# terms

id: GO:0160183
data:
  {"annotated_genes":["SJAG_04991","SJAG_03170","SJAG_01073","SJAG_03435","SJAG_00079","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87000,95969,100923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[86556,111050,85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a target membrane and an autophagosome during autophagy.","definition_xrefs":["PMID:36635405","PMID:30544615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00079":null,"SJAG_01073":null,"SJAG_03170":null,"SJAG_03435":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"autophagosome-membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160183","terms_by_termid":{"GO:0140506":null,"GO:0140580":null}}


id: PBO:0042698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3B","termid":"PBO:0042698"}


id: PBO:0043389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 3","termid":"PBO:0043389"}


id: GO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophanamide + H2O = L-tryptophan + NH4.","definition_xrefs":["RHEA:11012","EC:3.5.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"tryptophanamidase activity","secondary_identifiers":["KEGG_REACTION:R00682","MetaCyc:TRYPTOPHANAMIDASE-RXN"],"synonyms":[{"name":"L-tryptophan aminopeptidase","type":"broad"},{"name":"L-tryptophanamide amidohydrolase activity","type":"related"},{"name":"tryptophan aminopeptidase","type":"broad"}],"termid":"GO:0050365"}


id: GO:0032448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region containing a hairpin. A hairpin structure forms when a DNA strand folds back on itself and intrachain base pairing occurs between inverted repeat sequences.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"DNA hairpin binding","termid":"GO:0032448"}


id: GO:0051174
data:
  {"annotated_genes":["SJAG_01402","SJAG_03170","SJAG_00685","SJAG_02380","SJAG_02613","SJAG_05314","SJAG_02785","SJAG_01187","SJAG_01906","SJAG_03940","SJAG_04422","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100920,86997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[75374,72453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[107897,111990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[106257,109259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[114036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[86279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[95599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[85799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[114504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00685":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_02785":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphorus metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphorus metabolism","type":"exact"}],"termid":"GO:0051174","terms_by_termid":{"GO:0006110":null,"GO:0010510":null,"GO:0043456":null,"GO:0045820":null,"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:1905706":null,"GO:1905857":null,"GO:2001211":null}}


id: GO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a hot temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thermoception","termid":"GO:0050955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of hot stimulus","termid":"GO:0062036"}


id: PBO:0049096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 153","termid":"PBO:0049096"}


id: GO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Kdo2-lipid A + phosphatidylethanolamine = phosphoethanolamine-Kdo2-lipid A + diacylglycerol.","definition_xrefs":["PMID:15795227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase activity","synonyms":[{"name":"EptB","type":"related"},{"name":"phosphoethanolamine transferase","type":"broad"}],"termid":"GO:0043838"}


id: SO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone modification.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_modification","synonyms":[{"name":"silenced by histone modification","type":"exact"}],"termid":"SO:0001221"}


id: GO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of the host TBK1-IKBKE-DDX3 complex.","definition_xrefs":["VZ:719"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TBK1-IKBKE-DDX3 complex activity (obsolete GO:0039659)","synonyms":[{"name":"inhibition of host TBK1-IKBKE-DDX3 complex by virus","type":"exact"},{"name":"suppression by virus of host TBK1-IKKE-DDX3 complex activity","type":"exact"}],"termid":"GO:0039659"}


id: PBO:0078402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 12-1","termid":"PBO:0078402"}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: PBO:0041203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blood vessel epicardial substance","termid":"PBO:0041203"}


id: FYPO:0006793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the specificity between a meiotic driver gene and a drive suppressor gene differs from that observed when both genes are wild type. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PomBase:mah","PMID:30475921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"altered meiotic drive suppression specificity","synonyms":[{"name":"abnormal meiotic drive suppression specificity","type":"exact"},{"name":"abnormal specificity of suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006793"}


id: PBO:0026929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026929"}


id: GO:0010418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the backbone structure of pectic rhamnogalacturonan II. The back bone contains at least 8 1,4-linked alpha-D-GalpA residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"},{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan II backbone metabolism","type":"exact"}],"termid":"GO:0010418"}


id: PBO:0091582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein","termid":"PBO:0091582"}


id: PBO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.3","termid":"PBO:0000692"}


id: PBO:0057757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1915 host gene","termid":"PBO:0057757"}


id: PBO:0112694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0112694"}


id: PBO:0087594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0087594"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["PMID:21246752","PMID:22786806","GOC:TermGenie","PMID:19959363"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: PBO:0071894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 32","termid":"PBO:0071894"}


id: PBO:0079493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC12 antisense RNA 1","termid":"PBO:0079493"}


id: GO:0030057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction in which: on the cytoplasmic surface of each interacting plasma membrane is a dense plaque composed of a mixture of intracellular anchor proteins; a bundle of keratin intermediate filaments is attached to the surface of each plaque; transmembrane adhesion proteins of the cadherin family bind to the plaques and interact through their extracellular domains to hold the adjacent membranes together by a Ca2+-dependent mechanism.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"desmosome","secondary_identifiers":["Wikipedia:Desmosome"],"synonyms":[{"name":"macula adherens","type":"exact"},{"name":"spot desmosome","type":"exact"}],"termid":"GO:0030057"}


id: GO:0072696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination within the telomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA recombination at telomere","synonyms":[{"name":"activation of telomeric recombination at telomere","type":"narrow"},{"name":"positive regulation of telomeric recombination","type":"exact"},{"name":"up regulation of telomeric recombination at telomere","type":"exact"},{"name":"up-regulation of telomeric recombination at telomere","type":"exact"},{"name":"upregulation of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0072696"}


id: PBO:0053106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer immune cell infiltration associated lncRNA","termid":"PBO:0053106"}


id: PBO:0041196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD13 homolog","termid":"PBO:0041196"}


id: PBO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.10","termid":"PBO:0000918"}


id: SO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_isopentenyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_isopentenyladenosine","secondary_identifiers":["RNAMOD:007"],"synonyms":[{"name":"2-methylthio-N6-isopentenyladenosine","type":"exact"},{"name":"ms2i6A","type":"exact"},{"name":"two methylthio N6 isopentenyladenosine","type":"exact"}],"termid":"SO:0001301"}


id: PBO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 26 pseudogene","termid":"PBO:0070112"}


id: FYPO:0004756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the initiation of DNA-dependent DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004756"}


id: PBO:0029559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cilofungin","termid":"PBO:0029559"}


id: PBO:0030499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_ionizing_radiation","termid":"PBO:0030499"}


id: PBO:0059384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 9","termid":"PBO:0059384"}


id: CHEBI:15741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic acid","termid":"CHEBI:15741"}


id: PBO:0067296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 381, pseudogene","termid":"PBO:0067296"}


id: PBO:0051856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 2","termid":"PBO:0051856"}


id: GO:1990955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded DNA.","definition_xrefs":["GOC:hjd","PMID:8493094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-rich single-stranded DNA binding","termid":"GO:1990955"}


id: GO:0034947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: terephthalate + H2O = benzoate + HCO3-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete terephthalate decarboxylase activity (obsolete GO:0034947)","termid":"GO:0034947"}


id: GO:0030587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp over time, from its formation to the mature structure. The process begins with the aggregation of individual cells and ends with the mature sorocarp. The sorocarp is a structure containing a spore-bearing sorus that sits on top of a stalk. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","ISBN:0521583640","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp development","synonyms":[{"name":"fruiting body development","type":"broad"},{"name":"fruiting body formation","type":"broad"},{"name":"sorocarp biosynthesis","type":"exact"},{"name":"sorocarp formation","type":"exact"}],"termid":"GO:0030587"}


id: PBO:0038721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 16","termid":"PBO:0038721"}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: GO:2000210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"positively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anoikis","synonyms":[{"name":"positive regulation of detachment induced cell death","type":"exact"},{"name":"positive regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000210"}


id: PBO:0068693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 74, pseudogene","termid":"PBO:0068693"}


id: PBO:0080864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 5","termid":"PBO:0080864"}


id: PBO:0036473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase His4","termid":"PBO:0036473"}


id: PBO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q11.2)","termid":"PBO:0047922"}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-7,8,13,14-tetrahydroprotoberberine = S-adenosyl-L-homocysteine + cis-N-methyl-(S)-7,8,13,14-tetrahydroprotoberberine.","definition_xrefs":["EC:2.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["RHEA:12805","MetaCyc:2.1.1.122-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: PBO:0072722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RXYLT1 antisense RNA 1","termid":"PBO:0072722"}


id: PBO:0083332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER152C","termid":"PBO:0083332"}


id: GO:0102700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = alpha-thujene + diphosphoric acid.","definition_xrefs":["MetaCyc:RXN-5105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-thujene synthase activity","termid":"GO:0102700"}


id: PATO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the back or upper surface of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised dorsally","termid":"PATO:0001919"}


id: PBO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase (predicted)","termid":"PBO:0002628"}


id: PBO:0056709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 1","termid":"PBO:0056709"}


id: GO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells.","definition_xrefs":["PMID:16678814","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"},{"relation_name":"negatively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of neuroepithelial cell differentiation","synonyms":[{"name":"negative regulation of neural plate formation","type":"narrow"},{"name":"repression of premature neural plate formation","type":"narrow"}],"termid":"GO:0002085"}


id: GO:0042709
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111480],"is_not":false,"summary":null,"term":"GO:0042709"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP or GTP.","definition_xrefs":["PMID:10671455","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"succinate-CoA ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042709","terms_by_termid":{"GO:0009361":null,"GO:0042709":null}}


id: GO:0097278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell killing caused by the membrane attack complex formed following complement activation.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement-dependent cytotoxicity","termid":"GO:0097278"}


id: PBO:0069728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1009, pseudogene","termid":"PBO:0069728"}


id: PBO:0004435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A","termid":"PBO:0004435"}


id: GO:0015120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphoglycerates from one side of a membrane to the other. Phosphoglycerates are important intermediates in glycolysis and 3-phosphoglycerate is a precursor in serine biosynthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate transmembrane transporter activity","termid":"GO:0015120"}


id: PBO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 165","termid":"PBO:0075116"}


id: GO:1903744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:25329901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle transport","termid":"GO:1902805"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"positively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"activation of anterograde synaptic vesicle transport","type":"narrow"},{"name":"up regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"up-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"upregulation of anterograde synaptic vesicle transport","type":"exact"}],"termid":"GO:1903744"}


id: GO:0016621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamaldehyde + CoA + NADP+ = cinnamoyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.2.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cinnamoyl-CoA reductase activity","secondary_identifiers":["MetaCyc:CINNAMOYL-COA-REDUCTASE-RXN","RHEA:10620"],"synonyms":[{"name":"cinnamaldehyde:NADP+ oxidoreductase (CoA-cinnamoylating)","type":"related"},{"name":"cinnamoyl CoA reductase activity","type":"exact"},{"name":"cinnamoyl-CoA:NADPH reductase activity","type":"related"},{"name":"cinnamoyl-coenzyme A reductase activity","type":"related"},{"name":"feruloyl coenzyme A reductase activity","type":"related"},{"name":"feruloyl-CoA reductase activity","type":"related"},{"name":"ferulyl-CoA reductase activity","type":"related"},{"name":"p-hydroxycinnamoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0016621"}


id: PBO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 5","termid":"PBO:0043877"}


id: FYPO:0006826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-fluorophenylalanine. Cells stop growing (and may die) at a concentration of 4-fluorophenylalanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 4-fluorophenylalanine","synonyms":[{"name":"hypersensitive to 4-fluorophenylalanine","type":"exact"},{"name":"sensitive to 4-fluorophenylalanine during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-fluorophenylalanine during vegetative growth","type":"exact"},{"name":"sensitive to p-fluoro-phenylalanine","type":"exact"},{"name":"sensitive to p-fluorophenylalanine","type":"exact"}],"termid":"FYPO:0006826"}


id: GO:0090122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cholesterol metabolic process in which cholesterol esters are hydrolyzed into free fatty acids and cholesterol in the lysosome that contributes to intracellular cholesterol transport.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"part_of","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0044281","GO:0006810","GO:0006629"],"is_obsolete":false,"name":"cholesterol ester hydrolysis involved in cholesterol transport","termid":"GO:0090122"}


id: _global:results_in_disappearance_of
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_ending_of","termid":"RO:0002552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_disappearance_of","termid":"_global:results_in_disappearance_of"}


id: PR:Q96VG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96VG3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.03","synonyms":[{"name":"Spom972h-SPAC683.03","type":"exact"}],"termid":"PR:Q96VG3"}


id: PBO:0070800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 30","termid":"PBO:0070800"}


id: PBO:0081516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 425","termid":"PBO:0081516"}


id: GO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cyclin-dependent protein kinase inhibitor p21WAF1/CIP1 bound to PCNA; formation of the complex inhibits DNA replication.","definition_xrefs":["GOC:mah","PMID:7911228","PMID:7915843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"PCNA-p21 complex","termid":"GO:0070557"}


id: GO:0019889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine metabolic process","synonyms":[{"name":"pteridine metabolism","type":"exact"}],"termid":"GO:0019889"}


id: PBO:0075382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX21 antisense divergent transcript 1","termid":"PBO:0075382"}


id: PBO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 6","termid":"PBO:0071272"}


id: PBO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone PARylation factor 1","termid":"PBO:0050533"}


id: PBO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0036468"}


id: FYPO:0004787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a DNA/DNA annealing activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"},{"relation_name":"is_a","term_name":"normal single-stranded DNA binding","termid":"FYPO:0004384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653","FYPO:0000654"],"is_obsolete":false,"name":"normal DNA/DNA annealing activity","termid":"FYPO:0004787"}


id: PBO:0062674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily A member 16","termid":"PBO:0062674"}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: GO:0019784
data:
  {"annotated_genes":["SJAG_00795","SJAG_00720","SJAG_05977","SJAG_00776","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86225,86226,91869,101821,105522,106861],"is_not":false,"summary":null,"term":"GO:0019784"}]},"cv_name":"molecular_function","definition":"An isopeptidase activity that cleaves NEDD8 from a target protein to which it is conjugated.","definition_xrefs":["GOC:mah","PMID:25628956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0140096","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"deNEDDylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690808","Reactome:R-HSA-8956040","Reactome:R-HSA-8956045","Reactome:R-HSA-8863723"],"synonyms":[{"name":"NEDD8-specific protease activity","type":"exact"}],"termid":"GO:0019784","terms_by_termid":{"GO:0019784":null}}


id: FYPO:0004750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated septated vegetative cell","synonyms":[{"name":"elongated septated cell during mitotic cell cycle","type":"related"},{"name":"elongated septated cells during vegetative growth","type":"exact"},{"name":"long septated cells","type":"exact"}],"termid":"FYPO:0004750"}


id: PBO:0086417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation; recruited by ribosomal proteins L17, L35, and L37 to assembling ribosomes after 27SB pre-rRNA is generated, immediately preceding removal of ITS2","termid":"PBO:0086417"}


id: GO:0061478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet aggregation inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platelet aggregation inhibitor","termid":"GO:0061478"}


id: PBO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMG1 N1-specific pseudouridine methyltransferase","termid":"PBO:0046276"}


