# terms

id: PBO:0034661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034661"}


id: PBO:0013078
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisC","termid":"PBO:0013078"}


id: PBO:0039905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 7","termid":"PBO:0039905"}


id: PBO:0065328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 52, pseudogene","termid":"PBO:0065328"}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: PBO:0089147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17","termid":"PBO:0089147"}


id: GO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the epidermis.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoderm histogenesis","termid":"GO:0010068"}


id: GO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa, Lys-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trypsin activity (obsolete GO:0004295)","synonyms":[{"name":"beta-trypsin activity","type":"narrow"},{"name":"cocoonase activity","type":"related"},{"name":"parenzyme","type":"related"},{"name":"parenzymol","type":"related"},{"name":"pseudotrypsin","type":"related"},{"name":"alpha-trypsin activity","type":"narrow"},{"name":"sperm receptor hydrolase activity","type":"related"},{"name":"tripcellim","type":"related"},{"name":"trypsin activity","type":"exact"},{"name":"tryptar","type":"related"},{"name":"trypure","type":"related"}],"termid":"GO:0004295"}


id: GO:1903395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["GOC:di","PMID:23878277","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"}


id: PBO:0064867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R26 antisense RNA 1","termid":"PBO:0064867"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: PBO:0038343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_on_by","termid":"PBO:0038343"}


id: PBO:0068299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5 pseudogene 1","termid":"PBO:0068299"}


id: GO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte differentiation","termid":"GO:0002062"}


id: GO:1901639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of XDP.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP catabolic process (obsolete GO:1901639)","synonyms":[{"name":"XDP breakdown","type":"exact"},{"name":"XDP catabolism","type":"exact"},{"name":"XDP degradation","type":"exact"}],"termid":"GO:1901639"}


id: FYPO:0003776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased pseudohyphal growth","synonyms":[{"name":"increased filamentous growth","type":"broad"}],"termid":"FYPO:0003776"}


id: PBO:0044943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrodiol dehydrogenase","termid":"PBO:0044943"}


id: PBO:0063210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP3 antisense RNA 1","termid":"PBO:0063210"}


id: PBO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup131","termid":"PBO:0003411"}


id: GO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate metabolic process (obsolete GO:0044262)","synonyms":[{"name":"cellular carbohydrate metabolism","type":"exact"},{"name":"main pathways of carbohydrate metabolic process","type":"narrow"},{"name":"main pathways of carbohydrate metabolism","type":"narrow"}],"termid":"GO:0044262"}


id: GO:0032879
data:
  {"annotated_genes":["SJAG_03048","SJAG_00883","SJAG_04509","SJAG_03970","SJAG_03581","SJAG_01373","SJAG_00845","SJAG_00402","SJAG_03987","SJAG_00321","SJAG_04597","SJAG_03763","SJAG_05346","SJAG_00991","SJAG_02392","SJAG_04140","SJAG_01245","SJAG_03602","SJAG_02684","SJAG_01805","SJAG_02605","SJAG_04920","SJAG_04312","SJAG_04465","SJAG_00296","SJAG_02592","SJAG_03591","SJAG_03631","SJAG_00649","SJAG_01837","SJAG_04464","SJAG_00514","SJAG_04666","SJAG_04343","SJAG_03126","SJAG_01166","SJAG_03268","SJAG_04990","SJAG_02645","SJAG_02074","SJAG_04280","SJAG_00661","SJAG_02419","SJAG_02366","SJAG_01311","SJAG_01084","SJAG_05290","SJAG_04551","SJAG_04052","SJAG_04469","SJAG_03850","SJAG_00082","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[109871,87795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[91150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[84679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[84680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[98921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904537"},{"annotations":[102341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[87542,92422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[90982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[103766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[110983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[92423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[84681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[112519,108484,101706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[98696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[100244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045807"},{"annotations":[96732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[86513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[95447,107061,89900,88314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[95448,89901,88315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[107727,98932,86585,113190,90375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[90987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[107535,98404,90376,96995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[98935,90945,87432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[95004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[108193,115356,107544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"},{"annotations":[84489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[99478,109874,86458,89282,109747,77720,89000,76683,87543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030100"},{"annotations":[108172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[90416,94973,84492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"},{"annotations":[84493,88591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[95962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[102920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"},{"annotations":[104484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"},{"annotations":[99867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905634"},{"annotations":[110133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000156"},{"annotations":[88592,84494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060627"},{"annotations":[72008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[105194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any process in which a cell, a substance, or a cellular entity is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological 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of localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of localisation","type":"exact"}],"termid":"GO:0032879","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0033157":null,"GO:0035432":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:0045807":null,"GO:0045921":null,"GO:0046827":null,"GO:0051209":null,"GO:0060627":null,"GO:0060628":null,"GO:0061454":null,"GO:0120047":null,"GO:0140325":null,"GO:0140429":null,"GO:1900181":null,"GO:1902267":null,"GO:1902424":null,"GO:1902425":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1904537":null,"GO:1905391":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905634":null,"GO:1905665":null,"GO:1905949":null,"GO:2000156":null,"GO:2000185":null,"GO:2000369":null,"GO:2001135":null}}


id: GO:1902483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pyroptotic cell death process that occurs in a cytotoxic T cell.","definition_xrefs":["PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyroptotic cell death","termid":"GO:0141201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell pyroptotic cell death","synonyms":[{"name":"cytotoxic T cell apoptosis","type":"related"},{"name":"cytotoxic T cell apoptotic process","type":"related"},{"name":"cytotoxic T cell pyroptotic process","type":"broad"},{"name":"cytotoxic T lymphocyte apoptotic process","type":"related"},{"name":"cytotoxic T-cell apoptosis","type":"related"},{"name":"cytotoxic T-cell programmed cell death","type":"related"}],"termid":"GO:1902483"}


id: SO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter region of RNA polymerase III type 1 promoters.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate_element","synonyms":[{"name":"IE","type":"exact"},{"name":"intermediate element","type":"related"}],"termid":"SO:0001677"}


id: PBO:0082080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' exoribonuclease required for 5' end processing of pre-60S rRNA; binds late pre-60S ribosomes, accompanying them from nucleolus to nuclear periphery; required for cell viability under standard (aerobic) conditions but not under anaerobic conditions; yeast null mutant is complemented by expression of human homolog NOL12","termid":"PBO:0082080"}


id: PR:Q9UT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug28 gene.","definition_xrefs":["UniProtKB:Q9UT83","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 28 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.07","synonyms":[{"name":"Spom972h-mug28","type":"exact"}],"termid":"PR:Q9UT83"}


id: PBO:0042468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 5","termid":"PBO:0042468"}


id: PBO:0079782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A3","termid":"PBO:0079782"}


id: PBO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-W","termid":"PBO:0002626"}


id: PBO:0038916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRF5 antisense RNA 1","termid":"PBO:0038916"}


id: GO:0060580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron regardless of its environment; upon determination, the cell fate cannot be reversed. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"is_a","term_name":"cell fate determination involved in pattern specification","termid":"GO:0060582"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron fate determination","termid":"GO:0060580"}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: PBO:0066272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member F","termid":"PBO:0066272"}


id: GO:0014866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"skeletal myofibril assembly","termid":"GO:0014866"}


id: GO:0070049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 2 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-2 complex","synonyms":[{"name":"SNARE complex (Stx2, Snap25, Vamp8)","type":"narrow"},{"name":"Stx2-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070049"}


id: GO:0035429
data:
  {"annotated_genes":["SJAG_04905","SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[86513],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The process in which gluconate is transported across a membrane. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["GOC:vw","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04905":null,"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015725"],"synonyms":[{"name":"gluconate membrane transport","type":"exact"},{"name":"gluconate transport","type":"related"}],"termid":"GO:0035429","terms_by_termid":{"GO:0035432":null,"GO:0140270":null}}


id: PR:O14399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.08c","synonyms":[{"name":"Spom972h-ned8","type":"exact"}],"termid":"PR:O14399"}


id: PBO:0085337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication","termid":"PBO:0085337"}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: PBO:0066053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C, member of RAS oncogene family","termid":"PBO:0066053"}


id: PBO:0084391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low complexity protein; mediates inhibition of Mep1p and Mep3p activity; hyperphosphorylated upon rapamycin treatment in a Tap42p-dependent manner; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylation and localization regulated by TORC1-effector kinase, Npr1p","termid":"PBO:0084391"}


id: PBO:0031055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_metaphase/anaphase_transition_delay","termid":"PBO:0031055"}


id: PBO:0034388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pseudoparalogy_relationship_with","termid":"PBO:0034388"}


id: PBO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035802"}


id: PBO:0043262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 20","termid":"PBO:0043262"}


id: PBO:0063625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 1","termid":"PBO:0063625"}


id: PBO:0058412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4781","termid":"PBO:0058412"}


id: PBO:0086493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphatidylinositol/phosphatidylcholine transfer protein; possibly involved in lipid metabolism; localizes to the nucleus; contains a CRAL/TRIO domain and binds several lipids in a large-scale study; YKL091C has a paralog, SEC14, that arose from the whole genome duplication","termid":"PBO:0086493"}


id: PBO:0089105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation protein Mtf2","termid":"PBO:0089105"}


id: FYPO:0008202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid separation occurs in meiosis I due to erroneous merotelic kinetochore attachment.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"equational sister chromatid separation at meiosis I","termid":"FYPO:0008202"}


id: PBO:0056531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCC regulator of WNT signaling pathway","termid":"PBO:0056531"}


id: FYPO:0000280
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115677,115683,115684,115688,115691,115693,115694,115707,115709,115925],"is_not":false,"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abolished biological 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abolished","type":"exact"},{"name":"zygote formation abolished","type":"related"}],"termid":"FYPO:0000280","terms_by_termid":{"FYECO:0000272":null,"FYPO:0000280":null,"FYPO_EXT:0000001":null}}


id: GO:1902567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"negatively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil activation","synonyms":[{"name":"down regulation of eosinophil activation","type":"exact"},{"name":"down-regulation of eosinophil activation","type":"exact"},{"name":"downregulation of eosinophil activation","type":"exact"},{"name":"inhibition of eosinophil activation","type":"narrow"}],"termid":"GO:1902567"}


id: PBO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 11","termid":"PBO:0062131"}


id: GO:0006800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:jl","PMID:12115731"],"gene_count":0,"genotype_count":0,"name":"obsolete oxygen and reactive oxygen species metabolic process (obsolete GO:0006800)","synonyms":[{"name":"oxygen and AOS metabolism","type":"exact"},{"name":"oxygen and ROI metabolism","type":"exact"},{"name":"oxygen and ROS metabolic process","type":"exact"},{"name":"oxygen and ROS metabolism","type":"exact"},{"name":"oxygen and active oxygen species metabolism","type":"exact"},{"name":"oxygen and reactive oxidative species metabolism","type":"exact"},{"name":"oxygen and reactive oxygen intermediate metabolism","type":"exact"},{"name":"oxygen and reactive oxygen species metabolic process","type":"exact"},{"name":"oxygen and reactive oxygen species metabolism","type":"exact"}],"termid":"GO:0006800"}


id: GO:1905600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905600"}


id: PBO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 1","termid":"PBO:0043327"}


id: GO:1903907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"negatively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of plasma membrane raft polarization","synonyms":[{"name":"down regulation of plasma membrane raft polarization","type":"exact"},{"name":"down-regulation of plasma membrane raft polarization","type":"exact"},{"name":"downregulation of plasma membrane raft polarization","type":"exact"},{"name":"inhibition of plasma membrane raft polarization","type":"narrow"}],"termid":"GO:1903907"}


id: PBO:0066092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4","termid":"PBO:0066092"}


id: PBO:0110368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L2","termid":"PBO:0110368"}


id: GO:0010301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + xanthoxin = (+)-abscisic aldehyde + H+ + NADH.","definition_xrefs":["EC:1.1.1.288","RHEA:12548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"xanthoxin dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R06954","MetaCyc:1.1.1.288-RXN","GO:0033710"],"synonyms":[{"name":"ABA2","type":"related"},{"name":"xanthoxin dehydrogenase activity","type":"broad"},{"name":"xanthoxin oxidase activity","type":"related"},{"name":"xanthoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0010301"}


id: FYPO:0005575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires magnesium ions in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for magnesium","synonyms":[{"name":"growth auxotrophic for magnesium during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for magnesium during vegetative growth","type":"exact"},{"name":"growth auxotrophic for magnesium ion","type":"exact"},{"name":"magnesium auxotrophy","type":"exact"}],"termid":"FYPO:0005575"}


id: PBO:0035900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_heat_shock","termid":"PBO:0035900"}


id: PBO:0059137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 4","termid":"PBO:0059137"}


id: PBO:0072312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 9","termid":"PBO:0072312"}


id: GO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism cell (obsolete GO:0044216)","termid":"GO:0044216"}


id: GO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside catabolic process","termid":"GO:0046121"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside degradation","type":"exact"}],"termid":"GO:0046127"}


id: GO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of apoptosis.","definition_xrefs":["GOC:tb","GOC:signaling","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apoptosis by sphingosine-1-phosphate signaling pathway (obsolete GO:0003377)","synonyms":[{"name":"regulation of apoptosis by sphingolipid signaling pathway","type":"broad"},{"name":"regulation of apoptosis by sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003377"}


id: _global:enabled_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","secondary_identifiers":["RO:0002333"],"termid":"_global:enabled_by"}


id: PBO:0040296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase plasma membrane Ca2+ transporting 1","termid":"PBO:0040296"}


id: PBO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C15","termid":"PBO:0045227"}


id: MOD:00170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:2341397","RESID:AA0161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIGly","type":"exact"},{"name":"LIPID GPI-anchor amidated glycine","type":"exact"},{"name":"N-glycyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00170"}


id: PBO:0091700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase","termid":"PBO:0091700"}


id: GO:0140101
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id: PBO:0066832
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id: GO:0000349
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id: PBO:0043954
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id: PR:Q09813
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf111 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID 111 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.14","synonyms":[{"name":"Spom972h-taf111","type":"exact"},{"name":"TAFII-111 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 111 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09813"}


id: FYECO:0000381
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id: PBO:0001358
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id: GO:0046721
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id: PBO:0003129
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: MOD:01477
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 3'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-fluoro-L-phenylalanine","synonyms":[{"name":"3-fluorophenylalanine","type":"exact"},{"name":"m-fluorophenylalanine","type":"exact"},{"name":"meta-fluorophenylalanine","type":"exact"}],"termid":"MOD:01477"}


