# terms

id: FYPO:0002512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein palmitoylation during meiosis","synonyms":[{"name":"decreased protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"reduced protein palmitoylation during meiosis","type":"exact"}],"termid":"FYPO:0002512"}


id: PBO:0036543
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic primordial dwarfism","termid":"PBO:0036543"}


id: FYPO:0003967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lover than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in stationary phase","synonyms":[{"name":"decreased protein accumulation in stationary phase","type":"related"},{"name":"reduced protein level in stationary phase","type":"exact"}],"termid":"FYPO:0003967"}


id: PBO:0029368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029368"}


id: FYPO:0002901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"},{"relation_name":"is_a","term_name":"normal protein localization to kinetochore","termid":"FYPO:0005042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to kinetochore during vegetative growth","synonyms":[{"name":"normal protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"normal protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002901"}


id: PBO:0072840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30L antisense RNA 1 (head to head)","termid":"PBO:0072840"}


id: PBO:0003949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.11","termid":"PBO:0003949"}


id: PBO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 4","termid":"PBO:0042446"}


id: MOD:01970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl glutamic acid, forming an isopeptide bond with a free glutamic acid.","definition_xrefs":["Unimod:450","PubMed:10747868","PubMed:23434852","RESID:AA0612","PubMed:1680872","PubMed:15525938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl glutamic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanedioic acid","type":"exact"},{"name":"(2S)-2-[(4S)-4-amino-4-carboxybutanamido]pentanedioic acid","type":"exact"},{"name":"2-([4-azanyl-4-carboxybutanoyl]azanyl)pentanedioic acid","type":"exact"},{"name":"5-glutamyl glutamic acid","type":"exact"},{"name":"Glu","type":"related"},{"name":"MOD_RES 5-glutamyl glutamate","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-Glu","type":"exact"},{"name":"N-(gamma-L-glutamyl)-L-glutamic acid","type":"exact"},{"name":"gamma-glutamylglutamate","type":"exact"},{"name":"isoglutamyl glutamic acid","type":"exact"},{"name":"isoglutamyl monoglutamic acid","type":"exact"},{"name":"monoglutamyl","type":"related"}],"termid":"MOD:01970"}


id: FYPO:0004144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is decreased during a cellular response to nitrosative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalase activity","termid":"FYPO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased catalase activity during cellular response to nitrosative stress","synonyms":[{"name":"decreased catalase activity during nitrosative stress","type":"exact"},{"name":"reduced catalase activity during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0004144"}


id: GO:0019314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"D-allose metabolic process","synonyms":[{"name":"D-allose metabolism","type":"exact"}],"termid":"GO:0019314"}


id: GO:0099180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of Zn2+ ions from the cytoplasm into the lumen of a cytoplasmic vesicle.","definition_xrefs":["PMID:9990090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into synaptic vesicle","synonyms":[{"name":"Zn2+ import into synaptic vesicle","type":"exact"},{"name":"zinc import into synaptic vesicle","type":"exact"}],"termid":"GO:0099180"}


id: PBO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 1","termid":"PBO:0043542"}


id: PR:O74814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulation of nuclear pre-mRNA domain-containing protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0400 protein C337.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.03","secondary_identifiers":["UniProtKB:O74814"],"synonyms":[{"name":"Spom972h-RPRD1A","type":"exact"}],"termid":"PR:O74814"}


id: FYPO:0006534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell periphery during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to cell periphery during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen deprivation","type":"exact"},{"name":"protein absent from cell periphery during nitrogen starvation","type":"related"},{"name":"protein localization to cell periphery abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006534"}


id: PBO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 15","termid":"PBO:0060027"}


id: GO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to lipid phosphate phosphohydrolase-3.","definition_xrefs":["PMID:16099422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta3 integrin-LPP3 complex","synonyms":[{"name":"ITGAV-ITGB3-PPAP2B complex","type":"narrow"}],"termid":"GO:0071129"}


id: GO:0071519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of actin filament bundle formation that occurs in the context of assembling an actomyosin contractile ring during cytokinesis.","definition_xrefs":["GOC:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"actomyosin contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle assembly involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071519"}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["UniProtKB:O74913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: GO:1902337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["PMID:12202035","GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"regulation of apoptosis involved in development","type":"related"},{"name":"regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902337"}


id: GO:0016210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.","definition_xrefs":["EC:2.3.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"naringenin-chalcone synthase activity","secondary_identifiers":["RHEA:11128","MetaCyc:NARINGENIN-CHALCONE-SYNTHASE-RXN"],"synonyms":[{"name":"DOCS","type":"narrow"},{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"}],"termid":"GO:0016210"}


id: PBO:0048289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 1","termid":"PBO:0048289"}


id: GO:0005785
data:
  {"annotated_genes":["SJAG_01558","SJAG_00360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90851,106279],"is_not":false,"summary":null,"term":"GO:0005785"}]},"cv_name":"cellular_component","definition":"A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"signal recognition particle receptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SR complex","type":"exact"},{"name":"docking protein complex","type":"related"}],"termid":"GO:0005785","terms_by_termid":{"GO:0005785":null}}


id: GO:0090209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:tb","GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"negatively_regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"}


id: GO:0038181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a bile acid and transmitting the signal to initiate a change in cell activity. A bile acid is any member of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["PMID:10334992","GOC:bf","PMID:12718893"],"gene_count":0,"genotype_count":0,"name":"obsolete bile acid receptor activity (obsolete GO:0038181)","termid":"GO:0038181"}


id: GO:0033639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to water (obsolete GO:0033639)","termid":"GO:0033639"}


id: GO:0032069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nuclease activity","synonyms":[{"name":"nuclease regulator activity","type":"related"}],"termid":"GO:0032069"}


id: PBO:0053952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1257","termid":"PBO:0053952"}


id: GO:0008141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A glue which attaches the pupae to the substrate during metamorphosis, as in, but not restricted to, the true flies (Diptera, ncbi_taxonomy_id:7147).","definition_xrefs":["PMID:825230"],"gene_count":0,"genotype_count":0,"name":"obsolete puparial glue (sensu Diptera) (obsolete GO:0008141)","synonyms":[{"name":"puparial glue (sensu Diptera)","type":"exact"}],"termid":"GO:0008141"}


id: FYPO:0006734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins later than normal.","definition_xrefs":["PomBase:mah","PMID:22718908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0006734"}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: GO:0010168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A novel compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species.","definition_xrefs":["PMID:11577182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ER body","synonyms":[{"name":"endoplasmic reticulum body","type":"exact"}],"termid":"GO:0010168"}


id: PBO:0087405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate receptor of the glucose-induced degradation-deficient (GID) complex that targets gluconeogenic enzymes for proteasomal degradation upon switch from ethanol to glucose as a carbon source; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; protein abundance increases in response to DNA replication stress","termid":"PBO:0087405"}


id: GO:0007247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (mating sensu Saccharomyces) (obsolete GO:0007247)","synonyms":[{"name":"activation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007247"}


id: PBO:0040100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"artemin","termid":"PBO:0040100"}


id: PBO:0065080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase 2B, pseudogene","termid":"PBO:0065080"}


id: GO:0019337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrachloroethylene, a derivative of ethene with the hydrogen atoms replaced by chlorines.","definition_xrefs":["PMID:7988892","PMID:8663199","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrachloroethylene catabolic process","secondary_identifiers":["MetaCyc:PCEDEG-PWY","UM-BBD_pathwayID:tce2"],"synonyms":[{"name":"tetrachloroethene catabolic process","type":"exact"},{"name":"tetrachloroethene catabolism","type":"exact"},{"name":"tetrachloroethylene breakdown","type":"exact"},{"name":"tetrachloroethylene catabolism","type":"exact"},{"name":"tetrachloroethylene degradation","type":"exact"}],"termid":"GO:0019337"}


id: PBO:0086968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit for Glc7p type-1 protein phosphatase (PP1); tethers Glc7p to Gsy2p glycogen synthase, binds Hsf1p heat shock transcription factor, required for induction of some HSF-regulated genes under heat shock; GAC1 has a paralog, PIG1, that arose from the whole genome duplication","termid":"PBO:0086968"}


id: GO:1901681
data:
  {"annotated_genes":["SJAG_01351","SJAG_02464","SJAG_04842","SJAG_02734","SJAG_01269","SJAG_03362","SJAG_03755","SJAG_03743","SJAG_00706","SJAG_03985","SJAG_01458","SJAG_05181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93591,95842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[100018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[94419,88856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904047"},{"annotations":[96093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"},{"annotations":[93843,106658,85098,93842,108360,109771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a sulfur compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_01269":null,"SJAG_01351":null,"SJAG_01458":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03362":null,"SJAG_03743":null,"SJAG_03755":null,"SJAG_03985":null,"SJAG_04842":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sulfur compound binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfur molecular entity binding","type":"exact"}],"termid":"GO:1901681","terms_by_termid":{"GO:0030975":null,"GO:0030976":null,"GO:0036042":null,"GO:0043295":null,"GO:1904047":null}}


id: GO:0008162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclodiene resistance (obsolete GO:0008162)","synonyms":[{"name":"cyclodiene resistance","type":"exact"}],"termid":"GO:0008162"}


id: PBO:0003760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein Fis1 (predicted)","termid":"PBO:0003760"}


id: GO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus under conditions of oxidative stress.","definition_xrefs":["PMID:9585505","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus in response to oxidative stress (obsolete GO:0036283)","synonyms":[{"name":"positive regulation of transcription factor import into nucleus in response to hydrogen peroxide","type":"related"}],"termid":"GO:0036283"}


id: PBO:0064839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R12A antisense RNA 2","termid":"PBO:0064839"}


id: FYPO:0003290
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of the glycan moiety of a glycoprotein differs from wild type.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"output_of","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal glycoprotein glycan structure","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0003290","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0062657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 7 (gene/pseudogene)","termid":"PBO:0062657"}


id: GO:0009450
data:
  {"annotated_genes":["SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84039,85010],"is_not":false,"summary":null,"term":"GO:0009450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid metabolic process","termid":"GO:0009448"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"gamma-aminobutyric acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:4AMINOBUTMETAB-PWY"],"synonyms":[{"name":"4-aminobutanoate catabolic process","type":"exact"},{"name":"4-aminobutanoate catabolism","type":"exact"},{"name":"4-aminobutyrate catabolic process","type":"exact"},{"name":"4-aminobutyrate catabolism","type":"exact"},{"name":"GABA catabolic process","type":"exact"},{"name":"GABA catabolism","type":"exact"},{"name":"gamma-aminobutyric acid breakdown","type":"exact"},{"name":"gamma-aminobutyric acid catabolism","type":"exact"},{"name":"gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:0009450","terms_by_termid":{"GO:0009450":null}}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: PBO:0071774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 2","termid":"PBO:0071774"}


id: PBO:0062606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 1 pseudogene","termid":"PBO:0062606"}


id: PBO:0109546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex WD repeat (scaffold) subunit, striatin Csc3","termid":"PBO:0109546"}


id: FYPO:0007508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:17434129","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007508"}


id: RO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts during y if and only if the time point at which x starts is after or equivalent to the time point at which y starts and before or equivalent to the time point at which y ends. Formally: x existence starts during y iff α(x) >= α(y) & α(x) <= ω(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_overlaps","termid":"RO:0002490"},{"relation_name":"is_a","term_name":"existence_starts_during_or_after","termid":"RO:0002496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_during","termid":"RO:0002488"}


id: PBO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 1","termid":"PBO:0052592"}


id: PBO:0030372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cobalt","termid":"PBO:0030372"}


id: FYPO:0000573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal shmoo formation","synonyms":[{"name":"normal conjugation tube formation","type":"exact"},{"name":"normal mating projection assembly","type":"exact"},{"name":"normal mating projection formation","type":"exact"},{"name":"normal shmoo assembly","type":"exact"},{"name":"shmoo formation: normal","type":"related"}],"termid":"FYPO:0000573"}


id: PBO:0068111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 418","termid":"PBO:0068111"}


id: GO:0051048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of secretion","synonyms":[{"name":"down regulation of secretion","type":"exact"},{"name":"down-regulation of secretion","type":"exact"},{"name":"downregulation of secretion","type":"exact"},{"name":"inhibition of secretion","type":"narrow"}],"termid":"GO:0051048"}


id: PBO:0045388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP9 antisense RNA 1","termid":"PBO:0045388"}


id: GO:0006729
data:
  {"annotated_genes":["SJAG_03275","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86889,105049],"is_not":false,"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process","termid":"GO:0046146"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0042559"],"is_obsolete":false,"name":"tetrahydrobiopterin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5,6,7,8-tetrahydrobiopterin biosynthetic process","type":"exact"},{"name":"tetrahydrobiopterin anabolism","type":"exact"},{"name":"tetrahydrobiopterin biosynthesis","type":"exact"},{"name":"tetrahydrobiopterin formation","type":"exact"},{"name":"tetrahydrobiopterin synthesis","type":"exact"}],"termid":"GO:0006729","terms_by_termid":{"GO:0006729":null}}


id: PBO:0059017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 3","termid":"PBO:0059017"}