id: PBO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-independent_of","termid":"PBO:0006181"}


id: GO:0010169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (200-800 kDa) multiprotein complex formed by 70-kDa and 5-kDa myrosinases, myrosinase- binding proteins (MBPs), MBP-related proteins and myrosinase-associated proteins. The complex has been identified in Brassica napus seeds.","definition_xrefs":["PMID:10682349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"thioglucosidase complex","synonyms":[{"name":"myrosinase complex","type":"exact"}],"termid":"GO:0010169"}


id: GO:0002659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction dependent upon immune response","termid":"GO:0002653"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"negatively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral tolerance induction","synonyms":[{"name":"down regulation of peripheral tolerance induction","type":"exact"},{"name":"down-regulation of peripheral tolerance induction","type":"exact"},{"name":"downregulation of peripheral tolerance induction","type":"exact"},{"name":"inhibition of peripheral tolerance induction","type":"narrow"}],"termid":"GO:0002659"}


id: SO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Seven nucleotide recombination site (e.g. CACAGTG), part of V-gene, D-gene or J-gene recombination feature of an immunoglobulin or T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","synonyms":[{"name":"HEPTAMER","type":"related"},{"name":"heptamer of recombination feature of vertebrate immune system gene","type":"exact"}],"termid":"SO:0000561"}


id: PBO:0085102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein putative transcription factor; required for growth of superficial pseudohyphae (which do not invade the agar substrate) but not for invasive pseudohyphal growth; may act together with Phd1p; potential Cdc28p substrate","termid":"PBO:0085102"}


id: PBO:0060969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit alpha pseudogene 1","termid":"PBO:0060969"}


id: PBO:0085249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perilipin, involved in formation and stability of lipid droplets; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange","termid":"PBO:0085249"}


id: PBO:0050772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 2","termid":"PBO:0050772"}


id: PBO:0055352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2781","termid":"PBO:0055352"}


id: PBO:0011075
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LEPROTL1 ortholog","termid":"PBO:0011075"}


id: PBO:0090219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC1A4.04 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090219"}


id: PBO:0045859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 49","termid":"PBO:0045859"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: GO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of the membrane attack complex components of the complement cascade which can result in death of a target cell through cytolysis.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of membrane attack complex","synonyms":[{"name":"MAC assembly","type":"exact"},{"name":"MAC formation","type":"exact"},{"name":"activation of MAC","type":"exact"},{"name":"activation of TCC","type":"narrow"},{"name":"activation of terminal complement complex","type":"narrow"},{"name":"activation of the terminal complement cascade","type":"narrow"},{"name":"membrane attack complex assembly","type":"exact"},{"name":"membrane attack complex formation","type":"exact"}],"termid":"GO:0001905"}


id: GO:0010099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of photomorphogenesis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photomorphogenesis","termid":"GO:0010099"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: PBO:0038695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 7","termid":"PBO:0038695"}


id: PBO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40","termid":"PBO:0090189"}


id: GO:0170021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a soluble compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:36828965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ionotropic taste receptor activity","termid":"GO:0170021"}


id: GO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction dependent on T cells which leads to immunological tolerance of a tumor.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"},{"relation_name":"is_a","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"},{"relation_name":"is_a","term_name":"peripheral T cell tolerance induction","termid":"GO:0002458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}


id: GO:0000290
data:
  {"annotated_genes":["SJAG_03157","SJAG_02213","SJAG_05694","SJAG_05010","SJAG_04880","SJAG_01625"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88129,102661,106412,106461,108525,109987],"is_not":false,"summary":null,"term":"GO:0000290"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_02213":null,"SJAG_03157":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-dependent decapping of nuclear mRNA","type":"exact"},{"name":"deadenylylation-dependent decapping","type":"exact"}],"termid":"GO:0000290","terms_by_termid":{"GO:0000290":null}}


id: GO:0046294
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92106,100022],"is_not":false,"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"},{"relation_name":"is_a","term_name":"cellular detoxification of aldehyde","termid":"GO:0110095"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0098754","GO:0008150"],"is_obsolete":false,"name":"formaldehyde catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde breakdown","type":"exact"},{"name":"formaldehyde catabolism","type":"exact"},{"name":"formaldehyde degradation","type":"exact"},{"name":"methanal catabolic process","type":"exact"},{"name":"methanal catabolism","type":"exact"}],"termid":"GO:0046294","terms_by_termid":{"GO:0046294":null}}


id: GO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of JNK cascade","termid":"GO:0046328"},{"relation_name":"negatively_regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JNK cascade","synonyms":[{"name":"down regulation of JNK cascade","type":"exact"},{"name":"down-regulation of JNK cascade","type":"exact"},{"name":"downregulation of JNK cascade","type":"exact"},{"name":"inhibition of JNK cascade","type":"narrow"}],"termid":"GO:0046329"}


id: FYPO:0001049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis when smaller than wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, small cell (obsolete FYPO:0001049)","synonyms":[{"name":"mitotic catastrophe, small cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, small cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001049"}


id: PBO:0079868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk like zinc finger","termid":"PBO:0079868"}


id: PR:O74729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11071:SF58","PRO:DNx","OMA:SCHPO02717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.04c","secondary_identifiers":["UniProtKB:O74729"],"synonyms":[{"name":"PPIase cyp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIH","type":"exact"},{"name":"rotamase cyp3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74729"}


id: GO:0099009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The circularization of a viral genome following infection of a host cell. This is common amongst bacterial viruses to protect the viral genome ends from nucleases, to convert the linear genome to an integrative precursor or to give rise to the replicative form of the genome. It can be mediated by covalent closure of the DNA sticky ends, recombinaison between redundant terminal sequences or via the binding of a protein at the viral DNA extremities.","definition_xrefs":["PMID:19523475","PMID:319596","PMID:15489417","PMID:11894948","VZ:3968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome circularization","termid":"GO:0099009"}


id: PBO:0070804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 34","termid":"PBO:0070804"}


id: GO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"positive regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"},{"name":"stimulation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of catecholamine uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051944"}


id: SO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cassette pseudogene is a kind of gene in an inactive form which may recombine at a telomeric locus to form a functional copy.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_pseudogene","synonyms":[{"name":"cassette pseudogene","type":"exact"},{"name":"cassette type psedogene","type":"related"}],"termid":"SO:0001434"}


id: GO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine-rich G-protein receptor-like receptor activity (obsolete GO:0001627)","synonyms":[{"name":"LGR-like receptor","type":"exact"},{"name":"leucine-rich G protein receptor-like receptor activity","type":"exact"},{"name":"leucine-rich G-protein receptor-like receptor activity","type":"exact"}],"termid":"GO:0001627"}


id: PBO:0048280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 15","termid":"PBO:0048280"}


id: PBO:0059091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 3","termid":"PBO:0059091"}


id: PBO:0089411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, human DHX29 ortholog","termid":"PBO:0089411"}


id: PBO:0085591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in biosynthesis of the coenzyme lipoic acid; has similarity to E. coli lipoic acid synthase","termid":"PBO:0085591"}


id: GO:0034133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"positive regulation of TLR1 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034133"}


id: PBO:0083817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of RNA polymerase III transcription factor (TFIIIB); TFIIIB is involved in transcription of genes encoding tRNAs, 5S rRNA, U6 snRNA, and other small RNAs","termid":"PBO:0083817"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: PBO:0045359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPEP2 neighbor","termid":"PBO:0045359"}


id: GO:1990458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipooligosaccharide. Lipooligosaccharides (LOSs) are the major glycolipids expressed on mucosal Gram-negative bacteria.","definition_xrefs":["PMID:8894399","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipooligosaccharide binding","synonyms":[{"name":"LOS binding","type":"related"},{"name":"endotoxin binding","type":"related"}],"termid":"GO:1990458"}


id: FYPO:0002031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cables is abnormal. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"},{"relation_name":"output_of","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cable morphology","synonyms":[{"name":"abnormal actin cable morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable morphology during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable morphology","type":"exact"},{"name":"disorganized actin cables","type":"exact"}],"termid":"FYPO:0002031"}


id: GO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"spermidine:coumaroyl CoA N-acyltransferase activity","termid":"GO:0080073"}


id: PBO:0075859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 7","termid":"PBO:0075859"}


id: PBO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8 like","termid":"PBO:0060532"}


id: GO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2B L-lysine (position 5) = CoA + histone H2B N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B acetyltransferase activity","termid":"GO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0034212","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone H2BK5 acetyltransferase activity","synonyms":[{"name":"histone acetylase activity (H2B-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2B-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2B-K5 specific)","type":"exact"}],"termid":"GO:0044014"}


id: GO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + putrescine = sym-homospermidine + propane-1,3-diamine.","definition_xrefs":["MetaCyc:2.5.1.45-RXN","EC:2.5.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"homospermidine synthase (spermidine-specific) activity","secondary_identifiers":["RHEA:11236"],"synonyms":[{"name":"spermidine:putrescine 4-aminobutyltransferase (propane-1,3-diamine-forming)","type":"related"}],"termid":"GO:0050514"}


id: FYPO:0006707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the movement of calcium ions from the cytosol to the endoplasmic reticulum is decreased.","definition_xrefs":["PomBase:mah","GO:1903515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased calcium ion transport from cytosol to endoplasmic reticulum","synonyms":[{"name":"decreased calcium ion transport from cytosol to ER during vegetative growth","type":"exact"},{"name":"decreased calcium ion transport from cytosol to endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"decreased calcium ion transport from cytosol to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"decreased calcium transport from cytosol to endoplasmic reticulum","type":"exact"},{"name":"reduced calcium ion transport from cytosol to endoplasmic reticulum during vegetative growth","type":"exact"}],"termid":"FYPO:0006707"}


id: PBO:0041842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 22","termid":"PBO:0041842"}


id: GO:0097106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:21525273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization organization","termid":"GO:0099084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postsynaptic density organization","synonyms":[{"name":"PSD organization","type":"exact"},{"name":"post synaptic density organization","type":"exact"},{"name":"post-synaptic density organization","type":"exact"},{"name":"postsynaptic density organisation","type":"exact"}],"termid":"GO:0097106"}


id: PBO:0050433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 4","termid":"PBO:0050433"}


id: PBO:0040624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 3","termid":"PBO:0040624"}


id: GO:0052779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino disaccharide, a disaccharide having one or more substituted or unsubstituted amino groups in place of hydroxy groups at unspecified positions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino disaccharide metabolic process","termid":"GO:0052779"}


id: GO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"}


id: GO:2000080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of canonical Wnt signaling pathway modulating the rate or frequency of pancreatic B cell proliferation.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation (obsolete GO:2000080)","synonyms":[{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:2000080"}


id: GO:0070137
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102657,86857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0008233","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like protein-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small conjugating protein-specific endopeptidase activity","type":"exact"}],"termid":"GO:0070137","terms_by_termid":{"GO:0070139":null}}


id: PBO:0044594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4","termid":"PBO:0044594"}


id: GO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, classical pathway in another organism (obsolete GO:0044637)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044637"}


id: GO:0042021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor complex binding","synonyms":[{"name":"GM-CSF complex binding","type":"exact"},{"name":"GMC-SF complex binding","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor complex binding","type":"exact"}],"termid":"GO:0042021"}


id: GO:0009194
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[112088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate biosynthetic process","termid":"GO:0009139"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate biosynthetic process","termid":"GO:0009188"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009194","terms_by_termid":{"GO:0006225":null,"GO:0046705":null}}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: PBO:0065212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin 2","termid":"PBO:0065212"}


id: GO:0032716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-7 production.","definition_xrefs":["GOC:mah","PMID:25962782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-7 production","termid":"GO:0032676"},{"relation_name":"negatively_regulates","term_name":"interleukin-7 production","termid":"GO:0032636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-7 production","secondary_identifiers":["GO:0150113","GO:0045412"],"synonyms":[{"name":"down regulation of interleukin-7 production","type":"exact"},{"name":"down-regulation of interleukin-7 production","type":"exact"},{"name":"downregulation of interleukin-7 production","type":"exact"},{"name":"inhibition of interleukin-7 production","type":"narrow"},{"name":"negative regulation of IL-7 production","type":"exact"},{"name":"negative regulation of interleukin-7 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-7 secretion","type":"narrow"}],"termid":"GO:0032716"}


id: PBO:0080219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide","termid":"PBO:0080219"}


id: PR:Q9HGN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translocation protein SEC63 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03255","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec63 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.03","secondary_identifiers":["UniProtKB:Q9HGN7"],"synonyms":[{"name":"Spom972h-SEC63","type":"exact"}],"termid":"PR:Q9HGN7"}


id: PBO:0059190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member F","termid":"PBO:0059190"}


id: FYPO:0001617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular isoleucine level","synonyms":[{"name":"decreased cellular L-isoleucine level","type":"exact"},{"name":"decreased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"decreased level of isoleucine in cell","type":"exact"},{"name":"reduced cellular isoleucine level","type":"exact"},{"name":"reduced level of isoleucine in cell","type":"exact"}],"termid":"FYPO:0001617"}


id: PBO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein Bis1","termid":"PBO:0005155"}


id: PBO:0041929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 4","termid":"PBO:0041929"}


id: PBO:0073869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 5","termid":"PBO:0073869"}


id: PBO:0055424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2854","termid":"PBO:0055424"}


id: PBO:0112004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin adaptor for Prw1-Clr6 REX1BD","termid":"PBO:0112004"}


id: PR:Q9HDU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dTDP-D-glucose 4,6-dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.11","secondary_identifiers":["UniProtKB:Q9HDU4"],"synonyms":[{"name":"Spom972h-TGDS","type":"exact"}],"termid":"PR:Q9HDU4"}


id: GO:0140464
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87925],"is_not":false,"summary":null,"term":"GO:0140464"}]},"cv_name":"biological_process","definition":"The localization of silent mating-type cassette heterochromatin at a specific location in the nucleus.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"subnuclear spatial organization of silent mating-type cassette heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"silent mating-type cassette heterochromatin organization","type":"related"},{"name":"silent mating-type cassette heterochromatin spatial organization in the nucleus","type":"exact"}],"termid":"GO:0140464","terms_by_termid":{"GO:0140464":null}}


id: PBO:0016079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane organization protein Fhn1","termid":"PBO:0016079"}


id: FYPO:0000076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nystatin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to nystatin","synonyms":[{"name":"resistance to nystatin during mitotic cell cycle","type":"related"},{"name":"resistance to nystatin during vegetative growth","type":"exact"},{"name":"resistant to nystatin","type":"exact"}],"termid":"FYPO:0000076"}


id: PBO:0051047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-26","termid":"PBO:0051047"}


id: PBO:0035708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035708"}


id: MOD:00073
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-methyl-L-methionine.","definition_xrefs":["PubMed:323502","DeltaMass:169","PubMed:3298225","RESID:AA0064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated methionine","termid":"MOD:01463"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-methionine","synonyms":[{"name":"(2S)-2-methylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-methylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"MOD_RES N-methylmethionine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methyl Methionyl","type":"exact"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-methionine","type":"exact"},{"name":"N-methylated L-methionine","type":"exact"},{"name":"N-methylmethionine","type":"exact"},{"name":"NMe1Met","type":"exact"}],"termid":"MOD:00073"}