id: GO:0004344
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + acceptor = D-glucono-1,5-lactone + reduced acceptor.","definition_xrefs":["PMID:22027299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glucose dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:24540","EC:1.1.99.35","GO:0008708"],"synonyms":[{"name":"glucose dehydrogenase (acceptor) activity","type":"exact"},{"name":"soluble glucose dehydrogenase","type":"exact"}],"termid":"GO:0004344","terms_by_termid":{"GO:0047935":null}}


id: FYPO:0006965
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id: GO:0035299
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id: FYPO:0003327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"curved microtubules","termid":"FYPO:0004862"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"curved interphase microtubules","synonyms":[{"name":"curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"curved interphase cytoplasmic microtubules","type":"exact"},{"name":"curved interphase microtubules during mitotic cell cycle","type":"related"},{"name":"curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003327"}


id: PBO:0055347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2775","termid":"PBO:0055347"}


id: SO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified isoleucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_isoleucine","secondary_identifiers":["MOD:00910"],"synonyms":[{"name":"ModIle","type":"exact"},{"name":"modified L isoleucine","type":"exact"},{"name":"modified L-isoleucine","type":"exact"}],"termid":"SO:0001396"}


id: FYPO:0003135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type normally (i.e. agglutination is indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal agglutination","synonyms":[{"name":"normal agglutination involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0003135"}


id: GO:0106158
data:
  {"annotated_genes":["SJAG_03154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108510],"is_not":false,"summary":null,"term":"GO:0106158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:acyl-CoA + glycerophosphocholine = CoA + 1-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:18430972","PMID:27758859","RHEA:58476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycero-3-phosphocholine acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPACT activity","type":"exact"},{"name":"glycerophosphocholine O-acyltransferase activity","type":"exact"}],"termid":"GO:0106158","terms_by_termid":{"GO:0106158":null}}


id: GO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal 1,4-beta-linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, exochitinases progressively cleave off two subunits from the reducing or non-reducing ends of the chitin chain.","definition_xrefs":["GOC:bf","GOC:kah","GOC:pde","PMID:16298970","PMID:11468293","PMID:21390509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"exochitinase activity","secondary_identifiers":["MetaCyc:RXN-12309","RHEA:50672"],"termid":"GO:0035885"}


id: PBO:0080648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat, sterile alpha motif and U-box domain containing 1","termid":"PBO:0080648"}


id: GO:0120097
data:
  {"annotated_genes":["SJAG_06425","SJAG_00295"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86136,87801],"is_not":false,"summary":null,"term":"GO:0120097"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the second mannose to the glycosylphosphatidylinositol (GPI) during GPI precursor assembly. In yeast S. cerevisiae this complex consists of GPI18p and PGA1p.","definition_xrefs":["PMID:17615295","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase II complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:0120097","terms_by_termid":{"GO:0120097":null}}


id: GO:1905541
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_02605","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107061,89900,95447,88314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["PMID:14718525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010963","GO:1902826"],"synonyms":[{"name":"regulation of L-arginine import","type":"broad"},{"name":"regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905541","terms_by_termid":{"GO:1905589":null}}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: GO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of peptidyl-glycine cholest-5-en-3-beta-ol ester at the carboxy-terminus of autolytically cleaved proteins.","definition_xrefs":["RESID:AA0309"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine (obsolete GO:0019708)","synonyms":[{"name":"peptidyl-glycine cholesteryl ester anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0019708"}


id: _global:has_output_o_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the gene_product_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_product_of","secondary_identifiers":["GOREL:0001029"],"termid":"_global:has_output_o_product_of"}


id: PR:O74779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein mug164 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.07c","synonyms":[{"name":"Spom972h-mmb1","type":"exact"},{"name":"meiotically up-regulated gene 164 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74779"}


id: PBO:0079748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L3","termid":"PBO:0079748"}


id: FYPO:0004545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of proteasome-mediated, ubiquitin-dependent protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased proteasomal ubiquitin-dependent protein degradation","synonyms":[{"name":"decreased proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"decreased proteasomal ubiquitin-dependent protein degradation during mitotic cell cycle","type":"related"},{"name":"decreased proteasomal ubiquitin-dependent protein degradation during vegetative growth","type":"exact"},{"name":"decreased proteasome-mediated ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"reduced proteasomal ubiquitin-dependent protein degradation","type":"exact"}],"termid":"FYPO:0004545"}


id: PBO:0081361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 195","termid":"PBO:0081361"}


id: PBO:0075982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 6","termid":"PBO:0075982"}


id: GO:2000938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellotriose metabolic process","termid":"GO:2000935"},{"relation_name":"is_a","term_name":"regulation of cellotriose catabolic process","termid":"GO:2000936"},{"relation_name":"positively_regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellotriose catabolic process","synonyms":[{"name":"positive regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000938"}


id: GO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-aconitate = cis-aconitate.","definition_xrefs":["RHEA:17265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"aconitate delta-isomerase activity","secondary_identifiers":["KEGG_REACTION:R02244","EC:5.3.3.7","MetaCyc:ACONITATE-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"aconitate D-isomerase activity","type":"exact"},{"name":"aconitate delta2-delta3-isomerase activity","type":"related"},{"name":"aconitate isomerase activity","type":"broad"}],"termid":"GO:0047614"}


id: PBO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 5","termid":"PBO:0047504"}


id: PBO:0054145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1512","termid":"PBO:0054145"}


id: GO:0071465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to desiccation","termid":"GO:0009269"},{"relation_name":"is_a","term_name":"cellular response to water deprivation","termid":"GO:0042631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to desiccation","synonyms":[{"name":"desiccation tolerance","type":"related"}],"termid":"GO:0071465"}


id: PBO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis I","termid":"PBO:0007604"}


id: SO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a micro RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_primary_transcript","secondary_identifiers":["SO:0000648"],"synonyms":[{"name":"miRNA primary transcript","type":"exact"},{"name":"micro RNA primary transcript","type":"exact"},{"name":"small temporal RNA primary transcript","type":"exact"},{"name":"stRNA primary transcript","type":"exact"},{"name":"stRNA_primary_transcript","type":"exact"}],"termid":"SO:0000647"}


id: GO:2000838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of androstenedione secretion","termid":"GO:2000837"},{"relation_name":"negatively_regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of androstenedione secretion","synonyms":[{"name":"negative regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000838"}


id: GO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-glycerol + H2O = sn-glycerol 3-phosphate + CMP + 2 H+.","definition_xrefs":["EC:3.6.1.16","RHEA:21692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"CDP-glycerol diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R00855","MetaCyc:CDP-GLYCEROL-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"CDP-glycerol phosphoglycerohydrolase activity","type":"related"},{"name":"CDP-glycerol pyrophosphatase activity","type":"exact"},{"name":"CDPglycerol diphosphatase activity","type":"related"},{"name":"CDPglycerol phosphoglycerohydrolase activity","type":"related"},{"name":"CDPglycerol pyrophosphatase activity","type":"related"},{"name":"cytidine diphosphoglycerol pyrophosphatase activity","type":"related"}],"termid":"GO:0047734"}


id: GO:0014037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell differentiation","termid":"GO:0014037"}


id: PBO:0027422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027422"}


id: PBO:0050048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, K (pseudogene)","termid":"PBO:0050048"}


id: GO:0160172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=31 or pseudo T=31 symmetry.","definition_xrefs":["VZ:7036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=31/pseudo31 icosahedral capsid","termid":"GO:0160172"}


id: PBO:0013042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear exosome-associated RNA binding protein Mpp6","termid":"PBO:0013042"}


id: PATO:0000974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000974 relative porosity (obsolete PATO:0000974)","termid":"PATO:0000974"}


id: PATO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000754 startle response (obsolete PATO:0000754)","termid":"PATO:0000754"}


id: PBO:0059403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33","termid":"PBO:0059403"}


id: PBO:0071197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 38","termid":"PBO:0071197"}


id: PBO:0062551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 1","termid":"PBO:0062551"}


id: GO:1901447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to propan-1-ol","termid":"GO:1901445"},{"relation_name":"positively_regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to propan-1-ol","synonyms":[{"name":"activation of response to propan-1-ol","type":"narrow"},{"name":"up regulation of response to propan-1-ol","type":"exact"},{"name":"up-regulation of response to propan-1-ol","type":"exact"},{"name":"upregulation of response to propan-1-ol","type":"exact"}],"termid":"GO:1901447"}


id: PBO:0076871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 19","termid":"PBO:0076871"}


id: PBO:0046234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 28","termid":"PBO:0046234"}


id: PBO:0113505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; produces two isoforms based on alternative translational starts; localizes to the nucleus and mitochondrion, producing N2,N2-dimethylguanosine in tRNAs; involved in the methylation of guanosine and uridine ribonucleosides in mRNA; nuclear Trm1p is evenly distributed around the inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon the SPB","termid":"PBO:0113505"}


id: PATO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of solids.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a solid","termid":"PATO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solid configuration","synonyms":[{"name":"solid","type":"exact"}],"termid":"PATO:0001736"}


id: PBO:0043592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXII alpha 1 chain","termid":"PBO:0043592"}


id: PBO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH8 divergent transcript","termid":"PBO:0045152"}


id: GO:0015282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH oxidase-associated cytochrome b558 hydrogen channel activity (obsolete GO:0015282)","synonyms":[{"name":"NADPH oxidase-associated cytochrome b558 hydrogen channel activity","type":"exact"},{"name":"NADPH oxidase-associated cytochrome b558 proton channel","type":"exact"}],"termid":"GO:0015282"}


id: PBO:0079923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB1 ribosome biogenesis homolog","termid":"PBO:0079923"}


id: GO:1904123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A serotonin receptor signaling pathway that results in positive regulation of fatty acid beta-oxidation.","definition_xrefs":["PMID:24120942","GO_REF:0000063","GOC:kmv","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629","GO:0044281","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","synonyms":[{"name":"activation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"}],"termid":"GO:1904123"}


id: GO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a protein is incorporated into a mitochondrial membrane as the initial phase of the mitochondrial membrane permeabilization that takes place in the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","PMID:12952892"],"gene_count":0,"genotype_count":0,"name":"obsolete protein insertion into mitochondrial membrane involved in apoptotic signaling pathway (obsolete GO:0001844)","synonyms":[{"name":"insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"}],"termid":"GO:0001844"}


id: PBO:0066953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 255","termid":"PBO:0066953"}


id: PBO:0045016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 1A","termid":"PBO:0045016"}


id: GO:0051397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of basic amino acid residues at the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal basic amino acid aminopeptidase activity (obsolete GO:0051397)","synonyms":[{"name":"N-terminal basic amino acid aminopeptidase activity","type":"exact"}],"termid":"GO:0051397"}


id: PBO:0047854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q25.1)","termid":"PBO:0047854"}


id: GO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyroxine (T4) or triiodothyronine (T3), tyrosine-based hormones produced by the thyroid gland.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thyroid hormone binding","synonyms":[{"name":"thyroxine binding","type":"narrow"},{"name":"triiodothyronine binding","type":"narrow"}],"termid":"GO:0070324"}


id: GO:0000976
data:
  {"annotated_genes":["SJAG_05253","SJAG_02149","SJAG_01740","SJAG_05288","SJAG_04009","SJAG_04092","SJAG_01343","SJAG_03183","SJAG_02747","SJAG_01157","SJAG_04855","SJAG_01930","SJAG_03622","SJAG_00802","SJAG_02048","SJAG_04036","SJAG_00664","SJAG_00692","SJAG_04388","SJAG_03484","SJAG_00386","SJAG_02218","SJAG_02311","SJAG_03923","SJAG_02406","SJAG_02730","SJAG_02956","SJAG_00741","SJAG_04839","SJAG_02252","SJAG_02415","SJAG_02052","SJAG_01725","SJAG_00979","SJAG_04611","SJAG_01243","SJAG_00792","SJAG_00958","SJAG_00266","SJAG_02254","SJAG_00693","SJAG_06599","SJAG_03143","SJAG_00210","SJAG_03120","SJAG_03473","SJAG_04917","SJAG_02810","SJAG_01583","SJAG_03538","SJAG_00926","SJAG_01532","SJAG_03354","SJAG_05339","SJAG_00073","SJAG_00987","SJAG_00304","SJAG_03911","SJAG_03346","SJAG_04584","SJAG_01694","SJAG_04813","SJAG_02709","SJAG_01062","SJAG_04421","SJAG_03388","SJAG_02458","SJAG_04381","SJAG_05006","SJAG_00861","SJAG_00037","SJAG_03918","SJAG_00698","SJAG_00163","SJAG_03241","SJAG_05247","SJAG_01916","SJAG_02752","SJAG_00124","SJAG_02569","SJAG_01307","SJAG_04249","SJAG_00896","SJAG_02922","SJAG_03014","SJAG_02813","SJAG_04749","SJAG_06576","SJAG_01441","SJAG_00202","SJAG_05337","SJAG_03519","SJAG_04191","SJAG_02472","SJAG_02138","SJAG_00421","SJAG_00045","SJAG_02326","SJAG_04712","SJAG_03735","SJAG_05153","SJAG_03879","SJAG_02242","SJAG_02938","SJAG_00634","SJAG_05343"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71405,72261,75756,93374,99662,104991,110147],"is_not":false,"summary":null,"term":"GO:0000976"},{"annotations":[112584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000987"},{"annotations":[87253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001046"},{"annotations":[91706,94751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001018"},{"annotations":[112961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001165"},{"annotations":[105680,108460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001164"},{"annotations":[106267,99897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001163"},{"annotations":[107393,113993,77646,92612,88489,103261,91312,98782,105719,107426,85047,84554,100503,102782,91296,94101,86052,102371,107254,94104,107585,108410,100996,93872,85627,105578,114568,93502,99250,90640,92856,93632,98043,105336,84193,106221,94103,89872,113122,103533,102638,101315,104510,102900,92267,94996,111095,105718,110195,96371,89045,100991,110600,89331,112984,98834,105164,104752,79724,114854,104111,89814,108450,94102,107410,86685,93151,84624,96683,89871,96068,84991,94105,100103,103587,97053,90286,108449,98600,109919,94682,112587,111346,93949,105883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[103588,105337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[90721,92153,108411,85870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[104112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"},{"annotations":[98783,85463,114569,85381,112145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000977"},{"annotations":[84779,96144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[96146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[96147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[99616,92156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"},{"annotations":[104329,96452,98836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulatory region nucleic acid binding","termid":"GO:0001067"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":106,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00045":null,"SJAG_00073":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00202":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00634":null,"SJAG_00664":null,"SJAG_00692":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00741":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00896":null,"SJAG_00926":null,"SJAG_00958":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02242":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02458":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02747":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02813":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03014":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_03923":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04611":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04917":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05253":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"transcription cis-regulatory region binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000975","GO:0044212","GO:0001017","GO:0000984"],"synonyms":[{"name":"bacterial-type RNA polymerase regulatory region DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"eubacterial-type RNA polymerase regulatory region DNA binding","type":"narrow"},{"name":"eubacterial-type RNA polymerase regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"regulatory region DNA binding","type":"broad"},{"name":"transcription regulatory region DNA binding","type":"related"},{"name":"transcription regulatory region sequence-specific DNA binding","type":"exact"}],"termid":"GO:0000976","terms_by_termid":{"GO:0000976":null,"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0000987":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0001018":null,"GO:0001046":null,"GO:0001147":null,"GO:0001162":null,"GO:0001163":null,"GO:0001164":null,"GO:0001165":null,"GO:0044377":null}}


