2 = iminosuccinate + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate oxidase activity (obsolete GO:0015922)","termid":"GO:0015922"}


id: GO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uracil.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"uracil binding","termid":"GO:0002058"}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: PBO:0003145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L8 (predicted)","termid":"PBO:0003145"}


id: GO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD + H2O = AMP + FMN.","definition_xrefs":["RHEA:13889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"FAD diphosphatase activity","secondary_identifiers":["MetaCyc:FAD-PYROPHOSPHATASE-RXN","EC:3.6.1.18"],"synonyms":[{"name":"FAD nucleotidohydrolase activity","type":"related"},{"name":"FAD pyrophosphatase activity","type":"exact"},{"name":"FAD pyrophosphohydrolase activity","type":"exact"},{"name":"flavin adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"flavine adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"riboflavin adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"riboflavine adenine dinucleotide pyrophosphatase activity","type":"related"}],"termid":"GO:0047884"}


id: GO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.159-RXN","EC:2.4.1.159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside L-rhamnosyltransferase activity","secondary_identifiers":["RHEA:22528"],"synonyms":[{"name":"UDP-L-rhamnose:flavonol-3-O-D-glucoside 6''-O-L-rhamnosyltransferase activity","type":"related"},{"name":"UDP-rhamnose:flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"},{"name":"uridine diphosphorhamnose-flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"}],"termid":"GO:0047230"}


id: GO:0006987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of a specific protein, possessing protein kinase and endoribonuclease activities, to an active form as a result of signaling via the unfolded protein response.","definition_xrefs":["GOC:tb","PMID:12042763","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of signaling protein activity involved in unfolded protein response (obsolete GO:0006987)","synonyms":[{"name":"unfolded protein response, activation of signaling protein activity","type":"exact"},{"name":"unfolded protein response, activation of signaling protein kinase/endonuclease","type":"exact"},{"name":"unfolded protein response, activation of signalling protein kinase/endonuclease","type":"exact"}],"termid":"GO:0006987"}


id: PBO:0083381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex","termid":"PBO:0083381"}


id: GO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein involved in an antiviral response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete antiviral response protein activity (obsolete GO:0003800)","synonyms":[{"name":"antiviral response protein activity","type":"exact"}],"termid":"GO:0003800"}


id: PBO:0073273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 9","termid":"PBO:0073273"}


id: FYPO:0006018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer nuclear pore complexes than normal.","definition_xrefs":["PMID:28242692","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased nuclear pore density","synonyms":[{"name":"decreased NPC density","type":"exact"},{"name":"decreased nuclear pore complex density","type":"exact"},{"name":"decreased nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"decreased nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in decreased number","type":"exact"},{"name":"nuclear pores present in decreased number","type":"exact"},{"name":"reduced nuclear pore density","type":"exact"}],"termid":"FYPO:0006018"}


id: PBO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 38","termid":"PBO:0047399"}


id: GO:0018938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.","definition_xrefs":["UM-BBD_pathwayID:npp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-nitropropane metabolic process","secondary_identifiers":["MetaCyc:PWY-723"],"synonyms":[{"name":"2-nitropropane metabolism","type":"exact"}],"termid":"GO:0018938"}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: PBO:0073543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 1","termid":"PBO:0073543"}


id: PBO:0035741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_neddylation_during_vegetative_growth","termid":"PBO:0035741"}


id: PR:P50998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada1 gene.","definition_xrefs":["UniProtKB:P50998","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.04","synonyms":[{"name":"Spom972h-ada1","type":"exact"},{"name":"myoadenylate deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50998"}


id: PBO:0067764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 64","termid":"PBO:0067764"}


id: PBO:0041580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 15","termid":"PBO:0041580"}


id: PBO:0038570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase","termid":"PBO:0038570"}


id: PBO:0048275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 11","termid":"PBO:0048275"}


id: GO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"female meiosis chromosome segregation","termid":"GO:0016321"}


id: PBO:0069169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 421, pseudogene","termid":"PBO:0069169"}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: GO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + ergosterol = UDP + O-glucosyl-ergosterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ergosterol UDP-glucosyltransferase activity (obsolete GO:0051506)","termid":"GO:0051506"}


id: PBO:0069848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1134, pseudogene","termid":"PBO:0069848"}


id: PBO:0085620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; required for meiotic crossing over; forms a complex with Rec102p and Spo11p necessary during the initiation of recombination","termid":"PBO:0085620"}


id: PBO:0029904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_localization_phenotype","termid":"PBO:0029904"}


id: PBO:0068835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 73, pseudogene","termid":"PBO:0068835"}


id: GO:0160054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of microfibril.","definition_xrefs":["PMID:32855533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microfibril assembly","termid":"GO:0160054"}


id: PBO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter Thi9","termid":"PBO:0001002"}


id: PBO:0058656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6784","termid":"PBO:0058656"}


id: GO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading messenger RNA (mRNA) within the mitochondrion.","definition_xrefs":["GOC:ans","PMID:19864255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"},{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA surveillance","synonyms":[{"name":"mitochondrial aberrant RNA catabolic process","type":"exact"},{"name":"mitochondrial mRNA quality control","type":"exact"},{"name":"mitochondrial messenger RNA surveillance","type":"exact"}],"termid":"GO:0035946"}


id: GO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["CL:0000333","PMID:17076275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neural crest cell delamination","synonyms":[{"name":"neural crest cell emigration","type":"exact"},{"name":"neural crest cell individualization","type":"exact"},{"name":"neural crest cell segregation","type":"related"}],"termid":"GO:0036032"}


id: GO:0015917
data:
  {"annotated_genes":["SJAG_04370","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104050],"is_not":false,"summary":null,"term":"GO:0015917"},{"annotations":[68113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The directed movement of aminophospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"aminophospholipid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015917","terms_by_termid":{"GO:0015917":null,"GO:0140331":null}}


id: PBO:0064589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTEH antisense RNA 1","termid":"PBO:0064589"}


id: PBO:0080146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 2","termid":"PBO:0080146"}


id: PBO:0077605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11G, pseudogene","termid":"PBO:0077605"}


id: GO:0009129
data:
  {"annotated_genes":["SJAG_03708","SJAG_00533","SJAG_04713","SJAG_00197","SJAG_03771","SJAG_00964","SJAG_00444","SJAG_04627","SJAG_03164","SJAG_04487","SJAG_04354","SJAG_04709","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89987,108438,86037,113230,95070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[67448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[85962,104905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[95558,104906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[88543,111426,89543,84062,85040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine nucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009129","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: PBO:0067438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 559, pseudogene","termid":"PBO:0067438"}


id: GO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rhamnose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to rhamnose","termid":"GO:0032149"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rhamnose stimulus","synonyms":[{"name":"cellular response to L-rhamnose stimulus","type":"narrow"}],"termid":"GO:0071334"}


id: PBO:0041966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 9","termid":"PBO:0041966"}


id: PR:Q09746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-BAR and double SH3 domains protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein BZZ1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.05c","secondary_identifiers":["UniProtKB:Q09746"],"synonyms":[{"name":"SPBC12C2.05c","type":"related"},{"name":"Spom972h-FCHSD1","type":"exact"}],"termid":"PR:Q09746"}


id: PBO:0078276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-4","termid":"PBO:0078276"}


id: PBO:0031712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_transport","termid":"PBO:0031712"}


id: PBO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase","termid":"PBO:0045340"}


id: GO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast-type ferredoxin (obsolete GO:0009494)","synonyms":[{"name":"chloroplast-type ferredoxin","type":"exact"}],"termid":"GO:0009494"}


id: PBO:0054281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1672","termid":"PBO:0054281"}


id: GO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + ethanolamine phosphate = S-adenosyl-L-homocysteine + N-methylethanolamine phosphate.","definition_xrefs":["EC:2.1.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"phosphoethanolamine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02037","KEGG_REACTION:R06868"],"synonyms":[{"name":"S-adenosyl-L-methionine:ethanolamine-phosphate N-methyltransferase activity","type":"related"},{"name":"phosphoethanolamine methyltransferase activity","type":"related"}],"termid":"GO:0000234"}


id: GO:0008253
data:
  {"annotated_genes":["SJAG_03096","SJAG_02580","SJAG_01055","SJAG_02593","SJAG_02959","SJAG_02582"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84183,84184,87133,90931,110217,110218],"is_not":false,"summary":null,"term":"GO:0008253"},{"annotations":[113686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050484"},{"annotations":[105032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-109278","Reactome:R-HSA-5694126","RHEA:12484","Reactome:R-HSA-109415","Reactome:R-HSA-109380","Reactome:R-HSA-109449","Reactome:R-HSA-8940070","Reactome:R-HSA-109480","Reactome:R-HSA-109291","Reactome:R-HSA-109387","Reactome:R-HSA-109470","Reactome:R-HSA-74248","Reactome:R-HSA-8940074","Reactome:R-HSA-9755078","MetaCyc:5-NUCLEOTID-RXN","Reactome:R-HSA-109514"],"synonyms":[{"name":"5' nucleotidase activity","type":"exact"},{"name":"5'-AMP nucleotidase","type":"narrow"},{"name":"5'-AMPase","type":"narrow"},{"name":"5'-adenylic phosphatase","type":"narrow"},{"name":"5'-mononucleotidase activity","type":"related"},{"name":"5'-ribonucleotide phosphohydrolase activity","type":"related"},{"name":"AMP phosphatase","type":"narrow"},{"name":"AMP phosphohydrolase","type":"narrow"},{"name":"AMPase","type":"narrow"},{"name":"UMPase","type":"narrow"},{"name":"adenosine 5'-phosphatase","type":"narrow"},{"name":"adenosine monophosphatase","type":"narrow"},{"name":"snake venom 5'-nucleotidase","type":"narrow"},{"name":"thimidine monophosphate nucleotidase","type":"narrow"},{"name":"uridine 5'-nucleotidase","type":"narrow"}],"termid":"GO:0008253","terms_by_termid":{"GO:0008253":null,"GO:0050483":null,"GO:0050484":null}}


id: PBO:0088838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1","termid":"PBO:0088838"}


id: PBO:0057782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2909","termid":"PBO:0057782"}


id: PBO:0055484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2917","termid":"PBO:0055484"}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: PBO:0055716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMF1 antisense RNA 1","termid":"PBO:0055716"}


id: PBO:0079938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor family member 3","termid":"PBO:0079938"}


id: GO:0005530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Lectins are proteins obtained particularly from the seeds of leguminous plants, but also from many other plant and animal sources, that have binding sites for specific mono or oligosaccharides in cell walls or membranes. They thereby change the physiology of the membrane to cause agglutination, mitosis, or other biochemical changes in the cell.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lectin (obsolete GO:0005530)","synonyms":[{"name":"lectin","type":"exact"}],"termid":"GO:0005530"}


id: FYPO:0000816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a substance released into the growth medium by cells is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased concentration of substance in growth medium","synonyms":[{"name":"decreased accumulation of substance in growth medium","type":"related"},{"name":"decreased level of substance in growth medium","type":"exact"},{"name":"decreased release of substance into growth medium","type":"related"},{"name":"reduced concentration of substance in growth medium","type":"exact"}],"termid":"FYPO:0000816"}


id: GO:0046823
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances between the cytoplasm and the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"negatively_regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleocytoplasmic transport","type":"exact"},{"name":"down-regulation of nucleocytoplasmic transport","type":"exact"},{"name":"downregulation of nucleocytoplasmic transport","type":"exact"},{"name":"inhibition of nucleocytoplasmic transport","type":"narrow"}],"termid":"GO:0046823","terms_by_termid":{"GO:0042308":null}}