id: MOD:01663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(ADP-ribosyl)-L-threonine.","definition_xrefs":["RESID:AA0519","PubMed:20185726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-butanoic acid","type":"exact"},{"name":"O-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-threonine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-threonine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01663"}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: GO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + coenzyme M + coenzyme B = succinate + coenzyme M + coenzyme B + heterodisulfide.","definition_xrefs":["PMID:2509466"],"gene_count":0,"genotype_count":0,"name":"obsolete thiol-driven fumarate reductase activity (obsolete GO:0043830)","termid":"GO:0043830"}


id: PBO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 2","termid":"PBO:0044305"}


id: GO:0019453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, via the intermediate cystine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine","synonyms":[{"name":"L-cysteine breakdown via cystine","type":"exact"},{"name":"L-cysteine degradation via cystine","type":"exact"}],"termid":"GO:0019453"}


id: MOD:00249
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks two L-cysteine residues to form L-cysteine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-sulfanylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-sulfanylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Cys-Cys)","type":"exact"},{"name":"L-cysteine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00249"}


id: MOD:00765
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(L-cysteinyl)-L-cysteine, forming a disulfide bond with free cysteine.","definition_xrefs":["Unimod:312","PubMed:3083866","PubMed:2076469","PubMed:2001356","PubMed:366603","PubMed:8344916","PubMed:7918467","DeltaMass:260","PubMed:1988019","RESID:AA0025#CYS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinylation (disulfide with free L-cysteine)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cysteinylation","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"MOD_RES S-cysteinyl cysteine","type":"exact"},{"name":"S-cystenyl cystenyl","type":"exact"},{"name":"SCysCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00765"}


id: PBO:0080297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 61 pseudogene","termid":"PBO:0080297"}


id: PBO:0027549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_non-fermentable_carbon_source","termid":"PBO:0027549"}


id: PBO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex beta subunit Tfg2 (predicted)","termid":"PBO:0003070"}


id: PBO:0042107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 180","termid":"PBO:0042107"}


id: FYPO:0006838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which linear element maturation is abnormal. Linear element maturation is the close association of assembled LinE complexes with chromatin during meiotic prophase to form mature linear elements.","definition_xrefs":["PomBase:mah","PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element assembly","termid":"FYPO:0000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal linear element maturation","synonyms":[{"name":"LinE chromosome loading","type":"exact"},{"name":"LinE focus formation","type":"exact"}],"termid":"FYPO:0006838"}


id: SO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_left_handed_three","synonyms":[{"name":"catmat-3l","type":"exact"}],"termid":"SO:0100004"}


id: PBO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_organization","termid":"PBO:0030868"}


id: GO:0043609
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85798],"is_not":false,"summary":null,"term":"GO:0043609"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of carbon utilization.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"carbon utilization","termid":"GO:0015976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of carbon utilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043609","terms_by_termid":{"GO:0043609":null}}


id: PBO:0087300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin, histone H3 deacetylase; involved along with Hst4p in telomeric silencing, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; member of the Sir2 family of NAD(+)-dependent protein deacetylases","termid":"PBO:0087300"}


id: GO:0006246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTDP, deoxyribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTDP metabolic process","termid":"GO:0046072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dTDP catabolic process","synonyms":[{"name":"dTDP breakdown","type":"exact"},{"name":"dTDP catabolism","type":"exact"},{"name":"dTDP degradation","type":"exact"}],"termid":"GO:0006246"}


id: FYPO:0005363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle kinetochore microtubule depolymerization, occurs to a lesser extent than normal during mitotic chromosome recapture.","definition_xrefs":["PomBase:mah","PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000054","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased kinetochore microtubule catastrophe during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased kinetochore microtubule depolymerisation during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased kinetochore microtubule shrinkage during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during kinetochore retrieval","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to SPB","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during sister kinetochore recapture","type":"exact"},{"name":"reduced kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0005363"}


id: PATO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that has been constantly realizing some of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active","termid":"PATO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutively active","termid":"PATO:0002356"}


id: PR:Q10492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnn1 gene.","definition_xrefs":["UniProtKB:Q10492","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.02","synonyms":[{"name":"Spom972h-pnn1","type":"exact"}],"termid":"PR:Q10492"}


id: GO:0032594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein from one location to another within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"protein transport within lipid bilayer","synonyms":[{"name":"protein translocation within membrane","type":"exact"},{"name":"receptor translocation within membrane","type":"narrow"},{"name":"receptor transport within lipid bilayer","type":"narrow"}],"termid":"GO:0032594"}


id: GO:1901254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intracellular transport of viral material.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport of viral material","termid":"GO:1901252"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular transport of viral material","synonyms":[{"name":"activation of egress of virus within host cell","type":"narrow"},{"name":"activation of movement of virus within host cell","type":"exact"},{"name":"activation of viral egress","type":"exact"},{"name":"positive regulation of egress of virus within host cell","type":"related"},{"name":"positive regulation of movement of virus within host cell","type":"exact"},{"name":"positive regulation of viral egress","type":"exact"},{"name":"up regulation of egress of virus within host cell","type":"exact"},{"name":"up regulation of movement of virus within host cell","type":"exact"},{"name":"up regulation of viral egress","type":"exact"},{"name":"up-regulation of egress of virus within host cell","type":"exact"},{"name":"up-regulation of movement of virus within host cell","type":"exact"},{"name":"up-regulation of viral egress","type":"exact"},{"name":"upregulation of egress of virus within host cell","type":"exact"},{"name":"upregulation of movement of virus within host cell","type":"exact"},{"name":"upregulation of viral egress","type":"exact"}],"termid":"GO:1901254"}


id: GO:0150019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a basal dendrite are generated and organized.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"basal dendrite development","termid":"GO:0150018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite morphogenesis","termid":"GO:0150019"}


id: PBO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXB","termid":"PBO:0060344"}


id: PBO:0067160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 213, pseudogene","termid":"PBO:0067160"}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: PBO:0041185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 9","termid":"PBO:0041185"}


id: PBO:0059561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1E","termid":"PBO:0059561"}


id: FYPO:0000098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to calcium","synonyms":[{"name":"hypersensitive to calcium","type":"exact"},{"name":"sensitive to calcium chloride","type":"narrow"},{"name":"sensitive to calcium during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions","type":"exact"}],"termid":"FYPO:0000098"}


id: PBO:0108556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific complex subunit Clr6","termid":"PBO:0108556"}


id: PBO:0069219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 474, pseudogene","termid":"PBO:0069219"}


id: PBO:0054475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1875","termid":"PBO:0054475"}


id: PBO:0066353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 1","termid":"PBO:0066353"}


id: GO:0002809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide production","termid":"GO:0002787"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"down regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"downregulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"inhibition of antibacterial peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002809"}


id: GO:0033070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of ansamycins, any of a group of complex macrolactam compounds characterized by a cyclic structure in which an aliphatic ansa chain forms a bridge between two non-adjacent positions of a cyclic p-system; many exhibit antibacterial, antifungal or antitumor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ansamycin metabolic process","termid":"GO:0033069"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ansamycin biosynthetic process","synonyms":[{"name":"ansamycin anabolism","type":"exact"},{"name":"ansamycin biosynthesis","type":"exact"},{"name":"ansamycin formation","type":"exact"},{"name":"ansamycin synthesis","type":"exact"}],"termid":"GO:0033070"}


id: FYPO:0003041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of small nuclear RNA (snRNA) primary transcripts is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"decreased snRNA splicing","synonyms":[{"name":"decreased snRNA primary transcript RNA splicing","type":"exact"},{"name":"decreased snRNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA splicing during vegetative growth","type":"exact"},{"name":"increased snRNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced snRNA splicing","type":"exact"}],"termid":"FYPO:0003041"}


id: GO:1901310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["GOC:TermGenie","PMID:16525117","PMID:15899885"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901310)","synonyms":[{"name":"activation of SREBP cleavage","type":"exact"},{"name":"activation of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"positive regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"up-regulation of SREBP cleavage","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"upregulation of SREBP cleavage","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein cleavage","type":"exact"}],"termid":"GO:1901310"}


id: PBO:0086139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mitochondrial ribosome small subunit biogenesis; null mutant is defective in respiration and in maturation of 15S rRNA; protein is localized to the mitochondrial inner membrane; null mutant interacts synthetically with prohibitin (Phb1p)","termid":"PBO:0086139"}


id: PBO:0027858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027858"}


id: PBO:0046038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 6","termid":"PBO:0046038"}


id: GO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"negatively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"down regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through embryonic mitotic cell cycle","type":"narrow"},{"name":"negative regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"negative regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through embryonic mitotic cell cycle","type":"exact"}],"termid":"GO:0045976"}


id: GO:0035806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that affects blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of blood coagulation in another organism","synonyms":[{"name":"modulation by organism of blood clotting in other organism","type":"exact"},{"name":"modulation by organism of blood coagulation in other organism","type":"exact"},{"name":"modulation of blood coagulation in another organism","type":"exact"},{"name":"modulation of blood coagulation in other organism","type":"exact"},{"name":"perturbation of blood clotting in another organism","type":"exact"},{"name":"regulation by organism of blood clotting in other organism","type":"exact"},{"name":"regulation of blood clotting in other organism","type":"exact"},{"name":"regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035806"}


id: GO:1904363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11278900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of calcitonin secretion","termid":"GO:1904362"},{"relation_name":"negatively_regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcitonin secretion","synonyms":[{"name":"down regulation of calcitonin secretion","type":"exact"},{"name":"down-regulation of calcitonin secretion","type":"exact"},{"name":"downregulation of calcitonin secretion","type":"exact"},{"name":"inhibition of calcitonin secretion","type":"narrow"}],"termid":"GO:1904363"}


id: PBO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036097"}


id: PBO:0054316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1708","termid":"PBO:0054316"}


id: PBO:0089675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 catalytic subunit Sds21","termid":"PBO:0089675"}


id: PBO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 3","termid":"PBO:0044029"}


id: PBO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (predicted)","termid":"PBO:0005499"}


id: GO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins following the induction of and contributing to an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:11205333","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic hypermutation of immunoglobulin genes","termid":"GO:0016446"},{"relation_name":"part_of","term_name":"B cell affinity maturation","termid":"GO:0002344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic hypermutation of antibody genes during immune response","type":"related"},{"name":"somatic hypermutation of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002205"}


id: PBO:0058643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6772","termid":"PBO:0058643"}


id: PBO:0064450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocalyxin like 2","termid":"PBO:0064450"}


id: SO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of exonic sequence of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_exon_variant","synonyms":[{"name":"5 prime UTR exon variant","type":"exact"}],"termid":"SO:0002092"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: PBO:0058511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-1","termid":"PBO:0058511"}


id: GO:1905165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysosomal protein catabolic process.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:23499937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process in the vacuole","termid":"GO:1904350"},{"relation_name":"regulates","term_name":"lysosomal protein catabolic process","termid":"GO:1905146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of lysosomal protein catabolic process","synonyms":[{"name":"regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"regulation of lysosomal protein catabolism","type":"exact"},{"name":"regulation of lysosomal protein degradation","type":"exact"},{"name":"regulation of lysosomal proteolysis","type":"related"},{"name":"regulation of proteolysis within lysosome","type":"related"}],"termid":"GO:1905165"}


id: PBO:0028854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_glucose_starvation","termid":"PBO:0028854"}


id: FYPO:0002534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleoplasm","termid":"FYPO:0002531"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","termid":"FYPO:0002533"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide","termid":"FYPO:0004835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002534"}


id: GO:0050822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide stabilization","synonyms":[{"name":"peptide stabilisation","type":"exact"},{"name":"peptide stabilization activity","type":"related"}],"termid":"GO:0050822"}


id: GO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region that surrounds the active zone of the presynaptic plasma membrane, and is specialized for the control of synaptic development.","definition_xrefs":["GOC:sart","PMID:10976048","PMID:18439406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic periactive zone","synonyms":[{"name":"periactive zone","type":"exact"},{"name":"pre-synaptic periactive zone","type":"exact"}],"termid":"GO:0036062"}


id: PBO:0052178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 9","termid":"PBO:0052178"}


id: GO:0044720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived wing size","termid":"GO:0044720"}


id: PBO:0074719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 79","termid":"PBO:0074719"}


id: GO:0008042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An iron-sulfur protein that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete iron-sulfur electron transfer carrier (obsolete GO:0008042)","synonyms":[{"name":"ferredoxin","type":"narrow"},{"name":"iron-sulfur electron transfer carrier","type":"exact"},{"name":"iron-sulphur electron transfer carrier","type":"exact"}],"termid":"GO:0008042"}


id: GO:0032392
data:
  {"annotated_genes":["SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044806"}]},"cv_name":"biological_process","definition":"The process in which a transformation is induced in the geometry of a DNA double helix, resulting in a change in twist, writhe, or both, but with no change in linking number. Includes the unwinding of double-stranded DNA by helicases.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA geometric change","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032392","terms_by_termid":{"GO:0044806":null}}


id: GO:0102911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-secoisolariciresinol + NAD = H+ + (-)-lactol + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secoisolariciresinol dehydrogenase activity (obsolete GO:0102911)","termid":"GO:0102911"}


id: SO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes non-coding exon sequence in a non-coding transcript.","definition_xrefs":["EBI:fc","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"},{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_exon_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"ANNOVAR:ncRNA_exonic","type":"narrow"},{"name":"Jannovar:non_coding_transcript_exon_variant","type":"narrow"},{"name":"Seattleseq:non-coding-exon","type":"exact"},{"name":"Seattleseq:non-coding-exon-near-splice","type":"related"},{"name":"VEP:non_coding_transcript_exon_variant","type":"exact"},{"name":"non coding transcript exon variant","type":"exact"},{"name":"non_coding_transcript_exon_variant","type":"exact"},{"name":"snpEff:non_coding_exon_variant","type":"exact"}],"termid":"SO:0001792"}


id: PBO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 33","termid":"PBO:0045843"}


id: PBO:0110156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit, nuclear envelope specific subunit Cmp7","termid":"PBO:0110156"}


id: GO:0035036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial contact step made between the sperm plasma membrane and outer layer of the egg during fertilization.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm-egg recognition","termid":"GO:0035036"}


id: PATO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphology","termid":"PATO:0000051"}


id: PR:Q10198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein NDC80 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10643:SF0","OMA:SCHPO03670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein ndc80 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.03","secondary_identifiers":["UniProtKB:Q10198"],"synonyms":[{"name":"NMS complex subunit ndc80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDC80","type":"exact"}],"termid":"PR:Q10198"}


id: PBO:0091197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly","termid":"PBO:0091197"}


id: PBO:0048307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 17","termid":"PBO:0048307"}


id: PBO:0070242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 182 pseudogene","termid":"PBO:0070242"}


id: PBO:0046175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK2B, pseudogene","termid":"PBO:0046175"}


id: PBO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as dubious","termid":"PBO:0000199"}