id: MOD:01953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron cluster to tetrakis-L-cysteinyl tetrairon octanitrosyl.","definition_xrefs":["PubMed:21182249","RESID:AA0599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon octanitrosyl","termid":"MOD:01953"}


id: GO:0120109
data:
  {"annotated_genes":["SJAG_01067","SJAG_03092","SJAG_01601","SJAG_01837","SJAG_01263","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113179],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[102481,86352,113379,101631,95697],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044820"}]},"cv_name":"biological_process","definition":"The process in which the telomeres are gathered together to a small number of foci per chromosome (usually one per chromosome or fewer), and moved to and tethered at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic telomere clustering and tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120109","terms_by_termid":{"GO:0044820":null,"GO:0120110":null}}


id: PBO:0005383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2-C, Ubc11","termid":"PBO:0005383"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: PBO:0085710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in splicing Group I aI5-beta intron from COX1 mRNA; mitochondrial matrix protein","termid":"PBO:0085710"}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: GO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host innate immune response","secondary_identifiers":["GO:0052309"],"synonyms":[{"name":"down regulation by symbiont of host innate immunity","type":"exact"},{"name":"down-regulation by symbiont of host innate immunity","type":"exact"},{"name":"downregulation by symbiont of host innate immunity","type":"exact"},{"name":"inhibition by symbiont of host innate immunity","type":"narrow"},{"name":"negative regulation by symbiont of host innate immune response","type":"exact"},{"name":"negative regulation by symbiont of host innate immunity","type":"exact"},{"name":"negative regulation of host innate immune response","type":"exact"},{"name":"negative regulation of innate immune response in other organism","type":"broad"},{"name":"suppression by symbiont of host innate immune response","type":"exact"},{"name":"suppression of host innate immune response","type":"exact"}],"termid":"GO:0052170"}


id: PBO:0081399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 239","termid":"PBO:0081399"}


id: PR:Q9P6K3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30C2.08 gene.","definition_xrefs":["UniProtKB:Q9P6K3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0662 protein C30C2.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30C2.08","synonyms":[{"name":"Spom972h-SPAC30C2.08","type":"exact"}],"termid":"PR:Q9P6K3"}


id: PBO:0004768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1 (predicted)","termid":"PBO:0004768"}


id: GO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"positively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of amino acid metabolic process","synonyms":[{"name":"activation of amino acid metabolic process","type":"narrow"},{"name":"positive regulation of amino acid metabolism","type":"exact"},{"name":"positive regulation of cellular amino acid metabolic process","type":"exact"},{"name":"stimulation of amino acid metabolic process","type":"narrow"},{"name":"up regulation of amino acid metabolic process","type":"exact"},{"name":"up-regulation of amino acid metabolic process","type":"exact"},{"name":"upregulation of amino acid metabolic process","type":"exact"}],"termid":"GO:0045764"}


id: PBO:0080337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 101 pseudogene","termid":"PBO:0080337"}


id: FYPO:0002436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of actin cables within a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"misoriented actin cables","synonyms":[{"name":"abnormal actin cable orientation","type":"exact"},{"name":"abnormal formin-nucleated actin cable orientation","type":"exact"},{"name":"misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"misoriented actin cables during vegetative growth","type":"exact"},{"name":"misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002436"}


id: PBO:0063281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 7","termid":"PBO:0063281"}


id: FYPO:0006151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of SUMO-specific protease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal SUMO-specific protease activity","termid":"FYPO:0006151"}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: PBO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt3","termid":"PBO:0001803"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: PBO:0076430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 6","termid":"PBO:0076430"}


id: FYPO:0004270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell septum edging catabolic process","termid":"FYPO:0004269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased cell septum edging catabolic process","synonyms":[{"name":"decreased cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"decreased cell septum edging hydrolysis","type":"exact"},{"name":"reduced cell septum edging catabolic process","type":"exact"}],"termid":"FYPO:0004270"}


id: PBO:0113251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; involved in clathrin-mediated endocytosis; activation by TEDS site phosphorylation increases actin gliding, motor activity and ligand-induced endocytosis; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0113251"}


id: PBO:0042738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN pseudogene 1","termid":"PBO:0042738"}


id: PBO:0075832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin","termid":"PBO:0075832"}


id: PR:O94246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13295:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.06c","secondary_identifiers":["UniProtKB:O94246"],"synonyms":[{"name":"GCS light chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLM","type":"exact"},{"name":"gamma-ECS regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate--cysteine ligase modifier subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94246"}


id: PBO:0079891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase homolog","termid":"PBO:0079891"}


id: GO:0033814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + propanoyl-CoA = 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestan-26-oyl-CoA + CoA.","definition_xrefs":["RHEA:16865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"propanoyl-CoA C-acyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.176-RXN"],"synonyms":[{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase activity","type":"related"},{"name":"PTE-2","type":"related"},{"name":"SCP-X","type":"related"},{"name":"SCPchi","type":"related"},{"name":"peroxisomal thiolase 2 activity","type":"narrow"},{"name":"sterol carrier protein-X","type":"related"},{"name":"sterol carrier protein-chi","type":"related"}],"termid":"GO:0033814"}


id: PBO:0027466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_thickness_at_new_end_during_vegetative_growth","termid":"PBO:0027466"}


id: PBO:0088031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via ubiquitin-26S proteasome system; essential for cellular stress response; encoded as polyubiquitin precursor comprised of 5 head-to-tail repeats; number of repeats is evolutionarily unstable within and between yeast species; protein abundance increases in response to DNA replication stress; implicated as modulator of replicative lifespan","termid":"PBO:0088031"}


id: PBO:0073551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 3","termid":"PBO:0073551"}


id: PBO:0043225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 4","termid":"PBO:0043225"}


id: PBO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 4","termid":"PBO:0045684"}


id: PBO:0084013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, heat shock, and stationary phase; activity regulated by cAMP-dependent, Snf1p and Pho85p kinases as well as by the Gac1p-Glc7p phosphatase; GSY2 has a paralog, GSY1, that arose from the whole genome duplication; relocalizes from cytoplasm to plasma membrane upon DNA replication stress","termid":"PBO:0084013"}


id: PBO:0063319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA clamp associated factor","termid":"PBO:0063319"}


id: PBO:0046643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 24","termid":"PBO:0046643"}


id: PATO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000538 alkali sensitivity value (obsolete PATO:0000538)","termid":"PATO:0000538"}


id: FYPO:0005622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains a normal (i.e. indistinguishable from wild type) amount of adducts formed between a topoisomerase and DNA.","definition_xrefs":["PomBase:mah","PMID:22730331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal topoisomerase-DNA adduct level","synonyms":[{"name":"normal Top1-DNA adduct level","type":"narrow"},{"name":"normal Top1cc level","type":"narrow"},{"name":"normal topoisomerase I-DNA adduct level","type":"narrow"},{"name":"normal topoisomerase-DNA adduct level during mitotic cell cycle","type":"related"},{"name":"normal topoisomerase-DNA adduct level during vegetative growth","type":"exact"}],"termid":"FYPO:0005622"}


id: GO:0098975
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma.","definition_xrefs":["GOC:dos","Wikipedia:Neuromuscular_junction&oldid=723623502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse","termid":"GO:0098794"},{"relation_name":"part_of","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse of neuromuscular junction","termid":"GO:0098975"}


id: GO:2000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cyclodextrin metabolic process","termid":"GO:2000955"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin catabolic process","termid":"GO:2000957"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclodextrin catabolic process","synonyms":[{"name":"negative regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000958"}


id: PR:Q9UTL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.15c","synonyms":[{"name":"COG complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog1","type":"exact"}],"termid":"PR:Q9UTL1"}


id: PBO:0026716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026716"}


id: GO:0051254
data:
  {"annotated_genes":["SJAG_04855","SJAG_03538","SJAG_04825","SJAG_04712","SJAG_02938","SJAG_01436","SJAG_05322","SJAG_01193","SJAG_04407","SJAG_01150","SJAG_05010","SJAG_00822","SJAG_03876","SJAG_05694","SJAG_00641","SJAG_01062","SJAG_04153","SJAG_01771","SJAG_04551","SJAG_04647","SJAG_00164","SJAG_01919","SJAG_16457","SJAG_03967","SJAG_02252","SJAG_03883","SJAG_01149","SJAG_05341","SJAG_02849","SJAG_02391","SJAG_01521","SJAG_02138","SJAG_04321","SJAG_02239","SJAG_00766","SJAG_05288","SJAG_05313","SJAG_02326","SJAG_04818","SJAG_03126","SJAG_03981","SJAG_02810","SJAG_04421","SJAG_01778","SJAG_01625","SJAG_01213","SJAG_04206","SJAG_04036","SJAG_04839","SJAG_05343","SJAG_04682","SJAG_04006","SJAG_02730","SJAG_06576","SJAG_01199","SJAG_06638","SJAG_05153","SJAG_03484","SJAG_04099","SJAG_02213","SJAG_04350","SJAG_05187","SJAG_00266","SJAG_00343","SJAG_02218","SJAG_03519","SJAG_01403","SJAG_01878","SJAG_01053","SJAG_03143","SJAG_02255","SJAG_00802","SJAG_01441","SJAG_04820","SJAG_03745","SJAG_00996","SJAG_02551","SJAG_02474","SJAG_04191","SJAG_01740","SJAG_04388","SJAG_00693","SJAG_03157","SJAG_02383","SJAG_03113","SJAG_01910","SJAG_00904","SJAG_02608","SJAG_00792","SJAG_02406","SJAG_03622","SJAG_03421","SJAG_02018","SJAG_02057","SJAG_00210","SJAG_03179","SJAG_01944","SJAG_02415","SJAG_01113","SJAG_04880","SJAG_03897","SJAG_04890","SJAG_00285","SJAG_00391","SJAG_05247","SJAG_02311","SJAG_04427","SJAG_01805","SJAG_03061","SJAG_04749","SJAG_02773","SJAG_03118","SJAG_00698","SJAG_04092","SJAG_00297","SJAG_03501","SJAG_01938","SJAG_02494","SJAG_04084","SJAG_02956","SJAG_02622","SJAG_02058","SJAG_01916","SJAG_00269","SJAG_01040","SJAG_00156","SJAG_00973","SJAG_04373","SJAG_01583","SJAG_00150","SJAG_02592","SJAG_02048","SJAG_03590","SJAG_03241","SJAG_00987","SJAG_04249","SJAG_04813","SJAG_00909","SJAG_03067","SJAG_05203","SJAG_03346","SJAG_00342","SJAG_04009","SJAG_03573","SJAG_02036","SJAG_01952","SJAG_06599","SJAG_03183","SJAG_01694","SJAG_02370","SJAG_00686","SJAG_03597","SJAG_03289","SJAG_01818","SJAG_00759","SJAG_02709","SJAG_04611","SJAG_00854","SJAG_01764","SJAG_01307","SJAG_04824","SJAG_02808","SJAG_04755","SJAG_00613","SJAG_02723","SJAG_01191","SJAG_02540","SJAG_03735","SJAG_02196","SJAG_04705","SJAG_03879","SJAG_00163","SJAG_01151","SJAG_00966","SJAG_02671","SJAG_02472","SJAG_02698","SJAG_01243"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[106461,106412,88129,108525,109987,102661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[100944,112395,93818,98632,101788,89647,102994,103987,88822,111955,114801,92484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[109836,111657,94623,94709,86284,96487,107594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[87367,90908,112167,113674,105731,99574,95084,89978,113116,86374,92080,88567,88507,89076,89171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[88243],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[92197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[108444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045893"},{"annotations":[105399,107439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[114912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74699,107449,73308,88736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[103184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[86285,97560,101441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[84552,103186,90064,86049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111698,86296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[92787,88620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000234"},{"annotations":[108486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[113503,107091,88621,103498,92565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[97039,85624,84620,92101,93870,102635,107440,111344,94095,87988,98826,112788,94093,110193,84748,84014,90284,90633,90911,95151,89323,91310,94994,89180,101313,104502,100994,105101,107250,107391,104985,108276,108445,100986,61742,64837,112981,105400,90947,106218,111518,113496,89866,113504,114564,92264,115591,68151,115592,112583,113989,110632,98780,99710,113878,65716,108812,105713,96066,105332,107408,84190,68187,90378,110145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process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"positively_regulates","term_name":"RNA metabolic 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regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of RNA metabolic process","type":"narrow"},{"name":"positive regulation of RNA metabolism","type":"exact"},{"name":"stimulation of RNA metabolic process","type":"narrow"},{"name":"up regulation of RNA metabolic process","type":"exact"},{"name":"up-regulation of RNA metabolic process","type":"exact"},{"name":"upregulation of RNA metabolic process","type":"exact"}],"termid":"GO:0051254","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0032786":null,"GO:0032968":null,"GO:0036450":null,"GO:0045893":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0048026":null,"GO:0060213":null,"GO:0060261":null,"GO:0060963":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1904595":null,"GO:1905746":null,"GO:1990074":null,"GO:2000234":null}}


id: PR:P36584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl302 gene.","definition_xrefs":["UniProtKB:P36584","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.06c","synonyms":[{"name":"Spom972h-rpl302","type":"exact"}],"termid":"PR:P36584"}