id: PR:Q09869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12075:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.05c","secondary_identifiers":["UniProtKB:Q09869"],"synonyms":[{"name":"SPAC12G12.05c","type":"related"},{"name":"Spom972h-TAF9","type":"exact"},{"name":"TBP-associated factor 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09869"}


id: GO:1902834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline import into cell.","definition_xrefs":["PMID:24344203","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of proline import across plasma membrane","synonyms":[{"name":"regulation of proline import into cell","type":"exact"}],"termid":"GO:1902834"}


id: GO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which chromatin structure of nonrepetitive regions of DNA is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["GOC:jl","PMID:10811823"],"gene_count":0,"genotype_count":0,"name":"obsolete nonrepetitive DNA condensation (obsolete GO:0044852)","synonyms":[{"name":"nonrepetitive DNA packaging","type":"exact"}],"termid":"GO:0044852"}


id: PBO:0080012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 14","termid":"PBO:0080012"}


id: PBO:0059972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 17","termid":"PBO:0059972"}


id: GO:0007212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:36757901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled dopamine receptor signaling pathway","synonyms":[{"name":"dopamine receptor signalling pathway","type":"broad"}],"termid":"GO:0007212"}


id: PBO:0072445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 9","termid":"PBO:0072445"}


id: PBO:0075070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 119","termid":"PBO:0075070"}


id: PBO:0089894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent epimerase/dehydratase","termid":"PBO:0089894"}


id: PBO:0084275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the fusion of ER-derived COPII transport vesicles with the Golgi; interacts with Yip1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; homolog of human YIPF3","termid":"PBO:0084275"}


id: PBO:0042037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 90B","termid":"PBO:0042037"}


id: GO:0048907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line ganglion over time, from its formation to the mature structure. The anterior lateral line ganglion develops from cranial ectodermal placodes situated between the eye and ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line ganglion development","termid":"GO:0048890"},{"relation_name":"part_of","term_name":"anterior lateral line system development","termid":"GO:0048898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line ganglion development","synonyms":[{"name":"gALL development","type":"exact"}],"termid":"GO:0048907"}


id: PBO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_zinc_level","termid":"PBO:0030116"}


id: GO:0030210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"heparin metabolic process","termid":"GO:0030202"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"heparin biosynthetic process","synonyms":[{"name":"heparan sulfate biosynthetic process","type":"related"},{"name":"heparin anabolism","type":"exact"},{"name":"heparin biosynthesis","type":"exact"},{"name":"heparin formation","type":"exact"},{"name":"heparin synthesis","type":"exact"}],"termid":"GO:0030210"}


id: GO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric duct over time, from its formation to the mature structure. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney.","definition_xrefs":["PMID:15647339","GOC:mtg_kidney_jan10","ZFA:0000150","XAO:0000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct development","termid":"GO:0039022"}


id: GO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland cord. Epithelial cells of the mammary cord give it its funnel-like shape and some are cornified.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland cord morphogenesis","synonyms":[{"name":"epithelial cell differentiation involved in mammary gland sprout morphogenesis","type":"related"}],"termid":"GO:0060653"}


id: GO:1901792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate biosynthetic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate anabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate biosynthesis","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate formation","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate synthesis","type":"exact"}],"termid":"GO:1901792"}


id: PBO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglutamate synthase","termid":"PBO:0060455"}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: GO:2000373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isomerase activity","termid":"GO:0010912"},{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"regulation of DNA topoisomerase (ATP-hydrolyzing) activity","termid":"GO:2000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity","synonyms":[{"name":"positive regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"positive regulation of DNA topoisomerase II","type":"related"},{"name":"positive regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"positive regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"positive regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"positive regulation of topoisomerase","type":"related"},{"name":"positive regulation of topoisomerase II","type":"exact"},{"name":"positive regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000373"}


id: PBO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036036"}


id: PBO:0077986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (TGC) 8-1","termid":"PBO:0077986"}


id: GO:0098978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses glutamate as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic synapse","termid":"GO:0098978"}


id: PBO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 7","termid":"PBO:0043526"}


id: PBO:0024801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in","termid":"PBO:0024801"}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: PBO:0078663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 16-1","termid":"PBO:0078663"}


id: GO:0052144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in host (obsolete GO:0052144)","synonyms":[{"name":"negative energy taxis within host","type":"exact"}],"termid":"GO:0052144"}


id: PBO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 14","termid":"PBO:0047561"}


id: GO:0051954
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_02605","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89900,107061,95447,88314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[88315,95448,89901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"positively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amine transport","type":"narrow"},{"name":"stimulation of amine transport","type":"narrow"},{"name":"up regulation of amine transport","type":"exact"},{"name":"up-regulation of amine transport","type":"exact"},{"name":"upregulation of amine transport","type":"exact"}],"termid":"GO:0051954","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0087168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C53","termid":"PBO:0087168"}


id: PR:O74351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine desulfurase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03272","PANTHER:PTHR11601:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine desulfurase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.11c","secondary_identifiers":["UniProtKB:O74351"],"synonyms":[{"name":"Spom972h-NFS1","type":"exact"}],"termid":"PR:O74351"}


id: PATO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of ratio of the bearer's output to the bearer's input.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efficiency","termid":"PATO:0001029"}


id: PBO:0049361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 20","termid":"PBO:0049361"}


id: FYPO:0002044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished premeiotic DNA replication","synonyms":[{"name":"absent premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0002044"}


id: PBO:0059288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 3","termid":"PBO:0059288"}


id: FYPO:0005914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form linear element that are longer than normal.","definition_xrefs":["PMID:19139281","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element morphology","termid":"FYPO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated linear element","synonyms":[{"name":"increased linear element length","type":"exact"},{"name":"long linear element","type":"exact"}],"termid":"FYPO:0005914"}


id: PBO:0051467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-42 (pseudogene)","termid":"PBO:0051467"}


id: PBO:0051546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 signal transducer pseudogene 1","termid":"PBO:0051546"}


id: PBO:0056695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific with OB-fold","termid":"PBO:0056695"}


id: FYPO:0005131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to ethanol.","definition_xrefs":["PomBase:mah","PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to ethanol","termid":"FYPO:0005131"}


id: PBO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13 (predicted)","termid":"PBO:0001135"}


id: GO:0018997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer carrier (obsolete GO:0018997)","synonyms":[{"name":"electron transfer carrier","type":"exact"}],"termid":"GO:0018997"}


id: GO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the process of heart jogging.","definition_xrefs":["GOC:signaling","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in heart jogging (obsolete GO:0003302)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0003302"}


id: FYPO:0005867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at rDNA during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005867"}


id: PBO:0113556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-K4 methyltransferase, Set1C/COMPASS complex, Set1","termid":"PBO:0113556"}


id: PBO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 4","termid":"PBO:0071809"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: PR:P78811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UTP--glucose-1-phosphate uridylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP--glucose-1-phosphate uridylyltransferase fyu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.04","secondary_identifiers":["UniProtKB:P78811"],"synonyms":[{"name":"SPCC1322.04","type":"related"},{"name":"Spom972h-UGP2","type":"exact"},{"name":"UDP-glucose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UDPGP (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UGPase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P78811"}


id: PBO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase A","termid":"PBO:0051947"}


id: PBO:0045490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 8","termid":"PBO:0045490"}


id: GO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenyl-2-acylglycerol + CDP-choline = plasmenylcholine + CMP.","definition_xrefs":["MetaCyc:2.7.8.22-RXN","EC:2.7.8.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016780"],"is_obsolete":false,"name":"1-alkenyl-2-acylglycerol choline phosphotransferase activity","secondary_identifiers":["RHEA:36227"],"synonyms":[{"name":"CDP-choline-1-alkenyl-2-acyl-glycerol phosphocholinetransferase activity","type":"related"},{"name":"CDP-choline:1-alkenyl-2-acylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0047359"}


id: GO:0002911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte anergy","termid":"GO:0002911"}


id: FYPO:0000563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G2 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic G2 phase progression","synonyms":[{"name":"abnormal G2 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G2","type":"exact"},{"name":"mitotic cell cycle progression in G2 phase: abnormal","type":"related"}],"termid":"FYPO:0000563"}


id: PBO:0109515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 2","termid":"PBO:0109515"}


id: FYECO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with uracil as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, uracil nitrogen source","termid":"FYECO:0000276"}


id: PBO:0040859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliverdin reductase A","termid":"PBO:0040859"}


id: PBO:0018074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase Oms1 (predicted)","termid":"PBO:0018074"}


id: PR:Q92340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C1F8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.02c","synonyms":[{"name":"Spom972h-shu1","type":"exact"}],"termid":"PR:Q92340"}


id: PBO:0052924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-7","termid":"PBO:0052924"}


id: SO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing sequence that is flanked by Lox-P sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanked","termid":"SO:0000357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"floxed","secondary_identifiers":["http://en.wikipedia.org/wiki/Floxed"],"termid":"SO:0000359"}


id: PBO:0064063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 97","termid":"PBO:0064063"}


id: PBO:0089771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase subunit Naa50","termid":"PBO:0089771"}


id: PBO:0039566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 62","termid":"PBO:0039566"}


id: GO:0052452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont innate immunity (obsolete GO:0052452)","synonyms":[{"name":"modulation by organism of symbiont innate immunity","type":"exact"},{"name":"modulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052452"}


id: GO:0035011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a multilayered, melanized sheath of cells around a foreign invader.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanization defense response","termid":"GO:0035006"},{"relation_name":"is_a","term_name":"encapsulation of foreign target","termid":"GO:0035010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}


id: PBO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding (predicted)","termid":"PBO:0000412"}


id: PBO:0081245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 16","termid":"PBO:0081245"}


id: PBO:0089120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Sod22","termid":"PBO:0089120"}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: PBO:0049977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIGD2A pseudogene 2","termid":"PBO:0049977"}


id: FYECO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sorbitol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sorbitol","termid":"FYECO:0000025"}


id: PBO:0089807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-containing RNA endoribonuclease","termid":"PBO:0089807"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0089768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase alpha subunit Gta1","termid":"PBO:0089768"}


id: PBO:0051203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-2","termid":"PBO:0051203"}


id: PBO:0112956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface receptor L domain-like Ecm33","termid":"PBO:0112956"}


id: PBO:0059209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 1","termid":"PBO:0059209"}


id: FYPO:0007064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 22S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:29641590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased 22S rRNA precursor level","synonyms":[{"name":"increased 22S rRNA precursor accumulation","type":"related"},{"name":"increased 22S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 22S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 22S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0007064"}


id: PBO:0061822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 12 Y-linked","termid":"PBO:0061822"}


id: GO:1905913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:22362515","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"negatively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion export across plasma membrane","synonyms":[{"name":"down regulation of calcium ion efflux from cell","type":"exact"},{"name":"down regulation of calcium ion export from cell","type":"exact"},{"name":"down-regulation of calcium ion efflux from cell","type":"exact"},{"name":"down-regulation of calcium ion export from cell","type":"exact"},{"name":"downregulation of calcium ion efflux from cell","type":"exact"},{"name":"downregulation of calcium ion export from cell","type":"exact"},{"name":"inhibition of calcium ion efflux from cell","type":"narrow"},{"name":"inhibition of calcium ion export from cell","type":"narrow"},{"name":"negative regulation of calcium ion efflux from cell","type":"exact"},{"name":"negative regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905913"}


id: PBO:0054647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2052","termid":"PBO:0054647"}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: PBO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51D-like protein 1","termid":"PBO:0001281"}


id: GO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"retina vasculature morphogenesis in camera-type eye","termid":"GO:0061299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal blood vessel morphogenesis","termid":"GO:0061304"}


id: FYPO:0003470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is increased.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"increased RNA splicing","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased mRNA splicing, via spliceosome","synonyms":[{"name":"increased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"increased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"increased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"increased splicing","type":"broad"}],"termid":"FYPO:0003470"}


id: GO:1990069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.","definition_xrefs":["PMID:21749899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal opening","termid":"GO:1990069"}


id: PBO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp108","termid":"PBO:0002484"}


id: PBO:0071670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 2","termid":"PBO:0071670"}


id: PATO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of some of it's members' ability to survive.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-viable","termid":"PATO:0001770"}


id: PBO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase Ade4","termid":"PBO:0002942"}


id: FYPO:0001539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular magnesium level","synonyms":[{"name":"normal cellular magnesium accumulation","type":"related"},{"name":"normal cellular magnesium ion level","type":"exact"},{"name":"normal cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"normal cellular magnesium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001539"}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PMID:21920317","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: PBO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1 (predicted)","termid":"PBO:0014246"}


id: PBO:0056225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E1","termid":"PBO:0056225"}


id: MOD:01449
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-3-oxoalanine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["PubMed:11435113","PubMed:17558559","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-3-oxoalanine","termid":"MOD:01169"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Oxoalanine)","termid":"MOD:01449"}


id: PBO:0080113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously transcribed tetratricopeptide repeat containing, Y-linked","termid":"PBO:0080113"}


id: GO:0009830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of abscission.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:lr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall modification involved in abscission","synonyms":[{"name":"cell wall modification during abscission","type":"related"}],"termid":"GO:0009830"}


id: PBO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal membrane protein","termid":"PBO:0090703"}