id: PBO:0084319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; involved in nuclear import and export of proteins, including import of replication protein A and export of Far1p and transcription factors Swi5p, Swi6p, Msn2p, and Pho4p; required for re-export of mature tRNAs after their retrograde import from the cytoplasm; exportin-5 homolog","termid":"PBO:0084319"}


id: GO:0032966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"negatively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen biosynthetic process","synonyms":[{"name":"negative regulation of collagen anabolism","type":"exact"},{"name":"negative regulation of collagen biosynthesis","type":"exact"},{"name":"negative regulation of collagen formation","type":"exact"},{"name":"negative regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032966"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxosuccinamate.","definition_xrefs":["MetaCyc:PWY-4002","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: CHEBI:29014
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordycepin","termid":"CHEBI:29014"}


id: PBO:0087231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seipin involved in lipid droplet (LD) assembly; controls lipid particle morphology, number, and size; promotes initiation of LD formation on the ER; ensures that LDs bud from the ER towards the cytosolic side of the membrane; forms a complex with Ldb16p at ER-LD contact sites, stabilizing these sites; null mutants have localized accumulation of phosphatidic acid (PA) marker proteins; BSCL2, human homolog implicated in congenital lipodystrophy, complements yeast null mutant","termid":"PBO:0087231"}


id: FYPO:0004754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle during mitosis","synonyms":[{"name":"abolished protein localization to mitotic spindle during mitotic M phase","type":"related"},{"name":"abolished protein localization to mitotic spindle during mitotic M-phase","type":"related"},{"name":"abolished protein localization to mitotic spindle during mitotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during mitosis","type":"exact"},{"name":"protein absent from mitotic spindle during mitosis","type":"related"},{"name":"protein localisation to mitotic spindle abolished during mitosis","type":"exact"},{"name":"protein localization to mitotic spindle abolished during mitosis","type":"exact"},{"name":"protein localization to spindle abolished during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0004754"}


id: GO:0051639
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101673],"is_not":false,"summary":null,"term":"GO:0051639"}]},"cv_name":"biological_process","definition":"The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin filament network formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin gel biosynthesis","type":"exact"},{"name":"actin gel formation","type":"exact"}],"termid":"GO:0051639","terms_by_termid":{"GO:0051639":null}}


id: PBO:0057033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 128-1","termid":"PBO:0057033"}


id: PBO:0078768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 1-1","termid":"PBO:0078768"}


id: PBO:0079643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 16","termid":"PBO:0079643"}


id: GO:0031755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-2 lysophosphatidic acid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Edg-2 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-2 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA1 receptor binding","type":"exact"}],"termid":"GO:0031755"}


id: GO:1901660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion out of a cell or organelle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium ion export","termid":"GO:1901660"}


id: GO:0047157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [myelin proteolipid] + palmityl-CoA = [myelin proteolipid] O-palmitoylprotein + CoA.","definition_xrefs":["PMID:3818589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"myelin-proteolipid O-palmitoyltransferase activity","secondary_identifiers":["EC:2.3.1.100","MetaCyc:2.3.1.100-RXN"],"synonyms":[{"name":"[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"},{"name":"acyl-protein synthase activity","type":"broad"},{"name":"myelin PLP acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"}],"termid":"GO:0047157"}


id: GO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by ER resident proteases contributing to antigen processing and presentation.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis within endoplasmic reticulum associated with antigen processing and presentation","synonyms":[{"name":"ER proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"endoplasmic reticulum proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"proteolysis within ER associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002498"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: SO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A germline immunoglobulin gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene","termid":"SO:0002121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin_gene","synonyms":[{"name":"All_IG_genes","type":"exact"},{"name":"IG_genes","type":"exact"}],"termid":"SO:0002122"}


id: GO:0007417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["ISBN:0582227089","GOC:bf","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system development","secondary_identifiers":["Wikipedia:Neural_development"],"synonyms":[{"name":"CNS development","type":"exact"}],"termid":"GO:0007417"}


id: GO:0017158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"}


id: PBO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-4-phosphate 5-kinase Its3","termid":"PBO:0002350"}


id: PATO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part = n, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has normal numbers of parts of type","synonyms":[{"name":"having physical part","type":"exact"}],"termid":"PATO:0001905"}


id: PBO:0086903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative tubulin tyrosine ligase associated with P-bodies; may have a role in mRNA metabolism; yeast knockout collection strain identified as a pby1 null mutant is actually wild-type for PBY1 and deleted for mms4","termid":"PBO:0086903"}


id: PBO:0079206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressing subtransferable candidate 2 (pseudogene)","termid":"PBO:0079206"}


id: PBO:0081735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 667","termid":"PBO:0081735"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: PBO:0062635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 2 pseudogene","termid":"PBO:0062635"}


id: GO:0090389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome as a part of apoptotic cell clearance.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome-lysosome fusion","termid":"GO:0090385"},{"relation_name":"part_of","term_name":"phagolysosome assembly involved in apoptotic cell clearance","termid":"GO:0090387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0044085","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"phagosome-lysosome fusion involved in apoptotic cell clearance","termid":"GO:0090389"}


id: SO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_variant","termid":"SO:0001622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"5'UTR variant","type":"exact"},{"name":"5PRIME_UTR","type":"exact"},{"name":"ANNOVAR:UTR5","type":"related"},{"name":"Jannovar:5_prime_utr_variant","type":"exact"},{"name":"Seattleseq:5-prime-UTR","type":"exact"},{"name":"VAAST:5_prime_UTR_variant","type":"exact"},{"name":"VAAST:five_prime_UTR_variant","type":"exact"},{"name":"VEP:5_prime_UTR_variant","type":"exact"},{"name":"five prime UTR variant","type":"exact"},{"name":"snpEff:UTR_5_PRIME","type":"exact"},{"name":"untranslated-5","type":"exact"}],"termid":"SO:0001623"}


id: GO:0099140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton organization","termid":"GO:0099187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton organization","termid":"GO:0099140"}


id: PBO:0088950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating enzyme Atg10","termid":"PBO:0088950"}


id: GO:0015865
data:
  {"annotated_genes":["SJAG_04328","SJAG_02050","SJAG_00760","SJAG_00612","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107417,99401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[107418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[63375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[99402,107420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[89477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"purine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015865","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0140021":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: PBO:0018147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein involved in inositol lipid-mediated signaling Sfk1 (predicted)","termid":"PBO:0018147"}


id: PBO:0085860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from nucleus to vacuole upon DNA replication stress; YLR297W has a paralog, YOR186W, that arose from the whole genome duplication","termid":"PBO:0085860"}


id: PBO:0031711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitophagy","termid":"PBO:0031711"}


id: PBO:0071912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 51","termid":"PBO:0071912"}


id: GO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate = cis -4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-2H-benzo[h]chromene-2-carboxylate isomerase activity (obsolete GO:0018837)","termid":"GO:0018837"}


id: PBO:0056718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha","termid":"PBO:0056718"}


id: GO:1903438
data:
  {"annotated_genes":["SJAG_03581","SJAG_01114","SJAG_04776","SJAG_02392","SJAG_04597","SJAG_01188","SJAG_02838","SJAG_03704","SJAG_01787","SJAG_00514","SJAG_03936","SJAG_00845","SJAG_04468","SJAG_00082","SJAG_03631","SJAG_03342","SJAG_05290","SJAG_01805","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90984,86583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[84131,107045,91151,90985,109872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[107290,100248,115852,92424,87355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[109873,90373,102912,103577,88994,85826,111981,86455,101707,114396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[90988,88995,84132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinesis","termid":"GO:1903490"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of mitotic cytokinetic process","type":"narrow"},{"name":"up regulation of mitotic cytokinetic process","type":"exact"},{"name":"up-regulation of mitotic cytokinetic process","type":"exact"},{"name":"upregulation of mitotic cytokinetic process","type":"exact"}],"termid":"GO:1903438","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PBO:0074995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-6","termid":"PBO:0074995"}


id: PATO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001174 urine composition (obsolete PATO:0001174)","termid":"PATO:0001174"}


id: FYPO:0003771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"decreased protein localization to plasma membrane during vegetative growth","termid":"FYPO:0008198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane of cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to plasma membrane of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization in plasma membrane of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane of cell end during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane of cell tip during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to plasma membrane of cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003771"}


id: PBO:0085159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; required for protein translocation into the endoplasmic reticulum (ER); homolog of Yarrowia lipolytica SLS1; GrpE-like protein","termid":"PBO:0085159"}


id: GO:0015730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of propionate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid transmembrane transport","termid":"GO:0015913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"propanoate transmembrane transport","synonyms":[{"name":"propanoate transport","type":"broad"},{"name":"propionate transport","type":"exact"}],"termid":"GO:0015730"}


id: GO:0008021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.","definition_xrefs":["PMID:10099709","PMID:12563290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle","secondary_identifiers":["Wikipedia:Synaptic_vesicle","NIF_Subcellular:sao1071221672"],"synonyms":[{"name":"docked vesicle","type":"narrow"}],"termid":"GO:0008021"}


id: GO:0043451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["Wikipedia:Alkene","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene catabolic process","synonyms":[{"name":"alkene breakdown","type":"exact"},{"name":"alkene catabolism","type":"exact"},{"name":"alkene degradation","type":"exact"}],"termid":"GO:0043451"}


id: PBO:0090094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit Rcf2","termid":"PBO:0090094"}


id: PATO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's decomposition into component parts.","definition_xrefs":["Medical-dictionary:Medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed","termid":"PATO:0001432"}


id: PBO:0086408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative glycoside hydrolase of the mitochondrial intermembrane space","termid":"PBO:0086408"}


id: GO:1903401
data:
  {"annotated_genes":["SJAG_03400","SJAG_04637","SJAG_03256","SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[100381,99349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[93932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[100382,106553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine across a membrane.","definition_xrefs":["PMID:8195186","GOC:krc","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transport","termid":"GO:1902022"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-lysine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903401","terms_by_termid":{"GO:0089707":null,"GO:0090517":null,"GO:0097639":null,"GO:1901482":null}}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: PBO:0083706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized protein of unknown function","termid":"PBO:0083706"}


id: PBO:0088727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog","termid":"PBO:0088727"}


id: GO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membranous septum morphogenesis","termid":"GO:0003149"}


id: GO:1901392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta1 activation (obsolete GO:1901392)","synonyms":[{"name":"regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGFB1 activation","type":"exact"},{"name":"regulation of TGFbeta 1 activation","type":"exact"},{"name":"regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"regulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901392"}


id: PBO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 3 subunit","termid":"PBO:0043083"}


id: PBO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_phenylalanine","termid":"PBO:0031388"}


id: PBO:0043755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 3","termid":"PBO:0043755"}


id: PBO:0013752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1","termid":"PBO:0013752"}


id: PBO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 4","termid":"PBO:0061539"}


id: FYPO:0003871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal when the cell is in G0 phase. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:mah","GO:0006325","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin organization during G0","synonyms":[{"name":"abnormal chromatin organisation during G0","type":"exact"},{"name":"abnormal chromatin organization during cell quiescence","type":"exact"},{"name":"abnormal chromatin organization during quiescence","type":"exact"}],"termid":"FYPO:0003871"}


id: PBO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C10","termid":"PBO:0045222"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: PBO:0071647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 11","termid":"PBO:0071647"}


id: PBO:0073062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1 pseudogene 4","termid":"PBO:0073062"}


id: PBO:0049432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 9","termid":"PBO:0049432"}


id: GO:0014035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate determination","termid":"GO:0048867"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate determination","termid":"GO:0014035"}


id: GO:0005801
data:
  {"annotated_genes":["SJAG_03552","SJAG_03953","SJAG_04739","SJAG_04837","SJAG_03467","SJAG_00816","SJAG_04358","SJAG_01459","SJAG_02495","SJAG_03690","SJAG_02168","SJAG_02525","SJAG_02750","SJAG_01415","SJAG_04406","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85248,89676,89926,93876,94659,96321,99073,100008,109193,111246,112934,115911],"is_not":false,"summary":null,"term":"GO:0005801"},{"annotations":[87319,92299,95669,114014],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033106"}]},"cv_name":"cellular_component","definition":"The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum.","definition_xrefs":["ISBN:0198506732","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00816":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_02168":null,"SJAG_02495":null,"SJAG_02525":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03552":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04358":null,"SJAG_04406":null,"SJAG_04739":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"cis-Golgi network","references_by_uniquename":{"GO_REF:0000107":null,"PMID:31956022":null},"secondary_identifiers":["NIF_Subcellular:sao632188024"],"synonyms":[{"name":"Golgi cis face","type":"related"},{"name":"Golgi cis-face","type":"related"},{"name":"cis Golgi network","type":"exact"},{"name":"cis face","type":"broad"},{"name":"forming face","type":"related"}],"termid":"GO:0005801","terms_by_termid":{"GO:0005801":null,"GO:0033106":null}}


id: PBO:0038714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 9","termid":"PBO:0038714"}


id: PBO:0050483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A11","termid":"PBO:0050483"}


id: PBO:0085906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; authentic, non-tagged protein is detected in purified mitochondria in high-throughput studies; potential orthologs found in other fungi","termid":"PBO:0085906"}


id: GO:0009383
data:
  {"annotated_genes":["SJAG_02417","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92191,110127],"is_not":false,"summary":null,"term":"GO:0009383"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.","definition_xrefs":["PMID:18786544","GOC:imk","PMID:10026269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02417":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"rRNA (cytosine-C5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6793057","Reactome:R-HSA-6790944"],"synonyms":[{"name":"rRNA (cytosine-C5-967)-methyltransferase activity","type":"narrow"},{"name":"rRNA m5C967 methyltransferase activity","type":"narrow"}],"termid":"GO:0009383","terms_by_termid":{"GO:0009383":null}}


id: GO:0097555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the right anterior basal body, extends laterally through the cytoplasm, crosses the left anterior axoneme, and exits as a membrane-bound flagellum on the anterior right side of the cell.","definition_xrefs":["PMID:5961344","ISBN:9780124260207","GOC:giardia","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right anterior flagellum","synonyms":[{"name":"right anterior cilium","type":"exact"}],"termid":"GO:0097555"}


id: PBO:0113050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; involved in the nuclear import of Hsp82p after DNA damage; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0113050"}


id: PBO:0056914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC-induced long non-coding RNA","termid":"PBO:0056914"}


id: PBO:0058505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5695","termid":"PBO:0058505"}


id: PBO:0053254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 6","termid":"PBO:0053254"}


id: GO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll protein, a transmembrane receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Toll binding","synonyms":[{"name":"Tl binding","type":"exact"},{"name":"Toll ligand","type":"narrow"},{"name":"Toll receptor binding","type":"exact"}],"termid":"GO:0005121"}


id: PBO:0078057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 47","termid":"PBO:0078057"}


id: GO:0097559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right ventral flagellum","synonyms":[{"name":"right ventral cilium","type":"exact"}],"termid":"GO:0097559"}


id: PBO:0041916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 4 precursor","termid":"PBO:0041916"}


id: PBO:0071104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 106","termid":"PBO:0071104"}


id: PBO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group B","termid":"PBO:0047275"}