id: GO:0032642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine production","secondary_identifiers":["GO:0090196","GO:0045073"],"synonyms":[{"name":"regulation of chemokine biosynthetic process","type":"narrow"},{"name":"regulation of chemokine secretion","type":"narrow"}],"termid":"GO:0032642"}


id: PBO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 1","termid":"PBO:0060779"}


id: PBO:0062862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase, ubiquitin aldehyde binding 1","termid":"PBO:0062862"}


id: PATO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000483 tactile hyperresponsive (obsolete PATO:0000483)","termid":"PATO:0000483"}


id: PBO:0062779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 1","termid":"PBO:0062779"}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:17179073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_03606","SJAG_00057","SJAG_04068","SJAG_02958","SJAG_03608","SJAG_03960","SJAG_04905","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60548,64403,110681,113713,89064,62336,57745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[110686,107171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[110687,113718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[107172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[99527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[92340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[92341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006861","GO:0008644"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: PBO:0054760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2172","termid":"PBO:0054760"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: PBO:0054050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1392","termid":"PBO:0054050"}


id: GO:0055083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monovalent inorganic anion homeostasis (obsolete GO:0055083)","termid":"GO:0055083"}


id: PBO:0041361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein beta","termid":"PBO:0041361"}


id: GO:0097220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains a single specialized sieve area.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"simple sieve plate","termid":"GO:0097220"}


id: PBO:0074050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A30 antisense RNA 1","termid":"PBO:0074050"}


id: GO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"negatively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axonogenesis","synonyms":[{"name":"down regulation of axonogenesis","type":"exact"},{"name":"down-regulation of axonogenesis","type":"exact"},{"name":"downregulation of axonogenesis","type":"exact"},{"name":"inhibition of axonogenesis","type":"narrow"}],"termid":"GO:0050771"}


id: PBO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease III","termid":"PBO:0000777"}


id: GO:0100035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates transmembrane transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane transport by transcription from RNA polymerase II promoter (obsolete GO:0100035)","termid":"GO:0100035"}


id: PBO:0031618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposition","termid":"PBO:0031618"}


id: MOD:01382
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N,N,N-trimethyl-L-methionine.","definition_xrefs":["PubMed:18611379","RESID:AA0456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated methionine","termid":"MOD:01463"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-methionine","synonyms":[{"name":"(1S)-1-carboxy-N,N,N-trimethyl-3-(methylsulfanyl)propanaminium","type":"exact"},{"name":"(1S)-1-carboxy-N,N,N-trimethyl-3-(methylsulfanyl)propanazanium","type":"exact"},{"name":"2-trimethylammonio-4-(methylthio)butanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylmethionine","type":"exact"},{"name":"N,N,N-trimethyl-L-methionine","type":"exact"},{"name":"N,N,N-trimethylmethionine cation","type":"exact"},{"name":"N,N,N-trimethylmethioninium","type":"exact"},{"name":"N2Me3+Met","type":"exact"}],"termid":"MOD:01382"}


id: GO:0006449
data:
  {"annotated_genes":["SJAG_00642","SJAG_02812","SJAG_02189","SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108239],"is_not":false,"summary":null,"term":"GO:0006449"},{"annotations":[105693,105692,91374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00642":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006449","terms_by_termid":{"GO:0006449":null,"GO:0045905":null}}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: PBO:0084816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site","termid":"PBO:0084816"}


id: PBO:0078175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-6","termid":"PBO:0078175"}


id: PBO:0017861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght4","termid":"PBO:0017861"}


id: PBO:0056347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 5","termid":"PBO:0056347"}


id: GO:1900815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monodictyphenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"monodictyphenone metabolic process","termid":"GO:1900813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"monodictyphenone biosynthetic process","synonyms":[{"name":"monodictyphenone anabolism","type":"exact"},{"name":"monodictyphenone biosynthesis","type":"exact"},{"name":"monodictyphenone formation","type":"exact"},{"name":"monodictyphenone synthesis","type":"exact"}],"termid":"GO:1900815"}


id: GO:0070921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of siRNA processing","secondary_identifiers":["GO:0090065"],"synonyms":[{"name":"regulation of RNA interference, production of siRNA","type":"exact"},{"name":"regulation of chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"regulation of production of siRNA involved in PTGS","type":"related"},{"name":"regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"regulation of production of siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"regulation of production of siRNA involved in gene silencing by small RNA","type":"related"},{"name":"regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"regulation of siRNA production","type":"related"}],"termid":"GO:0070921"}


id: GO:2000637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of gene silencing by a microRNA (miRNA).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA-mediated gene silencing","termid":"GO:0060964"},{"relation_name":"is_a","term_name":"positive regulation of post-transcriptional gene silencing by RNA","termid":"GO:1900370"},{"relation_name":"positively_regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA-mediated gene silencing","synonyms":[{"name":"positive regulation of gene silencing by miRNA","type":"exact"},{"name":"positive regulation of gene silencing by microRNA","type":"related"},{"name":"positive regulation of microRNA-mediated gene silencing","type":"exact"}],"termid":"GO:2000637"}


id: PBO:0057358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ab","termid":"PBO:0057358"}


id: GO:0031733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR8 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR8 chemokine receptor binding","synonyms":[{"name":"CCR8 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031733"}


id: GO:0097569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Region of the ventral side of the cell body found in Giardia species (trophozoite stage). It is located posterior on either side of the ventral groove; the upper boundary is the ventral disc, and the lower boundary is marked by the posteriolateral flagella.","definition_xrefs":["ISBN:9780124260207","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral shield","termid":"GO:0097569"}


id: PBO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F4, pseudogene","termid":"PBO:0051786"}


id: MOD:01644
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine removal","termid":"MOD:01644"}


id: GO:0051643
data:
  {"annotated_genes":["SJAG_00053","SJAG_04221","SJAG_03247","SJAG_01168","SJAG_02626","SJAG_01564","SJAG_03170","SJAG_01116","SJAG_04413","SJAG_04417","SJAG_01437"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88062,100917,114658,98340,108188,115449,94025,86995,115179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[86996,100919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[103557,111715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04221":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER localization","type":"exact"},{"name":"endoplasmic reticulum localisation","type":"exact"},{"name":"establishment and maintenance of ER localization","type":"exact"}],"termid":"GO:0051643","terms_by_termid":{"GO:0051685":null,"GO:0061817":null,"GO:1990854":null}}


id: PR:Q9P7N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03727","PRO:DNx","PANTHER:PTHR20902:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.05","secondary_identifiers":["UniProtKB:Q9P7N9"],"synonyms":[{"name":"Spom972h-TRAPPC5","type":"exact"},{"name":"TRAPP subunit trs31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N9"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: MOD:01567
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01567"}


id: PBO:0027054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_microtubules","termid":"PBO:0027054"}


id: GO:0046373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-arabinose metabolic process","synonyms":[{"name":"L-arabinose metabolism","type":"exact"}],"termid":"GO:0046373"}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["GOC:mah","PMID:11452597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene breakdown","type":"exact"},{"name":"pinene catabolism","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: PBO:0045283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 34","termid":"PBO:0045283"}


id: GO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-33 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-33 receptor activity","synonyms":[{"name":"IL-33 receptor activity","type":"exact"},{"name":"IL-33R","type":"exact"}],"termid":"GO:0002114"}


id: GO:2000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial microparticle formation","synonyms":[{"name":"regulation of endothelial microparticle generation","type":"exact"},{"name":"regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000335"}


id: PBO:0088314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain protein Bdc1","termid":"PBO:0088314"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: PBO:0029019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029019"}


id: GO:0004396
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91105],"is_not":false,"summary":null,"term":"GO:0004396"},{"annotations":[91103,94567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008865"},{"annotations":[94568,91104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004340"},{"annotations":[94569,91106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate.","definition_xrefs":["EC:2.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hexokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22740","MetaCyc:HEXOKINASE-RXN"],"synonyms":[{"name":"ATP-dependent hexokinase activity","type":"related"},{"name":"ATP:D-hexose 6-phosphotransferase activity","type":"related"},{"name":"glucose ATP phosphotransferase activity","type":"related"},{"name":"hexokinase (phosphorylating)","type":"related"},{"name":"hexokinase D","type":"related"},{"name":"hexokinase type I activity","type":"narrow"},{"name":"hexokinase type II activity","type":"narrow"},{"name":"hexokinase type III activity","type":"narrow"},{"name":"hexokinase type IV","type":"related"},{"name":"hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"hexokinase type IV glucokinase activity","type":"related"}],"termid":"GO:0004396","terms_by_termid":{"GO:0004340":null,"GO:0004396":null,"GO:0008865":null,"GO:0019158":null}}


id: PBO:0031129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genome_stability_defects_(obsolete_FYPO:0000241)","termid":"PBO:0031129"}


id: GO:0075014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont on or near host rhizosphere (obsolete GO:0075014)","synonyms":[{"name":"growth or development of symbiont on or near host rhizosphere","type":"exact"}],"termid":"GO:0075014"}


id: GO:0048185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to activin, a dimer of inhibin-beta subunits.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"activin binding","termid":"GO:0048185"}


id: PBO:0042547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 11B","termid":"PBO:0042547"}


id: GO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:mah","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-substrate adhesion","termid":"GO:0031589"}


id: SO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An instance of a self-interacting DNA region flanked by left and right TAD boundaries.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain","synonyms":[{"name":"TAD","type":"exact"},{"name":"topologically associated domain","type":"exact"}],"termid":"SO:0002304"}


id: PBO:0054379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1775","termid":"PBO:0054379"}


id: GO:0046467
data:
  {"annotated_genes":["SJAG_03066","SJAG_01219","SJAG_02776","SJAG_04975","SJAG_02903","SJAG_01416","SJAG_04924","SJAG_05219","SJAG_00176","SJAG_01300","SJAG_02885","SJAG_05327","SJAG_02085","SJAG_03292","SJAG_04913","SJAG_04881","SJAG_02523","SJAG_02804","SJAG_04986","SJAG_02706","SJAG_03015","SJAG_02429","SJAG_03690","SJAG_00506","SJAG_06425","SJAG_04550","SJAG_00880","SJAG_03506","SJAG_02488","SJAG_01860","SJAG_03672","SJAG_00068","SJAG_02842","SJAG_01227","SJAG_00846","SJAG_02168","SJAG_06383","SJAG_04337","SJAG_04178","SJAG_04119","SJAG_02056","SJAG_02305","SJAG_00630","SJAG_03878","SJAG_00831","SJAG_01857","SJAG_03801","SJAG_01570","SJAG_02590","SJAG_05311","SJAG_02913","SJAG_04878","SJAG_03076","SJAG_04165","SJAG_01356","SJAG_00295","SJAG_03115","SJAG_04107","SJAG_01057","SJAG_05278","SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97295,107430],"is_not":false,"summary":null,"term":"GO:0046467"},{"annotations":[88477,106240,102066,105343,106603,89354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[100256,108124,94671,98158,88802,103250,87802,89657,91083,99585,108875,113743,110451,95438,84035,100318,90102,86137,106454,85512,105109,87975,111298,95231,112645,96847,111723,104078,92993,89568,96782,85241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[92303,87324,88378,91822,109052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[98709,94073,109054,88518,106150,111299,86092,97966,106241,90124,94773,96799,87185,114018,102412,91712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030148"},{"annotations":[102513,94229,102067,89355,106242,93475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00176":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00630":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01227":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01857":null,"SJAG_01860":null,"SJAG_02056":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03076":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03690":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04107":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04178":null,"SJAG_04337":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_04986":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"membrane lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid anabolism","type":"exact"},{"name":"membrane lipid biosynthesis","type":"exact"},{"name":"membrane lipid formation","type":"exact"},{"name":"membrane lipid synthesis","type":"exact"}],"termid":"GO:0046467","terms_by_termid":{"GO:0006506":null,"GO:0030148":null,"GO:0046467":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: PBO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21","termid":"PBO:0061649"}


id: PBO:0077463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C pseudogene 1","termid":"PBO:0077463"}


id: PBO:0075450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 3","termid":"PBO:0075450"}


id: GO:1905589
data:
  {"annotated_genes":["SJAG_03591","SJAG_05346","SJAG_00991","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88314,89900,95447,107061],"is_not":false,"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","PMID:14718525","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"positively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902828","GO:1901042"],"synonyms":[{"name":"activation of L-arginine import","type":"narrow"},{"name":"activation of L-arginine import across plasma membrane","type":"narrow"},{"name":"activation of L-arginine import into cell","type":"narrow"},{"name":"activation of L-arginine uptake","type":"exact"},{"name":"positive regulation of L-arginine import","type":"broad"},{"name":"positive regulation of L-arginine import into cell","type":"exact"},{"name":"positive regulation of L-arginine uptake","type":"exact"},{"name":"up regulation of L-arginine import","type":"exact"},{"name":"up regulation of L-arginine uptake","type":"exact"},{"name":"up-regulation of L-arginine import","type":"exact"},{"name":"up-regulation of L-arginine import into cell","type":"exact"},{"name":"up-regulation of L-arginine uptake","type":"exact"},{"name":"upregulation of L-arginine import","type":"exact"},{"name":"upregulation of L-arginine import into cell","type":"exact"},{"name":"upregulation of L-arginine uptake","type":"exact"}],"termid":"GO:1905589","terms_by_termid":{"GO:1905589":null}}


id: PBO:0114434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine sensor upstream of mTORC1","termid":"PBO:0114434"}


id: PBO:0055604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3042","termid":"PBO:0055604"}


id: PBO:0040727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 2","termid":"PBO:0040727"}


id: PBO:0088672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein","termid":"PBO:0088672"}


id: GO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces the formation of the salivary gland field by means of the secretion of a signal by a mesenchymal cell and its reception and interpretation by an epithelial cell resulting in it adopting the identity of a salivary gland bud cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"positively_regulates","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060639"}


id: PBO:0048992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC3 antisense RNA 1","termid":"PBO:0048992"}


id: PBO:0024837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf4 (predicted)","termid":"PBO:0024837"}


id: PR:P10651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P10651","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.3 (Schizosaccharomyces pombe)","termid":"PR:000027596"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom972h-hht3","type":"exact"}],"termid":"PR:P10651"}


id: GO:0102514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102514)","termid":"GO:0102514"}


id: PBO:0049185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 2","termid":"PBO:0049185"}


id: PR:P42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P42657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.13c","synonyms":[{"name":"Spom972h-rad25","type":"exact"}],"termid":"PR:P42657"}


id: PBO:0053621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 663","termid":"PBO:0053621"}