id: PBO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2 pseudogene 1","termid":"PBO:0061782"}


id: GO:1904742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["PMID:24415760","GOC:BHF_telomere","GOC:nc","GO_REF:0000059","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of telomeric DNA binding","synonyms":[{"name":"regulation of telomere binding","type":"exact"},{"name":"regulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904742"}


id: PATO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, malignant","termid":"PATO:0002097"}


id: PBO:0087912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in iron utilization and homeostasis; binds consensus site PyPuCACCCPu and activates transcription in response to changes in iron availability; in iron-replete conditions localization is regulated by Grx3p, Grx4p, and Fra2p, and promoter binding is negatively regulated via Grx3p-Grx4p binding; AFT1 has a paralog, AFT2, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087912"}


id: GO:0140403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30584105","PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"},{"relation_name":"is_a","term_name":"effector-mediated suppression of host defense response","termid":"GO:0140590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host innate immune response","synonyms":[{"name":"effector dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector triggered suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immune response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immunity","type":"exact"},{"name":"effector-triggered suppression of host immune innate response by symbiont","type":"exact"}],"termid":"GO:0140403"}


id: PBO:0027449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_spindle_pole_body_morphology_during_meiosis_II","termid":"PBO:0027449"}


id: SO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved cis-acting element that confers extreme-distance regulatory activity to an enhancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"range_extender_element","synonyms":[{"name":"REX","type":"exact"}],"termid":"SO:0002382"}


id: PBO:0049953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 3 subunit alpha","termid":"PBO:0049953"}


id: GO:0004729
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88921],"is_not":false,"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 O2 + protoporphyrinogen IX = 3 H2O2 + protoporphyrin IX.","definition_xrefs":["RHEA:25576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"},{"relation_name":"is_a","term_name":"protoporphyrinogen oxidase activity","termid":"GO:0070818"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxygen-dependent protoporphyrinogen oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PROTOPORGENOXI-RXN","Reactome:R-HSA-189423","KEGG_REACTION:R03222","EC:1.3.3.4"],"synonyms":[{"name":"protoporphyrinogen-IX:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0004729","terms_by_termid":{"GO:0004729":null}}


id: PBO:0046306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamelin","termid":"PBO:0046306"}


id: GO:0033499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, via the intermediate UDP-galactose.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactose catabolic process via UDP-galactose","secondary_identifiers":["MetaCyc:PWY-6317"],"synonyms":[{"name":"Leloir Pathway","type":"related"},{"name":"galactose breakdown via UDP-galactose","type":"exact"},{"name":"galactose catabolism via UDP-galactose","type":"exact"},{"name":"galactose degradation via UDP-galactose","type":"exact"}],"termid":"GO:0033499"}


id: GO:0010270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the oxygen evolving complex (OEC) of photosystem II on a thylakoid membrane. The OEC protects the calcium-4 manganese-5 oxide cluster which is bound to the D1 and CP43 proteins. The exact protein composition of the OEC varies between cyanobacteria and plants, and in plants consists of three extrinsic nuclear-encoded polypeptides: PsbO, PsbP and PsbQ.","definition_xrefs":["GOC:aa","PMID:16282331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II assembly","termid":"GO:0010207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"photosystem II oxygen evolving complex assembly","synonyms":[{"name":"OEC (PSII) ASSEMBLY","type":"exact"}],"termid":"GO:0010270"}


id: GO:0033651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any member of a family of organelles as found in the cytoplasm of host cells, which are membrane-bounded and contain DNA. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plastid","termid":"GO:0033651"}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: PBO:0083058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate reductase involved in tetrahydrofolate biosynthesis; required for respiratory metabolism; mutation is functionally complemented by human DHFR","termid":"PBO:0083058"}


id: GO:0031106
data:
  {"annotated_genes":["SJAG_01658","SJAG_02683","SJAG_01143","SJAG_00514","SJAG_04375","SJAG_00118","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86460,94389,98320,113545],"is_not":false,"summary":null,"term":"GO:0031106"},{"annotations":[96673,100465,90241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"}]},"cv_name":"biological_process","definition":"Control of the formation, spatial distribution, and breakdown of the septin ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton organization","termid":"GO:0032185"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_01143":null,"SJAG_01658":null,"SJAG_02683":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"septin ring organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"septin ring organisation","type":"exact"}],"termid":"GO:0031106","terms_by_termid":{"GO:0000921":null,"GO:0031106":null}}


id: PR:Q9HFE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP16F5.08c gene.","definition_xrefs":["UniProtKB:Q9HFE4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol-specific monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.08c","synonyms":[{"name":"Spom972h-SPBP16F5.08c","type":"exact"},{"name":"flavin-dependent monooxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE4"}


id: GO:1902751
data:
  {"annotated_genes":["SJAG_00883","SJAG_01805","SJAG_03602","SJAG_04486","SJAG_01000","SJAG_02342","SJAG_04332","SJAG_04597","SJAG_02592","SJAG_03067","SJAG_01456","SJAG_01901","SJAG_03309","SJAG_04140","SJAG_01837","SJAG_03486","SJAG_03592","SJAG_00214","SJAG_00117","SJAG_00256","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90944,98310,88712,84639,95003,95569,92895,105099,106869,88306,107726,112997,91112,103768,113185,84648,90371,90983,100036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[84442,97937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[91113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GOC:jl","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"positively_regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G2/M phase transition","type":"narrow"},{"name":"up regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"up-regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"upregulation of cell cycle G2/M phase transition","type":"exact"}],"termid":"GO:1902751","terms_by_termid":{"GO:0010971":null,"GO:0110032":null,"GO:1905287":null}}


id: GO:0043595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer surrounding a bacterial endospore found inside the outer endospore membrane, but outside the membrane surrounding the endospore core. It consists of peptidoglycan of a different chemical nature than that found in vegetative cell walls which results in less cross-linking of peptidoglycan.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore cortex","termid":"GO:0043595"}


id: PBO:0051146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-25 (pseudogene)","termid":"PBO:0051146"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: PBO:0074464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase acid like 3A","termid":"PBO:0074464"}


id: PBO:0040148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1 like histone lysine methyltransferase","termid":"PBO:0040148"}


id: GO:1900467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular potassium ion homeostasis.","definition_xrefs":["PMID:20412803","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular potassium ion homeostasis (obsolete GO:1900467)","synonyms":[{"name":"regulation of cellular potassium ion homeostasis","type":"exact"}],"termid":"GO:1900467"}


id: PBO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc2","termid":"PBO:0002477"}


id: PBO:0074594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 7B","termid":"PBO:0074594"}


id: PBO:0050053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, T (pseudogene)","termid":"PBO:0050053"}


id: PATO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is borderline in it its effect or force as compared to baseline or normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline intensity","termid":"PATO:0002628"}


id: GO:2000122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of stomatal complex development","termid":"GO:2000038"},{"relation_name":"negatively_regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal complex development","termid":"GO:2000122"}


id: GO:1902051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(4)-dafachronate.","definition_xrefs":["PMID:16529801","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate binding","termid":"GO:1902051"}


id: PBO:0074720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 79B","termid":"PBO:0074720"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: PBO:0081439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 292","termid":"PBO:0081439"}


id: PBO:0085111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear ubiquitin protein ligase binding protein; may regulate utilization of nonfermentable carbon sources and endocytosis of plasma membrane proteins; overproduction suppresses chs5 spa2 lethality at high temp; ubiquitinated by Rsp5p, deubiquitinated by Ubp2p; CSR2 has a paralog, ECM21, that arose from the whole genome duplication","termid":"PBO:0085111"}


id: PBO:0041391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 60","termid":"PBO:0041391"}


id: PBO:0075121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 170","termid":"PBO:0075121"}


id: PBO:0087331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin family member; required for the cytoplasm-to-vacuole targeting (Cvt) pathway, endosomal sorting and selective autophagy; has a Phox homology domain that binds phosphatidylinositol-3-phosphate; interacts with Snx4p; potential Cdc28p substrate","termid":"PBO:0087331"}


id: PBO:0078700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 2-1","termid":"PBO:0078700"}


id: PBO:0078269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 5-1","termid":"PBO:0078269"}


id: GO:0050071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-lysyl-tRNA(Lys) = 1,2-diacyl-sn-glycero-3-phospho-1'-(3'-O-L-lysyl)-sn-glycerol + tRNA(Lys).","definition_xrefs":["EC:2.3.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol lysyltransferase activity","secondary_identifiers":["MetaCyc:LYSYLTRANSFERASE-RXN","RHEA:10668"],"synonyms":[{"name":"lysylphosphatidylglycerol synthase activity","type":"exact"},{"name":"lysyltransferase activity","type":"broad"}],"termid":"GO:0050071"}


id: FYPO:0004542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"increased gene silencing","termid":"FYPO:0000577"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0006367"],"synonyms":[{"name":"increased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at telomere","type":"related"}],"termid":"FYPO:0004542"}


id: GO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal programmed cell death","type":"exact"},{"name":"down-regulation of retinal programmed cell death","type":"exact"},{"name":"downregulation of retinal programmed cell death","type":"exact"},{"name":"inhibition of retinal programmed cell death","type":"narrow"},{"name":"negative regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046671"}


id: PBO:0067336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 429, pseudogene","termid":"PBO:0067336"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: PBO:0036131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_CCR4-NOT_complex_binding","termid":"PBO:0036131"}


id: PBO:0069827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1113, pseudogene","termid":"PBO:0069827"}


id: PBO:0063630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 8","termid":"PBO:0063630"}


id: GO:0140233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts, to regulate the postsynaptic membrane potential.","definition_xrefs":["GOC:pvn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cAMP-activated cation channel activity","termid":"GO:0005222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellular cAMP-activated cation channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"intracellular cAMP activated cation channel activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0140233"}


id: GO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to BMP","termid":"GO:0071772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to BMP stimulus","synonyms":[{"name":"cellular response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071773"}


id: GO:0150015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree, which emerges near the apical pole of a neuron, and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["PMID:1720142","GOC:bc","GOC:aruk","PMID:16899232","PMID:9214543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical proximal dendrite","termid":"GO:0150015"}


id: PBO:0088586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytosine-mismatch binding protein 1, candidate TFAM ortholog","termid":"PBO:0088586"}


id: PBO:0034626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cell_separation_after_cytokinesis","termid":"PBO:0034626"}


id: PBO:0039860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 24","termid":"PBO:0039860"}


id: PBO:0072764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A15A (pseudogene)","termid":"PBO:0072764"}


id: PBO:0058861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8485","termid":"PBO:0058861"}


id: PBO:0064130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor beta","termid":"PBO:0064130"}


id: PBO:0089708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Utp15","termid":"PBO:0089708"}


id: GO:0018460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexanol + NAD+ = cyclohexanone + NADH + H+.","definition_xrefs":["EC:1.1.1.245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclohexanol dehydrogenase activity","secondary_identifiers":["RHEA:10044","UM-BBD_reactionID:r0165","MetaCyc:CYCLOHEXANOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"cyclohexanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018460"}


id: MOD:00180
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-sulfo-L-cysteine.","definition_xrefs":["PubMed:643076","PubMed:14752058","Unimod:40#C","PubMed:12876326","RESID:AA0171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 182.96-182.98 Da","termid":"MOD:00777"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-sulfo-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(sulfosulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(sulfothio)propanoic acid","type":"exact"},{"name":"3-(sulfosulfanyl)-L-alanine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"S-sulfo-L-cysteine","type":"exact"},{"name":"S-sulfocysteine","type":"exact"},{"name":"SSulfCys","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"cysteine sulfate thioester","type":"exact"},{"name":"cysteine-S-sulfonic acid","type":"exact"}],"termid":"MOD:00180"}


id: PBO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_localization","termid":"PBO:0031676"}


id: GO:1905207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["PMID:23069713","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiocyte differentiation","synonyms":[{"name":"regulation of cardiac cell differentiation","type":"exact"},{"name":"regulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905207"}


id: PR:Q9USK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BolA-like protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized bolA-like protein C4B3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.11c","secondary_identifiers":["UniProtKB:Q9USK1"],"synonyms":[{"name":"Spom972h-BOLA3","type":"exact"}],"termid":"PR:Q9USK1"}


id: PBO:0034315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neural_circuit_with","termid":"PBO:0034315"}


id: GO:0010334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans,trans-farnesyl diphosphate = a sesquiterpene + diphosphate. Sesquiterpenes are terpenes containing three isoprene units, i.e. 15 carbons.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"sesquiterpene synthase activity","termid":"GO:0010334"}


id: PR:Q9URU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URU4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C1289.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.15","synonyms":[{"name":"Spom972h-pfl5","type":"exact"}],"termid":"PR:Q9URU4"}


id: GO:0075176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP-mediated signaling in response to host (obsolete GO:0075176)","synonyms":[{"name":"negative regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"negative regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"negative regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075176"}


id: FYPO:0001104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal catalase activity","termid":"FYPO:0001104"}


id: PBO:0057813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3134","termid":"PBO:0057813"}


id: GO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a chromosome, a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosomal part (obsolete GO:0044427)","synonyms":[{"name":"chromosomal component","type":"exact"},{"name":"chromosome component","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"GO:0044427"}