id: GO:0030050
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69355,112695],"is_not":false,"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Movement of a vesicle along an actin filament, mediated by motor proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle transport along actin filament","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030050","terms_by_termid":{"GO:0030050":null}}


id: PBO:0089579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3128 family, human c22orf39 ortholog","termid":"PBO:0089579"}


id: GO:0000727
data:
  {"annotated_genes":["SJAG_04995","SJAG_00857","SJAG_02348","SJAG_01624","SJAG_04210","SJAG_01762","SJAG_00884","SJAG_01044","SJAG_05180","SJAG_00696","SJAG_01354","SJAG_00327","SJAG_03160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87028,88533,95848,95988,102952,103777,106748,108425,108554,109993,111618,111788,113609],"is_not":false,"summary":null,"term":"GO:0000727"}]},"cv_name":"biological_process","definition":"The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_01044":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_03160":null,"SJAG_04210":null,"SJAG_04995":null,"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006310","GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via break-induced replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000727","terms_by_termid":{"GO:0000727":null}}


id: FYPO:0006118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 5-fluoroorotic acid (5-FOA). Cells stop growing (and may die) at a concentration of 5-FOA that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 5-fluoroorotic acid","synonyms":[{"name":"hypersensitive to 5-fluoroorotic acid","type":"exact"},{"name":"sensitive to 5-FOA","type":"exact"},{"name":"sensitive to 5-fluoroorotic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to 5-fluoroorotic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0006118"}


id: PBO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 2","termid":"PBO:0070330"}


id: PBO:0076707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7 like 1","termid":"PBO:0076707"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3NADPH + 5H+ = H2Se + 3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"selenite reductase activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"termid":"GO:0098623"}


id: GO:0032802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a low-density lipoprotein particle receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"low-density lipoprotein receptor particle metabolic process","termid":"GO:0032799"},{"relation_name":"is_a","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"LDL receptor breakdown","type":"exact"},{"name":"LDL receptor catabolic process","type":"exact"},{"name":"LDL receptor catabolism","type":"related"},{"name":"LDL receptor degradation","type":"exact"},{"name":"low-density lipoprotein receptor breakdown","type":"exact"},{"name":"low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"low-density lipoprotein receptor catabolism","type":"exact"},{"name":"low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032802"}


id: PBO:0004172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease Swi10","termid":"PBO:0004172"}


id: PBO:0058389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4761","termid":"PBO:0058389"}


id: PBO:0070874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 5","termid":"PBO:0070874"}


id: PR:O59759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1020.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.05","synonyms":[{"name":"Spom972h-SPCC1020.05","type":"exact"}],"termid":"PR:O59759"}


id: PBO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_file_curator","termid":"PBO:0110121"}


id: PBO:0017454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interacts_with","termid":"PBO:0017454"}


id: GO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-2 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-2 production","termid":"GO:0032663"},{"relation_name":"positively_regulates","term_name":"interleukin-2 production","termid":"GO:0032623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-2 production","secondary_identifiers":["GO:0045086","GO:1900042"],"synonyms":[{"name":"activation of interleukin-2 production","type":"narrow"},{"name":"positive regulation of IL-2 production","type":"exact"},{"name":"positive regulation of interleukin-2 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-2 secretion","type":"narrow"},{"name":"stimulation of interleukin-2 production","type":"narrow"},{"name":"up regulation of interleukin-2 production","type":"exact"},{"name":"up-regulation of interleukin-2 production","type":"exact"},{"name":"upregulation of interleukin-2 production","type":"exact"}],"termid":"GO:0032743"}


id: PBO:0009107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I core factor complex subunit Rrn7","termid":"PBO:0009107"}


id: PBO:0059192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member G","termid":"PBO:0059192"}


id: PBO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC vitamin D binding protein","termid":"PBO:0048448"}


id: GO:0046943
data:
  {"annotated_genes":["SJAG_00232","SJAG_03503","SJAG_02140","SJAG_01872","SJAG_00543","SJAG_04637","SJAG_05175","SJAG_03400","SJAG_03644","SJAG_05325","SJAG_02779","SJAG_04905","SJAG_00671","SJAG_00275","SJAG_03256","SJAG_02780","SJAG_04706","SJAG_00276","SJAG_01505","SJAG_01406","SJAG_04593","SJAG_04718","SJAG_01960","SJAG_02029","SJAG_04725","SJAG_01924","SJAG_04588","SJAG_00626","SJAG_04295","SJAG_04984","SJAG_03899","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70443,79233,79297,84058],"is_not":false,"summary":null,"term":"GO:0046943"},{"annotations":[95271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[93133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[71212,88636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[88354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[115510,110203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[71210,88637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[104095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[89068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[94799,96796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[85004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[92595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[93933,96916,100385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[106554,99350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[93134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[100386,93135,94800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[93934,100387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[106555,99351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[99352,93935,100388,106556,96917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[104437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[97767,96909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[100389,87205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[100390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[114955,98210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[98211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[98212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[85005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[104815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[108779,89912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[90968,110673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[98213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[98214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[108785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carboxylic acids from one side of a membrane to the other. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"carboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-390347"],"termid":"GO:0046943","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:1901239":null,"GO:1901604":null}}


id: GO:0141104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances a G protein-coupled receptor signal transduction pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25332123","PMID:15963708","PMID:18978047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","termid":"GO:0075118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host G protein-coupled receptor signal transduction","termid":"GO:0141104"}


id: PBO:0072837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein","termid":"PBO:0072837"}


id: PR:Q09805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00316","PANTHER:PTHR11679:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: FYPO:0006314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which formation of the ascus, the sac-like structure that encloses spores, does not occur.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascus development","termid":"FYPO:0000680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000680"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000680"],"is_obsolete":false,"name":"abolished ascus formation","synonyms":[{"name":"abolished asci formation","type":"exact"},{"name":"abolished ascus development","type":"related"}],"termid":"FYPO:0006314"}


id: PBO:0049334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 2","termid":"PBO:0049334"}


id: GO:1900531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to heat.","definition_xrefs":["GOC:al","PMID:9135147","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to heat (obsolete GO:1900531)","synonyms":[{"name":"regulation of cell shape involved in cellular response to heat","type":"exact"},{"name":"regulation of cell shape of cellular response to heat","type":"exact"},{"name":"regulation of cell shape of cellular response to heat stress","type":"exact"}],"termid":"GO:1900531"}


id: PBO:0038965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity dependent neuroprotector homeobox","termid":"PBO:0038965"}


id: _global:causal_relation_between_processes
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_processes","secondary_identifiers":["RO:0002501"],"termid":"_global:causal_relation_between_processes"}


id: PBO:0048996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC5 antisense RNA 2","termid":"PBO:0048996"}


id: GO:0009712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound metabolic process","synonyms":[{"name":"catechol metabolic process","type":"related"},{"name":"catechol metabolism","type":"related"}],"termid":"GO:0009712"}


id: GO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of xanthophore differentiation","termid":"GO:0050938"}


id: GO:0004798
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114530],"is_not":false,"summary":null,"term":"GO:0004798"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.","definition_xrefs":["EC:2.7.4.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"thymidylate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DTMPKI-RXN","RHEA:13517"],"synonyms":[{"name":"ATP:dTMP phosphotransferase activity","type":"related"},{"name":"TMPK activity","type":"related"},{"name":"dTMP kinase activity","type":"exact"},{"name":"deoxythymidine 5'-monophosphate kinase activity","type":"related"},{"name":"thymidine 5'-monophosphate kinase activity","type":"related"},{"name":"thymidine monophosphate kinase activity","type":"related"},{"name":"thymidylate monophosphate kinase activity","type":"related"},{"name":"thymidylic acid kinase activity","type":"related"},{"name":"thymidylic kinase activity","type":"related"}],"termid":"GO:0004798","terms_by_termid":{"GO:0004798":null}}


id: PBO:0088916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ lysophospholipase fusion protein Dfr1","termid":"PBO:0088916"}


id: PBO:0081207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 7 pseudogene 1","termid":"PBO:0081207"}


id: GO:0060721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spongiotrophoblast cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"},{"relation_name":"regulates","term_name":"spongiotrophoblast cell proliferation","termid":"GO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spongiotrophoblast cell proliferation","termid":"GO:0060721"}


id: PBO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3L2 pseudogene 1","termid":"PBO:0039015"}


id: PBO:0086846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxine 4-dehydrogenase; differentially expressed during alcoholic fermentation; expression activated by transcription factor YRM1/YOR172W; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086846"}


id: PBO:0090510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf11","termid":"PBO:0090510"}


id: PBO:0054819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2232","termid":"PBO:0054819"}


id: PBO:0070179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 94 pseudogene","termid":"PBO:0070179"}


id: PBO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family","termid":"PBO:0001319"}


id: GO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + O2 = H2O2 + H+ + oxalate.","definition_xrefs":["RHEA:14837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glyoxylate oxidase activity","secondary_identifiers":["EC:1.2.3.5","MetaCyc:GLYOXYLATE-OXIDASE-RXN","KEGG_REACTION:R00466","Reactome:R-HSA-389862"],"synonyms":[{"name":"glyoxylate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047969"}


id: GO:0007278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a pole cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"pole cell development","termid":"GO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pole cell fate determination","termid":"GO:0007278"}


id: PBO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0015663"}


id: FYPO:0006528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased during the meiotic cell cycle. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased proteolysis during meiotic cell cycle","synonyms":[{"name":"decreased peptidolysis during meiotic cell cycle","type":"exact"},{"name":"decreased protein cleavage during meiotic cell cycle","type":"related"},{"name":"reduced proteolysis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006528"}


id: PR:O13730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A muskelin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15526:SF5","PRO:DNx","OMA:SCHPO01545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.10","secondary_identifiers":["UniProtKB:O13730"],"synonyms":[{"name":"Spom972h-MKLN1","type":"exact"}],"termid":"PR:O13730"}


id: PBO:0003470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic valine-tRNA ligase Vrs1/Vas1","termid":"PBO:0003470"}


id: GO:0034009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate = diphosphate + isoprene.","definition_xrefs":["RHEA:13369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isoprene synthase activity","secondary_identifiers":["KEGG_REACTION:R08199","MetaCyc:4.2.3.27-RXN","EC:4.2.3.27"],"synonyms":[{"name":"ISPC","type":"related"},{"name":"ISPS","type":"related"},{"name":"dimethylallyl-diphosphate diphosphate-lyase (isoprene-forming) activity","type":"related"}],"termid":"GO:0034009"}


id: PBO:0064168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVE","termid":"PBO:0064168"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in pericardium morphogenesis (obsolete GO:2000166)","termid":"GO:2000166"}


id: PATO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape like a ring (a circular shape enclosing a space).","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring shaped","termid":"PATO:0002539"}


id: PR:G2TRU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.20","synonyms":[{"name":"Spom972h-SPCC18.20","type":"exact"}],"termid":"PR:G2TRU1"}


id: PBO:0053971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1282","termid":"PBO:0053971"}


id: PBO:0088176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of an ESCRT-III like complex; null mutant has growth defect at 37 C in an apq12 deletion background; non-essential gene","termid":"PBO:0088176"}


id: PBO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNB antisense RNA 1","termid":"PBO:0047679"}


id: PBO:0078944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 2-1","termid":"PBO:0078944"}


id: PBO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8 (predicted)","termid":"PBO:0000795"}


id: GO:0031325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular metabolic process (obsolete GO:0031325)","synonyms":[{"name":"activation of cellular metabolic process","type":"narrow"},{"name":"positive regulation of cellular metabolism","type":"exact"},{"name":"stimulation of cellular metabolic process","type":"narrow"},{"name":"up regulation of cellular metabolic process","type":"exact"},{"name":"up-regulation of cellular metabolic process","type":"exact"},{"name":"upregulation of cellular metabolic process","type":"exact"}],"termid":"GO:0031325"}


id: PBO:0063470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit beta","termid":"PBO:0063470"}


id: PBO:0062377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily C member 1","termid":"PBO:0062377"}


id: PBO:0090422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 regulatory subunit beta isoform 2, Ckb2","termid":"PBO:0090422"}


id: GO:0045209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Leptomycin B-sensitive movement of a MAPK phosphatase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase export from nucleus, leptomycin B sensitive (obsolete GO:0045209)","synonyms":[{"name":"MAPK phosphatase export from cell nucleus, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase export out of nucleus, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase transport from nucleus to cytoplasm, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase-nucleus export, leptomycin B sensitive","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase export out of nucleus","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase transport from nucleus to cytoplasm","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase-nucleus export","type":"exact"}],"termid":"GO:0045209"}


id: GO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine acetylation","termid":"GO:0030920"}


id: MOD:01763
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01763"}


id: PBO:0029116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_phase","termid":"PBO:0029116"}


id: FYPO:0003360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which superoxide dismutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000298","FYPO:0000654","FYPO:0000002","FYPO:0000652","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"abolished superoxide dismutase activity","synonyms":[{"name":"superoxide dismutase activity abolished","type":"exact"}],"termid":"FYPO:0003360"}


id: PBO:0038477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 17, pseudogene","termid":"PBO:0038477"}


id: FYPO:0006823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, but elongates at a slower rate than normal and divides with an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"slow vegetative cell growth","termid":"FYPO:0006821"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"},{"relation_name":"is_a","term_name":"slow vegetative cell growth","termid":"FYPO:0006821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable small vegetative cell with slow cell growth","synonyms":[{"name":"mitosis with small cell size and slow cell growth","type":"related"},{"name":"reduced size at cell division with slow cell growth","type":"related"},{"name":"small viable vegetative cell with slow cell growth","type":"exact"},{"name":"viable small cell with slow cell growth during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with slow cell growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006823"}


id: PR:O42913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nrm1 gene.","definition_xrefs":["UniProtKB:O42913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor nrm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.07c","synonyms":[{"name":"Spom972h-nrm1","type":"exact"},{"name":"negative regulator of MBF targets 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42913"}


id: PBO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 5","termid":"PBO:0045066"}


id: PBO:0061856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 1","termid":"PBO:0061856"}


id: PBO:0042353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD93 molecule","termid":"PBO:0042353"}


id: GO:0009941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast envelope","termid":"GO:0009941"}


id: GO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of phospholipase D.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase inhibitor activity","termid":"GO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"phospholipase D inhibitor activity","termid":"GO:0060961"}


id: PBO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein serine/threonine kinase alpha subunit Ssp2","termid":"PBO:0018196"}


id: FYPO:0002636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000337","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"delayed onset of mitotic spindle elongation","synonyms":[{"name":"delayed mitotic spindle elongation","type":"exact"},{"name":"delayed onset of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"delayed onset of spindle elongation during mitotic cell cycle","type":"related"},{"name":"mitotic spindle elongation delayed","type":"exact"}],"termid":"FYPO:0002636"}


id: PBO:0109084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGL4 pseudogene 1","termid":"PBO:0109084"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: PBO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb4 (predicted)","termid":"PBO:0000557"}