id: PBO:0067720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 18","termid":"PBO:0067720"}


id: GO:1904645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23555824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amyloid-beta","synonyms":[{"name":"response to beta-amyloid","type":"exact"},{"name":"response to beta-amyloids","type":"related"}],"termid":"GO:1904645"}


id: GO:1990005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle of varying size, but usually larger than 45 nm, with an electron dense granular core, found in noradrenergic and peptidergic cells.","definition_xrefs":["NIF_Subcellular:sao478230652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"granular vesicle","termid":"GO:1990005"}


id: GO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract development","synonyms":[{"name":"post-embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048612"}


id: GO:1904802
data:
  {"annotated_genes":["SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110816],"is_not":false,"summary":null,"term":"GO:1904802"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a RITS complex.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:26443059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"RITS complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RITS complex formation","type":"exact"}],"termid":"GO:1904802","terms_by_termid":{"GO:1904802":null}}


id: PBO:0039904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac/Cdc42 guanine nucleotide exchange factor 6","termid":"PBO:0039904"}


id: SO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's five prime region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_five_prime_overlap","synonyms":[{"name":"five prime-five prime overlap","type":"exact"}],"termid":"SO:0000074"}


id: PR:Q10092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3104 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3104 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.13","synonyms":[{"name":"Spom972h-hsp3104","type":"exact"},{"name":"glyoxalase 3 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10092"}


id: PBO:0059142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 9","termid":"PBO:0059142"}


id: PBO:0068226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 533","termid":"PBO:0068226"}


id: PR:O94598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.10c","synonyms":[{"name":"Spom972h-sec5","type":"exact"}],"termid":"PR:O94598"}


id: GO:0008314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to a ligand Gurken.","definition_xrefs":["GOC:bf","PMID:23972992"],"gene_count":0,"genotype_count":0,"name":"obsolete gurken signaling pathway (obsolete GO:0008314)","synonyms":[{"name":"gurken receptor signaling pathway","type":"exact"},{"name":"gurken receptor signalling pathway","type":"exact"},{"name":"gurken-activated signaling pathway","type":"related"},{"name":"signaling by Gurken","type":"exact"}],"termid":"GO:0008314"}


id: SO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A secondary structure variant that compensate for the change made by a previous variant.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_secondary_structure_variant","termid":"SO:0001596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory_transcript_secondary_structure_variant","synonyms":[{"name":"compensatory transcript secondary structure variant","type":"exact"}],"termid":"SO:0001597"}


id: PBO:0066985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 288","termid":"PBO:0066985"}


id: GO:0046895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal isoleucine of proteins to form the derivative N-methyl-L-isoleucine.","definition_xrefs":["RESID:AA0336"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-isoleucine methylation (obsolete GO:0046895)","termid":"GO:0046895"}


id: MOD:00964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine epsilon amino to imine + 12 amu","synonyms":[{"name":"N6-(methylidene)-lysine","type":"exact"}],"termid":"MOD:00964"}


id: PBO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype","termid":"PBO:0031294"}


id: PBO:0080799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 5","termid":"PBO:0080799"}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: PR:Q9USK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBP3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.17","synonyms":[{"name":"Spom972h-cbp3","type":"exact"}],"termid":"PR:Q9USK6"}


id: PBO:0068331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 38","termid":"PBO:0068331"}


id: PBO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jun proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052038"}


id: PBO:0046838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 11","termid":"PBO:0046838"}


id: GO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which infecting bacteria are clumped together by a host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial humoral response","termid":"GO:0019731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of bacterial agglutination","termid":"GO:0043152"}


id: GO:0070583
data:
  {"annotated_genes":["SJAG_04010","SJAG_01769","SJAG_00663","SJAG_04470","SJAG_03688","SJAG_02248"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91075,96397,96398,96674,102536,112481],"is_not":false,"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which a bending force is generated in the prospore membrane to form the characteristic curved shape of the prospore.","definition_xrefs":["GOC:dgf","PMID:18756268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_02248":null,"SJAG_03688":null,"SJAG_04010":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0030437","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"spore membrane bending pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM bending","type":"exact"},{"name":"ascospore-type prospore membrane bending","type":"exact"},{"name":"forespore membrane bending","type":"exact"}],"termid":"GO:0070583","terms_by_termid":{"GO:0070583":null}}


id: PATO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000528 drug insensitive (obsolete PATO:0000528)","termid":"PATO:0000528"}


id: GO:1990249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of identifying lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests that the repair complex recognizes distortions in the DNA helix. It subsequently recruits a nucleotide-excision repair, preincision complex.","definition_xrefs":["PMID:22331906","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990249"}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: FYPO:0005337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9K14 acetylation during vegetative growth (obsolete FYPO:0005337)","synonyms":[{"name":"increased histone H3 K9K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9K14 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone lysine H3 K9K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005337"}


id: PBO:0091950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase jmj4","termid":"PBO:0091950"}


id: PBO:0088188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger protein involved in control of meiosis; prevents meiosis by repressing IME1 expression and promotes mitosis by activating CLN2 expression; directly repressed by a1-alpha2 regulator; mediates cell type control of sporulation; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0088188"}


id: MOD:01173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["RESID:AA0425","PubMed:12626404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAsn","type":"exact"},{"name":"LIPID GPI-like-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01173"}


id: PATO:0000547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's exhibiting photosensitivity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitive","termid":"PATO:0000547"}


id: GO:0045574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"sterigmatocystin metabolic process","termid":"GO:0045460"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound catabolic process","termid":"GO:1901377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0019748","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"sterigmatocystin catabolic process","synonyms":[{"name":"sterigmatocystin breakdown","type":"exact"},{"name":"sterigmatocystin catabolism","type":"exact"},{"name":"sterigmatocystin degradation","type":"exact"}],"termid":"GO:0045574"}


id: GO:0071220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipoprotein","termid":"GO:0032493"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacterial lipoprotein","termid":"GO:0071220"}


id: PBO:0050812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0050812"}


id: PBO:0049413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCY2C antisense RNA 1","termid":"PBO:0049413"}


id: GO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine metabolic process","synonyms":[{"name":"dopamine metabolism","type":"exact"}],"termid":"GO:0042417"}


id: PBO:0005839
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.99.8","termid":"PBO:0005839"}


id: _global:interacts_with_via_parasite-host_interaction
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"_global:symbiotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","secondary_identifiers":["RO:0002443"],"termid":"_global:interacts_with_via_parasite-host_interaction"}


id: PBO:0027883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation","termid":"PBO:0027883"}


id: PBO:0004147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mitofilin ortholog (predicted)","termid":"PBO:0004147"}


id: PBO:0069449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 714, pseudogene","termid":"PBO:0069449"}


id: PBO:0034043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-allelopath_of","termid":"PBO:0034043"}


id: GO:0097503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of sialic acid to a substrate molecule.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sialylation","termid":"GO:0097503"}


id: FYPO:0006906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G2 to M phase until the cell reaches a certain size.","definition_xrefs":["GO:0031569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0001320","FYPO:0000631","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G2 cell size control checkpoint","synonyms":[{"name":"normal G2 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G2 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006906"}


id: PBO:0083326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORFs PTC2/YER089C and YER088W-B","termid":"PBO:0083326"}


id: PBO:0070851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 4","termid":"PBO:0070851"}


id: GO:0034836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-2-mercaptobenzothiazole + 1/2 O2 = 6,7-dihydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1181"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034836)","termid":"GO:0034836"}


id: PBO:0086857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein of unknown function; localizes to stress granules induced by glucose deprivation; predicted to be involved in ribosome biogenesis","termid":"PBO:0086857"}


id: GO:1902482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a regulatory T cell.","definition_xrefs":["GOC:nhn","PMID:20471291","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulatory T cell apoptotic process","synonyms":[{"name":"regulatory T cell apoptosis","type":"narrow"},{"name":"regulatory T lymphocyte apoptosis","type":"narrow"},{"name":"regulatory T lymphocyte apoptotic process","type":"exact"},{"name":"regulatory T-cell apoptosis","type":"narrow"},{"name":"regulatory T-cell apoptotic process","type":"exact"},{"name":"regulatory T-lymphocyte apoptosis","type":"narrow"},{"name":"regulatory T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1902482"}


id: PR:Q9P7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activation protein git1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.20c","synonyms":[{"name":"Spom972h-git1","type":"exact"},{"name":"glucose-insensitive transcription protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K5"}


id: GO:0003909
data:
  {"annotated_genes":["SJAG_00198","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89140],"is_not":false,"summary":null,"term":"GO:0003909"},{"annotations":[89139,110406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-175258","Reactome:R-HSA-174456","Reactome:R-HSA-5651789","Reactome:R-HSA-69173","Reactome:R-HSA-5651805","Reactome:R-HSA-73931","Reactome:R-HSA-6782227","Reactome:R-HSA-5358592","Reactome:R-HSA-5687675","Reactome:R-HSA-5693604","Reactome:R-HSA-5649734","Reactome:R-HSA-5690997"],"termid":"GO:0003909","terms_by_termid":{"GO:0003909":null,"GO:0003910":null}}


id: PBO:0091433
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat for base excision activity of N7-methylguanine = 2.6 x 10^-3 s-1","termid":"PBO:0091433"}


id: GO:1902487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-growing cell tip.","definition_xrefs":["PMID:23041194","GOC:TermGenie","PMID:21652630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to non-growing cell tip","synonyms":[{"name":"protein localisation in non-growing cell tip","type":"exact"},{"name":"protein localisation to non-growing cell tip","type":"exact"},{"name":"protein localization in non-growing cell tip","type":"exact"}],"termid":"GO:1902487"}


id: PBO:0085883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in energy metabolism under respiratory conditions; expression induced under carbon limitation and repressed under high glucose; RGI2 has a paralog, RGI1, that arose from the whole genome duplication","termid":"PBO:0085883"}


id: PR:P0CT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.13","synonyms":[{"name":"Spom972h-rps1402","type":"exact"}],"termid":"PR:P0CT57"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PBO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U","termid":"PBO:0061190"}


id: GO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neurectodermal cells to cells of the eye field and their capacity to differentiate into eye field cells. Eye field cells are neurectodermal cells that will form the optic placode.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"part_of","term_name":"lens placode formation involved in camera-type eye formation","termid":"GO:0046619"},{"relation_name":"part_of","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye field cell fate commitment involved in camera-type eye formation","termid":"GO:0060898"}


id: PBO:0039266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 18 family member A1","termid":"PBO:0039266"}


id: GO:1901584
data:
  {"annotated_genes":["SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104514],"is_not":false,"summary":null,"term":"GO:1901584"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tetrapeptide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"tetrapeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901584","terms_by_termid":{"GO:1901584":null}}


id: PR:Q9UUD8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18A7.01 gene.","definition_xrefs":["UniProtKB:Q9UUD8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized peptidase C18A7.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18A7.01","synonyms":[{"name":"Spom972h-SPBC18A7.01","type":"exact"}],"termid":"PR:Q9UUD8"}


id: GO:0140780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism effects a change in an anatomical system process of its host organism.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host system process (obsolete GO:0140780)","termid":"GO:0140780"}


id: GO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to peptidyl-L-3',4'-dihydroxyphenylalanine (DOPA).","definition_xrefs":["RESID:AA0146"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-3',4'-dihydroxyphenylalanine biosynthetic process from peptidyl-tyrosine (obsolete GO:0018067)","synonyms":[{"name":"peptidyl-L-3',4'-dihydroxyphenylalanine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4'-dihydroxyphenylalanine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4'-dihydroxyphenylalanine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018067"}


id: GO:1904956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","PMID:21347250","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"},{"relation_name":"regulates","term_name":"midbrain dopaminergic neuron differentiation","termid":"GO:1904948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of midbrain dopaminergic neuron differentiation","synonyms":[{"name":"regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of mDA neuron differentiation","type":"exact"},{"name":"regulation of midbrain DA neurogenesis","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904956"}


id: PBO:0062202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily X member 2","termid":"PBO:0062202"}


id: PBO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 divergent transcript","termid":"PBO:0080005"}


id: FYPO:0004628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication","synonyms":[{"name":"delayed premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004628"}


id: PBO:0041336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 18","termid":"PBO:0041336"}


id: GO:1990360
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of phosphorylating a large number of protein targets. Contributes to cell proliferation under glycose starvation conditions. In human, the complex is present as a dimer.","definition_xrefs":["PMID:24606918","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PKM2 protein kinase complex","synonyms":[{"name":"PKM2-SAICAR complex","type":"related"},{"name":"PKM2-SAICAR protein kinase complex","type":"related"}],"termid":"GO:1990360"}


id: PBO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof9","termid":"PBO:0003804"}


id: PBO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 5","termid":"PBO:0050743"}


id: PBO:0045749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBP like","termid":"PBO:0045749"}


id: PBO:0049872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HemK methyltransferase family member 1","termid":"PBO:0049872"}


id: PBO:0004047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20 small nucleolar RNA","termid":"PBO:0004047"}


id: PBO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2 (predicted)","termid":"PBO:0002493"}


id: GO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the mammary placode forms. The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper.","definition_xrefs":["GOC:dph","PMID:16168142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary placode formation","termid":"GO:0060596"}


id: PATO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given volume.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Mass_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"volumetric density","termid":"PATO:0001353"}


id: PBO:0111338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATP-dependent RNA helicase Has1","termid":"PBO:0111338"}


id: PBO:0080818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray radiation resistance associated 1","termid":"PBO:0080818"}


id: FYPO:0006560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G1 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006560"}


id: PBO:0074460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4B, pseudogene","termid":"PBO:0074460"}


id: GO:0033374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to secretory granule","termid":"GO:0033366"},{"relation_name":"part_of","term_name":"T cell secretory granule organization","termid":"GO:0033371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to T cell secretory granule","synonyms":[{"name":"protein localisation in T cell secretory granule","type":"exact"},{"name":"protein localization in T cell secretory granule","type":"exact"},{"name":"protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"protein localization in T-cell secretory granule","type":"exact"},{"name":"protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033374"}


id: GO:0060348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone development","termid":"GO:0060348"}


id: PBO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 3","termid":"PBO:0042590"}


id: GO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to leptomycin B","termid":"GO:1901344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptomycin B","termid":"GO:0072750"}


id: PBO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 1","termid":"PBO:0047732"}


id: PBO:0047120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member C","termid":"PBO:0047120"}


id: GO:0006480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal amino acid of a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid methylation","termid":"GO:0006480"}