id: PBO:0091845
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product is often automatically annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. However, fission yeast lacks the remaining 40 subunits found in mammals","termid":"PBO:0091845"}


id: GO:0120512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesoate + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + juvenile hormone III carboxylate + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:22412378","PMID:38741075","RHEA:43724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"farnesoate epoxidase activity","secondary_identifiers":["EC:1.14.14.128","MetaCyc:RXN-11770"],"synonyms":[{"name":"CYP15C1 activity","type":"related"}],"termid":"GO:0120512"}


id: PBO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 11","termid":"PBO:0060278"}


id: PBO:0054575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1977","termid":"PBO:0054575"}


id: PBO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporter complex subunit Ctr4","termid":"PBO:0005289"}


id: PBO:0082002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 3","termid":"PBO:0082002"}


id: PBO:0085373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis; indole-3-acetic acid, an ATP-competitive inhibitor of TORC1, accumulates upon entry into stationary phase; TOR1 has a paralog, TOR2, that arose from the whole genome duplication","termid":"PBO:0085373"}


id: GO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 6-imino-5-oxocyclohexa-1,3-dienecarboxylate + H2O2.","definition_xrefs":["EC:1.10.3.5","RHEA:17245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyanthranilate oxidase activity","secondary_identifiers":["KEGG_REACTION:R02666","MetaCyc:3-HYDROXYANTHRANILATE-OXIDASE-RXN"],"synonyms":[{"name":"3-hydroxyanthranilate:oxygen oxidoreductase activity","type":"related"},{"name":"3-hydroxyanthranilic acid oxidase activity","type":"related"}],"termid":"GO:0047561"}


id: PBO:0017741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase Rdl2 (predicted)","termid":"PBO:0017741"}


id: PBO:0066033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 2","termid":"PBO:0066033"}


id: PBO:0081815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 8, Y-linked","termid":"PBO:0081815"}


id: PBO:0076293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin binding cytoplasmic RNA interacting protein","termid":"PBO:0076293"}


id: GO:0014899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the heart, in which a decrease in cell mass and then in heart size occurs due to shrinking of the individual cells. The shrinkage is caused by protein degradation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"},{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle atrophy","termid":"GO:0014899"}


id: GO:0102797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranial + O2 + H2O = H+ + geranate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete geranial:oxygen oxidoreductase activity (obsolete GO:0102797)","termid":"GO:0102797"}


id: PBO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin A","termid":"PBO:0044192"}


id: GO:1902179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving verruculogen.","definition_xrefs":["GOC:TermGenie","PMID:23649274","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"indole alkaloid metabolic process","termid":"GO:0035834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"verruculogen metabolic process","synonyms":[{"name":"verruculogen metabolism","type":"exact"}],"termid":"GO:1902179"}


id: GO:2001305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xanthone-containing compound.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xanthone-containing compound metabolic process","synonyms":[{"name":"xanthone metabolism","type":"narrow"},{"name":"xanthone-containing compound metabolism","type":"exact"},{"name":"xanthones metabolic process","type":"exact"},{"name":"xanthones metabolism","type":"exact"}],"termid":"GO:2001305"}


id: GO:1903902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral life cycle.","definition_xrefs":["GO_REF:0000058","PMID:18005716","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"positively_regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral life cycle","synonyms":[{"name":"activation of lytic viral life cycle","type":"related"},{"name":"activation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"activation of viral infectious cycle","type":"related"},{"name":"activation of viral life cycle","type":"narrow"},{"name":"activation of viral replication","type":"related"},{"name":"positive regulation of lytic viral life cycle","type":"related"},{"name":"positive regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"positive regulation of viral infectious cycle","type":"related"},{"name":"positive regulation of viral replication","type":"related"},{"name":"up regulation of lytic viral life cycle","type":"related"},{"name":"up regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"up regulation of viral infectious cycle","type":"related"},{"name":"up regulation of viral life cycle","type":"exact"},{"name":"up regulation of viral replication","type":"related"},{"name":"up-regulation of lytic viral life cycle","type":"related"},{"name":"up-regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"up-regulation of viral infectious cycle","type":"related"},{"name":"up-regulation of viral life cycle","type":"exact"},{"name":"up-regulation of viral replication","type":"related"},{"name":"upregulation of lytic viral life cycle","type":"related"},{"name":"upregulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"upregulation of viral infectious cycle","type":"related"},{"name":"upregulation of viral life cycle","type":"exact"},{"name":"upregulation of viral replication","type":"related"}],"termid":"GO:1903902"}


id: GO:0097711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane.","definition_xrefs":["PMID:13978319","GOC:cilia","PMID:23348840","PMID:26981235","PMID:23530209","PMID:25686250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0044085","GO:0140056","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ciliary basal body-plasma membrane docking","synonyms":[{"name":"anchoring of the basal body to the plasma membrane","type":"related"},{"name":"ciliary basal body docking","type":"exact"}],"termid":"GO:0097711"}


id: PBO:0034344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-only_in_taxon","termid":"PBO:0034344"}


id: PBO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 4","termid":"PBO:0046019"}


id: PBO:0076358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 5","termid":"PBO:0076358"}


id: FYPO:0008008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which the duration of cytoplasmic microtubule growth events is longer.","definition_xrefs":["PomBase:mlr","PMID:22363481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of cytoplasmic microtubule growth events during mitotic interphase","synonyms":[{"name":"longer cytoplasmic microtubule growth events during mitotic interphase","type":"narrow"},{"name":"lower cytoplasmic microtubule catastrophe during mitotic interphase","type":"narrow"},{"name":"lower cytoplasmic microtubule catastrophe rate during mitotic interphase","type":"narrow"}],"termid":"FYPO:0008008"}


id: FYPO:0007318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which stress granule assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal stress granule assembly","synonyms":[{"name":"abnormal cytoplasmic stress granule assembly","type":"exact"},{"name":"abnormal stress granule formation","type":"exact"}],"termid":"FYPO:0007318"}


id: GO:0015194
data:
  {"annotated_genes":["SJAG_04588","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87205,100389],"is_not":false,"summary":null,"term":"GO:0015194"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-serine from one side of a membrane to the other. L-serine is the L-enantiomer of 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-serine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8932980","GO:1905361","GO:0015511"],"synonyms":[{"name":"L-serine permease activity","type":"related"},{"name":"L-serine transporter activity","type":"broad"},{"name":"serine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015194","terms_by_termid":{"GO:0015194":null}}


id: GO:0002813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"}


id: PATO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented obliquely relative to the long axis of the bearer.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obliquely striated","termid":"PATO:0002479"}


id: GO:0099615
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108294],"is_not":false,"summary":null,"term":"GO:0099615"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxyglutarate + pyruvate = alpha-ketoglutarate + D-lactate, with FAD functioning as an intermediate hydrogen acceptor.","definition_xrefs":["PMID:26774271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(D)-2-hydroxyglutarate-pyruvate transhydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-2HG-pyruvate transhydrogenase activity","type":"exact"},{"name":"R-2-hydroxyglutarate alpha-pyruvate transhydrogenase activity","type":"exact"}],"termid":"GO:0099615","terms_by_termid":{"GO:0099615":null}}


id: PBO:0074750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 109","termid":"PBO:0074750"}


id: PBO:0059448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 2","termid":"PBO:0059448"}


id: PBO:0087483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability; plays a role in copper homeostasis","termid":"PBO:0087483"}


id: PBO:0081536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 445","termid":"PBO:0081536"}


id: GO:2000098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000098"}


id: PBO:0082192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; substrates include both aromatic and aliphatic aldehydes; uses NADPH as cofactor; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0082192"}


id: PBO:0110512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] Ssd1","termid":"PBO:0110512"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: GO:0047085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetonitrile + H+ + NADPH + O2 = 4-hydroxymandelonitrile + H2O + NADP+.","definition_xrefs":["RHEA:50732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxyphenylacetonitrile 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02708","MetaCyc:1.14.13.42-RXN"],"synonyms":[{"name":"4-hydroxyphenylacetonitrile hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile monooxygenase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"exact"}],"termid":"GO:0047085"}


id: PBO:0004011
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","termid":"PBO:0004011"}


id: GO:0016413
data:
  {"annotated_genes":["SJAG_00395","SJAG_02654","SJAG_03305","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101415,69322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[107616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[98445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02654":null,"SJAG_03305":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016413","terms_by_termid":{"GO:0004414":null,"GO:0009001":null,"GO:0016287":null}}


id: GO:0055003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril assembly","termid":"GO:0030239"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cardiac myofibril assembly","synonyms":[{"name":"cardiac myofibril development","type":"exact"},{"name":"cardiac myofibril morphogenesis","type":"exact"},{"name":"heart myofibril assembly","type":"related"}],"termid":"GO:0055003"}


id: PBO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains X1 (pseudogene)","termid":"PBO:0052417"}


id: PBO:0075296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 1","termid":"PBO:0075296"}


id: MOD:01097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-benzyl-L-cysteine.","definition_xrefs":["DeltaMass:242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-benzyl-L-cysteine","termid":"MOD:01097"}


id: PBO:0085969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; YOL036W has a paralog, YIR016W, that arose from the whole genome duplication","termid":"PBO:0085969"}


id: GO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.","definition_xrefs":["EC:3.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-galactosidase activity","secondary_identifiers":["Reactome:R-HSA-2265534","Reactome:R-HSA-1605624","Reactome:R-HSA-9840795","Reactome:R-HSA-9036061","Reactome:R-HSA-1630306","Reactome:R-HSA-1606312","Reactome:R-HSA-1793217","MetaCyc:3.2.1.23-RXN","Reactome:R-HSA-2090079"],"synonyms":[{"name":"beta-D-galactanase activity","type":"related"},{"name":"beta-D-galactoside galactohydrolase activity","type":"related"},{"name":"beta-D-lactosidase activity","type":"related"},{"name":"beta-lactosidase activity","type":"related"},{"name":"exo-(1->4)-beta-D-galactanase activity","type":"related"},{"name":"hydrolact","type":"related"}],"termid":"GO:0004565"}


id: PBO:0038701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 14","termid":"PBO:0038701"}


id: GO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a stereocilium.","definition_xrefs":["GOC:rph","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"stereocilium membrane","termid":"GO:0060171"}


id: PBO:0041917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 1","termid":"PBO:0041917"}


id: FYPO:0001306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which long-chain fatty acid-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abolished lcfa-ligase activity","type":"exact"},{"name":"long-chain fatty acid-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001306"}


id: GO:0009582
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of abiotic stimulus","type":"related"}],"termid":"GO:0009582","terms_by_termid":{"GO:0050982":null}}


id: PBO:0082864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D3; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D3","termid":"PBO:0082864"}


id: PATO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000437 sleep pattern value (obsolete PATO:0000437)","termid":"PATO:0000437"}


id: FYECO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing non-fermentable carbon sources. Please note that more specific terms exist, such as glycerol and ethanol rich medium that can be used if this is known.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-fermentable carbon sources medium","termid":"FYECO:0000213"}


id: PBO:0084369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid phosphate phosphatase; catalyzes Mg(2+)-independent dephosphorylation of phosphatidic acid (PA), lysophosphatidic acid, and diacylglycerol pyrophosphate; involved in control of the cellular levels of phosphatidylinositol and PA","termid":"PBO:0084369"}


id: GO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. High molecular weight (100-300 kDa) proteins that associate with intermediate filaments to cross-link them into loose networks.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type II intermediate filament associated protein (obsolete GO:0001723)","synonyms":[{"name":"type II intermediate filament associated protein","type":"exact"}],"termid":"GO:0001723"}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: GO:0000035
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94837],"is_not":false,"summary":null,"term":"GO:0000035"}]},"cv_name":"molecular_function","definition":"Binding to an acyl group, any group formally derived by removal of the hydroxyl group from the acid function of a carboxylic acid.","definition_xrefs":["ISBN:0198506732","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acyl binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA or acyl binding","type":"broad"}],"termid":"GO:0000035","terms_by_termid":{"GO:0000035":null}}


id: PR:P40998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine thiazole synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.01","synonyms":[{"name":"Spom972h-thi2","type":"exact"},{"name":"thiazole biosynthetic enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40998"}


id: PBO:0076070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STRA6 like, pseudogene","termid":"PBO:0076070"}


id: GO:0042364
data:
  {"annotated_genes":["SJAG_00815","SJAG_02408","SJAG_03538","SJAG_00376","SJAG_02491","SJAG_03362","SJAG_00673","SJAG_02360","SJAG_01054","SJAG_04156","SJAG_00043","SJAG_00252","SJAG_00480","SJAG_03632","SJAG_02421","SJAG_00381","SJAG_01970","SJAG_03679","SJAG_01126","SJAG_01383","SJAG_01881","SJAG_02225","SJAG_04711","SJAG_00691","SJAG_00827","SJAG_01935","SJAG_04866","SJAG_01543","SJAG_03275","SJAG_05200","SJAG_00283","SJAG_00491","SJAG_02420","SJAG_04067","SJAG_04282","SJAG_04481","SJAG_04845","SJAG_00707","SJAG_02406","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[75487,110612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[101468,102606,104871,108931,110187,86888,101321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[85478,95308,95304,99303,109882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[110192,85623],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[112206,96253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[97424,110902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63633,92066,84318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[108352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[84320,92067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[84069,112240,111288,106902,103508,113678,97700,103314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[110099,112530,90865,110105,96087,103908,110518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[110106,110519,96088,110100,112531,90866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[96090,106970,106971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"water-soluble vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"water-soluble vitamin anabolism","type":"exact"},{"name":"water-soluble vitamin biosynthesis","type":"exact"},{"name":"water-soluble vitamin formation","type":"exact"},{"name":"water-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042364","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: PBO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 pseudogene 2","termid":"PBO:0047818"}