id: PBO:0086651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole and is induced in response to the DNA-damaging agent MMS; gene expression increases in response to Zymoliase treatment","termid":"PBO:0086651"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:jl","GOC:bc","ISBN:0198506732","PMID:22683681","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: PBO:0078756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 61B","termid":"PBO:0078756"}


id: PBO:0076698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1L antisense RNA 1","termid":"PBO:0076698"}


id: GO:1900958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900956"},{"relation_name":"is_a","term_name":"positive regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900961"},{"relation_name":"positively_regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900958"}


id: FYECO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where glycerol is the main carbon source, but the medium also contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol MM with trace glucose","synonyms":[{"name":"glycerol main carbon source + very low glucose MM","type":"exact"},{"name":"glycerol minimal medium with trace glucose","type":"exact"}],"termid":"FYECO:0000072"}


id: PR:Q9USZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein E that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11193:SF0","PRO:DNx","OMA:SCHPO02989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.06c","secondary_identifiers":["UniProtKB:Q9USZ3"],"synonyms":[{"name":"Sm protein E (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-E (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPE","type":"exact"},{"name":"snRNP-E (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ3"}


id: FYPO:0001530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTPase activity","termid":"FYPO:0001530"}


id: GO:0045239
data:
  {"annotated_genes":["SJAG_03813","SJAG_02464","SJAG_01524","SJAG_03290","SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106655,108591,84021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[111480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042709"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"Any of the heteromeric enzymes that act in the TCA cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tricarboxylic acid cycle heteromeric enzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TCA cycle enzyme complex","type":"exact"}],"termid":"GO:0045239","terms_by_termid":{"GO:0009361":null,"GO:0042709":null,"GO:0045252":null}}


id: PBO:0108942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 21","termid":"PBO:0108942"}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: PBO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog","termid":"PBO:0070430"}


id: PBO:0029988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation","termid":"PBO:0029988"}


id: PBO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1 (predicted)","termid":"PBO:0001821"}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: GO:0008648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A family of hormones that stimulate secretion of saliva and cause smooth muscle contraction and vasodilation.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete tachykinin (obsolete GO:0008648)","synonyms":[{"name":"tachykinin","type":"exact"}],"termid":"GO:0008648"}


id: GO:1902888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an astral microtubule.","definition_xrefs":["PMID:16054030","GOC:TermGenie","GO_REF:0000087","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to astral microtubule","synonyms":[{"name":"protein localisation in astral microtubule","type":"exact"},{"name":"protein localisation to astral microtubule","type":"exact"},{"name":"protein localization in astral microtubule","type":"exact"}],"termid":"GO:1902888"}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: PBO:0048218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 2","termid":"PBO:0048218"}


id: PBO:0079217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 2","termid":"PBO:0079217"}


id: PBO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, TTC27 family","termid":"PBO:0002731"}


id: GO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a proplastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"proplastid stroma","termid":"GO:0009571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proplastid nucleoid","termid":"GO:0042647"}


id: PBO:0029996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies_during_glucose_starvation","termid":"PBO:0029996"}


id: PBO:0059398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31","termid":"PBO:0059398"}


id: FYPO:0001749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to tacrolimus","termid":"FYPO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tacrolimus during salt stress","synonyms":[{"name":"hypersensitive to tacrolimus during salt stress","type":"exact"},{"name":"sensitive to FK506 during salt stress","type":"exact"},{"name":"sensitive to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001749"}


id: FYPO:0006984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript synthesized on a DNA template by RNA polymerase III is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcriptional readthrough","termid":"FYPO:0003049"},{"relation_name":"output_of","term_name":"abnormal termination of RNA polymerase III transcription","termid":"FYPO:0006983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0003048","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"increased transcriptional readthrough at RNA polymerase III-transcribed genes","synonyms":[{"name":"3'-extended transcript at RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length by 3' extension of RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length due to transcriptional readthrough at RNA polymerase III-transcribed genes","type":"exact"},{"name":"poly(A) readthrough at RNA polymerase III-transcribed genes","type":"related"}],"termid":"FYPO:0006984"}


id: FYPO:0000238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell fails to resume growth after several days in G0 phase. The inviable cells show some features characteristic of apoptosis, including loss of DNA.","definition_xrefs":["PomBase:mah","PMID:19197239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable cell upon G0 to G1 transition","synonyms":[{"name":"abolished mitotic competence upon G0 to G1 transition","type":"related"},{"name":"die in G0 with an apoptotic-like phenotype","type":"related"},{"name":"inviable cell upon exit from cell quiescence","type":"exact"},{"name":"inviable cell upon exit from quiescence","type":"exact"},{"name":"lethal in cell upon G0 to G1 transition","type":"exact"}],"termid":"FYPO:0000238"}


id: GO:0014803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the longitudinal sarcoplasmic reticulum envelope. The longitudinal sarcoplasmic reticulum lumen is continuous with the lumen contained within the terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum lumen","termid":"GO:0014803"}


id: GO:0032261
data:
  {"annotated_genes":["SJAG_01859","SJAG_03298","SJAG_06634","SJAG_01070","SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90107,113351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[90323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[98366,90325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[85605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[90327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null,"SJAG_03298":null,"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032261","terms_by_termid":{"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044209":null}}


id: PBO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.3","termid":"PBO:0005340"}


id: PR:Q9HDV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-specific demethylase 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component lid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.06","secondary_identifiers":["UniProtKB:Q9HDV4"],"synonyms":[{"name":"Lid2C component lid2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP19A11.06","type":"related"},{"name":"Spom972h-KDM5A","type":"exact"}],"termid":"PR:Q9HDV4"}


id: FYPO:0003852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing FR901464.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on FR901464","synonyms":[{"name":"normal cell population growth in presence of FR901464","type":"exact"},{"name":"normal cell population growth on FR901464","type":"exact"},{"name":"normal cellular response to FR901464","type":"related"},{"name":"normal vegetative cell population growth on FR901464","type":"exact"}],"termid":"FYPO:0003852"}


id: GO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-3'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0323"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via the 3'-end to peptidyl-tyrosine (obsolete GO:0045326)","synonyms":[{"name":"DNA-protein covalent cross-linking via the 3'-end to peptidyl-tyrosine","type":"exact"}],"termid":"GO:0045326"}


id: PBO:0110355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 2","termid":"PBO:0110355"}


id: GO:0010732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein glutathionylation","synonyms":[{"name":"regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010732"}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: PBO:0077862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 3","termid":"PBO:0077862"}


id: PR:P56289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P56289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.10c","synonyms":[{"name":"Spom972h-tif51","type":"exact"},{"name":"eIF-5A-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56289"}


id: GO:0047595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4,5,6-tetrahydro-6-oxonicotinate + oxidized ferredoxin = 6-hydroxynicotinate + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.1","MetaCyc:6-HYDROXYNICOTINATE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"6-hydroxynicotinate reductase activity","secondary_identifiers":["RHEA:17225"],"synonyms":[{"name":"1,4,5,6-tetrahydro-6-oxonicotinate:ferredoxin oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic reductase activity","type":"related"},{"name":"6-oxo-1,4,5,6-tetrahydronicotinate:ferredoxin oxidoreductase activity","type":"related"},{"name":"6-oxotetrahydro-nicotinate dehydrogenase activity","type":"related"},{"name":"6-oxotetrahydronicotinate dehydrogenase activity","type":"related"},{"name":"HNA reductase activity","type":"related"}],"termid":"GO:0047595"}


id: GO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminopentanamide + H2O = 5-aminopentanoate + NH3.","definition_xrefs":["EC:3.5.1.30","MetaCyc:5-AMINOPENTANAMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-aminopentanamidase activity","secondary_identifiers":["RHEA:15677"],"synonyms":[{"name":"5-aminonorvaleramidase activity","type":"related"},{"name":"5-aminopentanamide amidohydrolase activity","type":"related"},{"name":"5-aminovaleramidase activity","type":"related"}],"termid":"GO:0047588"}


id: PBO:0056963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23a","termid":"PBO:0056963"}


id: GO:2001217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001217)","synonyms":[{"name":"regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001217"}


id: FYPO:0005669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to hydroxyurea. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to hydroxyurea (obsolete FYPO:0005669)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to HU","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to hydroxyurea","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to hydroxyurea","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005669"}


id: PATO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001060 absolute efficiency (obsolete PATO:0001060)","termid":"PATO:0001060"}


id: PBO:0087847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase II; relieves torsional strain in DNA by cleaving and re-sealing phosphodiester backbone of both positively and negatively supercoiled DNA; cleaves complementary strands; localizes to axial cores in meiosis; required for replication slow zone (RSZ) breakage following Mec1p inactivation; human homolog TOP2A implicated in cancers, and can complement yeast null mutant","termid":"PBO:0087847"}


id: PBO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 29","termid":"PBO:0061369"}


id: PBO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 1","termid":"PBO:0044590"}


id: PBO:0061505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurturin","termid":"PBO:0061505"}


id: GO:0009962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flavonoid biosynthetic process","synonyms":[{"name":"regulation of flavonoid anabolism","type":"exact"},{"name":"regulation of flavonoid biosynthesis","type":"exact"},{"name":"regulation of flavonoid formation","type":"exact"},{"name":"regulation of flavonoid synthesis","type":"exact"}],"termid":"GO:0009962"}


id: GO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate.","definition_xrefs":["EC:6.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"RNA-3'-phosphate cyclase activity","secondary_identifiers":["MetaCyc:RNA-3-PHOSPHATE-CYCLASE-RXN","RHEA:23976"],"synonyms":[{"name":"RNA 3'-terminal phosphate cyclase activity","type":"related"},{"name":"RNA cyclase activity","type":"related"},{"name":"RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)","type":"related"}],"termid":"GO:0003963"}


id: PBO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4B","termid":"PBO:0061882"}


id: PBO:0052859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-2","termid":"PBO:0052859"}


id: GO:0043225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + inorganic anion(out) = ADP + phosphate + inorganic anion(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled inorganic anion transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5690340","Reactome:R-HSA-1454916"],"synonyms":[{"name":"ATP-dependent anion transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled anion transmembrane transporter activity","type":"exact"},{"name":"anion ABC transporter","type":"narrow"},{"name":"anion transmembrane-transporting ATPase activity","type":"related"},{"name":"anion-transporting ATPase activity","type":"exact"}],"termid":"GO:0043225"}


id: GO:1900800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cspyrone B1.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cspyrone B1 metabolic process","synonyms":[{"name":"cspyrone B1 metabolism","type":"exact"}],"termid":"GO:1900800"}


id: PBO:0074755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 114","termid":"PBO:0074755"}


id: GO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining subsequent sites of bud emergence such that budding takes place at alternating poles of a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049","GO:0007163"],"is_obsolete":false,"name":"bipolar cellular bud site selection","synonyms":[{"name":"bipolar bud site selection","type":"exact"},{"name":"bipolar budding","type":"broad"},{"name":"polar budding","type":"broad"}],"termid":"GO:0007121"}


id: PBO:0066948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 250","termid":"PBO:0066948"}


id: SO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA_gene","synonyms":[{"name":"ncRNA gene","type":"exact"},{"name":"non-coding RNA gene","type":"exact"}],"termid":"SO:0001263"}


id: MOD:01727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"derives_from","term_name":"cysTMT6plex-zero reporter+balance reagent cysteine disulfide","termid":"MOD:01822"},{"relation_name":"derives_from","term_name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","termid":"MOD:01823"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-126 reporter fragment","type":"exact"}],"termid":"MOD:01727"}


id: PBO:0064456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-glucosyltransferase 2","termid":"PBO:0064456"}


id: GO:0033536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"ajugose metabolic process","termid":"GO:0033535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ajugose biosynthetic process","synonyms":[{"name":"ajugose anabolism","type":"exact"},{"name":"ajugose biosynthesis","type":"exact"},{"name":"ajugose formation","type":"exact"},{"name":"ajugose synthesis","type":"exact"}],"termid":"GO:0033536"}


id: PBO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CRE element","termid":"PBO:0001037"}


id: PBO:0046268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 7","termid":"PBO:0046268"}


id: PR:P05752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps601 gene.","definition_xrefs":["UniProtKB:P05752","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.07c","synonyms":[{"name":"Spom972h-rps601","type":"exact"}],"termid":"PR:P05752"}


id: PBO:0028738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hercynylcysteine_sulfoxide_absent_from_cell","termid":"PBO:0028738"}


id: GO:0102171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,6E)-nerolidol + O2 + reduced [NADPH--hemoprotein reductase] = (3E)-4,8-dimethylnona-1,3,7-triene + but-3-en-2-one + H+ + 2 H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:55424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"DMNT synthase activity","secondary_identifiers":["MetaCyc:RXN-11911","EC:1.14.14.59"],"termid":"GO:0102171"}


id: GO:0007199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase (GC) activity and a subsequent increase in the concentration of cyclic GMP (cGMP).","definition_xrefs":["GOC:signaling","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","termid":"GO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger","synonyms":[{"name":"G protein signaling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via activation of guanylate cyclase activity","type":"exact"},{"name":"GPCR signaling pathway via cGMP second messenger","type":"exact"},{"name":"guanylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0007199"}


id: PBO:0085168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated plasma membrane protein; acts as a sensor for cell wall integrity signaling and activates the pathway; interacts with Rom2p, a guanine nucleotide exchange factor for Rho1p, and with cell integrity pathway protein Zeo1p; MID2 has a paralog, MTL1, that arose from the whole genome duplication","termid":"PBO:0085168"}


id: PBO:0082813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved E2-like conjugating enzyme; mediates formation of the Atg12p-Atg5p conjugate, which is a critical step in autophagy","termid":"PBO:0082813"}


id: GO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables passage of a chloride ion through a transmembrane channel that opens when ATP is bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:9922375","PMID:24727426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellularly ATP-gated chloride channel activity","secondary_identifiers":["TC:3.A.1.202.1","GO:0005224","MetaCyc:3.6.3.49-RXN","Wikipedia:Cystic_fibrosis_transmembrane_conductance_regulator","EC:5.6.1.6"],"synonyms":[{"name":"CFTR","type":"exact"},{"name":"channel-conductance-controlling ATPase activity","type":"related"},{"name":"cystic fibrosis transmembrane conductance regulator","type":"narrow"}],"termid":"GO:0005260"}


id: PBO:0066364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 5","termid":"PBO:0066364"}


id: PBO:0082986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic and mitochondrial glutathione oxidoreductase; converts oxidized glutathione to reduced glutathione; cytosolic Glr1p is the main determinant of the glutathione redox state of the mitochondrial intermembrane space; mitochondrial Glr1p has a role in resistance to hyperoxia; protein abundance increases in response to DNA replication stress","termid":"PBO:0082986"}


id: GO:0008319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete prenyl protein specific endopeptidase activity (obsolete GO:0008319)","synonyms":[{"name":"prenyl protein specific endopeptidase activity","type":"exact"}],"termid":"GO:0008319"}