id: GO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0035","RESID:AA0036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine phosphorylation","termid":"GO:0018106"}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: GO:0060939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epicardial-derived cardiac fibroblast over time, from its formation to the mature state. A epicardial-derived cardiac fibroblast is a connective tissue cell of the heart that arises from the epicardium and secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}


id: PBO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 3","termid":"PBO:0048752"}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["UniProtKB:O94303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: GO:0140892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction chloride(in) + 2 hydrogencarbonate(out) + Na+(out) = chloride(out) + 2 hydrogencarbonate(in) + Na+(in).","definition_xrefs":["PMID:18577713","PMID:8189393","PMID:20389022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"},{"relation_name":"is_a","term_name":"chloride:bicarbonate antiporter activity","termid":"GO:0140900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium,bicarbonate:chloride antiporter activity","secondary_identifiers":["TC:2.A.31.2.4"],"synonyms":[{"name":"sodium,hydrogencarbonate:chloride antiporter activity","type":"exact"},{"name":"sodium-dependent chloride/bicarbonate exchanger activity","type":"exact"}],"termid":"GO:0140892"}


id: PBO:0054013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1343","termid":"PBO:0054013"}


id: PBO:0028189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell,_normal_cell_length","termid":"PBO:0028189"}


id: GO:0140417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion from intracellular stores by a channel that opens when a ATP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22736763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly ATP-gated calcium channel activity","synonyms":[{"name":"ATP-sensitive calcium-release channel activity","type":"related"}],"termid":"GO:0140417"}


id: PBO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 18 member 1","termid":"PBO:0046537"}


id: MOD:01850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["RESID:AA0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01850"}


id: PBO:0056355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 9","termid":"PBO:0056355"}


id: GO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-methylmalonyl-CoA + H2O = CoA + H+ + methylmalonate.","definition_xrefs":["EC:3.1.2.17","RHEA:17345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"(S)-methylmalonyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:S-METHYLMALONYL-COA-HYDROLASE-RXN","KEGG_REACTION:R02764"],"synonyms":[{"name":"D-methylmalonyl-coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047511"}


id: PBO:0069447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 712, pseudogene","termid":"PBO:0069447"}


id: PATO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a horizontal surface without a slope, tilt, or curvature.","definition_xrefs":["web:http://www.merriam-webster.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flat","synonyms":[{"name":"plate-like","type":"related"}],"termid":"PATO:0000407"}


id: PBO:0113453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID Complex that binds directly to central component Vid30p; GID complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; Gid7p contains six WD40 repeats; localizes to peroxisomes in oleate-growing cells; computational analysis suggests that Gid7p and Moh1p have similar functions","termid":"PBO:0113453"}


id: PBO:0029238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitosis_with_unreplicated_DNA","termid":"PBO:0029238"}


id: GO:0072752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to rapamycin","termid":"GO:1901355"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rapamycin","termid":"GO:0072752"}


id: PBO:0029021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0029021"}


id: PBO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A1","termid":"PBO:0047132"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: PBO:0088274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase and TOR substrate adaptor Sin1","termid":"PBO:0088274"}


id: FYPO:0007451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:15809031","PMID:12789340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"},{"relation_name":"is_a","term_name":"normal protein localization to cell cortex of cell tip","termid":"FYPO:0006876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"normal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"normal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0007451"}


id: FYPO:0005650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal premeiotic DNA replication","termid":"FYPO:0002043"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of premeiotic DNA replication","synonyms":[{"name":"normal timing of premeiotic DNA replication","type":"related"}],"termid":"FYPO:0005650"}


id: PBO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rbp28","termid":"PBO:0002448"}


id: PBO:0075862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 1","termid":"PBO:0075862"}


id: PBO:0070038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1335, pseudogene","termid":"PBO:0070038"}


id: GO:1902701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.","definition_xrefs":["GO_REF:0000093","PMID:18727018","GOC:mengo_curators","GOC:TermGenie","PMID:19539744"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to propan-2-ol (obsolete GO:1902701)","synonyms":[{"name":"pentose breakdown to propan-2-ol","type":"exact"},{"name":"pentose catabolic process to isopropanol","type":"exact"},{"name":"pentose catabolic process to isopropyl alcohol","type":"exact"},{"name":"pentose catabolism to propan-2-ol","type":"exact"},{"name":"pentose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902701"}


id: PBO:0072787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 2, pseudogene","termid":"PBO:0072787"}


id: PBO:0059543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Lys (AAA/G)","termid":"PBO:0059543"}


id: PBO:0078283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 16-1","termid":"PBO:0078283"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: PBO:0076622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor D","termid":"PBO:0076622"}


id: PBO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.14","termid":"PBO:0001001"}


id: PBO:0052857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-17, pseudogene","termid":"PBO:0052857"}


id: PBO:0066602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1 pseudogene 1","termid":"PBO:0066602"}


id: FYPO:0007100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested in prophase I under conditions where arrest does not normally occur, and with telomeres clustered at the spindle pole body. Telomere clustering at the SPB indicates that the cell has reached or passed the pachytene stage.","definition_xrefs":["PomBase:mah","PMID:21449049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic prophase I with clustered telomeres","synonyms":[{"name":"abnormal cell cycle arrest in meiotic prophase I at or after pachytene","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at SPB","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at spindle pole bodies","type":"exact"}],"termid":"FYPO:0007100"}


id: PR:Q9UU87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase STK11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.01","secondary_identifiers":["UniProtKB:Q9UU87"],"synonyms":[{"name":"SPCC1919.01","type":"related"},{"name":"Spom972h-STK11","type":"exact"}],"termid":"PR:Q9UU87"}


id: GO:0009081
data:
  {"annotated_genes":["SJAG_02496","SJAG_00107","SJAG_04098","SJAG_04149","SJAG_02841","SJAG_00944","SJAG_06635","SJAG_00396","SJAG_00830","SJAG_03243","SJAG_03985","SJAG_03562"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"},{"annotations":[109764,87271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009097"},{"annotations":[84213,100323,106957,107619,87272,109765,99837,104842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[87273,106958,99838,97379,102708,106606,109766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[107620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006551"},{"annotations":[107621,109767,99839,87274,106959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[104612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_00944":null,"SJAG_02496":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"branched-chain amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"branched chain family amino acid metabolism","type":"exact"}],"termid":"GO:0009081","terms_by_termid":{"GO:0006551":null,"GO:0006574":null,"GO:0009097":null,"GO:0009098":null,"GO:0009099":null,"GO:1901705":null,"GO:1902114":null}}


id: GO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIId subcomplex (obsolete GO:0030088)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"exact"}],"termid":"GO:0030088"}


id: PR:O74452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scw1 gene.","definition_xrefs":["UniProtKB:O74452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity protein scw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.07","synonyms":[{"name":"Spom972h-scw1","type":"exact"},{"name":"strong cell wall protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74452"}


id: FYPO:0005719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture does not occur during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PMID:17881496","GO:1990942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0000138","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic metaphase chromosome recapture","synonyms":[{"name":"abolished chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abolished kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abolished mitotic kinetochore retrieval","type":"exact"},{"name":"abolished mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abolished mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"abolished mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abolished mitotic sister kinetochore recapture","type":"exact"},{"name":"mitotic metaphase chromosome recapture abolished","type":"exact"}],"termid":"FYPO:0005719"}


id: FYPO:0002788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles during vegetative growth","synonyms":[{"name":"decreased vacuole size during vegetative growth","type":"exact"},{"name":"reduced vacuole size during vegetative growth","type":"exact"},{"name":"small vacuoles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002788"}


id: PBO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component","termid":"PBO:0034039"}


id: PBO:0088674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Rod1","termid":"PBO:0088674"}


id: PBO:0057334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 521-1","termid":"PBO:0057334"}


id: PBO:0034781
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT overexpression expression profiling","termid":"PBO:0034781"}


id: PBO:0077479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200B","termid":"PBO:0077479"}


id: PBO:0027795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027795"}


id: GO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["PMID:16216911","RHEA:11388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["Reactome:R-HSA-9757706","EC:1.1.1.146","Reactome:R-HSA-9759259","Wikipedia:11beta-hydroxysteroid_dehydrogenase","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0070524"}


id: PBO:0062615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 3 pseudogene","termid":"PBO:0062615"}


id: PBO:0079040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-2","termid":"PBO:0079040"}


id: GO:0006599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphagen, any of a group of guanidine phosphates that occur in muscle and can be used to regenerate ATP from ADP during muscular contraction.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphagen metabolic process","synonyms":[{"name":"phosphagen metabolism","type":"exact"}],"termid":"GO:0006599"}


id: PBO:0044462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 61, pseudogene","termid":"PBO:0044462"}


id: PBO:0076658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 20","termid":"PBO:0076658"}


id: PBO:0028254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_G2_phase","termid":"PBO:0028254"}


id: GO:0160090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a guanosine in mRNA + S-adenosyl-L-methionine = an N(7)-methylguanosine in mRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:37379838","RHEA:60508","PMID:31031084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140098","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"internal mRNA (guanine-N7-)-methyltransferase activity","termid":"GO:0160090"}


id: PBO:0078787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-1","termid":"PBO:0078787"}


id: FYECO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes a rich growth medium, i.e. one in which not all constituent substances and their concentrations are specified, and some are present in excess.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping rich medium","termid":"FYECO:0000080"}


id: PR:O94707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.07","synonyms":[{"name":"Spom972h-rxt3","type":"exact"}],"termid":"PR:O94707"}


id: PR:Q9UTM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10855:SF1","PRO:DNx","OMA:SCHPO02037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn5 (Schizosaccharomyces pombe 972h-)","secondary_identifiers":["UniProtKB:Q9UTM3"],"synonyms":[{"name":"Spom972h-PSMD12","type":"exact"}],"termid":"PR:Q9UTM3"}


id: GO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylation at centromere (obsolete GO:0031066)","termid":"GO:0031066"}


id: PR:P07657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10422:SF6","OMA:SCHPO05073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.01","secondary_identifiers":["UniProtKB:P07657"],"synonyms":[{"name":"Spom972h-MT-CO1","type":"exact"},{"name":"cytochrome c oxidase polypeptide I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P07657"}


id: SO:1000075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the editing of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000075 sequence_variant_affecting_editing (obsolete SO:1000075)","synonyms":[{"name":"mutation affecting editing","type":"related"},{"name":"sequence variant affecting editing","type":"exact"}],"termid":"SO:1000075"}


id: PR:Q9HDY9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional repressor EMSY that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00762","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M cell-type agglutination protein mam3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP11E10.02c","secondary_identifiers":["UniProtKB:Q9HDY9"],"synonyms":[{"name":"Spom972h-EMSY","type":"exact"}],"termid":"PR:Q9HDY9"}


id: PBO:0056543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence-like 2","termid":"PBO:0056543"}


id: GO:0018377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a myristoyl group to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein myristoylation","secondary_identifiers":["GO:0018319"],"synonyms":[{"name":"protein amino acid myristoylation","type":"exact"}],"termid":"GO:0018377"}


id: GO:0052673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prenol + nucleoside triphosphate = prenyl phosphate + nucleoside diphosphate activity.","definition_xrefs":["GOC:ai","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prenol kinase activity","synonyms":[{"name":"prenol phosphotransferase activity","type":"exact"},{"name":"prenyl alcohol kinase activity","type":"exact"},{"name":"prenyl alcohol phosphotransferase activity","type":"exact"}],"termid":"GO:0052673"}


id: FYPO:0002945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is in G0 phase is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during G0","synonyms":[{"name":"increased RNA accumulation during G0","type":"related"},{"name":"increased RNA level during cell quiescence","type":"exact"},{"name":"increased RNA level during quiescence","type":"exact"},{"name":"increased transcript level during G0","type":"exact"}],"termid":"FYPO:0002945"}


id: PBO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15 (predicted)","termid":"PBO:0000407"}


id: PBO:0055183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2607","termid":"PBO:0055183"}


id: PBO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GRASP protein family Golgi protein (predicted)","termid":"PBO:0000502"}


id: PBO:0089414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipid homeostasis","termid":"PBO:0089414"}


id: FYPO:0002446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to oxidative stress","termid":"FYPO:0007620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002446"}


id: PBO:0111949
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0111949"}


id: PBO:0029208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_ubiquitination","termid":"PBO:0029208"}


id: GO:1905619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["PMID:15364955","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-(1->3)-fucosyltransferase activity","synonyms":[{"name":"regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905619"}


id: PBO:0085561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; similar to Gln3p and Dal80p; expression repressed by leucine","termid":"PBO:0085561"}


id: PBO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family, Sea2 (predicted)","termid":"PBO:0017663"}


id: FYECO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were subjected to nitrogen starvation for more than 7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping starvation and timing","termid":"FYECO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":">7 days nitrogen starvation","termid":"FYECO:0000240"}


id: GO:0016298
data:
  {"annotated_genes":["SJAG_04105","SJAG_01198","SJAG_02068","SJAG_02089","SJAG_02487","SJAG_00199","SJAG_02161","SJAG_01219","SJAG_03204","SJAG_02100","SJAG_04323","SJAG_00158","SJAG_02093","SJAG_04292","SJAG_01036","SJAG_02907","SJAG_01519","SJAG_03604","SJAG_02715","SJAG_04790","SJAG_04110","SJAG_04973","SJAG_02091","SJAG_02543","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95385],"is_not":false,"summary":null,"term":"GO:0016298"},{"annotations":[105345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052712"},{"annotations":[90493,111270,99523,88463,88455,97369,110574,86708,113487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[105346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[114088,94247,70434,77739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[94337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[89955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[88464,88456,97370,86709,96314,111271,99524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[89144,110358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004620"},{"annotations":[92502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[105347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"},{"annotations":[99901,100542,111586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[88469,86702,95042,90607,90494,111305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a lipid.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00199":null,"SJAG_00321":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02715":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null,"SJAG_04790":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"lipase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163402","Reactome:R-HSA-163432"],"termid":"GO:0016298","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0004771":null,"GO:0004806":null,"GO:0016298":null,"GO:0034479":null,"GO:0047372":null,"GO:0052712":null,"GO:0052714":null}}