id: PBO:0089400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic meiotic pumilio family RNA-binding protein Mpf1","termid":"PBO:0089400"}


id: GO:0015751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabinose, a pentose monosaccharide that occurs in both D and L configurations, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"arabinose transmembrane transport","synonyms":[{"name":"arabinose transport","type":"related"}],"termid":"GO:0015751"}


id: PBO:0085145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 645; involved in pre-rRNA cleavage at site A2; mutation is synthetically lethal with gar1 mutation; deletion disrupts telomere maintenance by influencing expression of neighboring gene STN1; mammalian homolog nucleomethylin has been linked to nutrient availability signaling pathways and obesity","termid":"PBO:0085145"}


id: GO:0047803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + sulfite = L-cysteate + sulfide.","definition_xrefs":["EC:4.4.1.10","MetaCyc:CYSTEINE-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cysteine lyase activity","secondary_identifiers":["RHEA:20916"],"synonyms":[{"name":"L-cysteine hydrogen-sulfide-lyase (adding sulfite)","type":"related"},{"name":"L-cysteine hydrogen-sulfide-lyase (adding sulfite; L-cysteate-forming)","type":"related"},{"name":"cysteine (sulfite) lyase activity","type":"related"}],"termid":"GO:0047803"}


id: PBO:0079517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 1","termid":"PBO:0079517"}


id: GO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:10852721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nitrogenase complex","termid":"GO:0016610"}


id: GO:0010670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0010670)","synonyms":[{"name":"positive regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0010670"}


id: GO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a bitter taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of bitter taste","synonyms":[{"name":"bitter taste detection","type":"exact"},{"name":"perception of bitter taste, detection of chemical stimulus","type":"exact"},{"name":"perception of bitter taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of bitter taste","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of bitter taste","type":"exact"},{"name":"sensory transduction of bitter taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of bitter taste","type":"exact"}],"termid":"GO:0001580"}


id: MOD:01245
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to the potassium aspartate salt.","definition_xrefs":["Unimod:530#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium L-aspartate","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01245"}


id: GO:0051520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops the active process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bipolar cell growth","termid":"GO:0051517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"termination of bipolar cell growth","termid":"GO:0051520"}


id: PBO:0111759
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0111759"}


id: PBO:0087078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L39; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1; homologous to mammalian ribosomal protein L39, no bacterial homolog","termid":"PBO:0087078"}


id: PBO:0082700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Mcm2-7 hexameric helicase complex; MCM complex is important for priming origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation when activated by Cdc7p-Dbf4p in S-phase","termid":"PBO:0082700"}


id: GO:0042004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of female sex and sexual phenotypes in the hermaphroditic soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feminization of hermaphrodite soma","termid":"GO:0042004"}


id: SO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyladenosine","secondary_identifiers":["RNAMOD:001"],"synonyms":[{"name":"1-methyladenosine","type":"exact"},{"name":"m1A","type":"exact"},{"name":"one methyladenosine","type":"exact"}],"termid":"SO:0001295"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: PBO:0073651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIL1 nucleotide exchange factor","termid":"PBO:0073651"}


id: GO:0010298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocamalexic acid = camalexin + CO2 + H+.","definition_xrefs":["PMID:16766671","MetaCyc:RXN-8275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"dihydrocamalexic acid decarboxylase activity","secondary_identifiers":["RHEA:34807"],"termid":"GO:0010298"}


id: PBO:0076487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 2","termid":"PBO:0076487"}


id: PBO:0004575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Hfi1","termid":"PBO:0004575"}


id: GO:0060842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized endothelial cell acquires specialized features of an arterial endothelial cell, a thin flattened cell that lines the inside surfaces of arteries.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell differentiation","termid":"GO:0060842"}


id: GO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["Wikipedia:Corticotropin-releasing_hormone","PMID:15134857","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticotropin-releasing hormone","synonyms":[{"name":"response to CRF stimulus","type":"exact"},{"name":"response to CRH stimulus","type":"exact"},{"name":"response to corticoliberin stimulus","type":"exact"},{"name":"response to corticotropin-releasing factor stimulus","type":"exact"},{"name":"response to corticotropin-releasing hormone stimulus","type":"exact"}],"termid":"GO:0043435"}


id: MOD:01483
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a formyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formylated residue","termid":"MOD:00493"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formylated residue","synonyms":[{"name":"OFoRes","type":"exact"}],"termid":"MOD:01483"}


id: PBO:0029217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat","termid":"PBO:0029217"}


id: GO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial inner membrane (obsolete GO:0031304)","synonyms":[{"name":"intrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031304"}


id: SO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. Transfer RNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNA's corresponding amino acid is attached (by aminoacyl-tRNA synthetases). Transfer RNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tRNA_primary_transcript","termid":"SO:0000210"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TRNA"],"synonyms":[{"name":"INSDC_feature:tRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"transfer RNA","type":"related"},{"name":"transfer ribonucleic acid","type":"related"}],"termid":"SO:0000253"}


id: PATO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending to the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends to","termid":"PATO:0002463"}


id: PBO:0042511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 5","termid":"PBO:0042511"}


id: MOD:00854
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine to L-lysinium (protonated L-lysine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"protonated residue","termid":"MOD:01699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-lysine (L-lysinium) residue","termid":"MOD:00854"}


id: GO:1903169
data:
  {"annotated_genes":["SJAG_04551","SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109871,87795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rl","PMID:24125847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion membrane transport","type":"exact"},{"name":"regulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1903169","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fkh2","termid":"PBO:0013110"}


id: GO:0008248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An activity involved in the removal of an intron from a pre-mRNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA splicing factor activity (obsolete GO:0008248)","synonyms":[{"name":"pre-mRNA splicing factor activity","type":"exact"}],"termid":"GO:0008248"}


id: RO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"w 'has process component' p if p and w are processes,  w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component","termid":"RO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_process","termid":"RO:0002018"}


id: PBO:0012292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Pob3","termid":"PBO:0012292"}


id: GO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete growth hormone secretagogue-like receptor activity (obsolete GO:0001617)","synonyms":[{"name":"growth hormone secretagogue-like receptor activity","type":"exact"}],"termid":"GO:0001617"}


id: SO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat where the same sequence is repeated in the same direction. Example: GCTGA-followed by-GCTGA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Direct_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:direct","type":"exact"},{"name":"direct repeat","type":"exact"}],"termid":"SO:0000314"}


id: PBO:0057538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 654","termid":"PBO:0057538"}


id: PBO:0057092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 188","termid":"PBO:0057092"}


id: FYPO:0000789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1-NA-PP1. Cells stop growing (and may die) at a concentration of 1-NA-PP1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 1-NA-PP1","synonyms":[{"name":"hypersensitive to 1-NA-PP1","type":"exact"},{"name":"sensitive to 1-NA-PP1 during mitotic cell cycle","type":"related"},{"name":"sensitive to 1-NA-PP1 during vegetative growth","type":"exact"},{"name":"sensitive to 1-tert-butyl-3-naphthalen-1-yl-1H-pyrazolo[3,4-d]pyrimidin-4-amine","type":"exact"},{"name":"sensitive to 4-amino-1-tert-butyl-3-(1'-naphthyl)pyrazolo[3,4-d]pyrimidine","type":"exact"}],"termid":"FYPO:0000789"}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: SO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"single","termid":"SO:0000984"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_DNA_chromosome","synonyms":[{"name":"single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000956"}


id: PBO:0054559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1961","termid":"PBO:0054559"}


id: PBO:0058558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6500","termid":"PBO:0058558"}


id: PBO:0059665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 31","termid":"PBO:0059665"}


id: GO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear periphery","termid":"GO:0034399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0034399"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0034399","GO:0005634"],"is_obsolete":false,"name":"nuclear lamina","secondary_identifiers":["Wikipedia:Nuclear_lamina","NIF_Subcellular:sao1455996588"],"termid":"GO:0005652"}


id: PBO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: GO:0019697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-xylitol to form xylulose 5-phosphate. L-xylitol is converted into L-xylulose, which is then phosphorylated to L-xylulose-5-phosphate. This is converted to D-xylulose-5-phosphate via the intermediate L-ribulose-5-phosphate.","definition_xrefs":["MetaCyc:LARABITOLUTIL-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylitol catabolic process","termid":"GO:0051160"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-xylitol catabolic process to xylulose 5-phosphate","synonyms":[{"name":"L-arabitol and xylitol degradation","type":"broad"},{"name":"xylitol breakdown to xylulose 5-phosphate","type":"exact"},{"name":"xylitol degradation to xylulose 5-phosphate","type":"exact"},{"name":"xylitol utilization","type":"related"}],"termid":"GO:0019697"}


id: GO:0018009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal cysteine residue to form N-palmitoyl-L-cysteine.","definition_xrefs":["RESID:AA0060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal peptidyl-L-cysteine N-palmitoylation","termid":"GO:0018009"}


id: PBO:0066647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 1","termid":"PBO:0066647"}


id: PBO:0028125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_agglutination","termid":"PBO:0028125"}


id: PBO:0003097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Pmr1","termid":"PBO:0003097"}


id: PBO:0061004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS antisense RNA 1","termid":"PBO:0061004"}


id: PBO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1","termid":"PBO:0089714"}


id: GO:0097123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin A1-CDK2 complex","termid":"GO:0097123"}


id: GO:0014804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the terminal cisterna envelope. This space is enriched in calsequestrin.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"terminal cisterna","termid":"GO:0014802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"terminal cisterna lumen","termid":"GO:0014804"}


id: GO:0042905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 9-cis-retinoic acid, a metabolically active vitamin A derivative.","definition_xrefs":["GOC:jl","PMID:11279029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"9-cis-retinoic acid metabolic process","synonyms":[{"name":"9-cis-retinoic acid metabolism","type":"exact"}],"termid":"GO:0042905"}


id: PBO:0056944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-3 host gene","termid":"PBO:0056944"}


id: PBO:0029785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_vegetative_cell_with_abnormal_cell_morphology","termid":"PBO:0029785"}


id: GO:0034898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecyltrimethylammonium chloride + NAD(P)H + H+ + O2 = trimethylamine + hexadecanal + NAD(P)+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1373"],"gene_count":0,"genotype_count":0,"name":"obsolete hexadecyltrimethylammonium chloride monooxygenase activity (obsolete GO:0034898)","termid":"GO:0034898"}


id: GO:0021626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0582227089","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system maturation","termid":"GO:0021626"}


id: PBO:0062772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Z member 1 pseudogene","termid":"PBO:0062772"}


id: GO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment by invagination of the plasma membrane to form uncoated micropinosomes, differentiated from macropinosomes by their smaller size, on average 95 nm.","definition_xrefs":["PMID:14731589","PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"micropinocytosis","secondary_identifiers":["GO:1902540"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"single-organism micropinocytosis","type":"related"}],"termid":"GO:0044350"}


id: PBO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_alkalinity","termid":"PBO:0031498"}


id: PBO:0039433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin 3","termid":"PBO:0039433"}


id: SO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in metabolism, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic_island","synonyms":[{"name":"metabolic island","type":"exact"}],"termid":"SO:0000774"}


id: PBO:0065821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C, member RAS oncogene family","termid":"PBO:0065821"}


id: _global:has_dividend_entity
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_dividend_entity","termid":"_global:has_dividend_entity"}


id: PBO:0054623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2028","termid":"PBO:0054623"}


id: PBO:0077053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF and HNRNPL related immunoregulatory long non-coding RNA","termid":"PBO:0077053"}


id: PBO:0080421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 5","termid":"PBO:0080421"}


id: PBO:0086656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has no significant sequence similarity to any known protein","termid":"PBO:0086656"}


id: PBO:0078878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 1","termid":"PBO:0078878"}


id: PR:P04551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","UniProtKB:P04551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:P04551"}


id: PBO:0071999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 1","termid":"PBO:0071999"}


id: GO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"positively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidium development","termid":"GO:0075315"}


id: GO:2000690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast differentiation","termid":"GO:0045661"},{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"regulation of cardiac myoblast differentiation","type":"related"},{"name":"regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000690"}


id: PBO:0039671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP4B1 antisense RNA 1","termid":"PBO:0039671"}


id: PBO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A9","termid":"PBO:0047006"}


id: FYPO:0000089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methyl methanesulfonate. Cells stop growing (and may die) at a concentration of methyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to methyl methanesulfonate","synonyms":[{"name":"hypersensitive to methyl methanesulfonate","type":"exact"},{"name":"sensitive to MMS","type":"exact"},{"name":"sensitive to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0000089"}