id: GO:0072758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a topoisomerase inhibitor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to topoisomerase inhibitor","termid":"GO:0072758"}


id: GO:1990600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of a single-stranded DNA endodeoxyribonuclease activator activity.","definition_xrefs":["PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activator activity","termid":"GO:0140656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"single-stranded DNA endodeoxyribonuclease activator activity","termid":"GO:1990600"}


id: PBO:0039756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APP divergent transcript","termid":"PBO:0039756"}


id: GO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a tumor cell that act to protect the cell or organism.","definition_xrefs":["GOC:add","PMID:16730260","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to tumor cell","termid":"GO:0002357"}


id: GO:1904486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 17alpha-ethynylestradiol stimulus.","definition_xrefs":["PMID:18805421","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to 17alpha-ethynylestradiol (obsolete GO:1904486)","termid":"GO:1904486"}


id: FYPO:0003479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A signal transduction phenotype in which the MAPK cascade involved in cell wall organization or biogenesis is activated continuously.","definition_xrefs":["PMID:23934882","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"constitutively activated MAPK cascade involved in cell wall organization or biogenesis","synonyms":[{"name":"constitutively activated MAPK cascade involved in cell wall organisation or biogenesis","type":"exact"},{"name":"constitutively activated Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"continuous MAPK cascade involved in cell wall organization or biogenesis","type":"exact"}],"termid":"FYPO:0003479"}


id: PBO:0035830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0035830"}


id: PBO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2088","termid":"PBO:0054680"}


id: GO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+. Can also use malonate (3-oxopropanoate) as a substrate. The reaction occurs in two steps with the decarboxylation process preceding CoA-binding. Bicarbonate rather than CO2 is released as a final product.","definition_xrefs":["EC:1.2.1.27","PMID:2768248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity","secondary_identifiers":["MetaCyc:1.2.1.27-RXN","Reactome:R-HSA-70893"],"synonyms":[{"name":"MMSA dehydrogenase activity","type":"related"},{"name":"MSDH activity","type":"related"},{"name":"methylmalonate-semialdehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0004491"}


id: FYPO:0003263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more than four, and up to eight, spores form following conjugation and subsequent sporulation.","definition_xrefs":["PMID:24196444","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more than four spores","synonyms":[{"name":"8-spored asci","type":"related"},{"name":"abnormal ascospore formation resulting in formation of asci with more than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more than four spores","type":"exact"},{"name":"asci with increased number of spores","type":"exact"},{"name":"eight-spored asci","type":"related"}],"termid":"FYPO:0003263"}


id: GO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing a plastid and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid envelope","termid":"GO:0009526"}


id: GO:0008386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + reduced adrenal ferredoxin + O2 = pregnenolone + 4-methylpentanal + oxidized adrenal ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol monooxygenase (side-chain-cleaving) activity","secondary_identifiers":["Reactome:R-HSA-193054","Reactome:R-HSA-193065","Reactome:R-HSA-193101","RHEA:35739","MetaCyc:1.14.15.6-RXN"],"synonyms":[{"name":"C27-side chain cleavage enzyme","type":"related"},{"name":"Cyp11a1","type":"narrow"},{"name":"cholesterol 20-22-desmolase activity","type":"related"},{"name":"cholesterol C(20-22) desmolase activity","type":"related"},{"name":"cholesterol C20-22 desmolase activity","type":"related"},{"name":"cholesterol desmolase activity","type":"related"},{"name":"cholesterol side-chain cleavage enzyme activity","type":"related"},{"name":"cholesterol side-chain-cleaving enzyme activity","type":"related"},{"name":"cholesterol,reduced-adrenal-ferredoxin:oxygen oxidoreductase (side-chain-cleaving)","type":"related"},{"name":"cytochrome P-450(scc) activity","type":"narrow"},{"name":"cytochrome P-450scc","type":"related"},{"name":"cytochrome p450(scc) activity","type":"narrow"},{"name":"cytochrome p450scc","type":"related"},{"name":"desmolase, steroid 20-22","type":"related"},{"name":"enzymes, cholesterol side-chain-cleaving","type":"related"},{"name":"steroid 20-22 desmolase activity","type":"broad"},{"name":"steroid 20-22-lyase activity","type":"broad"}],"termid":"GO:0008386"}


id: PBO:0066977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 280","termid":"PBO:0066977"}


id: PBO:0055362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2791","termid":"PBO:0055362"}


id: PBO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 2","termid":"PBO:0061568"}


id: PBO:0088343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidic acid transfer protein Ups1","termid":"PBO:0088343"}


id: GO:0098929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of spine apparatus membrane (obsolete GO:0098929)","termid":"GO:0098929"}


id: GO:1901481
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100378],"is_not":false,"summary":null,"term":"GO:1901481"}]},"cv_name":"biological_process","definition":"Any L-glutamate import that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-glutamate import involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1901481","terms_by_termid":{"GO:1901481":null}}


id: PBO:0054044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1385","termid":"PBO:0054044"}


id: FYPO:0002905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere maintenance","synonyms":[{"name":"normal telomere maintenance during mitotic cell cycle","type":"related"},{"name":"normal telomere maintenance during vegetative growth","type":"exact"}],"termid":"FYPO:0002905"}


id: GO:1900387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:15737616"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900387)","termid":"GO:1900387"}


id: GO:0010036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a boron-containing substance stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to boron-containing substance","synonyms":[{"name":"response to boron","type":"exact"}],"termid":"GO:0010036"}


id: PBO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 2","termid":"PBO:0044045"}


id: PBO:0066962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 264","termid":"PBO:0066962"}


id: GO:2000566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell proliferation","termid":"GO:0046641"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"},{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001187"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000566"}


id: GO:1901357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-D-galactofuranose.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"},{"relation_name":"is_a","term_name":"beta-D-galactofuranose metabolic process","termid":"GO:1901356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"beta-D-galactofuranose catabolic process","synonyms":[{"name":"beta-D-galactofuranose breakdown","type":"exact"},{"name":"beta-D-galactofuranose catabolism","type":"exact"},{"name":"beta-D-galactofuranose degradation","type":"exact"}],"termid":"GO:1901357"}


id: PBO:0039165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 8","termid":"PBO:0039165"}


id: GO:1990366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic acid.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete response to organic acid (obsolete GO:1990366)","synonyms":[{"name":"response to organic acid","type":"exact"}],"termid":"GO:1990366"}


id: PBO:0039005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF1 antisense RNA 1","termid":"PBO:0039005"}


id: GO:0102881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate = (-)-beta-barbatene + diphosphate.","definition_xrefs":["PMID:15918888","RHEA:73983","PMID:16297850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-beta-barbatene synthase activity","secondary_identifiers":["MetaCyc:RXN-8421"],"termid":"GO:0102881"}


id: GO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}


id: PBO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4A","termid":"PBO:0044800"}


id: PBO:0085549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14B has a paralog, RPS14A, that arose from the whole genome duplication","termid":"PBO:0085549"}


id: PBO:0054485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1885","termid":"PBO:0054485"}


id: GO:0102420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + 1-C16:0-alpha,omega-dicarboxyl-2-lysophosphatidate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102420)","termid":"GO:0102420"}


id: PBO:0060211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12A","termid":"PBO:0060211"}


id: GO:0070701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular region part that consists of a protective layer of mucus secreted by epithelial cells lining tubular organs of the body such as the colon or secreted into fluids such as saliva. Mucus is a viscous slimy secretion consisting of mucins (i.e. highly glycosylated mucin proteins) and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes.","definition_xrefs":["GOC:mm2","GOC:krc","PMID:18806221","PMID:19432394","GOC:mah","Wikipedia:Mucin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"mucus layer","synonyms":[{"name":"extracellular proteinaceous gel","type":"broad"},{"name":"mucous","type":"exact"},{"name":"mucous layer","type":"exact"},{"name":"mucus","type":"exact"}],"termid":"GO:0070701"}


id: PBO:0044746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 24","termid":"PBO:0044746"}


id: PBO:0072678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rubicon like autophagy enhancer","termid":"PBO:0072678"}


id: GO:0075503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with a host macropinosome membrane, that occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host endosome membrane","termid":"GO:0039654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion of virus membrane with host macropinosome membrane","synonyms":[{"name":"viral entry into host cell via macropinocytosis followed by membrane fusion with the endosome membrane","type":"exact"},{"name":"viral entry into host cell via macropinocytosis followed by membrane fusion with the host macropinosome membrane","type":"related"}],"termid":"GO:0075503"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: GO:0035594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ganglioside, a ceramide oligosaccharide carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid binding","termid":"GO:0043208"},{"relation_name":"is_a","term_name":"ceramide binding","termid":"GO:0097001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"ganglioside binding","termid":"GO:0035594"}


id: GO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrozeatin + NADP+ = H+ + NADPH + zeatin.","definition_xrefs":["RHEA:12757","EC:1.3.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"zeatin reductase activity","secondary_identifiers":["MetaCyc:ZEATIN-REDUCTASE-RXN","KEGG_REACTION:R05702"],"synonyms":[{"name":"dihydrozeatin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050472"}


id: PBO:0030570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_serine_level","termid":"PBO:0030570"}


id: GO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to and maintained in the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"posterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"posterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060814"}


id: PBO:0042840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP44 antisense RNA 1","termid":"PBO:0042840"}


id: PBO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMDA receptor synaptonuclear signaling and neuronal migration factor","termid":"PBO:0061534"}


id: GO:0070939
data:
  {"annotated_genes":["SJAG_01166","SJAG_04956"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96574,108170],"is_not":false,"summary":null,"term":"GO:0070939"}]},"cv_name":"cellular_component","definition":"A multisubunit tethering complex, i.e. a protein complex involved in mediating the initial interaction between vesicles and the membranes with which they fuse, that is involved in trafficking from the Golgi apparatus to the ER. In Saccharomyces cerevisiae the Dsl1p complex contains Dsl1p, Tip20p, and Sec39p.","definition_xrefs":["PMID:19151722","PMID:21550981","GOC:mah","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01166":null,"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dsl1/NZR complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CATCHR family complex","type":"broad"},{"name":"Dsl1p complex","type":"exact"},{"name":"NZR complex","type":"exact"}],"termid":"GO:0070939","terms_by_termid":{"GO:0070939":null}}


id: PR:O74174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit G 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit G (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.05c","secondary_identifiers":["UniProtKB:O74174"],"synonyms":[{"name":"Spom972h-ATP6V1G2","type":"exact"},{"name":"V-ATPase subunit G (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit G (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74174"}


id: PBO:0090706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Hhp1","termid":"PBO:0090706"}


id: PBO:0088554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid transfer protein Ups2","termid":"PBO:0088554"}


id: PBO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Smn1","termid":"PBO:0000611"}


id: PBO:0031665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_modification","termid":"PBO:0031665"}


id: PATO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the extent of space between two entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distance","termid":"PATO:0000040"}


id: PBO:0057640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1231","termid":"PBO:0057640"}


id: FYPO:0007543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which double-stranded DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"abolished double-stranded DNA binding","synonyms":[{"name":"abolished dsDNA binding","type":"exact"},{"name":"double-stranded DNA binding abolished","type":"exact"}],"termid":"FYPO:0007543"}


id: PBO:0042291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 delta subunit of T-cell receptor complex","termid":"PBO:0042291"}


id: PBO:0056265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 1","termid":"PBO:0056265"}


id: PBO:0067025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 38, pseudogene","termid":"PBO:0067025"}