id: GO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-CoA = acryloyl-CoA + NH3.","definition_xrefs":["EC:4.3.1.6","MetaCyc:BETA-ALANYL-COA-AMMONIA-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"beta-alanyl-CoA ammonia-lyase activity","secondary_identifiers":["RHEA:12416"],"synonyms":[{"name":"b-alanyl-CoA ammonia-lyase activity","type":"exact"},{"name":"beta-alanyl coenzyme A ammonia-lyase activity","type":"related"},{"name":"beta-alanyl-CoA ammonia-lyase (acryloyl-CoA-forming)","type":"related"}],"termid":"GO:0047698"}


id: PBO:0073043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 1","termid":"PBO:0073043"}


id: PBO:0079369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 3","termid":"PBO:0079369"}


id: GO:0045493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.","definition_xrefs":["GOC:go_curators","PMID:11931668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"xylan catabolic process","synonyms":[{"name":"xylan breakdown","type":"exact"},{"name":"xylan catabolism","type":"exact"},{"name":"xylan degradation","type":"exact"}],"termid":"GO:0045493"}


id: GO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of naphthalene to naphthalene 1,2-oxide.","definition_xrefs":["PMID:1981702","PMID:1742282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"naphthalene hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2F2","type":"narrow"}],"termid":"GO:0008399"}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_04509","SJAG_01794","SJAG_02379","SJAG_03453","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84486,87430,90048,86454,107890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: GO:2001219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001219)","synonyms":[{"name":"positive regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001219"}


id: PBO:0066690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of microtubule dynamics 1","termid":"PBO:0066690"}


id: FYPO:0003812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at protein-coding gene","termid":"FYPO:0007833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome positioning at stress response genes","synonyms":[{"name":"abnormal nucleosome occupancy at stress response genes","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003812"}


id: GO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protrusion that develops in the plasma membrane of a parasitized erythrocyte. An example of this component is found in Plasmodium species.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"infected host cell surface knob","termid":"GO:0020030"}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: PR:O14035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.14c gene.","definition_xrefs":["UniProtKB:O14035","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C29B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.14c","synonyms":[{"name":"Spom972h-SPAC29B12.14c","type":"exact"}],"termid":"PR:O14035"}


id: GO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidiophore stalk development","termid":"GO:0070799"}


id: PBO:0065271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 33","termid":"PBO:0065271"}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: PBO:0059124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPDU1 antisense RNA 1","termid":"PBO:0059124"}


id: FYPO:0001352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal in the vegetative growth phase of the life cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:mah","GO:0006325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromatin organization during vegetative growth","synonyms":[{"name":"abnormal chromatin organisation during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001352"}


id: PBO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 5B, oligomeric mucus/gel-forming","termid":"PBO:0060186"}


id: PBO:0080801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 7","termid":"PBO:0080801"}


id: PBO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYFIP related Rac1 interactor A","termid":"PBO:0044497"}


id: GO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-12","termid":"GO:0070671"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-12","synonyms":[{"name":"cellular response to IL-12","type":"exact"}],"termid":"GO:0071349"}


id: GO:0017188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + acetyl-CoA = N-acetyl-L-aspartate + CoA + H+.","definition_xrefs":["RHEA:14165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"aspartate N-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.17","Reactome:R-HSA-8954468","KEGG_REACTION:R00487","MetaCyc:ASPARTATE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-aspartate N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-aspartate N-acetyltransferase activity","type":"related"},{"name":"aspartate acetyltransferase activity","type":"related"}],"termid":"GO:0017188"}


id: PBO:0064882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit beta","termid":"PBO:0064882"}


id: PBO:0083932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in cell cycle progression; activates Cdc28p kinase to promote G1 to S phase transition; plays a role in regulating transcription of other G1 cyclins, CLN1 and CLN2; regulated by phosphorylation and proteolysis; acetyl-CoA induces CLN3 transcription in response to nutrient repletion to promote cell-cycle entry; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083932"}


id: PATO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or existing at the same time or having the same period or phase.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous","termid":"PATO:0000695"}


id: PBO:0064065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 99","termid":"PBO:0064065"}


id: PBO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase like 1","termid":"PBO:0071972"}


id: GO:0009721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an auxin stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to auxin","termid":"GO:0009733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of auxin stimulus","synonyms":[{"name":"perception of auxin stimulus","type":"related"}],"termid":"GO:0009721"}


id: PBO:0085850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of the vacuole; mutant has enhanced sensitivity to overexpression of mutant huntingtin; YMR160W is not an essential gene; relative distribution within the vacuolar membrane changes upon DNA replication stress","termid":"PBO:0085850"}


id: PBO:0089080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine methyltransferase, human SETD6 ortholog","termid":"PBO:0089080"}


id: GO:0030219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specializes features of a megakaryocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megakaryocyte differentiation","synonyms":[{"name":"megakaryocyte cell differentiation","type":"exact"}],"termid":"GO:0030219"}


id: PR:O13756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.06c","secondary_identifiers":["UniProtKB:O13756"],"synonyms":[{"name":"Spom972h-VPS8","type":"exact"},{"name":"vacuolar protein-targeting protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13756"}


id: PBO:0066156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 8, endonuclease","termid":"PBO:0066156"}


id: GO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as organelles fuse.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid tube assembly","termid":"GO:0060988"},{"relation_name":"part_of","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"lipid tube assembly involved in organelle fusion","synonyms":[{"name":"lipid tubulation involved in organelle fusion","type":"exact"}],"termid":"GO:0060989"}


id: GO:0034780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glyphosate + OH- = glyoxylate + aminomethylphosphonic acid + H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glyphosate dehydrogenase activity (obsolete GO:0034780)","termid":"GO:0034780"}


id: GO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-25 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vitamin D 25-hydroxylase activity","synonyms":[{"name":"calciferol 25-hydroxylase activity","type":"narrow"},{"name":"cholecalciferol 25-hydroxylase activity","type":"narrow"},{"name":"ergocalciferol 25-hydroxylase activity","type":"narrow"},{"name":"vitamin D2 25-hydroxylase activity","type":"narrow"}],"termid":"GO:0070643"}


id: PBO:0061175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 5-1","termid":"PBO:0061175"}


id: FYPO:0003325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methotrexate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to methotrexate","synonyms":[{"name":"resistance to methotrexate during mitotic cell cycle","type":"related"},{"name":"resistance to methotrexate during vegetative growth","type":"exact"},{"name":"resistant to methotrexate","type":"exact"}],"termid":"FYPO:0003325"}


id: GO:0061382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule tip cell. A Malpighian tubule tip cell is a mitogenic signaling cell that controls the proliferation of its neighboring cells.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:7821213","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule tip cell differentiation","termid":"GO:0061382"}


id: GO:0032419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of an lysosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of lysosome membrane (obsolete GO:0032419)","synonyms":[{"name":"extrinsic to lysosomal membrane","type":"exact"},{"name":"extrinsic to lysosome membrane","type":"exact"}],"termid":"GO:0032419"}


id: PR:Q09772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rdh54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.03c","secondary_identifiers":["UniProtKB:Q09772"],"synonyms":[{"name":"ATP-dependent helicase rdh54 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD54 protein homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54B","type":"exact"},{"name":"meiotically up-regulated gene 34 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09772"}


id: GO:0103032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-glycerate + NAD = H+ + 2-hydroxy-3-oxopropanoate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tartronate semialdehyde reductase activity (obsolete GO:0103032)","termid":"GO:0103032"}


id: GO:0099034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic endosome membrane (obsolete GO:0099034)","termid":"GO:0099034"}


id: PBO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase Pub2","termid":"PBO:0001735"}


id: GO:0046101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"hypoxanthine metabolic process","termid":"GO:0046100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hypoxanthine biosynthetic process","synonyms":[{"name":"hypoxanthine anabolism","type":"exact"},{"name":"hypoxanthine biosynthesis","type":"exact"},{"name":"hypoxanthine formation","type":"exact"},{"name":"hypoxanthine synthesis","type":"exact"}],"termid":"GO:0046101"}


id: PBO:0081827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 750","termid":"PBO:0081827"}


id: PBO:0030242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0030242"}


id: PBO:0068333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 40","termid":"PBO:0068333"}


id: PBO:0089000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Ltv1","termid":"PBO:0089000"}


id: PBO:0028907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028907"}


id: PATO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000712 bouts value (obsolete PATO:0000712)","termid":"PATO:0000712"}


id: PBO:0025471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-L ortholog Fta1","termid":"PBO:0025471"}


id: GO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"},{"relation_name":"positively_regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of non-professional antigen presenting cell antigen processing and presentation","synonyms":[{"name":"activation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"upregulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002621"}


id: GO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a methyl group to a glutamic acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamic acid methylation (obsolete GO:0018020)","termid":"GO:0018020"}


id: PBO:0029429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0029429"}


id: PBO:0114137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphite transmembrane transporter Ssu4","termid":"PBO:0114137"}


id: PBO:0061957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 13 pseudogene","termid":"PBO:0061957"}


id: GO:0004346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucopyranose 6-phosphate + H2O = D-glucose + phosphate. D-glucopyranose is also known as D-glucose 6-phosphate.","definition_xrefs":["EC:3.1.3.9","RHEA:16689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-terminal-phosphatase activity","termid":"GO:0050309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucose-6-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-71825","MetaCyc:RXN66-526","Reactome:R-HSA-3266566","KEGG_REACTION:R00303","Reactome:R-HSA-3282876","Reactome:R-HSA-3262512","Reactome:R-HSA-3274540"],"synonyms":[{"name":"D-glucose-6-phosphate phosphohydrolase activity","type":"related"},{"name":"glucose 6-phosphate phosphatase activity","type":"related"}],"termid":"GO:0004346"}


id: PBO:0066223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM26 antisense RNA 1","termid":"PBO:0066223"}


id: PBO:0045739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 2","termid":"PBO:0045739"}


id: PR:000045537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"Spom-spi1","type":"exact"}],"termid":"PR:000045537"}


id: PBO:0051666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein","termid":"PBO:0051666"}


id: FYPO:0001509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromatin","termid":"FYPO:0006163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin during vegetative growth","synonyms":[{"name":"normal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001509"}


id: PBO:0056252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL2 antisense RNA 1","termid":"PBO:0056252"}


id: PATO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"arched","termid":"PATO:0001594"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-arched","termid":"PATO:0002162"}


id: MOD:00382
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionyl-L-tyrosine dipeptide to form 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one.","definition_xrefs":["PubMed:11259412","RESID:AA0377","PubMed:15491166","PubMed:10852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","synonyms":[{"name":"3-(2-methylsulfanyl)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-amino-3,6-didehydropyrazin-2-ol","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"GFP-like chromoprotein asFP595 chromophore","type":"exact"},{"name":"L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"MOD:00382"}


id: PBO:0061996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily F member 1","termid":"PBO:0061996"}


id: FYPO:0003452
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"},{"relation_name":"output_of","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized protein","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"mislocalised protein","type":"exact"}],"termid":"FYPO:0003452","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: RO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports_or_maintains_localization_of","termid":"RO:0002313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports","termid":"RO:0002020"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: GO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolepyruvate = CO2 + indole acetaldehyde.","definition_xrefs":["MetaCyc:4.1.1.74-RXN","EC:4.1.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"indolepyruvate decarboxylase activity","secondary_identifiers":["RHEA:18017"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate carboxy-lyase [(2-indol-3-yl)acetaldehyde-forming]","type":"related"},{"name":"3-(indol-3-yl)pyruvate carboxy-lyase activity","type":"related"},{"name":"indol-3-yl-pyruvate carboxy-lyase activity","type":"related"},{"name":"indole-3-pyruvate decarboxylase activity","type":"related"}],"termid":"GO:0047434"}


id: PBO:0057949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3671","termid":"PBO:0057949"}


id: GO:1903034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to wounding.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:19164535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to wounding","synonyms":[{"name":"regulation of physiological response to wounding","type":"exact"}],"termid":"GO:1903034"}


id: GO:0032224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, cholinergic","synonyms":[{"name":"activation of synaptic transmission, cholinergic","type":"narrow"},{"name":"stimulation of synaptic transmission, cholinergic","type":"narrow"},{"name":"up regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"up-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"upregulation of synaptic transmission, cholinergic","type":"exact"}],"termid":"GO:0032224"}


id: MOD:01012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxidizes the disulfide bond of a cystine crosslink to form two cysteic acid residues.","definition_xrefs":["DeltaMass:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"L-cysteic acid (L-cysteine sulfonic acid)","termid":"MOD:00460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of disulfide crosslink in cystine to two cysteic acids","termid":"MOD:01012"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["UniProtKB:Q09714","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: PBO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a","termid":"PBO:0070535"}


id: GO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vibriobactin, the major siderophore produced by Vibrio cholerae.","definition_xrefs":["GOC:jl","PMID:11112537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibriobactin metabolic process","termid":"GO:0019536"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"vibriobactin biosynthetic process","secondary_identifiers":["GO:0031195","GO:0031196"],"synonyms":[{"name":"vibriobactin anabolism","type":"exact"},{"name":"vibriobactin biosynthesis","type":"exact"},{"name":"vibriobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"vibriobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"vibriobactin formation","type":"exact"},{"name":"vibriobactin synthesis","type":"exact"}],"termid":"GO:0019537"}


id: PBO:0065292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 2","termid":"PBO:0065292"}


id: PBO:0081564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 488","termid":"PBO:0081564"}


id: FYPO:0003052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:22582262","PMID:23117617","PMID:24173580","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"abnormal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"abnormal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"abnormal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003052"}


id: PBO:0087640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division","termid":"PBO:0087640"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: GO:0141222
data:
  {"annotated_genes":["SJAG_04186","SJAG_04039","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86642,100739,110934],"is_not":false,"summary":null,"term":"GO:0141222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + NAD+ + H2O = histone H3 L-lysine (position 14) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K4 to NAD, producing nicotinamide.","definition_xrefs":["PMID:20299449","PMID:23771057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0019213","GO:0003824","GO:0016746","GO:0033558","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141222","terms_by_termid":{"GO:0141222":null}}


id: GO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a RNA polymerase I (Pol I) enhancer in order to modulate transcription by RNA polymerase I.","definition_xrefs":["PMID:12865296","GOC:txnOH","PMID:8057832","PMID:14969726"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase I enhancer sequence-specific binding (obsolete GO:0001170)","synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding transcription factor activity","type":"exact"}],"termid":"GO:0001170"}


id: PBO:0046243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1","termid":"PBO:0046243"}


id: PR:Q9UU82
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are2 gene.","definition_xrefs":["UniProtKB:Q9UU82","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.05c","synonyms":[{"name":"Spom972h-are2","type":"exact"},{"name":"sterol-ester synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU82"}