id: SO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Termination signal preferentially observed downstream of polyadenylation signal","definition_xrefs":["PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_terminator","termid":"SO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_termination_signal","synonyms":[{"name":"(A(U)GUA) motif","type":"exact"},{"name":"Nrd1 binding motif","type":"exact"},{"name":"Nrd1-dependent terminator","type":"exact"},{"name":"UCUUG motif","type":"exact"},{"name":"UGUAA/G motif","type":"exact"},{"name":"polyA site associated transcription termination signal","type":"exact"},{"name":"polyA site downstream element","type":"exact"},{"name":"transcription termination signal","type":"exact"}],"termid":"SO:0002213"}


id: GO:1900428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth","termid":"GO:0010570"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"}


id: PBO:0024480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein","termid":"PBO:0024480"}


id: PBO:0091398
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.2588066_2588067insA","termid":"PBO:0091398"}


id: GO:1901331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"is_a","term_name":"positive regulation of neuroepithelial cell differentiation","termid":"GO:1902913"},{"relation_name":"positively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of odontoblast differentiation","synonyms":[{"name":"activation of odontoblast differentiation","type":"narrow"},{"name":"up regulation of odontoblast differentiation","type":"exact"},{"name":"up-regulation of odontoblast differentiation","type":"exact"},{"name":"upregulation of odontoblast differentiation","type":"exact"}],"termid":"GO:1901331"}


id: GO:0031438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA cleavage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA cleavage (obsolete GO:0031438)","synonyms":[{"name":"down regulation of mRNA cleavage","type":"exact"},{"name":"down-regulation of mRNA cleavage","type":"exact"},{"name":"downregulation of mRNA cleavage","type":"exact"},{"name":"inhibition of mRNA cleavage","type":"narrow"}],"termid":"GO:0031438"}


id: PBO:0079325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13C","termid":"PBO:0079325"}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: PBO:0046547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 1","termid":"PBO:0046547"}


id: PBO:0088961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, PTPA family Ypa1","termid":"PBO:0088961"}


id: PBO:0087562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Snt2C complex, RING finger ubiquitin ligase (E3); physically associates with Ecm5p and Rpd3p; along with Ecm5p, recruits Rpd3p to small number of promoters; colocalizes with Ecm5p, independently of Rpd3p, to promoters of stress response genes upon oxidative stress; involved in ubiquitination, degradation of excess histones; interacts with Ubc4p; role in regulating genes encoding amine transporters; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087562"}


id: GO:0044390
data:
  {"annotated_genes":["SJAG_00435","SJAG_01533","SJAG_00033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73612,76792,73561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031624"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin-like protein conjugating enzyme such as ubiquitin conjugating enzyme.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00435":null,"SJAG_01533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ubiquitin-like protein conjugating enzyme binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"E2 protein ligase binding","type":"exact"},{"name":"small protein conjugating enzyme binding","type":"exact"}],"termid":"GO:0044390","terms_by_termid":{"GO:0031624":null}}


id: PBO:0090856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobase transmembrane transporter","termid":"PBO:0090856"}


id: SO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core RNA polymerase II promoter element with consensus (G/A)T(T/G/A)(T/A)(G/T)(T/G)(T/G).","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREd_motif","synonyms":[{"name":"BREd","type":"exact"},{"name":"BREd motif","type":"related"}],"termid":"SO:0001663"}


id: GO:2000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric podocyte development","synonyms":[{"name":"regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000477"}


id: PBO:0071808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 3","termid":"PBO:0071808"}


id: PBO:0027757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_calcium_ion","termid":"PBO:0027757"}


id: PBO:0069425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 689, pseudogene","termid":"PBO:0069425"}


id: PBO:0026813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_early_meiotic_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0026813"}


id: PBO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline","termid":"PBO:0000312"}


id: PBO:0063890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P pseudogene 3","termid":"PBO:0063890"}


id: PBO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing defective protein Sde2","termid":"PBO:0001846"}


id: SO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that is never translated into a protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_primary_transcript","synonyms":[{"name":"nc primary transcript","type":"exact"},{"name":"noncoding primary transcript","type":"exact"}],"termid":"SO:0000483"}


id: GO:1990923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.","definition_xrefs":["PMID:26669262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PET complex","termid":"GO:1990923"}


id: PBO:0030519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_carbendazim","termid":"PBO:0030519"}


id: GO:0045234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoleyl group to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein palmitoleylation","secondary_identifiers":["GO:0045235"],"synonyms":[{"name":"protein amino acid palmitoleylation","type":"exact"}],"termid":"GO:0045234"}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: PBO:0039407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10 pseudogene 1","termid":"PBO:0039407"}


id: PBO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein (predicted)","termid":"PBO:0004037"}


id: GO:0055117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}


id: MOD:00208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphoadenosine through a phosphodiester bond to form O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["DeltaMass:0","Unimod:405#Y","PubMed:5543675","RESID:AA0203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[4-(5'-adenosine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-adenylic-O-tyrosine","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"MOD_RES O-AMP-tyrosine","type":"exact"},{"name":"O-5'-Adenosylation ( of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-adenosine phosphodiester","type":"exact"},{"name":"OAMPTyr","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"hydrogen 5'-adenylate tyrosine ester","type":"exact"}],"termid":"MOD:00208"}


id: PBO:0050871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP(+)) 2","termid":"PBO:0050871"}


id: GO:1903696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a horsetail-astral microtubule array.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:11907273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cortical microtubule cytoskeleton","termid":"GO:0072699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to horsetail-astral microtubule array","synonyms":[{"name":"protein localisation in horsetail-astral microtubule array","type":"exact"},{"name":"protein localisation to horsetail-astral microtubule array","type":"exact"},{"name":"protein localization in horsetail-astral microtubule array","type":"exact"}],"termid":"GO:1903696"}


id: GO:1903955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["PMID:24270810","GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to mitochondrion","termid":"GO:1903214"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization to mitochondrion","termid":"GO:1903749"},{"relation_name":"positively_regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein targeting to mitochondrion","synonyms":[{"name":"activation of mitochondrial protein import","type":"related"},{"name":"activation of mitochondrial translocation","type":"related"},{"name":"activation of protein import into mitochondrion","type":"narrow"},{"name":"activation of protein targeting to mitochondria","type":"narrow"},{"name":"activation of protein targeting to mitochondrion","type":"narrow"},{"name":"activation of protein-mitochondrial targeting","type":"narrow"},{"name":"positive regulation of mitochondrial protein import","type":"related"},{"name":"positive regulation of mitochondrial translocation","type":"related"},{"name":"positive regulation of protein import into mitochondrion","type":"exact"},{"name":"positive regulation of protein targeting to mitochondria","type":"exact"},{"name":"positive regulation of protein-mitochondrial targeting","type":"exact"},{"name":"up regulation of mitochondrial protein import","type":"related"},{"name":"up regulation of mitochondrial translocation","type":"related"},{"name":"up regulation of protein import into mitochondrion","type":"exact"},{"name":"up regulation of protein targeting to mitochondria","type":"exact"},{"name":"up regulation of protein targeting to mitochondrion","type":"exact"},{"name":"up regulation of protein-mitochondrial targeting","type":"exact"},{"name":"up-regulation of mitochondrial protein import","type":"related"},{"name":"up-regulation of mitochondrial translocation","type":"related"},{"name":"up-regulation of protein import into mitochondrion","type":"exact"},{"name":"up-regulation of protein targeting to mitochondria","type":"exact"},{"name":"up-regulation of protein targeting to mitochondrion","type":"exact"},{"name":"up-regulation of protein-mitochondrial targeting","type":"exact"},{"name":"upregulation of mitochondrial protein import","type":"related"},{"name":"upregulation of mitochondrial translocation","type":"related"},{"name":"upregulation of protein import into mitochondrion","type":"exact"},{"name":"upregulation of protein targeting to mitochondria","type":"exact"},{"name":"upregulation of protein targeting to mitochondrion","type":"exact"},{"name":"upregulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903955"}


id: GO:0032014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ARF protein signal transduction","termid":"GO:0032012"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ARF protein signal transduction","synonyms":[{"name":"activation of ARF protein signal transduction","type":"narrow"},{"name":"stimulation of ARF protein signal transduction","type":"narrow"},{"name":"up regulation of ARF protein signal transduction","type":"exact"},{"name":"up-regulation of ARF protein signal transduction","type":"exact"},{"name":"upregulation of ARF protein signal transduction","type":"exact"}],"termid":"GO:0032014"}


id: PBO:0036266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 involved in ER-associated protein catabolic process (predicted)","termid":"PBO:0036266"}


id: GO:0061421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving oleic acid that activates or increases the rate of transcription.","definition_xrefs":["GOC:dph","PMID:20395639"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription by oleic acid (obsolete GO:0061421)","termid":"GO:0061421"}


id: PBO:0081011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 45 pseudogene 2","termid":"PBO:0081011"}


id: GO:0004635
data:
  {"annotated_genes":["SJAG_02400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104392],"is_not":false,"summary":null,"term":"GO:0004635"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(5-phosphonatoribosyl)-5'-AMP + H2O = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide.","definition_xrefs":["RHEA:20049","EC:3.5.4.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"phosphoribosyl-AMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04037","MetaCyc:HISTCYCLOHYD-RXN"],"synonyms":[{"name":"1-(5-phospho-D-ribosyl)-AMP 1,6-hydrolase activity","type":"related"},{"name":"PRAMP-cyclohydrolase activity","type":"related"},{"name":"phosphoribosyladenosine monophosphate cyclohydrolase activity","type":"related"}],"termid":"GO:0004635","terms_by_termid":{"GO:0004635":null}}


id: PBO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 2","termid":"PBO:0045042"}


id: PBO:0031420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint","termid":"PBO:0031420"}


id: FYPO:0005881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ophthalmic acid measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"ophthalmic acid absent from cell","synonyms":[{"name":"ophthalmic acid absent from cell during mitotic cell cycle","type":"related"},{"name":"ophthalmic acid absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005881"}


id: PBO:0031758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere","termid":"PBO:0031758"}


id: PBO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD2 adjacent suppressive regulatory RNA","termid":"PBO:0042943"}


id: PBO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8A","termid":"PBO:0052482"}


id: PBO:0066336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 like","termid":"PBO:0066336"}


id: GO:0050885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling balance","synonyms":[{"name":"regulation of balance","type":"related"}],"termid":"GO:0050885"}


id: FYPO:0003176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome segregation is normal (i.e. indistinguishable from wild type). Meiotic chromosome segregation is the entire process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}


id: PBO:0038457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis associated tyrosine kinase","termid":"PBO:0038457"}


id: PBO:0055621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3060","termid":"PBO:0055621"}


id: GO:0035929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any steroid that acts as a hormone into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"steroid hormone secretion","termid":"GO:0035929"}


id: PBO:0049255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin and cysteine rich domain containing 1","termid":"PBO:0049255"}


id: PBO:0038478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 1","termid":"PBO:0038478"}


id: PATO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D shape quality inhering in a bearer by virtue of the bearer's having six angles and six sides.","definition_xrefs":["Merriam-Webster:hexagonal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexagonal","termid":"PATO:0002509"}


id: PBO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates per1","termid":"PBO:0003359"}


id: PBO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 1","termid":"PBO:0060775"}


id: PBO:0062953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1","termid":"PBO:0062953"}


id: PBO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene","termid":"PBO:0044856"}


id: PBO:0090885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, Clr6 complex subunit Prw1","termid":"PBO:0090885"}


id: PBO:0065422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 8","termid":"PBO:0065422"}


id: PBO:0027135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere-nuclear_envelope_distance","termid":"PBO:0027135"}


id: GO:0006020
data:
  {"annotated_genes":["SJAG_00244","SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111554],"is_not":false,"summary":null,"term":"GO:0006020"},{"annotations":[65404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Inositol"],"synonyms":[{"name":"inositol metabolism","type":"exact"},{"name":"myo-inositol metabolism","type":"narrow"},{"name":"myo-inositol metabolic process","type":"narrow"},{"name":"vitamin Bh metabolic process","type":"exact"},{"name":"vitamin Bh metabolism","type":"exact"}],"termid":"GO:0006020","terms_by_termid":{"GO:0006020":null,"GO:0006021":null}}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: GO:0031825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1F serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1F serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1F receptor binding","type":"exact"},{"name":"type 1F serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031825"}


id: GO:0051511
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"negatively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of unidimensional cell growth","type":"exact"},{"name":"down-regulation of unidimensional cell growth","type":"exact"},{"name":"downregulation of unidimensional cell growth","type":"exact"},{"name":"inhibition of unidimensional cell growth","type":"narrow"},{"name":"negative regulation of cell elongation","type":"narrow"}],"termid":"GO:0051511","terms_by_termid":{"GO:0051517":null}}


id: PBO:0046400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L4A divergent transcript","termid":"PBO:0046400"}


id: GO:1901291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via single-strand annealing.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via single-strand annealing","synonyms":[{"name":"down regulation of double-strand break repair via single-strand annealing","type":"exact"},{"name":"down-regulation of double-strand break repair via single-strand annealing","type":"exact"},{"name":"downregulation of double-strand break repair via single-strand annealing","type":"exact"},{"name":"inhibition of double-strand break repair via single-strand annealing","type":"narrow"}],"termid":"GO:1901291"}


id: GO:1903906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"}


id: PR:Q03392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11352:SF0","OMA:SCHPO03781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.09","secondary_identifiers":["UniProtKB:Q03392"],"synonyms":[{"name":"PCNA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCNA","type":"exact"}],"termid":"PR:Q03392"}


id: PBO:0066713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 10","termid":"PBO:0066713"}


id: PBO:0063256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 2","termid":"PBO:0063256"}


id: PBO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3","termid":"PBO:0047814"}


id: GO:0033989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA = (24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity","secondary_identifiers":["Reactome:R-HSA-192331","MetaCyc:4.2.1.107-RXN","RHEA:18933","Reactome:R-HSA-193535"],"synonyms":[{"name":"(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA hydro-lyase [(24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA-forming] activity","type":"related"},{"name":"(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA hydro-lyase activity","type":"related"},{"name":"46 kDa hydratase 2 activity","type":"related"},{"name":"D-3-hydroxyacyl-CoA dehydratase activity","type":"broad"}],"termid":"GO:0033989"}


id: GO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-undecaprenyl phosphate + UDP-D-galactose = alpha-D-galactosyl-diphosphoundecaprenol + UMP.","definition_xrefs":["EC:2.7.8.6","RHEA:11652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"undecaprenyl-phosphate galactose phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01535","MetaCyc:2.7.8.6-RXN"],"synonyms":[{"name":"UDP-galactose:undecaprenyl-phosphate galactose phosphotransferase activity","type":"related"},{"name":"poly(isoprenol)-phosphate galactose phosphotransferase activity","type":"related"},{"name":"poly(isoprenol)-phosphate galactosephosphotransferase activity","type":"related"},{"name":"poly(isoprenyl)phosphate galactosephosphatetransferase activity","type":"related"},{"name":"undecaprenyl phosphate galactosyl-1-phosphate transferase activity","type":"related"}],"termid":"GO:0047360"}


id: GO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate = ADP + 4,5-bisdiphosphoinositol-1D-myo-inositol (1,2,3,6)tetrakisphosphate, and ATP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate 5-kinase activity","synonyms":[{"name":"IP7 5-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol heptakisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0033200"}