id: PBO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 28","termid":"PBO:0039508"}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: PBO:0080062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 31","termid":"PBO:0080062"}


id: PBO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 4","termid":"PBO:0052014"}


id: PBO:0069231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 486, pseudogene","termid":"PBO:0069231"}


id: PBO:0110494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 10","termid":"PBO:0110494"}


id: PBO:0040793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone gamma-carboxyglutamate protein","termid":"PBO:0040793"}


id: GO:1901484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:al","GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription factor catabolic process (obsolete GO:1901484)","synonyms":[{"name":"down regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor breakdown","type":"exact"},{"name":"down regulation of transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor catabolism","type":"exact"},{"name":"down regulation of transcription factor degradation","type":"exact"},{"name":"down-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor breakdown","type":"exact"},{"name":"down-regulation of transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor catabolism","type":"exact"},{"name":"down-regulation of transcription factor degradation","type":"exact"},{"name":"downregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"downregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor breakdown","type":"exact"},{"name":"downregulation of transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor catabolism","type":"exact"},{"name":"downregulation of transcription factor degradation","type":"exact"},{"name":"inhibition of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"inhibition of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"inhibition of transcription factor breakdown","type":"exact"},{"name":"inhibition of transcription factor catabolic process","type":"narrow"},{"name":"inhibition of transcription factor catabolism","type":"exact"},{"name":"inhibition of transcription factor degradation","type":"exact"},{"name":"negative regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"negative regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"negative regulation of transcription factor breakdown","type":"exact"},{"name":"negative regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901484"}


id: GO:0009445
data:
  {"annotated_genes":["SJAG_00043","SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[84006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving putrescine, 1,4-diaminobutane; putrescine can be formed by decarboxylation of ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"putrescine metabolism","type":"exact"}],"termid":"GO:0009445","terms_by_termid":{"GO:0009447":null,"GO:0033387":null}}


id: PBO:0061659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB like endocytic adaptor protein","termid":"PBO:0061659"}


id: GO:0030120
data:
  {"annotated_genes":["SJAG_04391","SJAG_01167","SJAG_04070","SJAG_00906","SJAG_05345","SJAG_00192","SJAG_02482","SJAG_00379","SJAG_04565","SJAG_03153","SJAG_02539","SJAG_04609","SJAG_04644","SJAG_01809","SJAG_00284","SJAG_05344","SJAG_02805","SJAG_02234","SJAG_00800","SJAG_02282","SJAG_03907","SJAG_04569","SJAG_00104","SJAG_00072","SJAG_02349","SJAG_03558","SJAG_01508","SJAG_04474","SJAG_04002","SJAG_04517","SJAG_02177"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115380,97677,109295,109509],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[104856,108115,108174,92833],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[91459,109418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"},{"annotations":[114991,111389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030125"},{"annotations":[110259,99809,95024,100661,112882,113906,103654,95113,89795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030126"},{"annotations":[89927,108497,105252,106732,92082,70810,74409,109226,113103,103091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"A membrane coat found on a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane coat","termid":"GO:0030117"},{"relation_name":"part_of","term_name":"coated vesicle membrane","termid":"GO:0030662"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vesicle coat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1177708494"],"termid":"GO:0030120","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null}}


id: GO:1900658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of emericellamide biosynthetic process","synonyms":[{"name":"regulation of emericellamide anabolism","type":"exact"},{"name":"regulation of emericellamide biosynthesis","type":"exact"},{"name":"regulation of emericellamide formation","type":"exact"},{"name":"regulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900658"}


id: GO:1900062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging.","definition_xrefs":["PMID:17914901","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging (obsolete GO:1900062)","synonyms":[{"name":"regulation of replicative cell ageing","type":"exact"}],"termid":"GO:1900062"}


id: PR:C6Y4A3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp19 gene.","definition_xrefs":["UniProtKB:C6Y4A3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit K, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.10c","synonyms":[{"name":"Spom972h-atp19","type":"exact"}],"termid":"PR:C6Y4A3"}


id: PBO:0109143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion Ema19","termid":"PBO:0109143"}


id: GO:0060739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted contributing to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate gland development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060739"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: GO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, CtIP and Mre11/Rad50/NBS1 (M/R/N) complex, and binds to DNA at DNA damage sites. BRCA1-C binding ta damaged DNA is required for DNA damage-induced Chk1 phosphorylation and the G2/M transition checkpoint.","definition_xrefs":["PMID:15485915","PMID:16391231","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"BRCA1-C complex","termid":"GO:0070533"}


id: PBO:0087873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; acts as a nuclear anchor to retain the ribonucleotide reductase small subunit heterodimer, Rnr2p-Rnr4p, in the nucleus when cells are not in S phase; contains WD repeats","termid":"PBO:0087873"}


id: GO:2000882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"negative regulation of starch metabolic process","termid":"GO:2000905"},{"relation_name":"negatively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of starch catabolic process","synonyms":[{"name":"negative regulation of starch breakdown","type":"exact"},{"name":"negative regulation of starch catabolism","type":"exact"},{"name":"negative regulation of starch degradation","type":"exact"}],"termid":"GO:2000882"}


id: GO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell tolerance induction","synonyms":[{"name":"regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"regulation of B-cell tolerance induction","type":"exact"},{"name":"regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002661"}


id: PBO:0017799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family mitochondrial protein (predicted)","termid":"PBO:0017799"}


id: PATO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000863 righting reflex value (obsolete PATO:0000863)","termid":"PATO:0000863"}


id: PR:O60106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14F5.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and RING finger protein C14F5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.10c","synonyms":[{"name":"Spom972h-SPBC14F5.10c","type":"exact"}],"termid":"PR:O60106"}


id: PBO:0029077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_vegetative_growth","termid":"PBO:0029077"}


id: PBO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cadmium","termid":"PBO:0031460"}


id: GO:0009833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of cellulose and pectin-containing cell walls that form adjacent to the middle lamella following cell division and during cell expansion. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"plant-type primary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall anabolism","type":"broad"},{"name":"primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall biosynthetic process","type":"broad"},{"name":"primary cell wall formation","type":"broad"},{"name":"primary cell wall synthesis","type":"broad"}],"termid":"GO:0009833"}


id: GO:1905799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GOC:TermGenie","PMID:27930654","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intraciliary retrograde transport","synonyms":[{"name":"regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905799"}


id: PBO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein (predicted)","termid":"PBO:0001634"}


id: GO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071343)","synonyms":[{"name":"negative regulation of establishment of actomyosin contractile ring localization","type":"exact"},{"name":"negative regulation of establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0071343"}


id: PBO:0034238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with_condition","termid":"PBO:0034238"}


id: GO:0032077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deoxyribonuclease activity","termid":"GO:0032070"},{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of deoxyribonuclease activity","synonyms":[{"name":"DNase activator","type":"related"},{"name":"activation of deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activator","type":"related"},{"name":"stimulation of deoxyribonuclease activity","type":"narrow"},{"name":"up regulation of deoxyribonuclease activity","type":"exact"},{"name":"up-regulation of deoxyribonuclease activity","type":"exact"},{"name":"upregulation of deoxyribonuclease activity","type":"exact"}],"termid":"GO:0032077"}


id: PR:O13988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protection of telomeres protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14513:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.06","secondary_identifiers":["UniProtKB:O13988"],"synonyms":[{"name":"SPAC26H5.06","type":"related"},{"name":"Spom972h-POT1","type":"exact"}],"termid":"PR:O13988"}


id: GO:0015950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleotide is synthesized from another purine nucleotide.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleotide interconversion","termid":"GO:0015950"}


id: GO:0035209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pupa over time, from its formation to the mature structure. The pupa is a dormant life stage interposed between the larval and the adult stages in insects that undergo a complete metamorphosis.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal development","termid":"GO:0035209"}


id: PBO:0027696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_cytoplasmic_microtubules","termid":"PBO:0027696"}


id: GO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foregut region specified to become the lung forms the initial left and right buds.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial bud","termid":"GO:0060572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary lung bud formation","synonyms":[{"name":"lung formation","type":"exact"}],"termid":"GO:0060431"}


id: SO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_right_handed_type_one","secondary_identifiers":["BS:00207"],"synonyms":[{"name":"asx turn type right handed type one","type":"exact"},{"name":"asx_turn_ir","type":"exact"}],"termid":"SO:0001132"}


id: GO:1903469
data:
  {"annotated_genes":["SJAG_00400","SJAG_01884","SJAG_04183","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84894,99493,100698,109035],"is_not":false,"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"Any DNA replication, removal of RNA primer that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:1234","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, removal of RNA primer","termid":"GO:0043137"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_03780":null,"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"removal of RNA primer involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication, removal of RNA primer involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication, removal of RNA primer involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"Okazaki initiator RNA removal involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"Okazaki initiator RNA removal involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"Okazaki initiator RNA removal involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"Okazaki initiator RNA removal involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"Okazaki initiator RNA removal involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"Okazaki initiator RNA removal involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903469","terms_by_termid":{"GO:1903469":null}}


id: MOD:01465
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methioninium (protonated L-methionine) residue to an N6,N6,N6-trimethyl-L-methionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-methionine (from L-methioninium)","synonyms":[{"name":"N2Me3Met","type":"exact"}],"termid":"MOD:01465"}


id: GO:1904991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:kmv","PMID:26554819","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"negative regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904991"}


id: GO:2000676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"positive regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"positive regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"positive regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000676"}


id: FYPO:0001808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal adenine import","termid":"FYPO:0001807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased adenine import","synonyms":[{"name":"decreased adenine import across plasma membrane","type":"exact"},{"name":"decreased adenine import during mitotic cell cycle","type":"related"},{"name":"decreased adenine import during vegetative growth","type":"exact"},{"name":"decreased adenine import into cell","type":"exact"},{"name":"decreased adenine uptake","type":"exact"},{"name":"reduced adenine import","type":"exact"}],"termid":"FYPO:0001808"}


id: PATO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000198 absolute consumption (obsolete PATO:0000198)","termid":"PATO:0000198"}


id: PBO:0055840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 1","termid":"PBO:0055840"}


id: PBO:0082701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque; a membrane-organizing center which is assembled on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane; potential Cdc28p substrate","termid":"PBO:0082701"}


id: GO:1900359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of nigerotriose transport","termid":"GO:1900357"},{"relation_name":"positively_regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nigerotriose transport","synonyms":[{"name":"activation of nigerotriose transport","type":"narrow"},{"name":"up regulation of nigerotriose transport","type":"exact"},{"name":"up-regulation of nigerotriose transport","type":"exact"},{"name":"upregulation of nigerotriose transport","type":"exact"}],"termid":"GO:1900359"}


id: PBO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 52","termid":"PBO:0071211"}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: PBO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 1","termid":"PBO:0047576"}


id: PBO:0041618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 4","termid":"PBO:0041618"}


id: GO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homocystine + 2 reduced glutathione = oxidized glutathione + 2 homocysteine.","definition_xrefs":["MetaCyc:1.8.4.1-RXN","EC:1.8.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutathione-homocystine transhydrogenase activity","secondary_identifiers":["RHEA:11464"],"synonyms":[{"name":"glutathione:homocystine oxidoreductase activity","type":"related"}],"termid":"GO:0047139"}


id: PBO:0057361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-1","termid":"PBO:0057361"}


id: GO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpene catabolic process","termid":"GO:0051763"}


id: PBO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rix7 (predicted)","termid":"PBO:0003827"}


id: PBO:0065173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 1","termid":"PBO:0065173"}