id: PBO:0066535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 2","termid":"PBO:0066535"}


id: PBO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member A","termid":"PBO:0047159"}


id: MOD:01694
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an L-cysteine residue and the bioluminescent compound didehydrocoelenterazine to form S-(coelenterazin-3a-yl)-L-cysteine.","definition_xrefs":["PubMed:18997450","ChEBI:2311","RESID:AA0526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(coelenterazin-3a-yl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(4-hydroxyphenyl)(8-benzyl-3-oxo-6-[4-hydroxyphenyl]-3,7-dihydroimidazo[1,2-a]pyrazin-2-yl)methyl]sulfanyl)propanoic acid","type":"exact"},{"name":"MOD_RES S-(coelenterazin-3a-yl)cysteine","type":"exact"},{"name":"S-(coelenterazin-3a-yl)-L-cysteine","type":"exact"},{"name":"dehydrocoelenterazine cysteine adduct","type":"exact"},{"name":"symplectin chromophore","type":"exact"}],"termid":"MOD:01694"}


id: PBO:0068313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 1","termid":"PBO:0068313"}


id: GO:0047624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 5'-tetraphosphate + H2O = ATP + phosphate.","definition_xrefs":["MetaCyc:ADENOSINE-TETRAPHOSPHATASE-RXN","EC:3.6.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"adenosine-tetraphosphatase activity","secondary_identifiers":["RHEA:24500"],"synonyms":[{"name":"adenosine-tetraphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047624"}


id: GO:1900601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of endocrocin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"endocrocin catabolic process","synonyms":[{"name":"endocrocin breakdown","type":"exact"},{"name":"endocrocin catabolism","type":"exact"},{"name":"endocrocin degradation","type":"exact"}],"termid":"GO:1900601"}


id: PBO:0045662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY30 domain containing 2","termid":"PBO:0045662"}


id: PBO:0081458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 324B","termid":"PBO:0081458"}


id: GO:0016805
data:
  {"annotated_genes":["SJAG_04858","SJAG_01542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98811,93315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a dipeptide.","definition_xrefs":["PMID:19879002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01542":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0008233","GO:0140096"],"is_obsolete":false,"name":"dipeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5433067","Reactome:R-HSA-5693783","Reactome:R-HSA-266012","GO:0102008","MetaCyc:3.4.13.18-RXN","EC:3.4.13.-","Reactome:R-HSA-9026771"],"synonyms":[{"name":"cytosolic dipeptidase activity","type":"narrow"}],"termid":"GO:0016805","terms_by_termid":{"GO:0070573":null}}


id: SO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Complementary DNA; A piece of DNA copied from an mRNA and spliced into a vector for propagation in a suitable host.","direct_ancestors":[{"relation_name":"has_quality","term_name":"cDNA","termid":"SO:0000756"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA_clone","synonyms":[{"name":"cDNA clone","type":"exact"}],"termid":"SO:0000317"}


id: PBO:0091868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Stb3","termid":"PBO:0091868"}


id: GO:0008564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + protein+(in) -> ADP + phosphate + protein+(out); drives the concomitant secretion of proteins.","definition_xrefs":["PMID:30346996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0140318","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-exporting ATPase activity","secondary_identifiers":["EC:7.4.2.8","MetaCyc:3.6.3.50-RXN"],"synonyms":[{"name":"ATPase-coupled protein transporter activity","type":"exact"}],"termid":"GO:0008564"}


id: GO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic part (obsolete GO:0044444)","synonyms":[{"name":"cytoplasm component","type":"exact"}],"termid":"GO:0044444"}


id: PBO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PiF1 Helicase homolog","termid":"PBO:0004572"}


id: PR:A6X972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gon7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit gon7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.18","synonyms":[{"name":"Spom972h-gon7","type":"exact"}],"termid":"PR:A6X972"}


id: FYPO:0002532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002532"}


id: PBO:0086390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative checkpoint factor in transcription; binds to U2 snRNA and Prp11p; regulates toggling of the U2 snRNA stem II region between different structures; contains two RNA recognition motifs (RRMs)","termid":"PBO:0086390"}


id: GO:0070754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-35 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-35 production","termid":"GO:0070753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-35 production","secondary_identifiers":["GO:0070750"],"synonyms":[{"name":"regulation of IL-35 production","type":"exact"},{"name":"regulation of interleukin-35 biosynthetic process","type":"narrow"}],"termid":"GO:0070754"}


id: MOD:01949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a phenylalanine and two tyrosine residues to form coelenterazine.","definition_xrefs":["RESID:AA0595","PubMed:11572972","PubMed:10830969","ChEBI:2311","PubMed:19833098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coelenterazine","synonyms":[{"name":"8-benzyl-2-(4-hydroxybenzyl)-6-(4-hydroxyphenyl)imidazo[1,2-a]pyrazin-3(7H)-one","type":"exact"},{"name":"Oplophorus luciferin","type":"exact"},{"name":"coelenterazine","type":"exact"}],"termid":"MOD:01949"}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12542:SF7","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: FYPO:0007778
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115954],"is_not":false,"summary":null,"term":"FYPO:0007778"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae form fewer branched filaments than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02013":null},"genotype_count":1,"genotypes_by_uniquename":{"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"decreased hyphal branching","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013"],"single_locus_genotype_uniquenames":["pyp1delta"],"synonyms":[{"name":"decreased number of branched filaments","type":"exact"}],"termid":"FYPO:0007778","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007778":null,"FYPO_EXT:0000001":null}}


id: GO:0044612
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99539],"is_not":false,"summary":null,"term":"GO:0044612"}]},"cv_name":"cellular_component","definition":"A substructure of the nuclear pore complex (NPC) that serves to connect members of the central transport channel (composed of FG-nucleoporins) to the core scaffold (composed of the inner and outer NPC rings). In S. cerevisiae, the linkers are Nic96p and Nup82p. In vertebrates, they are Nup93 and Nup88. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. Both linkers can be isolated in association with specific FG-nucleoporins, complexes that are sometimes referred to as the Nic96 complex (Nic96p-Nsp1p-Nup49p-Nup57p) and the Nup82 complex (Nup82p-Nup116p-Nup159p-Gle2p).","definition_xrefs":["GOC:dgf","PMID:18046406","PMID:20947011","PMID:22419078","PMID:19524430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005643"],"is_obsolete":false,"name":"nuclear pore linkers","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nic96 complex","type":"related"},{"name":"Nup82 complex","type":"related"}],"termid":"GO:0044612","terms_by_termid":{"GO:0044612":null}}


id: GO:1905447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:PARL","PMID:23707074","GOC:bc","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"},{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905446"},{"relation_name":"negatively_regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"down regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"down-regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"downregulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"inhibition of mitochondrial ATP synthesis coupled electron transport","type":"narrow"}],"termid":"GO:1905447"}


id: PBO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kizuna centrosomal protein","termid":"PBO:0052429"}


id: GO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"endothelium development","termid":"GO:0003158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an endothelium","termid":"GO:0003159"}


id: PBO:0027066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_metabolic_process","termid":"PBO:0027066"}


id: PBO:0050711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 9","termid":"PBO:0050711"}


id: PBO:0042889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 418","termid":"PBO:0042889"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: GO:0019819
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P1 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they contain fewer peroxisomal proteins than the other subforms.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"P1 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019819"}


id: GO:0046889
data:
  {"annotated_genes":["SJAG_02613","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[106378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"positively_regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02613":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of lipid biosynthetic process","type":"narrow"},{"name":"positive regulation of lipid anabolism","type":"exact"},{"name":"positive regulation of lipid biosynthesis","type":"exact"},{"name":"positive regulation of lipid formation","type":"exact"},{"name":"positive regulation of lipid synthesis","type":"exact"},{"name":"positive regulation of lipogenesis","type":"exact"},{"name":"stimulation of lipid biosynthetic process","type":"narrow"},{"name":"up regulation of lipid biosynthetic process","type":"exact"},{"name":"up-regulation of lipid biosynthetic process","type":"exact"},{"name":"upregulation of lipid biosynthetic process","type":"exact"}],"termid":"GO:0046889","terms_by_termid":{"GO:0070452":null,"GO:1902648":null}}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: PBO:0078228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-3","termid":"PBO:0078228"}


id: PATO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy","termid":"PATO:0000454"}


id: PBO:0070969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 7","termid":"PBO:0070969"}


id: PBO:0074907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 78","termid":"PBO:0074907"}


id: PBO:0075599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS2 antisense RNA 1","termid":"PBO:0075599"}


id: PBO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Alp14","termid":"PBO:0090204"}


id: PBO:0110828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type, Loz1","termid":"PBO:0110828"}


id: PBO:0054830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2243","termid":"PBO:0054830"}


id: PBO:0057307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-2","termid":"PBO:0057307"}


id: PBO:0005583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil) methyltransferase (predicted)","termid":"PBO:0005583"}


id: PBO:0090043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism","termid":"PBO:0090043"}


id: GO:0033196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryparedoxin + hydrogen peroxide = tryparedoxin disulfide + H2O.","definition_xrefs":["GOC:mah","PMID:32388269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tryparedoxin peroxidase activity","secondary_identifiers":["MetaCyc:1.11.1.15-RXN"],"synonyms":[{"name":"TXNPx activity","type":"exact"}],"termid":"GO:0033196"}


id: PBO:0056222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D2","termid":"PBO:0056222"}


id: PBO:0061977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AQ member 1 pseudogene","termid":"PBO:0061977"}


id: PBO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 5","termid":"PBO:0051515"}


id: GO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to chronological cell aging, occurring in non-dividing cells.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in chronological cell aging (obsolete GO:0001305)","synonyms":[{"name":"progressive alteration of chromatin during chronological cell ageing","type":"related"},{"name":"progressive alteration of chromatin during chronological cell aging","type":"related"}],"termid":"GO:0001305"}


id: GO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of protein homodimerization activity","termid":"GO:0043496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein homodimerization activity","termid":"GO:0090074"}


id: GO:0033101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cellular bud.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cellular bud membrane","synonyms":[{"name":"cellular bud plasma membrane","type":"exact"}],"termid":"GO:0033101"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: FYPO:0004397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus is normal (i.e. indistinguishable from wild type). Export of all proteins or a specific protein may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear export","termid":"FYPO:0000509"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein export from nucleus during vegetative growth","synonyms":[{"name":"normal nucleocytoplasmic protein export during vegetative growth","type":"related"},{"name":"normal protein export from nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004397"}


id: PBO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; associates with rDNA chromatin in vivo; TBS1 has a paralog, HAL9, that arose from the whole genome duplication","termid":"PBO:0086019"}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["PMID:26473732","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: GO:0098787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of an immature mRNA transcript to produce one or more more mature mRNA transcripts, prior to translation into polypeptide.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage involved in mRNA processing (obsolete GO:0098787)","termid":"GO:0098787"}


id: PBO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_secondary_cell_septum_thickness","termid":"PBO:0035750"}


id: PBO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridylate synthase (predicted)","termid":"PBO:0000279"}


id: RO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}


id: GO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein N(tau)-phospho-L-histidine.","definition_xrefs":["EC:2.7.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein histidine tele-kinase activity","secondary_identifiers":["MetaCyc:2.7.13.2-RXN","RHEA:11860"],"synonyms":[{"name":"ATP:protein-L-histidine N-tele-phosphotransferase activity","type":"related"},{"name":"ATP:protein-L-histidine Ntau-phosphotransferase activity","type":"related"},{"name":"protein-histidine tele-kinase activity","type":"exact"}],"termid":"GO:0008257"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: FYPO:0006441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"increased protein kinase activity during cellular response to HU","type":"exact"}],"termid":"FYPO:0006441"}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["PMID:23093773","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: PBO:0076421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 2","termid":"PBO:0076421"}


id: GO:0003820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete class I major histocompatibility complex antigen (obsolete GO:0003820)","synonyms":[{"name":"class I major histocompatibility complex antigen","type":"exact"}],"termid":"GO:0003820"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:21734642","PMID:28966424","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: SO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor rearranged gene cluster","type":"exact"}],"termid":"SO:0000938"}


id: GO:0047367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin 3,3'-bissulfate + 3'-phosphoadenosine 5'-phosphosulfate = quercetin 3,3',7-trissulfate + adenosine 3',5'-bisphosphate.","definition_xrefs":["MetaCyc:2.8.2.28-RXN","EC:2.8.2.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quercetin-3,3'-bissulfate 7-sulfotransferase activity","secondary_identifiers":["RHEA:21860"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3,3'-bissulfate 7-sulfotransferase activity","type":"related"},{"name":"7-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3,3'/3,4'-disulfate 7-sulfotransferase activity","type":"related"},{"name":"flavonol 7-sulfotransferase activity","type":"related"},{"name":"quercetin-3,3'-bissulphate 7-sulphotransferase activity","type":"exact"}],"termid":"GO:0047367"}


id: GO:1990754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An action potential that occurs in a GABAergic neuron.","definition_xrefs":["PMID:16921370"],"gene_count":0,"genotype_count":0,"name":"obsolete GABAergic neuronal action potential (obsolete GO:1990754)","synonyms":[{"name":"GABAergic neuronal action potential","type":"exact"}],"termid":"GO:1990754"}


id: FYPO:0006354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcription during glucose starvation","synonyms":[{"name":"abnormal transcription during cellular response to glucose starvation","type":"exact"},{"name":"abnormal transcription during glucose depletion","type":"exact"},{"name":"abnormal transcription during glucose deprivation","type":"exact"},{"name":"abnormal transcription during glucose limitation","type":"related"},{"name":"abnormal transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0006354"}


id: PBO:0065947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component A","termid":"PBO:0065947"}


id: PATO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000421 nutritional value (obsolete PATO:0000421)","termid":"PATO:0000421"}


id: GO:0110061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["GOC:lf","PMID:28784619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: PBO:0084172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6B has a paralog, NHP6A, that arose from the whole genome duplication","termid":"PBO:0084172"}


id: GO:0019240
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94736],"is_not":false,"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrulline metabolic process","termid":"GO:0000052"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"citrulline biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CITRULBIO-PWY"],"synonyms":[{"name":"citrulline anabolism","type":"exact"},{"name":"citrulline biosynthesis","type":"exact"},{"name":"citrulline formation","type":"exact"},{"name":"citrulline synthesis","type":"exact"}],"termid":"GO:0019240","terms_by_termid":{"GO:0019240":null}}