id: PBO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 22","termid":"PBO:0043154"}


id: RO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to developmentally induce y iff x developmentally induces y or x is capable of developmentally inducing y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_developmentally_induce","termid":"RO:0002386"}


id: GO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + K+(out) = amino acid(in) + K+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"amino acid:potassium symporter activity","synonyms":[{"name":"potassium:amino acid symporter activity","type":"exact"}],"termid":"GO:0017032"}


id: GO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of taurine biosynthesis.","definition_xrefs":["PMID:18648510","PMID:24911144","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"regulation of taurine biosynthetic process","termid":"GO:0062089"}


id: PBO:0053954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1259","termid":"PBO:0053954"}


id: PBO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 5 pseudogene","termid":"PBO:0042630"}


id: PBO:0073967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 16","termid":"PBO:0073967"}


id: MOD:00358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FMN)-L-histidine.","definition_xrefs":["RESID:AA0353","PubMed:12417325","Unimod:409#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FMN)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(3-[8alpha riboflavin 5'-dihydrogen phosphate]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FMN)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FMN","type":"exact"},{"name":"8alpha-(N3'-histidyl)FMN","type":"exact"},{"name":"FMNH","type":"related"},{"name":"N(pi)-(8alpha-FMN)-histidine","type":"exact"},{"name":"Npros8aFMNHis","type":"exact"},{"name":"flavin mononucleotide","type":"related"},{"name":"pros-(8alpha-FMN)-histidine","type":"exact"}],"termid":"MOD:00358"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: PBO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.1","termid":"PBO:0000222"}


id: PBO:0045167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 1","termid":"PBO:0045167"}


id: GO:0004525
data:
  {"annotated_genes":["SJAG_02156","SJAG_01463","SJAG_04527","SJAG_03689","SJAG_04019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72940,98729,99987,106371,112505],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:15242644","PMID:11157775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203862","Reactome:R-HSA-9820840","MetaCyc:3.1.26.3-RXN","Reactome:R-HSA-9708292","Reactome:R-HSA-9708408","Reactome:R-HSA-203893","Reactome:R-HSA-426464","EC:3.1.26.3"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: PBO:0034333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_contribution_from","termid":"PBO:0034333"}


id: SO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene_member_region that encodes sequence that directly contributes to the molecular function of its gene or gene product.","definition_xrefs":["Clingen:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_gene_region","synonyms":[{"name":"functional gene region","type":"exact"}],"termid":"SO:0002188"}


id: GO:0033718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: pyranose + acceptor = 2-dehydropyranose (or 3-dehydropyranose or 2,3-didehydropyranose) + reduced acceptor, and a pyranoside + acceptor = a 3-dehydropyranoside (or 3,4-didehydropyranoside) + reduced acceptor.","definition_xrefs":["EC:1.1.99.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyranose dehydrogenase (acceptor) activity","synonyms":[{"name":"PDH","type":"related"},{"name":"pyranose dehydrogenase activity","type":"related"},{"name":"pyranose-quinone oxidoreductase activity","type":"related"},{"name":"pyranose:acceptor oxidoreductase activity","type":"related"},{"name":"quinone-dependent pyranose dehydrogenase activity","type":"related"}],"termid":"GO:0033718"}


id: PBO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5, pseudogene","termid":"PBO:0044577"}


id: GO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid and dependent on the coupling of the alpha subunit of G proteins to the hormone receptors.","definition_xrefs":["PMID:11027362","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway, G-alpha-dependent","synonyms":[{"name":"gibberellic acid mediated signalling, G-alpha-dependent","type":"exact"}],"termid":"GO:0042388"}


id: GO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thread-like connection joining two regions of ectopically paired polytene chromosomes.","definition_xrefs":["ISBN:0120649012","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome ectopic fiber","synonyms":[{"name":"polytene chromosome ectopic fibre","type":"exact"}],"termid":"GO:0005706"}


id: PBO:0085057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; required for transcriptional induction of the early meiotic-specific transcription factor IME1, also required for sporulation; contains twin cysteine-x9-cysteine motifs; deletion affects mitochondrial morphology","termid":"PBO:0085057"}


id: GO:0021731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trigeminal motor nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","GOC:dgh","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal motor nucleus development","termid":"GO:0021731"}


id: PBO:0071110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 112","termid":"PBO:0071110"}


id: PBO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Homol E","termid":"PBO:0002157"}


id: FYPO:0000023
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115613,115610,115609,115945],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_03048","SJAG_02013"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta"],"synonyms":[{"name":"cell size: decreased","type":"related"},{"name":"decreased cell size","type":"exact"},{"name":"reduced cell size","type":"exact"}],"termid":"FYPO:0000023","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0044060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocrine process","synonyms":[{"name":"regulation of endocrine system process","type":"exact"}],"termid":"GO:0044060"}


id: GO:1901263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:rjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"positively_regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp spore cell differentiation","synonyms":[{"name":"activation of sorocarp spore cell differentiation","type":"narrow"},{"name":"up regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"up-regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"upregulation of sorocarp spore cell differentiation","type":"exact"}],"termid":"GO:1901263"}


id: PBO:0029431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029431"}


id: GO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH4 protein domain, present in Bcl-2 family members. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein.","definition_xrefs":["PMID:12133724","InterPro:IPR003093","PMID:9020082","Prosite:PS01260","Prosite:PS50063","PMID:11048732","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"BH4 domain binding","termid":"GO:0051435"}


id: PR:P36625
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec7 gene.","definition_xrefs":["UniProtKB:P36625","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.03c","synonyms":[{"name":"Spom972h-rec7","type":"exact"}],"termid":"PR:P36625"}


id: PBO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR55 family, involved in ribosome biogenesis (predicted)","termid":"PBO:0000757"}


id: PBO:0057857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3168","termid":"PBO:0057857"}


id: PBO:0084834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription","termid":"PBO:0084834"}


id: GO:0016026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase core (obsolete GO:0016026)","synonyms":[{"name":"proteasome endopeptidase core","type":"exact"}],"termid":"GO:0016026"}


id: PBO:0060736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 1","termid":"PBO:0060736"}


id: GO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a cardiac muscle cell and is involved in its contraction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}


id: PBO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTT109 family histone lysine acetyltransferase","termid":"PBO:0004858"}


id: PBO:0054857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2271","termid":"PBO:0054857"}


id: GO:0052879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate = (7S,8S,9Z,12Z)-7,8-dihydroxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"9,12-octadecadienoate 8-hydroperoxide 8S-isomerase activity","secondary_identifiers":["KEGG_REACTION:R07062","MetaCyc:RXN-12758","EC:5.4.4.6"],"synonyms":[{"name":"(8R,9Z,12Z)-8-hydroperoxy-9,12-octadecadienoate mutase ((7S,8S,9Z,12Z)-5,8-dihydroxy-9,12-octadecadienoate-forming) activity","type":"related"},{"name":"8-hydroperoxide isomerase activity","type":"broad"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052879"}


id: PBO:0062448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 115 pseudogene","termid":"PBO:0062448"}


id: PBO:0044380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP1B1 antisense RNA 1","termid":"PBO:0044380"}


id: GO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase V core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in production of noncoding transcripts at target loci for silencing.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase V core binding","termid":"GO:0001049"}


id: PBO:0052081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 6","termid":"PBO:0052081"}


id: GO:0000121
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96820],"is_not":false,"summary":null,"term":"GO:0000121"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sn-glycerol 1-phosphate = glycerol + phosphate.","definition_xrefs":["RHEA:46084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"glycerol-1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glycerol phosphatase activity","type":"related"},{"name":"alpha-glycerophosphatase activity","type":"related"},{"name":"glycerol 3-phosphatase activity","type":"related"},{"name":"glycerol 3-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"glycerol-3-phosphate phosphatase activity","type":"related"}],"termid":"GO:0000121","terms_by_termid":{"GO:0000121":null}}


id: GO:0052117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host environment (obsolete GO:0052117)","synonyms":[{"name":"aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052117"}


id: GO:1990132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of misfolded proteins that are being held by the chaperone heat shock protein (Hsp) and targeting them for destruction by the Ub-proteasome machinery.","definition_xrefs":["PMID:23530227","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete release of misfolded protein from chaperone (obsolete GO:1990132)","synonyms":[{"name":"release of misfolded protein from chaperone","type":"exact"}],"termid":"GO:1990132"}


id: GO:1902790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving undecan-2-one.","definition_xrefs":["GOC:mengo_curators","PMID:4950559","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"undecan-2-one metabolic process","synonyms":[{"name":"undecan-2-one metabolism","type":"exact"}],"termid":"GO:1902790"}


id: GO:0038080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in osmosensory signaling pathway (obsolete GO:0038080)","synonyms":[{"name":"MAP kinase kinase activity involved in osmosensory signalling pathway","type":"exact"},{"name":"MAP2K activity involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKK activity involved in osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038080"}


id: GO:1901191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"negatively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"negative regulation of formation of translation initiation ternary complex","synonyms":[{"name":"down regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"down-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"downregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"downregulation of translation initiation ternary complex assembly","type":"exact"},{"name":"inhibition of formation of translation initiation ternary complex","type":"narrow"},{"name":"inhibition of translation initiation ternary complex assembly","type":"exact"},{"name":"negative regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901191"}


id: MOD:01062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because duplicate and redundant with MOD:01061. Remap to MOD:01061","definition_xrefs":["DeltaMass:197"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01062 carboxymethyl cysteinyl (obsolete MOD:01062)","synonyms":[{"name":"Carboxymethyl Cystenyl","type":"exact"}],"termid":"MOD:01062"}


id: PBO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position","termid":"PBO:0009381"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: GO:0060728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060728)","synonyms":[{"name":"negative regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"negative regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060728"}


id: PBO:0038438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 4","termid":"PBO:0038438"}


id: GO:1903101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:19037259","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol catabolic process","termid":"GO:0031161"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","termid":"GO:1903100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate breakdown","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1903101"}


id: PBO:0058043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4264","termid":"PBO:0058043"}


id: PR:Q9HE12
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 23 member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine permease C1399.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.01c","secondary_identifiers":["UniProtKB:Q9HE12"],"synonyms":[{"name":"Spom972h-SLC23A2","type":"exact"}],"termid":"PR:Q9HE12"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: GO:0046125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside metabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0046125"}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:jid","PMID:15157725","GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: GO:0030134
data:
  {"annotated_genes":["SJAG_02120","SJAG_04740","SJAG_04598","SJAG_00767","SJAG_01991","SJAG_02839","SJAG_04402","SJAG_02349","SJAG_00284","SJAG_04513","SJAG_00557","SJAG_01642","SJAG_03270","SJAG_05345","SJAG_05344","SJAG_04112","SJAG_01633","SJAG_04592","SJAG_02539","SJAG_04002","SJAG_00357","SJAG_00072","SJAG_03558","SJAG_01939","SJAG_00906","SJAG_03907","SJAG_03933","SJAG_04023","SJAG_00785","SJAG_04196","SJAG_05013","SJAG_02264","SJAG_03153"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86858,88104,89712,90831,90958,92183,92656,99810,100816,103832,104943,107267,110838,112114,112848,113026,113471,115298],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[92082,105252,89927,70810,103091,106732,74409,108497,113103,109226],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[97629,106324,92120,104551,110703],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).","definition_xrefs":["PMID:17499046","Wikipedia:COPII","PMID:11252894","PMID:22160157","PMID:8004676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04402":null,"SJAG_04513":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030138","GO:0140045"],"synonyms":[{"name":"COPII vesicle","type":"related"},{"name":"COPII-associated ER to Golgi transport vesicle","type":"exact"},{"name":"COPII-associated vesicle","type":"exact"},{"name":"COPII-coated vesicle","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle","type":"related"},{"name":"ER to Golgi transport vesicle","type":"related"},{"name":"ER-Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum to Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum-Golgi transport vesicle","type":"related"}],"termid":"GO:0030134","terms_by_termid":{"GO:0012507":null,"GO:0030127":null,"GO:0030134":null}}


id: FYPO:0007827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is normal (i.e. indistinguishable from wild type). The process results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah","GO:0044837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal actomyosin contractile ring organization","synonyms":[{"name":"normal actomyosin contractile ring organisation","type":"exact"},{"name":"normal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"normal contractile ring organization","type":"exact"}],"termid":"FYPO:0007827"}


id: PBO:0086479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial ribosomal protein of the large subunit; required for respiratory growth and for efficient translation of mitochondrial COX1 and COX3;  conditional mutant has reduced cytochrome c oxidase activity; protein increases in abundance and relocalizes to the plasma membrane upon DNA replication stress; contains and N-terminal mitochondrial targeting sequence; similar to E. coli L34 ribosomal protein","termid":"PBO:0086479"}


id: PBO:0082765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair","termid":"PBO:0082765"}


id: PBO:0068965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 209, pseudogene","termid":"PBO:0068965"}


id: PBO:0074493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAI3 antisense RNA 1","termid":"PBO:0074493"}


id: GO:0160024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Leydig cells, resulting in the expansion of a cell population. Leydig cells are interstitial cells located adjacent to the seminiferous tubules in the testis which produce testosterone.","definition_xrefs":["PMID:29632025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell proliferation","termid":"GO:0160024"}