id: GO:0016613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a vanadium-iron cluster found in some species, such as Azotobacter vinelandii. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the vanadium-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:3474027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"vanadium-iron nitrogenase complex","synonyms":[{"name":"vanadium-iron nitrogenase activity","type":"related"}],"termid":"GO:0016613"}


id: GO:0016722
data:
  {"annotated_genes":["SJAG_03862","SJAG_04459","SJAG_04743","SJAG_04677","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99281,86612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"},{"annotations":[100334,109311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052851"},{"annotations":[89032,110391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the oxidation state of metal ion is altered.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":5,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04042":null,"SJAG_04459":null,"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.16.-.-","Reactome:R-HSA-917805"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions","type":"related"},{"name":"oxidoreductase activity, reducing metal ions","type":"related"}],"termid":"GO:0016722","terms_by_termid":{"GO:0004322":null,"GO:0030586":null,"GO:0052851":null}}


id: PBO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 35","termid":"PBO:0070500"}


id: PBO:0086776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086776"}


id: PBO:0054298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1689","termid":"PBO:0054298"}


id: PBO:0041500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71B, pseudogene","termid":"PBO:0041500"}


id: GO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"LinE complex","termid":"GO:0062119"}


id: PR:Q9UTM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1420.01c gene.","definition_xrefs":["UniProtKB:Q9UTM5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1420.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.01c","synonyms":[{"name":"Spom972h-SPAC1420.01c","type":"exact"}],"termid":"PR:Q9UTM5"}


id: PBO:0056088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ly1 antibody reactive","termid":"PBO:0056088"}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: PBO:0077009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombomodulin","termid":"PBO:0077009"}


id: GO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host programmed cell death, leading to a decrease in the frequency, rate or extent of programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host programmed cell death","synonyms":[{"name":"down regulation by symbiont of host programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host programmed cell death","type":"narrow"},{"name":"inhibition of host programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host programmed cell death","type":"exact"},{"name":"suppression by symbiont of host PCD","type":"exact"},{"name":"suppression by symbiont of host programmed cell death","type":"exact"}],"termid":"GO:0052041"}


id: SO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U1 is a small nuclear RNA (snRNA) component of the spliceosome (involved in pre-mRNA splicing). Its 5' end forms complementary base pairs with the 5' splice junction, thus defining the 5' donor site of an intron. There are significant differences in sequence and secondary structure between metazoan and yeast U1 snRNAs, the latter being much longer (568 nucleotides as compared to 164 nucleotides in human). Nevertheless, secondary structure predictions suggest that all U1 snRNAs share a 'common core' consisting of helices I, II, the proximal region of III, and IV.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U1_snRNA"],"synonyms":[{"name":"U1 small nuclear RNA","type":"exact"},{"name":"U1 snRNA","type":"exact"},{"name":"small nuclear RNA U1","type":"exact"},{"name":"snRNA U1","type":"exact"}],"termid":"SO:0000391"}


id: GO:0060957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an endocardial cell fate and its capacity to differentiate into an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate commitment","termid":"GO:0060839"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"endocardial cell differentiation","termid":"GO:0060956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell fate commitment","termid":"GO:0060957"}


id: PBO:0069139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 390, pseudogene","termid":"PBO:0069139"}


id: GO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-ribulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.13","RHEA:21356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.13-RXN","KEGG_REACTION:R02441"],"synonyms":[{"name":"L-arabinitol 2-dehydrogenase (ribulose forming) activity","type":"exact"}],"termid":"GO:0047002"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: PR:P30666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04285","PANTHER:PTHR11630:SF46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.02c","secondary_identifiers":["UniProtKB:P30666"],"synonyms":[{"name":"Spom972h-MCM3","type":"exact"},{"name":"minichromosome maintenance protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30666"}


id: PBO:0062610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily T member 1 pseudogene","termid":"PBO:0062610"}


id: PBO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule pseudogene 1","termid":"PBO:0042326"}


id: PBO:0085942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA)","termid":"PBO:0085942"}


id: PBO:0069372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 632, pseudogene","termid":"PBO:0069372"}


id: PBO:0033804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0033804"}


id: GO:0070335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aspartate, the alpha-amino-acid anion of 2-aminobutanedioic acid that has formula C4H5NO4.","definition_xrefs":["GOC:mah","CHEBI:29995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"aspartate binding","synonyms":[{"name":"aspartic acid binding","type":"exact"}],"termid":"GO:0070335"}


id: GO:0060128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a corticotropic hormone secreting cell. An corticotropic hormone secreting cell is a basophil cell of the anterior pituitary that produces corticotropin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticotropin hormone secreting cell differentiation","synonyms":[{"name":"adrenocorticotrophic hormone secreting cell differentiation","type":"exact"},{"name":"adrenocorticotropic hormone secreting cell differentiation","type":"exact"},{"name":"corticotrope differentiation","type":"exact"},{"name":"corticotroph differentiation","type":"exact"},{"name":"corticotrophin hormone secreting cell differentiation","type":"related"}],"termid":"GO:0060128"}


id: PR:Q12519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.07c gene.","definition_xrefs":["UniProtKB:Q12519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C330.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.07c","synonyms":[{"name":"Spom972h-SPCC330.07c","type":"exact"}],"termid":"PR:Q12519"}


id: PBO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary spastic paraplegia","termid":"PBO:0003297"}


id: GO:0008937
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[106213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced ferredoxin + NAD(P)+ = oxidized ferredoxin + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor","termid":"GO:0016731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ferredoxin-NAD(P) reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferredoxin reductase activity","type":"broad"}],"termid":"GO:0008937","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: PBO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B","termid":"PBO:0043032"}


id: PBO:0054571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1973","termid":"PBO:0054571"}


id: PBO:0048985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled bile acid receptor 1","termid":"PBO:0048985"}


id: GO:0102409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA + sn-glycerol 3-phosphate(2-) = coenzyme A + 2-docosanoyl-glycerol 3-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-CoA acyl transferase activity (obsolete GO:0102409)","termid":"GO:0102409"}


id: FYECO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"P-factor, the mating pheromone secreted by P-cells, was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000022 absence of P-factor (obsolete FYECO:0000022)","termid":"FYECO:0000022"}


id: PBO:0061860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 1","termid":"PBO:0061860"}


id: PBO:0040636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARX homeobox 2","termid":"PBO:0040636"}


id: GO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-hydroxyacetophenone + H+ + NADPH + O2 = 4-hydroxyphenyl acetate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.84","RHEA:22916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyacetophenone monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0756","KEGG_REACTION:R06892","MetaCyc:1.14.13.84-RXN"],"synonyms":[{"name":"(4-hydroxyphenyl)ethan-1-one,NADPH:oxygen oxidoreductase (ester-forming) activity","type":"exact"},{"name":"HAPMO","type":"related"}],"termid":"GO:0033767"}


id: PBO:0065799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3HDML antisense RNA 1","termid":"PBO:0065799"}


id: MOD:00334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between the tele nitrogen of a histidine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0329","Unimod:390#H","PubMed:12121092","PubMed:12033922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-heme-L-histidine","synonyms":[{"name":"(S)-[7-ethenyl-12-[1-((2-amino-2-carboxyethyl)-1H-imidazol-1-yl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"1'-heme-L-histidine","type":"exact"},{"name":"2-[1-(N1'-histidyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via tele nitrogen)","type":"exact"},{"name":"Heme","type":"related"},{"name":"N(epsilon)-histidyl heme","type":"exact"},{"name":"N(tau)-histidyl heme","type":"exact"},{"name":"N1'-histidyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"tele-histidyl heme","type":"exact"}],"termid":"MOD:00334"}


id: PBO:0044650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCTN1 antisense RNA 1","termid":"PBO:0044650"}


id: PR:O13917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine-guanine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.13c","synonyms":[{"name":"HGPRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HGPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hpt1","type":"exact"}],"termid":"PR:O13917"}


id: PBO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor gamma","termid":"PBO:0048769"}


id: GO:0007002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere binding (obsolete GO:0007002)","synonyms":[{"name":"centromere binding","type":"exact"}],"termid":"GO:0007002"}


id: PBO:0062796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL1 pseudogene 1","termid":"PBO:0062796"}


id: PBO:0048777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase 2","termid":"PBO:0048777"}


id: PR:Q09689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00213","PANTHER:PTHR23001:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.05c","secondary_identifiers":["UniProtKB:Q09689"],"synonyms":[{"name":"Spom972h-EIF5","type":"exact"},{"name":"eIF-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09689"}


id: PBO:0049834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDHD5 antisense RNA 1","termid":"PBO:0049834"}


id: PBO:0013126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase","termid":"PBO:0013126"}


id: PBO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 14","termid":"PBO:0060578"}


id: PBO:0045488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 4","termid":"PBO:0045488"}


id: FYPO:0001194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased beta-glucan level","synonyms":[{"name":"increased beta-D-glucan level","type":"exact"},{"name":"increased beta-glucan accumulation","type":"related"},{"name":"increased beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased beta-glucan level during vegetative growth","type":"exact"},{"name":"increased cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001194"}


id: PBO:0059760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 34","termid":"PBO:0059760"}


id: GO:0050785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with advanced glycation end-products and transmitting the signal to initiate a change in cell activity. Advanced glycation end-products (AGEs) form from a series of chemical reactions after an initial glycation event (a non-enzymatic reaction between reducing sugars and free amino groups of proteins).","definition_xrefs":["PMID:9224812","PMID:7592757","PMID:12707408","Wikipedia:RAGE_(receptor)","PMID:12453678","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"advanced glycation end-product receptor activity","synonyms":[{"name":"AGE receptor activity","type":"exact"},{"name":"RAGE activity","type":"exact"}],"termid":"GO:0050785"}


id: PBO:0081324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF114 antisense RNA 1","termid":"PBO:0081324"}


id: PBO:0017697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43 (predicted)","termid":"PBO:0017697"}


id: PBO:0059045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS22 like, DNA repair protein","termid":"PBO:0059045"}


id: GO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that includes cytoskeletal components and part of the cell membrane. Forms at the nuclear end of a male germline syncytium, or cyst, and translocates the over the length of the syncytium in the course of sperm individualization. Each complex contains an array of 64 investment cones, one per nucleus, that move synchronously along the spermatogenic cyst.","definition_xrefs":["PMID:9550716","PMID:10588662","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm individualization complex","termid":"GO:0070864"}


id: GO:0042301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphate ion.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphate ion binding","termid":"GO:0042301"}


id: GO:0060064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the anterior end of the primitive streak of the embryo that acts as the main signaling center establishing the body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the anterior end of the primitive streak","synonyms":[{"name":"Spemann organizer formation in amniotes","type":"related"},{"name":"Spemann's organizer formation at the anterior end of the primitive streak","type":"exact"},{"name":"Spemann-Mangold organizer formation at the anterior end of the primitive streak","type":"related"}],"termid":"GO:0060064"}


id: PBO:0027353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_thiamine_level_during_stationary_phase","termid":"PBO:0027353"}


id: MOD:00141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["PubMed:3208761","PubMed:14588022","PubMed:3838747","PubMed:8876649","RESID:AA0132","ChEBI:15618","Unimod:388#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phycoerythrobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"Phycoerythrobilin","type":"related"},{"name":"S-phycoerythrobilin-L-cysteine","type":"exact"},{"name":"phycoerythrobilin","type":"related"},{"name":"phycoerythrobilin cysteine adduct","type":"exact"}],"termid":"MOD:00141"}