id: PBO:0074697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70G","termid":"PBO:0074697"}


id: PBO:0058297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4671","termid":"PBO:0058297"}


id: FYPO:0003196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to iron ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered RNA level during cellular response to iron ion starvation","synonyms":[{"name":"abnormal RNA level during cellular response to iron ion starvation","type":"exact"},{"name":"altered RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to iron starvation","type":"exact"},{"name":"altered RNA level during iron starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to iron ion starvation","type":"exact"},{"name":"altered transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0003196"}


id: PBO:0047736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FNDC1 antisense RNA 1","termid":"PBO:0047736"}


id: GO:0038121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 21 receptor activity","synonyms":[{"name":"CCL21 receptor activity","type":"related"}],"termid":"GO:0038121"}


id: PBO:0045849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 39","termid":"PBO:0045849"}


id: PBO:0063685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 5","termid":"PBO:0063685"}


id: PBO:0091352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in cytoplasmic translational termination","termid":"PBO:0091352"}


id: GO:0009220
data:
  {"annotated_genes":["SJAG_00444","SJAG_03708","SJAG_04709","SJAG_03164","SJAG_05024","SJAG_02887","SJAG_00779","SJAG_00197","SJAG_04354","SJAG_00694","SJAG_00964","SJAG_00533","SJAG_04713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[113230,89987,108438,86037,95070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[112087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[96628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89542,111424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[112088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[84062,111426,89543,85040,88543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[96630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-162"],"synonyms":[{"name":"pyrimidine ribonucleotide anabolism","type":"exact"},{"name":"pyrimidine ribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleotide formation","type":"exact"},{"name":"pyrimidine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009220","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null}}


id: PBO:0068495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 79, pseudogene","termid":"PBO:0068495"}


id: GO:0015762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which rhamnose is transported across a lipid bilayer, from one side of a membrane to the other. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"rhamnose transmembrane transport","synonyms":[{"name":"rhamnose transport","type":"related"}],"termid":"GO:0015762"}


id: GO:0006463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor.","definition_xrefs":["GOC:jl","Wikipedia:Steroid_hormone_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"steroid hormone receptor complex assembly","termid":"GO:0006463"}


id: GO:0031356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of chloroplast inner membrane (obsolete GO:0031356)","synonyms":[{"name":"intrinsic to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031356"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["PMID:21123617","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen-containing extracellular matrix","termid":"GO:0062023"}


id: PATO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's having the ability to go through numerous cycles of cell division while maintaining the undifferentiated state.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proliferative","termid":"PATO:0002102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self-renewal","termid":"PATO:0001398"}


id: GO:1901089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any acetate ester metabolic process that is involved in fermentation.","definition_xrefs":["GOC:sgd_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"part_of","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetate ester metabolic process involved in fermentation","synonyms":[{"name":"acetate ester metabolic process during fermentation","type":"exact"}],"termid":"GO:1901089"}


id: PBO:0055199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2624","termid":"PBO:0055199"}


id: GO:0098917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from post to pre-synapse, across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling","termid":"GO:0098917"}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: PBO:0091748
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1948954delA","termid":"PBO:0091748"}


id: PBO:0048181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 2","termid":"PBO:0048181"}


id: PBO:0059446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A19, pseudogene","termid":"PBO:0059446"}


id: GO:0033973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + 2 H2O = diphosphate + dUMP + H+ + NH4.","definition_xrefs":["RHEA:19205","EC:3.5.4.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"dCTP deaminase (dUMP-forming) activity","secondary_identifiers":["KEGG_REACTION:R07307","MetaCyc:3.5.4.30-RXN"],"synonyms":[{"name":"dCTP aminohydrolase (dUMP-forming) activity","type":"related"}],"termid":"GO:0033973"}


id: PBO:0029156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_length","termid":"PBO:0029156"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GOC:sjp","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: GO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by erythrocytes. The process often starts with binding of complement receptor 1 (CR1) on the surface of erythrocytes to a complement coated immune complex. The complex bound to erythrocyte CR1 is then transported to the liver or spleen where it is presented to phagocytes. The process ends when the complex is removed from CR1, allowing the erythrocyte to return to general circulation.","definition_xrefs":["GOC:add","PMID:11414352","PMID:24022490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by erythrocytes","secondary_identifiers":["Wikipedia:Immune_complex"],"synonyms":[{"name":"immune complex clearance by RBCs","type":"exact"},{"name":"immune complex clearance by red blood cells","type":"exact"}],"termid":"GO:0002435"}


id: PBO:0068700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 81, pseudogene","termid":"PBO:0068700"}


id: PBO:0086615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086615"}


id: SO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme cleavage site where both strands are cut at the same position.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_cleavage_junction","termid":"SO:0001688"},{"relation_name":"part_of","term_name":"blunt_end_restriction_enzyme_cleavage_site","termid":"SO:0001691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_junction","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001693"}


id: PBO:0012026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in transcriptional regulation (predicted)","termid":"PBO:0012026"}


id: GO:1902032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in response to osmotic stress.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:18636113"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress (obsolete GO:1902032)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in osmotic response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic stress response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in response to osmotic stress","type":"related"}],"termid":"GO:1902032"}


id: GO:0098928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynaptic signal transduction","synonyms":[{"name":"presynaptic signaling pathway","type":"exact"}],"termid":"GO:0098928"}


id: PBO:0086378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase of the AAA family; required for export of pre-ribosomal large subunits from the nucleus; distributed between the nucleolus, nucleoplasm, and nuclear periphery depending on growth conditions","termid":"PBO:0086378"}


id: PR:P28040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase alpha catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10322:SF3","PRO:DNx","OMA:SCHPO01433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.06c","secondary_identifiers":["UniProtKB:P28040"],"synonyms":[{"name":"DNA polymerase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLA1","type":"exact"}],"termid":"PR:P28040"}


id: PBO:0043253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 11","termid":"PBO:0043253"}


id: SO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing or overlapping no genes that is bounded on either side by a gene, or bounded by a gene and the end of the chromosome.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Intergenic_region"],"synonyms":[{"name":"intergenic region","type":"exact"}],"termid":"SO:0000605"}


id: PR:Q9USH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P31B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.04","synonyms":[{"name":"Spom972h-SPCP31B10.04","type":"exact"}],"termid":"PR:Q9USH0"}


id: PBO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SST2","termid":"PBO:0016521"}


id: PBO:0039983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5B","termid":"PBO:0039983"}


id: PBO:0059222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 4, pseudogene","termid":"PBO:0059222"}


id: GO:0000472
data:
  {"annotated_genes":["SJAG_02250","SJAG_04524","SJAG_04224","SJAG_00772"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96380,104152,105531,111708],"is_not":false,"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A1","type":"narrow"}],"termid":"GO:0000472","terms_by_termid":{"GO:0000472":null}}


id: PBO:0044135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 1","termid":"PBO:0044135"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: GO:0050191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + GTP = 3-phospho-D-glyceroyl phosphate + GDP + H+.","definition_xrefs":["EC:2.7.2.10","RHEA:23332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphoglycerate kinase (GTP) activity","secondary_identifiers":["MetaCyc:PHOSPHOGLYCERATE-KINASE-GTP-RXN","KEGG_REACTION:R01517"],"synonyms":[{"name":"GTP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0050191"}


id: PBO:0061800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 2","termid":"PBO:0061800"}


id: GO:1902496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any protein binding that is involved in negative regulation of telomere maintenance via telomerase.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:24013504","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete protein binding involved in negative regulation of telomere maintenance via telomerase (obsolete GO:1902496)","synonyms":[{"name":"protein binding involved in down regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in down-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in downregulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in inhibition of telomere maintenance via telomerase","type":"narrow"}],"termid":"GO:1902496"}


id: GO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submerged biofilm formation","synonyms":[{"name":"solid substrate biofilm formation","type":"related"}],"termid":"GO:0090605"}


id: GO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin biosynthetic process","synonyms":[{"name":"down regulation of integrin biosynthetic process","type":"exact"},{"name":"down-regulation of integrin biosynthetic process","type":"exact"},{"name":"downregulation of integrin biosynthetic process","type":"exact"},{"name":"inhibition of integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of integrin anabolism","type":"exact"},{"name":"negative regulation of integrin biosynthesis","type":"exact"},{"name":"negative regulation of integrin formation","type":"exact"},{"name":"negative regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045720"}


id: FYPO:0006872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased histone H2A phosphorylation during cellular response to IR","type":"exact"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006872"}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: PBO:0057470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 588","termid":"PBO:0057470"}


id: GO:0071306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin E","termid":"GO:0033197"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin E","synonyms":[{"name":"cellular response to DL-alpha-tocopherol acetate","type":"narrow"},{"name":"cellular response to DL-alpha-tocopheryl acetate","type":"narrow"},{"name":"cellular response to O-Acetyl-alpha-tocopherol","type":"narrow"}],"termid":"GO:0071306"}


id: GO:0097127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B3 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin B3-CDK2 complex","termid":"GO:0097127"}


id: GO:0009147
data:
  {"annotated_genes":["SJAG_03708","SJAG_04487","SJAG_03676","SJAG_04627","SJAG_00533","SJAG_00885","SJAG_02887","SJAG_04657","SJAG_04665","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[111424,89542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[89014,85963,114526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[95559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[103794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[96630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00885":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009147","terms_by_termid":{"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null}}


id: PR:Q9HGM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- get1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein get1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.10","synonyms":[{"name":"Spom972h-get1","type":"exact"},{"name":"guided entry of tail-anchored proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGM2"}


id: PBO:0050712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB1 associated protein 1","termid":"PBO:0050712"}


id: PBO:0075800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 like 2 pseudogene 1","termid":"PBO:0075800"}


id: PBO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(5)","termid":"PBO:0015247"}


id: SO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological DNA region implicated in epigenomic changes caused by mechanisms other than changes in the underlying DNA sequence. This includes, nucleosomal histone post-translational modifications, nucleosome depletion to render DNA accessible and post-replicational base modifications such as cytosine modification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified_region","synonyms":[{"name":"epigenetically modified region","type":"related"}],"termid":"SO:0001720"}


id: PBO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C9orf78 ortholog","termid":"PBO:0000501"}


id: PATO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001224 real number (obsolete PATO:0001224)","termid":"PATO:0001224"}


id: PBO:0003360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl pyrophosphate synthetase","termid":"PBO:0003360"}


id: PBO:0027358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027358"}


id: GO:0140802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal glycine + NAD+ = [protein]-C-terminal O-(ADP-D-ribosyl)-glycine + nicotinamide.","definition_xrefs":["PMID:28525742","RHEA:58268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-C-terminal glycine ADP-ribosyltransferase activity","termid":"GO:0140802"}


id: PBO:0066697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 1 homolog","termid":"PBO:0066697"}


id: GO:0050903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an integrin-dependent strong adhesive bond between leukocytes and blood vessel endothelial cells which is dependent on prior activation of the leukocyte and leads to the firm attachment of the leukocyte to the endothelial surface, typically the third step in cellular extravasation.","definition_xrefs":["PMID:14708592","PMID:14680625","PMID:7507411","PMID:8600538","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"leukocyte activation-dependent arrest","termid":"GO:0050903"}


id: FYECO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which carbendazim was added to the experimental medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ carbendazim","synonyms":[{"name":"CBZ added","type":"exact"},{"name":"MBC added","type":"exact"},{"name":"mecarzole added","type":"exact"}],"termid":"FYECO:0000290"}


id: GO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"}],"termid":"GO:0002591"}


id: GO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of norepinephrine or epinephrine in the bloodstream.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine catabolic process","termid":"GO:0042419"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine catabolic process in blood stream","synonyms":[{"name":"noradrenaline-adrenalin catabolic process in blood stream","type":"exact"}],"termid":"GO:0001995"}


id: PBO:0004771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs23 (predicted)","termid":"PBO:0004771"}


id: GO:0031270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myosin-based contraction and retraction of a pseudopodium.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"pseudopodium organization","termid":"GO:0031268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudopodium retraction","termid":"GO:0031270"}


id: PBO:0055021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2436","termid":"PBO:0055021"}


id: GO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase III, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"RNA polymerase III promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001110"}


id: GO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic (S)-hydroxynitrile = an aromatic aldehyde + cyanide.","definition_xrefs":["RHEA:54660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aromatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["MetaCyc:RXN-11732","KEGG_REACTION:R09359"],"termid":"GO:0052892"}


id: PBO:0039376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 1","termid":"PBO:0039376"}


id: GO:0006567
data:
  {"annotated_genes":["SJAG_02450","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76810,90778],"is_not":false,"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine metabolic process","termid":"GO:0006566"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"threonine catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THREOCAT-PWY","UM-BBD_pathwayID:met"],"synonyms":[{"name":"threonine breakdown","type":"exact"},{"name":"threonine catabolism","type":"exact"},{"name":"threonine degradation","type":"exact"}],"termid":"GO:0006567","terms_by_termid":{"GO:0006567":null}}


id: GO:0030103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of vasopressin from secretory granules into the blood.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vasopressin secretion","termid":"GO:0030103"}


id: PBO:0076476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 1, ATP binding cassette subfamily B member","termid":"PBO:0076476"}


id: GO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,6-dichlorocatechol + O2 = 2 H+ + 2,5-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0655"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorocatechol 1,2-dioxygenase activity (obsolete GO:0018575)","termid":"GO:0018575"}


id: PBO:0088175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylulokinase; converts D-xylulose and ATP to xylulose 5-phosphate and ADP; rate limiting step in fermentation of xylulose; required for xylose fermentation by recombinant S. cerevisiae strains","termid":"PBO:0088175"}


id: FYPO:0001956
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115659],"is_not":false,"summary":null,"term":"FYPO:0001956"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"spherical cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"orb","type":"exact"}],"termid":"FYPO:0001956","terms_by_termid":{"FYPO:0001956":null}}


id: PBO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 2","termid":"PBO:0044002"}


id: PBO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.95","termid":"PBO:0005150"}


id: PATO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000218 repair function (obsolete PATO:0000218)","termid":"PATO:0000218"}


id: GO:0140030
data:
  {"annotated_genes":["SJAG_02500","SJAG_03230","SJAG_02701","SJAG_03628","SJAG_00941","SJAG_00184","SJAG_03345","SJAG_02625","SJAG_04396","SJAG_04384","SJAG_00052","SJAG_05252","SJAG_00591","SJAG_00837","SJAG_01325","SJAG_02992"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"},{"annotations":[79304,74640,78099,70127,76331,78148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"},{"annotations":[77802,77988,76454,75368,78325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035064"},{"annotations":[75138,74882,70009,77333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031593"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon post-translation modification of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00184":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_00941":null,"SJAG_01325":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_02992":null,"SJAG_03230":null,"SJAG_03345":null,"SJAG_03628":null,"SJAG_04384":null,"SJAG_04396":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"modified protein binding","type":"related"}],"termid":"GO:0140030","terms_by_termid":{"GO:0031593":null,"GO:0035064":null,"GO:0036435":null,"GO:0070577":null}}


id: PBO:0068670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 51, pseudogene","termid":"PBO:0068670"}


id: GO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002582"}