id: GO:0016962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor-associated protein activity (obsolete GO:0016962)","synonyms":[{"name":"receptor-associated protein activity","type":"exact"}],"termid":"GO:0016962"}


id: PBO:0087541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate","termid":"PBO:0087541"}


id: PR:O14215
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA primase small subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01013","PRO:DNx","PANTHER:PTHR10536:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase small subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.10c","secondary_identifiers":["UniProtKB:O14215"],"synonyms":[{"name":"Spom972h-PRIM1","type":"exact"}],"termid":"PR:O14215"}


id: GO:0046709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of IDP, inosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"IDP metabolic process","termid":"GO:0046707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"IDP catabolic process","synonyms":[{"name":"IDP breakdown","type":"exact"},{"name":"IDP catabolism","type":"exact"},{"name":"IDP degradation","type":"exact"}],"termid":"GO:0046709"}


id: GO:0000736
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115260],"is_not":false,"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"During DSBR via single-strand annealing, the removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"removal of nonhomologous ends","termid":"GO:0000735"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000736","terms_by_termid":{"GO:0000736":null}}


id: GO:0004019
data:
  {"annotated_genes":["SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85471],"is_not":false,"summary":null,"term":"GO:0004019"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + GTP + IMP = N(6)-(1,2-dicarboxyethyl)-AMP + GDP + 3 H+ + phosphate.","definition_xrefs":["EC:6.3.4.4","RHEA:15753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"adenylosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ADENYLOSUCCINATE-SYNTHASE-RXN","KEGG_REACTION:R01135","Reactome:R-HSA-111524"],"synonyms":[{"name":"IMP--aspartate ligase activity","type":"related"},{"name":"IMP:L-aspartate ligase (GDP-forming)","type":"related"},{"name":"adenylosuccinate synthetase activity","type":"related"},{"name":"succino-AMP synthetase activity","type":"related"},{"name":"succinoadenylic kinosynthetase activity","type":"related"}],"termid":"GO:0004019","terms_by_termid":{"GO:0004019":null}}


id: GO:0001042
data:
  {"annotated_genes":["SJAG_01744"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70854],"is_not":false,"summary":null,"term":"GO:0001042"}]},"cv_name":"molecular_function","definition":"Binding to a RNA polymerase I core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of seventeen subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01744":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase I core binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001042","terms_by_termid":{"GO:0001042":null}}


id: PBO:0085580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5' RNA end processing; substrates include mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p","termid":"PBO:0085580"}


id: PR:O13620
data:
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id: GO:0051716
data:
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id: PR:O13914
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alanine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11777:SF6","OMA:SCHPO00887","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.09","secondary_identifiers":["UniProtKB:O13914"],"synonyms":[{"name":"AlaRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AARS","type":"exact"},{"name":"alanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13914"}


id: PBO:0061708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 3","termid":"PBO:0061708"}


id: PBO:0060808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit V2","termid":"PBO:0060808"}


id: PBO:0031090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_and_small_daughter_nuclei","termid":"PBO:0031090"}


id: PBO:0045094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 5","termid":"PBO:0045094"}


id: PBO:0057376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ar","termid":"PBO:0057376"}


id: PBO:0048088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 9","termid":"PBO:0048088"}


id: GO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chloro-L-lysine + AH2 + O2 = A + formaldehyde + H2O + L-2-amino-4-chloropent-4-enoate + NH4(+).","definition_xrefs":["RHEA:59888","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-chloro-allylglycine synthase activity","termid":"GO:0062146"}


id: PBO:0030607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_calcium_starvation","termid":"PBO:0030607"}


id: PBO:0052741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 33","termid":"PBO:0052741"}


id: PBO:0077826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member E","termid":"PBO:0077826"}


id: PBO:0063476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 4","termid":"PBO:0063476"}


id: PBO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 37","termid":"PBO:0070571"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:14708592","PMID:8600538","PMID:7507411","PMID:14680625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: GO:1905665
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98696],"is_not":false,"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:17640527","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion import","termid":"GO:0090280"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"is_a","term_name":"regulation of calcium ion import across plasma membrane","termid":"GO:1905664"},{"relation_name":"positively_regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion import across plasma membrane","type":"narrow"},{"name":"up regulation of calcium ion import across plasma membrane","type":"exact"},{"name":"up-regulation of calcium ion import across plasma membrane","type":"exact"},{"name":"upregulation of calcium ion import across plasma membrane","type":"exact"}],"termid":"GO:1905665","terms_by_termid":{"GO:1905665":null}}


id: PBO:0050687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 14","termid":"PBO:0050687"}


id: PBO:0080402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B divergent transcript","termid":"PBO:0080402"}


id: PBO:0074709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74A","termid":"PBO:0074709"}


id: PBO:0065118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCQ antisense RNA 1","termid":"PBO:0065118"}


id: GO:0030808
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide anabolism","type":"exact"},{"name":"regulation of nucleotide biosynthesis","type":"exact"},{"name":"regulation of nucleotide formation","type":"exact"},{"name":"regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030808","terms_by_termid":{"GO:1905706":null}}


id: PBO:0036496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein Rnc1","termid":"PBO:0036496"}


id: PBO:0073283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 4","termid":"PBO:0073283"}


id: PR:000027731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:15184401","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo2/UnMod","pombase_gene_id":"SPCC645.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: myosin type-2 heavy chain 1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-myo2/UnMod","type":"exact"},{"name":"myo2/UnMod","type":"exact"}],"termid":"PR:000027731"}


id: GO:0075102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont MAP kinase-mediated signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont MAP kinase-mediated signal transduction (obsolete GO:0075102)","termid":"GO:0075102"}


id: PBO:0081568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 493","termid":"PBO:0081568"}


id: PBO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 1","termid":"PBO:0047339"}


id: GO:2001299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["PMID:10510241","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","termid":"GO:2001298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine catabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine breakdown","type":"exact"},{"name":"N(omega),N(omega)-dimethyl-L-arginine catabolism","type":"exact"},{"name":"N(omega),N(omega)-dimethyl-L-arginine degradation","type":"exact"}],"termid":"GO:2001299"}


id: GO:1903512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytanic acid.","definition_xrefs":["GOC:dph","PMID:16799769","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"phytanic acid metabolic process","synonyms":[{"name":"phytanic acid metabolism","type":"exact"}],"termid":"GO:1903512"}


id: GO:0004075
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94935],"is_not":false,"summary":null,"term":"GO:0004075"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.","definition_xrefs":["EC:6.3.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"biotin carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:BIOTIN-CARBOXYL-RXN","RHEA:13501"],"synonyms":[{"name":"biotin carboxylase (component of acetyl CoA carboxylase) activity","type":"related"},{"name":"biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming) activity","type":"related"}],"termid":"GO:0004075","terms_by_termid":{"GO:0004075":null}}


id: PBO:0114430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR550A3 host gene","termid":"PBO:0114430"}


id: PBO:0078580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53C, pseudogene","termid":"PBO:0078580"}


id: PBO:0078967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 6-1","termid":"PBO:0078967"}


id: PBO:0005088
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CSL response element 5'-GTG[G/A]GAA-3'","termid":"PBO:0005088"}


id: PBO:0056136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and CTNNBIP1 domain containing","termid":"PBO:0056136"}


id: PBO:0086258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates meiotic SPB cohesion and telomere clustering; localizes to both spindle pole bodies (SPBs) and telomeres; required for bouquet formation, effective homolog pairing, ordered cross-over distribution, sister chromatid cohesion at meiotic telomeres, chromosomal segregation and telomere-led rapid prophase movement","termid":"PBO:0086258"}


id: PBO:0081826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 749","termid":"PBO:0081826"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: PBO:0066569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 2","termid":"PBO:0066569"}


id: FYPO:0005980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is decreased.","definition_xrefs":["PomBase:mah","PMID:27075176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament bundle assembly","termid":"FYPO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased actin filament bundle assembly","synonyms":[{"name":"actin bundling decreased","type":"exact"},{"name":"decreased actin bundling","type":"exact"},{"name":"decreased actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"decreased actin filament bundle assembly during vegetative growth","type":"exact"},{"name":"reduced filament bundle assembly","type":"exact"}],"termid":"FYPO:0005980"}


id: PBO:0058341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4714","termid":"PBO:0058341"}


id: GO:0033904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,6-alpha-D-glucosidic linkages in dextran.","definition_xrefs":["EC:3.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"dextranase activity","secondary_identifiers":["MetaCyc:3.2.1.11-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan 6-glucanohydrolase activity","type":"related"},{"name":"DL 2","type":"related"},{"name":"alpha-1,6-glucan-6-glucanohydrolase activity","type":"related"},{"name":"alpha-D-1,6-glucan-6-glucanohydrolase activity","type":"related"},{"name":"dextran hydrolase activity","type":"related"},{"name":"dextranase DL 2 activity","type":"narrow"},{"name":"endo-dextranase activity","type":"related"},{"name":"endodextranase activity","type":"related"}],"termid":"GO:0033904"}


id: PR:O74895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl15 gene.","definition_xrefs":["UniProtKB:O74895","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.11","synonyms":[{"name":"Spom972h-rpl15","type":"exact"}],"termid":"PR:O74895"}


id: PBO:0089541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S16","termid":"PBO:0089541"}


id: PBO:0043747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 1","termid":"PBO:0043747"}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: PBO:0066490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 1","termid":"PBO:0066490"}


id: PBO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD family phospholipase","termid":"PBO:0090618"}


id: GO:0042941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-alanine, the D-enantiomer of 2-aminopropanoic acid,  is transported across a lipid bilayer, from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah","GO:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"alanine transport","termid":"GO:0032328"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"D-alanine transmembrane transport","termid":"GO:0042941"}


id: GO:0034936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,6-dichloro-3-methylcatechol + O2 = 3,5-dichloro-3-methyl-cis,cis-muconate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0959"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,6-dichloro-3-methylcatechol 1,2-dioxygenase activity (obsolete GO:0034936)","termid":"GO:0034936"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: GO:0043467
data:
  {"annotated_genes":["SJAG_01376","SJAG_05006","SJAG_00963","SJAG_02785","SJAG_05314","SJAG_01062","SJAG_00685","SJAG_02592","SJAG_02433","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78181,87513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[75374,72453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[93147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[86279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[94191,106219,90948,108406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903715"},{"annotations":[85799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[75373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and the processes involved in the liberation of energy from these substances.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01062":null,"SJAG_01376":null,"SJAG_02433":null,"SJAG_02592":null,"SJAG_02785":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of generation of precursor metabolites and energy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043467","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:1903715":null,"GO:1905857":null,"GO:2001172":null}}


id: GO:0009125
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113684,112612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside monophosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside monophosphate breakdown","type":"exact"},{"name":"nucleoside monophosphate catabolism","type":"exact"},{"name":"nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009125","terms_by_termid":{"GO:0009159":null}}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: PATO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular velocity","termid":"PATO:0001413"}


id: PBO:0079653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 1","termid":"PBO:0079653"}


id: PBO:0090206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic isoleucine-tRNA ligase Irs1","termid":"PBO:0090206"}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_04992","SJAG_01275","SJAG_00311","SJAG_02759","SJAG_03697","SJAG_03413","SJAG_04330","SJAG_00882","SJAG_03466","SJAG_02830","SJAG_01454","SJAG_02427","SJAG_04492","SJAG_02436","SJAG_02644","SJAG_01606","SJAG_00271","SJAG_04491","SJAG_03719","SJAG_00689","SJAG_00722","SJAG_01839","SJAG_03496","SJAG_01811","SJAG_04395","SJAG_01494","SJAG_04346"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86210,87403,88669,89379,89472,89779,91403,94535,94541,95747,96025,96956,99068,100052,102524,104477,107332,108802,112738,113161,113795,114692,115398],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[84525,88579,94447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[88580,108952,84526],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0030684","GO:0005575"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: PBO:0027641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_during_meiosis_II","termid":"PBO:0027641"}


id: PBO:0073956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 5","termid":"PBO:0073956"}


id: PBO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_sterol_distribution","termid":"PBO:0031295"}


id: FYPO:0004015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of mitochondria.","definition_xrefs":["PomBase:mah","PMID:2065367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"mitochondria present in normal numbers","synonyms":[{"name":"mitochondria present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"mitochondria present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004015"}


id: FYPO:0005231
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115601],"is_not":false,"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26624998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability upon glucose starvation","termid":"FYPO:0004162"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability in stationary phase upon glucose starvation","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability in stationary phase upon glucose starvation","type":"exact"},{"name":"growth defect, required for stationary phase upon glucose starvation","type":"related"},{"name":"loss of cell population viability in stationary phase upon glucose starvation","type":"exact"},{"name":"loss of viability in stationary phase during glucose starvation","type":"exact"},{"name":"reduced viability in stationary phase upon glucose starvation","type":"exact"}],"termid":"FYPO:0005231","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: PBO:0110172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Sls1","termid":"PBO:0110172"}