id: GO:1901076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["PMID:19402756","GOC:TermGenie","GO:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic cell clearance","termid":"GO:2000427"},{"relation_name":"positively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of engulfment of apoptotic cell","synonyms":[{"name":"activation of engulfment of apoptotic cell","type":"narrow"},{"name":"activation of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"activation of engulfment of cell corpse","type":"narrow"},{"name":"positive regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"positive regulation of engulfment of cell corpse","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up regulation of engulfment of cell corpse","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up-regulation of engulfment of cell corpse","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"upregulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901076"}


id: PBO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E like","termid":"PBO:0051582"}


id: PBO:0063982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 16","termid":"PBO:0063982"}


id: GO:0030194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"positive regulation of coagulation","termid":"GO:0050820"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"positive regulation of hemostasis","termid":"GO:1900048"},{"relation_name":"positively_regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood coagulation","synonyms":[{"name":"activation of blood coagulation","type":"narrow"},{"name":"stimulation of blood coagulation","type":"narrow"},{"name":"up regulation of blood coagulation","type":"exact"},{"name":"up-regulation of blood coagulation","type":"exact"},{"name":"upregulation of blood coagulation","type":"exact"}],"termid":"GO:0030194"}


id: PBO:0083099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA dependent ATPase/DNA helicase; helicase belonging to the Dna2p- and Nam7p-like family of helicases that is involved in modulating translation termination; interacts with the translation termination factors, localized to polysomes","termid":"PBO:0083099"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: GO:0032475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to an otolith. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"otolith morphogenesis","termid":"GO:0032474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith formation","termid":"GO:0032475"}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["GOC:pr","GOC:BHF","PMID:19730411","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: PBO:0060741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 6","termid":"PBO:0060741"}


id: GO:0097734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of an extracellular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane.","definition_xrefs":["PMID:25392495","PMID:19442504","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular exosome biogenesis","synonyms":[{"name":"ILV assembly","type":"related"},{"name":"exosome assembly or secretion","type":"exact"},{"name":"exosome biogenesis","type":"exact"},{"name":"exosome production","type":"exact"},{"name":"intraluminal vesicle assembly","type":"related"}],"termid":"GO:0097734"}


id: PBO:0087529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex; conserved region at N-terminus is essential for interaction with the NPC (nucleosome core particle); required for autophagy; homologous to Drosophila Enhancer of Polycomb; coding sequence contains length polymorphisms in different strains","termid":"PBO:0087529"}


id: PBO:0064387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 9","termid":"PBO:0064387"}


id: GO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["PMID:21781281","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"modulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044488"}


id: GO:1905018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:1665486"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of methionine-tRNA ligase activity (obsolete GO:1905018)","synonyms":[{"name":"regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"regulation of MetRS activity","type":"exact"},{"name":"regulation of methionine translase activity","type":"exact"},{"name":"regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905018"}


id: GO:1904171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:TermGenie","PMID:25651887","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"negatively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bleb assembly","synonyms":[{"name":"down regulation of bleb assembly","type":"exact"},{"name":"down regulation of cell blebbing","type":"exact"},{"name":"down-regulation of bleb assembly","type":"exact"},{"name":"down-regulation of cell blebbing","type":"exact"},{"name":"downregulation of bleb assembly","type":"exact"},{"name":"downregulation of cell blebbing","type":"exact"},{"name":"inhibition of bleb assembly","type":"narrow"},{"name":"inhibition of cell blebbing","type":"narrow"},{"name":"negative regulation of cell blebbing","type":"exact"}],"termid":"GO:1904171"}


id: PBO:0075958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor family member 2","termid":"PBO:0075958"}


id: PBO:0062869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 6A","termid":"PBO:0062869"}


id: GO:0106105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated ala-tRNA(thr).","definition_xrefs":["PMID:29410408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140101","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"Ala-tRNA(Thr) hydrolase activity","synonyms":[{"name":"L-alanyl-tRNA(Thr) deacylase","type":"exact"}],"termid":"GO:0106105"}


id: GO:0031320
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hexitol + acceptor = hexose + reduced acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hexitol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031320","terms_by_termid":{"GO:0046526":null}}


id: GO:1901122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacitracin A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A metabolic process","synonyms":[{"name":"bacitracin A metabolism","type":"exact"}],"termid":"GO:1901122"}


id: PBO:0075976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 2","termid":"PBO:0075976"}


id: PBO:0047216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member B","termid":"PBO:0047216"}


id: MOD:01452
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein amino acid O-phosphopantetheine-L-serine with secondary neutral loss of pantetheine resulting in O-phospho-L-serine.","definition_xrefs":["PubMed:18688235","PubMed:17042494"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphopantetheine-L-serine with neutral loss of pantetheine","termid":"MOD:01452"}


id: PBO:0049665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H19 imprinted maternally expressed transcript","termid":"PBO:0049665"}


id: PBO:0029906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat","termid":"PBO:0029906"}


id: PBO:0064880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit alpha","termid":"PBO:0064880"}


id: PBO:0053559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 567","termid":"PBO:0053559"}


id: GO:1905411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cohesin unloading","termid":"GO:1905339"},{"relation_name":"is_a","term_name":"regulation of mitotic cohesin unloading","termid":"GO:1905410"},{"relation_name":"positively_regulates","term_name":"mitotic cohesin unloading","termid":"GO:0061781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cohesin unloading","termid":"GO:1905411"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: PBO:0052515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 29","termid":"PBO:0052515"}


id: PBO:0061127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin B","termid":"PBO:0061127"}


id: PR:P78831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.14","synonyms":[{"name":"Spom972h-ght5","type":"exact"},{"name":"hexose transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78831"}


id: GO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment in which the cell is designated to follow a developmental path, unless they receive extrinsic cues that direct an alternative fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification","termid":"GO:0001708"}


id: PBO:0077309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 45B","termid":"PBO:0077309"}


id: PBO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca2 (predicted)","termid":"PBO:0018173"}


id: PBO:0056077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6G6F-LY6G6D readthrough","termid":"PBO:0056077"}


id: PBO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sporulation","termid":"PBO:0031628"}


id: PBO:0017921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transmembrane transporter (predicted)","termid":"PBO:0017921"}


id: PBO:0089435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1-like","termid":"PBO:0089435"}


id: GO:1902738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["PMID:8662546","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:0003413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:1902738"}


id: GO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"},{"relation_name":"is_a","term_name":"anchoring collagen complex","termid":"GO:0030934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XII trimer","termid":"GO:0005595"}


id: GO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the epoxidation of double bonds of the arachidonoyl moiety of anandamide.","definition_xrefs":["PMID:21289075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anandamide epoxidase activity","synonyms":[{"name":"arachidonoylethanolamide epoxidase activity","type":"exact"}],"termid":"GO:0062186"}


id: PBO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 1","termid":"PBO:0062160"}


id: PBO:0034055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by","termid":"PBO:0034055"}


id: PR:Q09788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asl1 gene.","definition_xrefs":["UniProtKB:Q09788","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkali-sensitive linkage protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.10c","synonyms":[{"name":"Spom972h-asl1","type":"exact"}],"termid":"PR:Q09788"}


id: GO:1900012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of corticotropin-releasing hormone receptor activity.","definition_xrefs":["PMID:18234674","GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of corticotropin-releasing hormone receptor activity (obsolete GO:1900012)","synonyms":[{"name":"positive regulation of CRF receptor activity","type":"exact"},{"name":"positive regulation of CRH receptor activity","type":"exact"},{"name":"positive regulation of adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"positive regulation of corticotropin-releasing factor receptor activity","type":"exact"},{"name":"up regulation of CRF receptor activity","type":"exact"},{"name":"up regulation of CRH receptor activity","type":"exact"},{"name":"up regulation of adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"up regulation of corticotropin-releasing factor receptor activity","type":"exact"},{"name":"up regulation of corticotropin-releasing hormone receptor activity","type":"related"}],"termid":"GO:1900012"}


id: GO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: PBO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (predicted)","termid":"PBO:0002085"}


id: GO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate commitment","secondary_identifiers":["GO:0042055"],"synonyms":[{"name":"neuron lineage restriction","type":"exact"},{"name":"neuronal lineage restriction","type":"exact"}],"termid":"GO:0048663"}


id: GO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C5a binding","termid":"GO:0001856"}


id: PR:Q9P7F3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt3 gene.","definition_xrefs":["UniProtKB:Q9P7F3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.02c","synonyms":[{"name":"Spom972h-amt3","type":"exact"},{"name":"ammonium transporter mep3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F3"}


id: PBO:0012017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialar to S. pombe SPAC1F8.07c (paralog)","termid":"PBO:0012017"}


id: PBO:0006185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substrate","termid":"PBO:0006185"}


id: PBO:0063093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG activating RBM14 associated lncRNA 1","termid":"PBO:0063093"}


id: PBO:0059545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (CUN) 2","termid":"PBO:0059545"}


id: GO:1990016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Elongated portion of a tanycyte that sticks into the periventricular layer of neuropil where it appears to contact a blood vessel; characterized by numerous cytoplasmic extensions. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao901230115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neck portion of tanycyte","synonyms":[{"name":"neck portion","type":"broad"}],"termid":"GO:1990016"}


id: GO:0003160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the endocardium is generated and organized. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardium morphogenesis","termid":"GO:0003160"}


id: PBO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I","termid":"PBO:0042730"}


id: PBO:0069586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 860, pseudogene","termid":"PBO:0069586"}


id: GO:0014863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a inactivity stimulus is received by a cell or organism and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of inactivity","termid":"GO:0014863"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: GO:0003034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003034"}


id: PR:Q9Y7Z2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.08","secondary_identifiers":["UniProtKB:Q9Y7Z2"],"synonyms":[{"name":"Spom972h-ARF6","type":"exact"}],"termid":"PR:Q9Y7Z2"}


id: PBO:0068217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 524","termid":"PBO:0068217"}


id: GO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular compartment in a host cell which increases the efficiency of viral replication, and shields the virus from host defenses. Viral factories can be either cytoplasmic or nuclear and often arise from extensive rearrangement of host cell cytoskeletal and/or cell membrane compartments.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral factory","synonyms":[{"name":"virus factory","type":"exact"}],"termid":"GO:0039713"}


id: GO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone binding (obsolete GO:0006717)","synonyms":[{"name":"juvenile hormone binding","type":"exact"}],"termid":"GO:0006717"}


id: PBO:0078499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-2","termid":"PBO:0078499"}


id: GO:0045031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ATP and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled purinergic nucleotide receptor activity","termid":"GO:0045028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled ATP receptor activity","synonyms":[{"name":"ATP-activated adenosine receptor activity","type":"related"},{"name":"ATP-activated nucleotide receptor activity","type":"broad"}],"termid":"GO:0045031"}


id: PBO:0028393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_osmotic_stress","termid":"PBO:0028393"}


id: PR:P50519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein hsp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.04c","synonyms":[{"name":"Spom972h-hsp9","type":"exact"}],"termid":"PR:P50519"}


id: PBO:0087984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; two forms of protein are made by alternative translation starts; localizes to both nucleus and mitochondrion to produce modified base N2,N2-dimethylguanosine in tRNAs in both compartments; nuclear Trm1p is evenly distributed around inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body (SPB) mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon SPB","termid":"PBO:0087984"}


id: GO:2000250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin cytoskeleton reorganization (obsolete GO:2000250)","synonyms":[{"name":"negative regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"negative regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000250"}


id: PBO:0028069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aggregated_mtDNA","termid":"PBO:0028069"}


id: PR:Q9HGM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AFG3-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23076:SF11","OMA:SCHPO04081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complexes assembly protein rca1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.09","secondary_identifiers":["UniProtKB:Q9HGM3"],"synonyms":[{"name":"Spom972h-AFG3L2","type":"exact"}],"termid":"PR:Q9HGM3"}


id: PBO:0074332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 divergent transcript","termid":"PBO:0074332"}


id: GO:0097630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","PMID:24591649","PMID:18725538"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of omegasome membrane (obsolete GO:0097630)","synonyms":[{"name":"intrinsic to omegasome membrane","type":"narrow"}],"termid":"GO:0097630"}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: PR:O74771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein dip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.10c","synonyms":[{"name":"Spom972h-dip1","type":"exact"}],"termid":"PR:O74771"}


id: PBO:0003885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp1","termid":"PBO:0003885"}


id: MOD:00552
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 4x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:14670044","Unimod:199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-CHD2","type":"related"},{"name":"Dimethyl:2H(4)","type":"related"}],"termid":"MOD:00552"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: PBO:0078805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 22-1","termid":"PBO:0078805"}


id: GO:0061840
data:
  {"annotated_genes":["SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89027],"is_not":false,"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:bhm","PMID:9413439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrous iron transmembrane transporter activity","termid":"GO:0015093"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04675":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity ferrous iron transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity ferrous uptake transmembrane transporter activity","type":"exact"},{"name":"high-affinity ferrous iron uptake transmembrane transporter activity","type":"exact"}],"termid":"GO:0061840","terms_by_termid":{"GO:0061840":null}}


id: PBO:0078211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-4","termid":"PBO:0078211"}


id: PBO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of WASP-Arp23 complex; involved in endocytic site formation; directly inhibits Las17p stimulation of Arp23 complex-mediated actin assembly in vitro; may regulate assembly and disassembly of the septin ring; colocalizes and interacts with septin subunits; potential role in actin cytoskeletal organization","termid":"PBO:0085011"}


id: PBO:0012536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_maturation_of","termid":"PBO:0012536"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: GO:0006851
data:
  {"annotated_genes":["SJAG_03873","SJAG_03399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92204,93926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"The process in which a calcium ion (Ca2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03399":null,"SJAG_03873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial calcium transport","type":"exact"}],"termid":"GO:0006851","terms_by_termid":{"GO:0036444":null}}


id: PBO:0036518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit, peloto ortholog Dom34 (predicted)","termid":"PBO:0036518"}


id: PBO:0084502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for prospore membrane morphogenesis; required for the proper shape of the prospore membrane (PSM) and for spore wall formation; functions cooperatively with SPO71 in PSM elongation; physically interacts with Spo71p; genetically antagonistic to SPO1, similar to SPO71; localizes to the PSM; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis; dysferlin domain-only protein","termid":"PBO:0084502"}


id: GO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential depolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential depolarization","type":"narrow"}],"termid":"GO:0086041"}


id: PBO:0049308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 3, pseudogene","termid":"PBO:0049308"}


id: MOD:00212
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["Unimod:407","PubMed:7981196","PubMed:7947803","RESID:AA0207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-4-hydroxycinnamyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"Hydroxycinnamyl","type":"related"},{"name":"MOD_RES S-(4-hydroxycinnamyl)cysteine","type":"exact"},{"name":"S-4-hydroxycinnamyl-L-cysteine","type":"exact"},{"name":"S-para-coumaryl-L-cysteine","type":"exact"},{"name":"cinnamate cysteine thioester","type":"exact"},{"name":"hydroxycinnamyl","type":"related"}],"termid":"MOD:00212"}


id: GO:0006496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal N-glycosylation (obsolete GO:0006496)","synonyms":[{"name":"protein amino acid terminal N-glycosylation","type":"exact"}],"termid":"GO:0006496"}


id: FYPO:0007547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization to the portion of the nuclear envelope enclosing the mitotic nuclear bridge is abnormal, resulting in an abnormal distribution of nuclear pores in the bridge envelope. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase. Normally, nuclear pores that lack baskets are found in the midzone of the nuclear bridge.","definition_xrefs":["PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization during mitosis","termid":"FYPO:0003783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear pore localization to mitotic nuclear bridge midzone membrane","synonyms":[{"name":"abnormal NPC localization to mitotic nuclear bridge midzone membrane","type":"exact"},{"name":"abnormal distribution of nuclear pores at nuclear bridge midzone membrane domain","type":"exact"},{"name":"abnormal nuclear pore complex localization to mitotic nuclear bridge midzone membrane","type":"exact"},{"name":"abnormal nuclear pore distribution in mitotic nuclear bridge midzone membrane","type":"exact"},{"name":"abnormal nuclear pore distribution in mitotic nuclear bridge midzone membrane domain","type":"exact"},{"name":"abnormal nuclear pore localization to mitotic nuclear bridge midzone membrane during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear pore localization to mitotic nuclear bridge midzone membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0007547"}


id: GO:0006312
data:
  {"annotated_genes":["SJAG_02828","SJAG_02079","SJAG_02339","SJAG_01419","SJAG_02724","SJAG_05105","SJAG_01076","SJAG_02460","SJAG_01601","SJAG_02267","SJAG_01495","SJAG_00247","SJAG_05173","SJAG_06642","SJAG_03898","SJAG_00640","SJAG_04530","SJAG_00757","SJAG_01410","SJAG_02556","SJAG_02226","SJAG_00995","SJAG_03221","SJAG_06597","SJAG_01677","SJAG_01832","SJAG_05353","SJAG_03097","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89251,95630,97102,98745,100411,104285],"is_not":false,"summary":null,"term":"GO:0006312"},{"annotations":[113312,85878,115261,95691,92742,84523,103160,111531,102592,105039,106826,107345,93996,97133,85750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[88749],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045951"},{"annotations":[92585],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071140"},{"annotations":[92748,108259,109459,89305,89303,89304,109461,109460,109462,85758,89306,109463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"The exchange, reciprocal or nonreciprocal, of genetic material between one DNA molecule and a homologous DNA region that occurs during mitotic cell cycles.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00640":null,"SJAG_00757":null,"SJAG_00995":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03898":null,"SJAG_04530":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05239":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"mitotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Mitotic_crossover"],"termid":"GO:0006312","terms_by_termid":{"GO:0000722":null,"GO:0006312":null,"GO:0007534":null,"GO:0045951":null,"GO:0071140":null}}


id: GO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome involved in the process of mitosis.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic chromosome (obsolete GO:0005708)","synonyms":[{"name":"mitotic chromosome","type":"exact"}],"termid":"GO:0005708"}


id: GO:0038043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-5 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-5-mediated signaling pathway","synonyms":[{"name":"IL-5-mediated signaling pathway","type":"exact"},{"name":"interleukin-5-mediated signalling pathway","type":"exact"}],"termid":"GO:0038043"}


id: FYPO:0004798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:25891897","PMID:22558440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis II","termid":"FYPO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished azygotic meiosis II","synonyms":[{"name":"abolished azygotic second meiotic nuclear division","type":"exact"},{"name":"abolished meiosis II during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004798"}


id: GO:0051660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the centrosome to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome localization","termid":"GO:0051642"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of centrosome localization","synonyms":[{"name":"centrosome positioning","type":"exact"},{"name":"establishment of centrosome localisation","type":"exact"}],"termid":"GO:0051660"}


id: PBO:0030621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maltase_activity","termid":"PBO:0030621"}


id: PBO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human B'd","termid":"PBO:0018177"}


id: PBO:0081591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 517","termid":"PBO:0081591"}


id: GO:0046979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP2 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TAP2 binding","termid":"GO:0046979"}


id: PBO:0070635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 6","termid":"PBO:0070635"}


id: PR:Q7LL00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- opt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LL00"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oligopeptide transporter C1840.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.12","synonyms":[{"name":"Spom972h-opt3","type":"exact"}],"termid":"PR:Q7LL00"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: PBO:0042907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 4","termid":"PBO:0042907"}


id: PBO:0012012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing protein, human NSRP1 ortholog","termid":"PBO:0012012"}


id: PBO:0085775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein lysine methyltransferase; monomethylates Lys-46 of the ribosomal large subunit Rpl1a/Rpl1b; member of the seven beta-strand methyltransferase superfamily; orthologs only found among fungal species","termid":"PBO:0085775"}


id: PBO:0067126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 172, pseudogene","termid":"PBO:0067126"}


id: PBO:0091413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit EtfB","termid":"PBO:0091413"}


id: PBO:0062081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 12 pseudogene","termid":"PBO:0062081"}


id: PBO:0074410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 12 pseudogene 1","termid":"PBO:0074410"}


id: PBO:0008887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0008887"}


id: GO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurite development process that generates a long process of a neuron, as it invades a target tissue.","definition_xrefs":["GOC:sart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis involved in innervation","termid":"GO:0060385"}


id: PBO:0069787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1073, pseudogene","termid":"PBO:0069787"}


id: GO:1900354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanofuran metabolic process","synonyms":[{"name":"regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900354"}


id: PBO:0053069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBH regulator of WNT signaling pathway","termid":"PBO:0053069"}


id: SO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of nucleotides that has been algorithmically derived from an alignment of two or more different sequences.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly","termid":"SO:0001248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_assembly","secondary_identifiers":["http://en.wikipedia.org/wiki/Sequence_assembly"],"synonyms":[{"name":"sequence assembly","type":"exact"}],"termid":"SO:0000353"}


id: GO:0047936
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H.","definition_xrefs":["EC:1.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glucose 1-dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-glucose dehydrogenase (NAD(P))","type":"related"},{"name":"beta-D-glucose:NAD(P)+ 1-oxidoreductase activity","type":"related"},{"name":"hexose phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0047936","terms_by_termid":{"GO:0047935":null}}


id: PBO:0070773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 3","termid":"PBO:0070773"}


id: PBO:0036262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Rna14","termid":"PBO:0036262"}


id: PBO:0085319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate (PI3P) phosphatase; involved in various protein sorting pathways, including CVT targeting and endosome to vacuole transport; has similarity to the conserved myotubularin dual specificity phosphatase family","termid":"PBO:0085319"}


id: FYPO:0005033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein phosphorylation during nitrogen starvation","synonyms":[{"name":"abnormal protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"abnormal protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"abnormal protein phosphorylation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005033"}


id: PBO:0069136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 387, pseudogene","termid":"PBO:0069136"}


id: FYPO:0005661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during nitrogen starvation","synonyms":[{"name":"increased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"increased transcription during nitrogen depletion","type":"exact"},{"name":"increased transcription during nitrogen deprivation","type":"exact"},{"name":"increased transcription during nitrogen limitation","type":"exact"},{"name":"increased transcription in response to nitrogen starvation","type":"exact"},{"name":"increased transcriptional response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005661"}


id: PBO:0028777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_and_rapamycin","termid":"PBO:0028777"}


id: PBO:0071562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 28","termid":"PBO:0071562"}


id: PBO:0040601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 5","termid":"PBO:0040601"}


id: PATO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being strong, thick or sturdy.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"robust","termid":"PATO:0002310"}


id: PBO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER unfolded protein response protein (predicted)","termid":"PBO:0003008"}


id: PBO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.10","termid":"PBO:0004485"}


id: GO:0021792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone is directed to a specific target site in response to an attractive chemical signal. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:cls","PMID:14699587","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor axon","synonyms":[{"name":"positive chemotaxis of branchiomotor axon","type":"exact"}],"termid":"GO:0021792"}