id: GO:1905125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GO_REF:0000059","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucosylceramidase activity (obsolete GO:1905125)","synonyms":[{"name":"activation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"narrow"},{"name":"activation of GlcCer-beta-glucosidase activity","type":"narrow"},{"name":"activation of acid beta-glucosidase activity","type":"narrow"},{"name":"activation of beta-D-glucocerebrosidase activity","type":"narrow"},{"name":"activation of beta-glucocerebrosidase activity","type":"narrow"},{"name":"activation of beta-glucosylceramidase activity","type":"narrow"},{"name":"activation of ceramide glucosidase activity","type":"narrow"},{"name":"activation of glucocerebrosidase activity","type":"narrow"},{"name":"activation of glucosphingosine glucosylhydrolase activity","type":"narrow"},{"name":"activation of glucosylceramidase activity","type":"narrow"},{"name":"activation of glucosylcerebrosidase activity","type":"narrow"},{"name":"activation of glucosylsphingosine beta-D-glucosidase activity","type":"narrow"},{"name":"activation of glucosylsphingosine beta-glucosidase activity","type":"narrow"},{"name":"activation of psychosine hydrolase activity","type":"narrow"},{"name":"positive regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"positive regulation of GCase activity","type":"exact"},{"name":"positive regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"positive regulation of acid beta-glucosidase activity","type":"exact"},{"name":"positive regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"positive regulation of ceramide glucosidase activity","type":"exact"},{"name":"positive regulation of glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"positive regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"positive regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"positive regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"positive regulation of psychosine hydrolase activity","type":"exact"},{"name":"up regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"up regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"up regulation of acid beta-glucosidase activity","type":"exact"},{"name":"up regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"up regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"up regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"up regulation of ceramide glucosidase activity","type":"exact"},{"name":"up regulation of glucocerebrosidase activity","type":"exact"},{"name":"up regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"up regulation of glucosylceramidase activity","type":"exact"},{"name":"up regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"up regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"up regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"up regulation of psychosine hydrolase activity","type":"exact"},{"name":"up-regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"up-regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"up-regulation of acid beta-glucosidase activity","type":"exact"},{"name":"up-regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"up-regulation of ceramide glucosidase activity","type":"exact"},{"name":"up-regulation of glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"up-regulation of glucosylceramidase activity","type":"exact"},{"name":"up-regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"up-regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"up-regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"up-regulation of psychosine hydrolase activity","type":"exact"},{"name":"upregulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"upregulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"upregulation of acid beta-glucosidase activity","type":"exact"},{"name":"upregulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"upregulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"upregulation of beta-glucosylceramidase activity","type":"exact"},{"name":"upregulation of ceramide glucosidase activity","type":"exact"},{"name":"upregulation of glucocerebrosidase activity","type":"exact"},{"name":"upregulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"upregulation of glucosylceramidase activity","type":"exact"},{"name":"upregulation of glucosylcerebrosidase activity","type":"exact"},{"name":"upregulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"upregulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"upregulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905125"}


id: PBO:0111444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd1","termid":"PBO:0111444"}


id: PBO:0077302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 41B","termid":"PBO:0077302"}


id: PBO:0038278
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0038278"}


id: GO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid.","definition_xrefs":["GOC:rl","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase inhibitor activity","termid":"GO:0055102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"phospholipase inhibitor activity","termid":"GO:0004859"}


id: GO:0032364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of oxygen within a cell.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular oxygen homeostasis","synonyms":[{"name":"cellular oxygen homeostasis","type":"exact"},{"name":"oxygen homeostasis","type":"broad"}],"termid":"GO:0032364"}


id: PR:Q9USW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.02","synonyms":[{"name":"Spom972h-SPBC21B10.02","type":"exact"}],"termid":"PR:Q9USW0"}


id: FYPO:0007383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:22825872","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to kinetochore during vegetative growth","termid":"FYPO:0001269"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"abolished protein localisation to kinetochore during mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"abolished protein localization to kinetochore during mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"abolished protein localization to kinetochore during signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"abolished protein localization to kinetochore during spindle assembly checkpoint signaling during mitotic cell cycle","type":"exact"},{"name":"abolished protein recruitment to unattached kinetochores","type":"exact"},{"name":"protein localization to kinetochore during mitotic spindle assembly checkpoint signaling abolished","type":"exact"}],"termid":"FYPO:0007383"}


id: PBO:0062967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 10","termid":"PBO:0062967"}


id: SO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene suspected of being involved in the expression of a trait.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate_gene","synonyms":[{"name":"candidate gene","type":"exact"},{"name":"target gene","type":"exact"}],"termid":"SO:0001867"}


id: PBO:0040507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL9 cell migration associated","termid":"PBO:0040507"}


id: PBO:0065100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR1B antisense RNA 1","termid":"PBO:0065100"}


id: FYPO:0001088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased glucosyltransferase activity","synonyms":[{"name":"reduced glucosyltransferase activity","type":"exact"}],"termid":"FYPO:0001088"}


id: PR:Q9P785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C1711.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.05","secondary_identifiers":["UniProtKB:Q9P785"],"synonyms":[{"name":"Spom972h-MUC7","type":"exact"}],"termid":"PR:Q9P785"}


id: GO:0003074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate of diuresis. Diuresis is the process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of diuresis (obsolete GO:0003074)","synonyms":[{"name":"regulation of diuresis","type":"exact"}],"termid":"GO:0003074"}


id: PBO:0045386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 8","termid":"PBO:0045386"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["GOC:krc","PMID:14755521","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: GO:0044814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic fermentation beginning with the anaerobic conversion of glucose to pyruvate by the glycolytic pathway, followed by pyruvate:formate lyase (PFL) activity. This pathway is found in facultative anaerobes such as E. coli.","definition_xrefs":["GOC:mengo_curators","PMID:20395274","PMID:20692761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation via PFL pathway","termid":"GO:0044814"}


id: PBO:0042304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD19 molecule","termid":"PBO:0042304"}


id: GO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075335)","termid":"GO:0075335"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_01530","SJAG_03025","SJAG_04187","SJAG_02624","SJAG_03345","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[89117,89118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[85855,100757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[114651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170060"},{"annotations":[109294,93099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:23727094","PMID:29779865","PMID:34836783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_02624":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null,"GO:0170060":null}}


id: PR:O00087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyl dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.09c","secondary_identifiers":["UniProtKB:O00087"],"synonyms":[{"name":"DLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLD","type":"exact"},{"name":"dihydrolipoamide dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00087"}


id: PBO:0068934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 177, pseudogene","termid":"PBO:0068934"}


id: PBO:0054872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2286","termid":"PBO:0054872"}


id: PBO:0059333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 2","termid":"PBO:0059333"}


id: PBO:0029188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_exocytic_vesicles_present_in_increased_numbers","termid":"PBO:0029188"}


id: PBO:0048295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 2","termid":"PBO:0048295"}


id: PBO:0072883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF1 pseudogene 2","termid":"PBO:0072883"}


id: PBO:0079421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 4","termid":"PBO:0079421"}


id: PBO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.25","termid":"PBO:0002643"}


id: MOD:00312
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-myristoyl-L-cysteine.","definition_xrefs":["PubMed:10080938","RESID:AA0307","Unimod:45#C","PubMed:8824274","PubMed:10026218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-myristoylated residue","termid":"MOD:00655"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-myristoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(tetradecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"LIPID S-myristoyl cysteine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"S-(C14:1 aliphatic acyl)cysteine","type":"exact"},{"name":"S-myristoyl-L-cysteine","type":"exact"},{"name":"S-myristoylated L-cysteine","type":"exact"},{"name":"SMyrCys","type":"exact"},{"name":"tetradecanoate cysteine thioester","type":"exact"}],"termid":"MOD:00312"}


id: PBO:0082802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0082802"}


id: FYPO:0002947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall","termid":"FYPO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall morphology","synonyms":[{"name":"cell wall morphology: abnormal","type":"related"}],"termid":"FYPO:0002947"}


id: GO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of cardiac atrium muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue morphogenesis","synonyms":[{"name":"atrial heart muscle morphogenesis","type":"exact"},{"name":"atrial myocardium morphogenesis","type":"exact"},{"name":"cardiac atrium muscle morphogenesis","type":"exact"}],"termid":"GO:0055009"}


id: FYPO:0006630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, elongated, has no septum, and contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002024"},{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated tetranucleate aseptate vegetative cell","synonyms":[{"name":"elongated tetranucleate aseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated tetranucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated tetranucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated tetranucleate aseptate vegetative cell","type":"exact"}],"termid":"FYPO:0006630"}


id: PBO:0004069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin Dnm1","termid":"PBO:0004069"}


id: GO:2001241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001238"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:2001239"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"positive regulation of dependence receptor signaling pathway","type":"related"},{"name":"positive regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001241"}


id: PBO:0090401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42","termid":"PBO:0090401"}


id: GO:1902297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA unwinding that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA unwinding involved in DNA replication","termid":"GO:0006268"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"cell cycle DNA replication DNA unwinding","synonyms":[{"name":"DNA unwinding during replication involved in cell cycle DNA replication","type":"related"},{"name":"DNA unwinding factor involved in cell cycle DNA replication","type":"related"},{"name":"DNA unwinding involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902297"}


id: FYPO:0006428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite poles of the mitotic spindle during metaphase plate congression is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic sister chromatid biorientation","synonyms":[{"name":"normal sister chromatid biorientation during mitosis","type":"exact"},{"name":"normal sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"normal sister chromatid biorientation during vegetative growth","type":"exact"}],"termid":"FYPO:0006428"}


id: GO:0043329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of directing proteins towards a membrane using signals contained within the protein, occurring that contributes to ubiquitin-dependent protein catabolism via the MVB pathway; the destruction of a protein or peptide covalently tagged with a ubiquitin, via the multivesicular body (MVB) sorting pathway.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein targeting to membrane involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (obsolete GO:0043329)","synonyms":[{"name":"protein membrane targeting during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"protein membrane targeting during ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"protein targeting to membrane during ubiquitin-dependent protein breakdown via the MVB pathway","type":"exact"},{"name":"protein targeting to membrane during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"related"},{"name":"protein targeting to membrane during ubiquitin-dependent protein degradation via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein breakdown via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein degradation via the MVB pathway","type":"exact"}],"termid":"GO:0043329"}


id: PBO:0031049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_modification","termid":"PBO:0031049"}


id: SO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A left handed helix is a region of peptide where the coiled conformation turns in an anticlockwise, left handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"left_handed_peptide_helix","secondary_identifiers":["BS:00222"],"synonyms":[{"name":"helix-l","type":"related"},{"name":"left handed helix","type":"exact"}],"termid":"SO:0001115"}


id: PBO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase","termid":"PBO:0002014"}


id: GO:1901277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tartrate.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00839","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tartrate metabolic process","termid":"GO:1901275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate biosynthetic process","synonyms":[{"name":"tartrate formation","type":"exact"},{"name":"tartrate synthesis","type":"exact"},{"name":"tartrate biosynthesis","type":"exact"},{"name":"tartrate anabolism","type":"exact"}],"termid":"GO:1901277"}


id: PBO:0084627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylesterase performing penultimate step of diphthamide biosynthesis; hydrolyzes methylated diphthine to produce diphthine and allows Dph6-catalyzed amidation reaction to occur; deletion leads to resistance to sordarin and accumulation of methylatediphthine; WD40 domain-containing protein; involved in endosomal recycling; forms complex with Rtt10p that functions in retromer-mediated pathway for recycling internalized cell-surface proteins","termid":"PBO:0084627"}


id: PBO:0030948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_fission","termid":"PBO:0030948"}


id: PBO:0030329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphoinositide_level","termid":"PBO:0030329"}


id: GO:1904075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["PMID:24508636","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of trophectodermal cell proliferation","termid":"GO:1904073"},{"relation_name":"positively_regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophectodermal cell proliferation","synonyms":[{"name":"activation of trophectoderm cell proliferation","type":"narrow"},{"name":"activation of trophectodermal cell proliferation","type":"narrow"},{"name":"positive regulation of trophectoderm cell proliferation","type":"exact"},{"name":"up regulation of trophectoderm cell proliferation","type":"exact"},{"name":"up regulation of trophectodermal cell proliferation","type":"exact"},{"name":"up-regulation of trophectoderm cell proliferation","type":"exact"},{"name":"up-regulation of trophectodermal cell proliferation","type":"exact"},{"name":"upregulation of trophectoderm cell proliferation","type":"exact"},{"name":"upregulation of trophectodermal cell proliferation","type":"exact"}],"termid":"GO:1904075"}


id: SO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a histone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone_binding_site","synonyms":[{"name":"histone binding site","type":"exact"}],"termid":"SO:0001383"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:sart","PMID:20080302","PMID:30280653","GOC:aruk","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: GO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:15771591","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class I","type":"exact"},{"name":"antigen presentation, exogenous antigen via major histocompatibility complex class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross priming","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"cross-priming","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0042590"}


id: GO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"anaerobic rhamnose catabolic process","synonyms":[{"name":"anaerobic rhamnose breakdown","type":"exact"},{"name":"anaerobic rhamnose catabolism","type":"exact"},{"name":"anaerobic rhamnose degradation","type":"exact"}],"termid":"GO:0019304"}