id: GO:1901877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","PMID:16432188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of calcium ion binding","termid":"GO:1901876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion binding","synonyms":[{"name":"down regulation of calcium ion binding","type":"exact"},{"name":"down regulation of calcium ion storage activity","type":"related"},{"name":"down-regulation of calcium ion binding","type":"exact"},{"name":"down-regulation of calcium ion storage activity","type":"related"},{"name":"downregulation of calcium ion binding","type":"exact"},{"name":"downregulation of calcium ion storage activity","type":"related"},{"name":"inhibition of calcium ion binding","type":"narrow"},{"name":"inhibition of calcium ion storage activity","type":"related"},{"name":"negative regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901877"}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: GO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of the activity of a caspase, a group of cysteine proteases involved in apoptosis, by the addition of a phosphate group.","definition_xrefs":["GOC:dph","PMID:14744432","Wikipedia:Caspase","GOC:tb","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of caspase activity by protein phosphorylation (obsolete GO:0008636)","synonyms":[{"name":"activation of caspase activity by protein amino acid phosphorylation","type":"exact"},{"name":"activation of caspase activity by protein phosphorylation","type":"exact"},{"name":"caspase activation via phosphorylation","type":"exact"}],"termid":"GO:0008636"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: GO:0009353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) within the mitochondrial matrix.","definition_xrefs":["GOC:mtg_sensu","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxoglutarate dehydrogenase complex (obsolete GO:0009353)","termid":"GO:0009353"}


id: GO:0045812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, calcium modulating pathway","termid":"GO:0008591"},{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"down regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"down-regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"downregulation of frizzled-2 signaling pathway","type":"exact"},{"name":"inhibition of frizzled-2 signaling pathway","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"negative regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"negative regulation of frizzled-2 signalling pathway","type":"exact"}],"termid":"GO:0045812"}


id: PBO:0049630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 33","termid":"PBO:0049630"}


id: PBO:0072894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C4-methyl oxidase pseudogene","termid":"PBO:0072894"}


id: PR:O94299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.16","synonyms":[{"name":"Spom972h-SPBC887.16","type":"exact"}],"termid":"PR:O94299"}


id: PBO:0027400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_triglyceride_biosynthetic_process","termid":"PBO:0027400"}


id: GO:0009349
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106901],"is_not":false,"summary":null,"term":"GO:0009349"}]},"cv_name":"cellular_component","definition":"An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.","definition_xrefs":["PMID:18298940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"riboflavin synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009349","terms_by_termid":{"GO:0009349":null}}


id: GO:0031396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein ubiquitination","termid":"GO:0031396"}


id: GO:0038096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["GOC:phg","PMID:15466916","PMID:12488490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","termid":"GO:0002433"},{"relation_name":"is_a","term_name":"Fc-gamma receptor signaling pathway","termid":"GO:0038094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:0038096"}


id: PBO:0091986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf23","termid":"PBO:0091986"}


id: PBO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 5","termid":"PBO:0047714"}


id: PR:O94433
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC660.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C660.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.17c","synonyms":[{"name":"Spom972h-SPBC660.17c","type":"exact"}],"termid":"PR:O94433"}


id: PBO:0109355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and heme transporter 1","termid":"PBO:0109355"}


id: GO:0031429
data:
  {"annotated_genes":["SJAG_01234","SJAG_00566","SJAG_04754","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86594,91920,97714,102813],"is_not":false,"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A box H/ACA small nucleolar ribonucleoprotein complex located in the nucleolus that catalyzes pseudouridylation of ribosomal RNA residues. The complex is composed of four different core proteins that assemble onto a H/ACA guide RNA scaffold that identifies specific uridines in rRNA for modification during ribosome synthesis.","definition_xrefs":["GOC:vw","PMID:20227365","PMID:22065625","PMID:17284456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005730","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"box H/ACA snoRNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex","type":"exact"},{"name":"box H/ACA snoRNP pseudouridylase complex","type":"exact"}],"termid":"GO:0031429","terms_by_termid":{"GO:0031429":null}}


id: GO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Leu-Xaa bond in angiotensinogen to generate angiotensin I.","definition_xrefs":["EC:3.4.23.15"],"gene_count":0,"genotype_count":0,"name":"obsolete renin activity (obsolete GO:0004195)","synonyms":[{"name":"angiotensin-forming enzyme activity","type":"related"},{"name":"angiotensinogenase activity","type":"related"},{"name":"renin activity","type":"exact"}],"termid":"GO:0004195"}


id: PBO:0069337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 597, pseudogene","termid":"PBO:0069337"}


id: GO:0102617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin B + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin B dependent) activity (obsolete GO:0102617)","termid":"GO:0102617"}


id: GO:0071742
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgE immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgE immunoglobulin complex","termid":"GO:0071742"}


id: PBO:0028889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_cell","termid":"PBO:0028889"}


id: GO:0043856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to an anti-sigma factor and stopping, preventing or reducing the rate of its activity.","definition_xrefs":["GOC:txnOH","GOC:jl","PMID:15576799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"anti-sigma factor antagonist activity","synonyms":[{"name":"anti-anti-sigma factor activity","type":"exact"}],"termid":"GO:0043856"}


id: PBO:0055731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain 7","termid":"PBO:0055731"}


id: PBO:0083476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SSH4","termid":"PBO:0083476"}


id: PBO:0048182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 3","termid":"PBO:0048182"}


id: MOD:01537
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01537"}


id: GO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of deprivation of water.","definition_xrefs":["PMID:9797333","GOC:mah","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"part_of","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolism in response to water deprivation","synonyms":[{"name":"trehalose metabolic process involved in response to water deprivation","type":"exact"}],"termid":"GO:0070416"}


id: GO:0045855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pole plasm oskar mRNA localization","termid":"GO:0007317"},{"relation_name":"is_a","term_name":"negative regulation of intracellular mRNA localization","termid":"GO:1904581"},{"relation_name":"negatively_regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"down regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"down-regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"downregulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"inhibition of pole plasm oskar mRNA localization","type":"narrow"},{"name":"negative regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"negative regulation of pole plasm oskar mRNA localisation","type":"exact"}],"termid":"GO:0045855"}


id: PBO:0028691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_organization","termid":"PBO:0028691"}


id: FYPO:0000953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to a chemical stimulus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to chemical stimulus","termid":"FYPO:0000953"}


id: PBO:0056148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 3","termid":"PBO:0056148"}


id: PATO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tendency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"tendency","termid":"PATO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tendency","termid":"PATO:0002362"}


id: GO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.","definition_xrefs":["GOC:mah","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:28042","KEGG_REACTION:R00209","MetaCyc:PYRUVDEH-RXN","EC:1.2.1.104"],"termid":"GO:0034604"}


id: GO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic group such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate.","definition_xrefs":["PMID:19635802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glycolipid binding","termid":"GO:0051861"}


id: PBO:0029031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere","termid":"PBO:0029031"}


id: GO:1902923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:21705209","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"},{"relation_name":"is_a","term_name":"poly(3-hydroxyvalerate) metabolic process","termid":"GO:1902922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(3-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(3-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyvalerate) formation","type":"exact"},{"name":"poly(3-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902923"}


id: PBO:0064718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 54","termid":"PBO:0064718"}


id: GO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.","definition_xrefs":["PMID:17517611","PMID:22343722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"magnesium-dependent protein serine/threonine phosphatase complex","termid":"GO:0005963"}


id: GO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconal = versicolorin B + H2O.","definition_xrefs":["MetaCyc:RXN-9494","PMID:8784203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"versicolorin B synthase activity","secondary_identifiers":["EC:4.2.1.143","RHEA:33859"],"termid":"GO:0046572"}


id: PBO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 33","termid":"PBO:0060045"}


id: PBO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like B","termid":"PBO:0061259"}


id: PBO:0065973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 homolog B","termid":"PBO:0065973"}


id: GO:0008236
data:
  {"annotated_genes":["SJAG_01868","SJAG_04785","SJAG_03258","SJAG_05286","SJAG_02432","SJAG_02565","SJAG_03261","SJAG_00984","SJAG_03121","SJAG_04819","SJAG_01285","SJAG_00975","SJAG_04928","SJAG_00737","SJAG_03910","SJAG_04398","SJAG_03648","SJAG_02809","SJAG_01136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85724],"is_not":false,"summary":null,"term":"GO:0008236"},{"annotations":[100935,84800,88394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[100369,84077,104605,94207,100362,89846,97847,105725,88189,90736,99621,114943,109924,101368,89755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[97848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"serine hydrolase activity","termid":"GO:0017171"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"serine-type peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2022383","Reactome:R-HSA-9839072","Reactome:R-HSA-9839110","Reactome:R-HSA-3132753","Reactome:R-HSA-6801766","Reactome:R-HSA-1461993"],"synonyms":[{"name":"serine protease activity","type":"narrow"}],"termid":"GO:0008236","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null}}


id: GO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lambdoid suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lambdoid suture morphogenesis","termid":"GO:0060366"}


id: FYPO:0002149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and elongated in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell population (obsolete FYPO:0002149)","termid":"FYPO:0002149"}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: PBO:0003336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2 (predicted)","termid":"PBO:0003336"}


id: PBO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rhp51","termid":"PBO:0001681"}


id: PBO:0087017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide reductase inhibitor; intrinsically disordered protein that binds to and inhibits Rnr2p; involved in the Mec1p-mediated checkpoint pathway; transcription is induced by genotoxic stress and by activation of the Rad53p pathway; protein abundance increases in response to DNA replication stress","termid":"PBO:0087017"}


id: PBO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 2","termid":"PBO:0044859"}


id: PBO:0043337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN6 transmembrane ER protein","termid":"PBO:0043337"}


id: PBO:0058869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9902-1","termid":"PBO:0058869"}


id: PBO:0056632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 12","termid":"PBO:0056632"}


id: PBO:0088385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","termid":"PBO:0088385"}


id: RO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance added\\\" is a relation existing between a (physical) entity and a substance in which the entity has had the substance added to it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_added","termid":"RO:0009001"}


id: PBO:0059151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 3","termid":"PBO:0059151"}


id: GO:0016741
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id: GO:0015414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nitrate(out) = ADP + phosphate + nitrate(in).","definition_xrefs":["RHEA:13181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type nitrate transporter activity","secondary_identifiers":["MetaCyc:3.6.3.26-RXN","EC:7.3.2.4"],"synonyms":[{"name":"ATPase-coupled nitrate transmembrane transporter activity","type":"related"},{"name":"nitrate ABC transporter","type":"exact"},{"name":"nitrate transmembrane-transporting ATPase activity","type":"related"},{"name":"nitrate transporting ATPase activity","type":"related"},{"name":"nitrate-transporting ATPase activity","type":"related"}],"termid":"GO:0015414"}


id: PBO:0044254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19 like cell cycle control factor 2","termid":"PBO:0044254"}


id: FYPO:0000555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"abnormal recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: abnormal","type":"related"}],"termid":"FYPO:0000555"}


id: GO:0033133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucokinase activity","termid":"GO:0033131"},{"relation_name":"is_a","term_name":"positive regulation of hexokinase activity","termid":"GO:1903301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucokinase activity","synonyms":[{"name":"glucokinase activator","type":"narrow"},{"name":"stimulation of glucokinase activity","type":"narrow"},{"name":"up regulation of glucokinase activity","type":"exact"},{"name":"up-regulation of glucokinase activity","type":"exact"},{"name":"upregulation of glucokinase activity","type":"exact"}],"termid":"GO:0033133"}


id: SO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000115 transcript_feature (obsolete SO:0000115)","termid":"SO:0000115"}


id: GO:0018622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorophenylacetate + NADH + O2 = 3,4-dihydroxyphenylacetate + chloride + NAD+.","definition_xrefs":["EC:1.14.12.9","RHEA:14689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-chlorophenylacetate 3,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03306","MetaCyc:1.14.12.9-RXN","UM-BBD_reactionID:r0308"],"synonyms":[{"name":"4-chlorophenylacetate,NADH:oxygen oxidoreductase (3,4-hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018622"}


id: GO:0102595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-glucoside-7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3-O-glucoside-7-O-(6-O-(4-O-(6-O-(p-hydroxybenzoyl)-glucosyl)-oxybenzoyl)-glucoside) + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 7-O-(6-O-(4-O-(glucosyl)-oxybenzoyl)-glucoside) acyltransferase (acyl-glucose dependent) activity (obsolete GO:0102595)","termid":"GO:0102595"}


id: GO:1903301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexokinase activity.","definition_xrefs":["PMID:15804508","GOC:TermGenie","GO_REF:0000059","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexokinase activity","synonyms":[{"name":"activation of ATP-dependent hexokinase activity","type":"narrow"},{"name":"activation of ATP:D-hexose 6-phosphotransferase activity","type":"narrow"},{"name":"activation of glucose ATP phosphotransferase activity","type":"narrow"},{"name":"activation of hexokinase (phosphorylating)","type":"narrow"},{"name":"activation of hexokinase D","type":"related"},{"name":"activation of hexokinase activity","type":"narrow"},{"name":"activation of hexokinase type I activity","type":"narrow"},{"name":"activation of hexokinase type II activity","type":"narrow"},{"name":"activation of hexokinase type III activity","type":"narrow"},{"name":"activation of hexokinase type IV","type":"related"},{"name":"activation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"activation of hexokinase type IV glucokinase activity","type":"narrow"},{"name":"positive regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"positive regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"positive regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"positive regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"positive regulation of hexokinase D","type":"related"},{"name":"positive regulation of hexokinase type I activity","type":"narrow"},{"name":"positive regulation of hexokinase type II activity","type":"narrow"},{"name":"positive regulation of hexokinase type III activity","type":"narrow"},{"name":"positive regulation of hexokinase type IV","type":"related"},{"name":"positive regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"positive regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"up regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"up regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"up regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"up regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"up regulation of hexokinase D","type":"related"},{"name":"up regulation of hexokinase activity","type":"exact"},{"name":"up regulation of hexokinase type I activity","type":"narrow"},{"name":"up regulation of hexokinase type II activity","type":"narrow"},{"name":"up regulation of hexokinase type III activity","type":"narrow"},{"name":"up regulation of hexokinase type IV","type":"related"},{"name":"up regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"up regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"up-regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"up-regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"up-regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"up-regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"up-regulation of hexokinase D","type":"related"},{"name":"up-regulation of hexokinase activity","type":"exact"},{"name":"up-regulation of hexokinase type I activity","type":"narrow"},{"name":"up-regulation of hexokinase type II activity","type":"narrow"},{"name":"up-regulation of hexokinase type III activity","type":"narrow"},{"name":"up-regulation of hexokinase type IV","type":"related"},{"name":"up-regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"up-regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"upregulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"upregulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"upregulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"upregulation of hexokinase (phosphorylating)","type":"exact"},{"name":"upregulation of hexokinase D","type":"related"},{"name":"upregulation of hexokinase activity","type":"exact"},{"name":"upregulation of hexokinase type I activity","type":"narrow"},{"name":"upregulation of hexokinase type II activity","type":"narrow"},{"name":"upregulation of hexokinase type III activity","type":"narrow"},{"name":"upregulation of hexokinase type IV","type":"related"},{"name":"upregulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"upregulation of hexokinase type IV glucokinase activity","type":"exact"}],"termid":"GO:1903301"}


id: FYPO:0007606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the breakdown of DNA occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA degradation during nitrogen starvation","synonyms":[{"name":"decreased DNA catabolic process during nitrogen starvation","type":"exact"},{"name":"decreased DNA catabolism during nitrogen starvation","type":"exact"},{"name":"decreased DNA degradation during nitrogen depletion","type":"exact"},{"name":"decreased DNA degradation during nitrogen deprivation","type":"exact"},{"name":"reduced DNA degradation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007606"}


id: GO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorylation","synonyms":[{"name":"activation of phosphorylation","type":"narrow"},{"name":"stimulation of phosphorylation","type":"narrow"},{"name":"up regulation of phosphorylation","type":"exact"},{"name":"up-regulation of phosphorylation","type":"exact"},{"name":"upregulation of phosphorylation","type":"exact"}],"termid":"GO:0042327"}


id: GO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome integral membrane receptor (obsolete GO:0005054)","synonyms":[{"name":"Pas20p","type":"related"},{"name":"peroxisome integral membrane receptor","type":"exact"}],"termid":"GO:0005054"}


id: FYPO:0002626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to heat","synonyms":[{"name":"heat resistance","type":"exact"},{"name":"increased growth during cellular response to heat","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to heat","type":"exact"},{"name":"resistance to heat during mitotic cell cycle","type":"related"},{"name":"resistance to heat during vegetative growth","type":"exact"},{"name":"resistance to high temperature","type":"exact"},{"name":"resistant to heat","type":"exact"}],"termid":"FYPO:0002626"}


id: GO:0019932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any intracellular signal transduction in which the signal is passed on within the cell via a second messenger; a small molecule or ion that can be quickly generated or released from intracellular stores, and can diffuse within the cell. Second-messenger signaling includes production or release of the second messenger, and effectors downstream of the second messenger that further transmit the signal within the cell.","definition_xrefs":["PMID:15221855","ISBN:0815316194","Wikipedia:Second_messenger_system","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete second-messenger-mediated signaling (obsolete GO:0019932)","synonyms":[{"name":"second messenger mediated signaling","type":"exact"},{"name":"second messenger mediated signalling","type":"exact"},{"name":"second messenger-mediated signaling","type":"exact"},{"name":"second messenger-mediated signalling","type":"exact"},{"name":"second-messenger-mediated signal transduction","type":"exact"},{"name":"second-messenger-mediated signalling","type":"exact"}],"termid":"GO:0019932"}


id: PBO:0076266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex interacting GAS6 enhancer non-coding RNA","termid":"PBO:0076266"}


id: GO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the plasma membrane of the sperm. This membrane fuses with the sperm plasma membrane as part of the acrosome reaction.","definition_xrefs":["GOC:dph","PMID:8936405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"outer acrosomal membrane","termid":"GO:0002081"}


id: GO:0050919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a lower concentration of a chemical.","definition_xrefs":["GOC:bf","GOC:ai","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative chemotaxis","synonyms":[{"name":"chemoaversion","type":"exact"},{"name":"chemorepulsion","type":"exact"}],"termid":"GO:0050919"}


id: GO:0052132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near host (obsolete GO:0052132)","termid":"GO:0052132"}


id: PBO:0090367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog","termid":"PBO:0090367"}


id: PBO:0090864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPAC664.13 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090864"}


id: GO:0070523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD+ = an 11-oxosteroid + NADH + H+.","definition_xrefs":["PMID:15761036","RHEA:53116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NAD+) activity","secondary_identifiers":["Wikipedia:11beta-hydroxysteroid_dehydrogenase"],"termid":"GO:0070523"}


id: GO:0046824
data:
  {"annotated_genes":["SJAG_01245","SJAG_04464","SJAG_04312","SJAG_03048","SJAG_02592","SJAG_03453","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107535,90376,96995,98404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[87432,98935,90945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"positively_regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleocytoplasmic transport","type":"narrow"},{"name":"stimulation of nucleocytoplasmic transport","type":"narrow"},{"name":"up regulation of nucleocytoplasmic transport","type":"exact"},{"name":"up-regulation of nucleocytoplasmic transport","type":"exact"},{"name":"upregulation of nucleocytoplasmic transport","type":"exact"}],"termid":"GO:0046824","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: GO:0021893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a neuroblast becomes restricted such that it will develop into a GABAergic interneuron residing in the cerebral cortex.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GOC:dph","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"cerebral cortex GABAergic interneuron differentiation","termid":"GO:0021892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex GABAergic interneuron fate commitment","termid":"GO:0021893"}


id: GO:0031852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mu-type opioid receptor.","definition_xrefs":["GOC:sl","GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"mu-type opioid receptor binding","synonyms":[{"name":"morphine receptor binding","type":"related"},{"name":"mu-type opioid receptor ligand","type":"narrow"}],"termid":"GO:0031852"}


id: GO:0017136
data:
  {"annotated_genes":["SJAG_01075","SJAG_04039","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100737,110932,86640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[100738,86641,110933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097372"},{"annotations":[110934,86642,100739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[86643,100740,110935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[110936,86644,100741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[110937,100742,86645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[histone] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group from a histone to NAD, producing nicotinamide.","definition_xrefs":["PMID:24691964","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0033558","GO:0003824","GO:0016746","GO:0003674","GO:0140096","GO:0019213"],"is_obsolete":false,"name":"histone deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone lysine deacetylase activity","type":"exact"},{"name":"SIR2","type":"related"},{"name":"histone deacetylase activity","type":"broad"},{"name":"sirtuin","type":"narrow"}],"termid":"GO:0017136","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0097372":null,"GO:0140765":null,"GO:0141222":null}}


id: PATO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mass density","synonyms":[{"name":"density","type":"related"}],"termid":"PATO:0001019"}


id: GO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory tube development","termid":"GO:0030323"}


id: FYPO:0009040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tea tree oil than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to tea tree oil","synonyms":[{"name":"resistance to tea tree oil during mitotic cell cycle","type":"related"},{"name":"resistance to tea tree oil during vegetative growth","type":"exact"},{"name":"resistant to tea tree oil","type":"exact"}],"termid":"FYPO:0009040"}


id: GO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052491)","synonyms":[{"name":"negative regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"negative regulation of symbiont SA-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"suppression of symbiont SA mediated defense response","type":"exact"}],"termid":"GO:0052491"}


id: GO:0097519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of a higher-order oligomer of strand exchange proteins (recombinases) on single-stranded DNA.","definition_xrefs":["PMID:10357855","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA recombinase complex","termid":"GO:0097519"}


id: PBO:0060602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit G pseudogene 2","termid":"PBO:0060602"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00884","SJAG_00857","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102948,103772,111782],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["PMID:9305914","PMID:10770926","GOC:mah","PMID:15007098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: PATO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal","synonyms":[{"name":"aberrant","type":"related"},{"name":"atypia","type":"related"},{"name":"atypical","type":"related"},{"name":"defective","type":"related"}],"termid":"PATO:0000460"}


id: PBO:0068988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 232, pseudogene","termid":"PBO:0068988"}


id: PBO:0077735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS2 antisense RNA 1","termid":"PBO:0077735"}


id: PBO:0091085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1","termid":"PBO:0091085"}


id: GO:0071785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) cisternal network in a stable functional or structural state. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:20434336","PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network maintenance","synonyms":[{"name":"ER cisternal network maintenance","type":"exact"}],"termid":"GO:0071785"}


id: GO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["GOC:txnOH","PMID:15020047","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex remodeling","termid":"GO:0001120"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"DNA-templated transcription open complex formation","secondary_identifiers":["GO:0001127"],"synonyms":[{"name":"DNA-dependent transcriptional open complex formation","type":"exact"},{"name":"DNA-templated transcriptional open complex formation","type":"exact"},{"name":"promoter melting","type":"broad"},{"name":"transcription open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcriptional open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001112"}


