# genes

id: SJAG_03241
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86049],"is_not":false,"summary":null,"term":"GO:0060963"},{"annotations":[86050],"is_not":false,"summary":null,"term":"GO:0090070"}],"cellular_component":[{"annotations":[86047],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86048],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[86051],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[86052],"is_not":false,"summary":null,"term":"GO:0000978"}]},"dbxrefs":["InterPro:IPR036236","GOA:B6K3Q1","UniProtKB/TrEMBL:B6K3Q1","EnsemblGenomes-Gn:SJAG_03241","EnsemblGenomes-Tr:EEB08108","InterPro:IPR013087"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":154,"start":131}},{"range":{"end":332,"start":288}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dus2","uniquename":"SJAG_03236"},{"name":"sks2","uniquename":"SJAG_03237"},{"name":"cyp3","uniquename":"SJAG_03238"},{"name":"vps3844","uniquename":"SJAG_03239"},{"name":"dus3","uniquename":"SJAG_03240"},{"name":"sfp1","uniquename":"SJAG_03241"},{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"}],"genes_by_uniquename":{"HGNC:28917":null,"SJAG_03241":null,"SPAC16.05c":null,"YLR403W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PATTERNS","description":"Zinc finger C2H2 type domain signature.","id":"PS00028","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":391,"start":368},{"end":438,"start":417}],"match_end":438,"match_start":368,"name":"ZINC_FINGER_C2H2_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":391,"start":366},{"end":438,"start":415}],"match_end":438,"match_start":366,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"SMART","id":"SM00355","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":391,"start":366},{"end":438,"start":415}],"match_end":438,"match_start":366,"name":"c2h2final6"},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":434,"start":364}],"match_end":434,"match_start":364,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":444,"start":336}],"match_end":444,"match_start":336,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR23057","interpro_description":"Zinc finger and chromatin remodeling-associated protein","interpro_id":"IPR051580","interpro_name":"ZnF-Chromatin_assoc","locations":[{"end":453,"start":56}],"match_end":453,"match_start":56,"name":"JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":154,"start":131},{"end":332,"start":288}],"match_end":332,"match_start":131,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":150,"start":132}],"match_end":150,"match_start":132,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":318,"start":295}],"match_end":318,"match_start":295,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":701919,"start_pos":700522,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":55,"start":18}},{"range":{"end":149,"start":131}},{"range":{"end":221,"start":204}},{"range":{"end":403,"start":393}}],"name":"sfp1","ortholog_annotations":[{"gene_uniquename":"SJAG_03241","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28917","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03241","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03241","ortholog_taxonid":4932,"ortholog_uniquename":"YLR403W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor for ribosome biogenesis Sfp1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0000978"],"NOT binding":["GO:0001228"]}},"subset_termids":["GO:0006355","GO:0042254","GO:0003700","GO:0006351","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0001228":null,"GO:0005634":null,"GO:0005829":null,"GO:0060963":null,"GO:0090070":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03241.1"],"transcripts_by_uniquename":{"SJAG_03241.1":null},"uniprot_identifier":"B6K3Q1","uniquename":"SJAG_03241"}


id: SJAG_03243
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97379],"is_not":false,"summary":null,"term":"GO:0009098"}],"cellular_component":[{"annotations":[97378],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[97380],"is_not":false,"summary":null,"term":"GO:0003861"},{"annotations":[97381],"is_not":false,"summary":null,"term":"GO:0051539"}]},"dbxrefs":["InterPro:IPR012235","InterPro:IPR004430","EnsemblGenomes-Gn:SJAG_03243","InterPro:IPR015931","InterPro:IPR033940","InterPro:IPR015928","GOA:B6K3Q2","UniProtKB/TrEMBL:B6K3Q2","InterPro:IPR036008","InterPro:IPR018136","EnsemblGenomes-Tr:EEB08109","InterPro:IPR001030","InterPro:IPR004431","InterPro:IPR000573","InterPro:IPR033941"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sks2","uniquename":"SJAG_03237"},{"name":"cyp3","uniquename":"SJAG_03238"},{"name":"vps3844","uniquename":"SJAG_03239"},{"name":"dus3","uniquename":"SJAG_03240"},{"name":"sfp1","uniquename":"SJAG_03241"},{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"}],"genes_by_uniquename":{"SJAG_03243":null,"SPAC9E9.03":null,"YGL009C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aconitase C-terminal domain","id":"PF00694","interpro_description":"Aconitase A/isopropylmalate dehydratase small subunit, swivel domain","interpro_id":"IPR000573","interpro_name":"AconitaseA/IPMdHydase_ssu_swvl","locations":[{"end":654,"start":533}],"match_end":654,"match_start":533,"name":"Aconitase_C"},{"dbname":"PFAM","description":"Aconitase family (aconitate hydratase)","id":"PF00330","interpro_description":"Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain","interpro_id":"IPR001030","interpro_name":"Acoase/IPM_deHydtase_lsu_aba","locations":[{"end":466,"start":9}],"match_end":466,"match_start":9,"name":"Aconitase"},{"dbname":"CDD","description":"IPMI","id":"cd01583","interpro_description":"3-Isopropylmalate dehydratase, catalytic domain","interpro_id":"IPR033941","interpro_name":"IPMI_cat","locations":[{"end":467,"start":31}],"match_end":467,"match_start":31,"name":"IPMI"},{"dbname":"CDD","description":"IPMI_Swivel","id":"cd01577","interpro_description":"3-isopropylmalate dehydratase, swivel domain","interpro_id":"IPR033940","interpro_name":"IPMI_Swivel","locations":[{"end":674,"start":545}],"match_end":674,"match_start":545,"name":"IPMI_Swivel"},{"dbname":"PROSITE_PATTERNS","description":"Aconitase family signature 1.","id":"PS00450","interpro_description":"Aconitase family, 4Fe-4S cluster binding site","interpro_id":"IPR018136","interpro_name":"Aconitase_4Fe-4S_BS","locations":[{"end":363,"start":347}],"match_end":363,"match_start":347,"name":"ACONITASE_1"},{"dbname":"PROSITE_PATTERNS","description":"Aconitase family signature 2.","id":"PS01244","interpro_description":"Aconitase family, 4Fe-4S cluster binding site","interpro_id":"IPR018136","interpro_name":"Aconitase_4Fe-4S_BS","locations":[{"end":421,"start":408}],"match_end":421,"match_start":408,"name":"ACONITASE_2"},{"dbname":"PRINTS","description":"Aconitase family signature","id":"PR00415","interpro_description":"Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain","interpro_id":"IPR001030","interpro_name":"Acoase/IPM_deHydtase_lsu_aba","locations":[{"end":103,"start":90},{"end":124,"start":116},{"end":156,"start":127},{"end":230,"start":203},{"end":308,"start":294},{"end":362,"start":351},{"end":421,"start":408}],"match_end":421,"match_start":90,"name":"ACONITASE"},{"dbname":"FUNFAM","description":"3-isopropylmalate dehydratase large subunit","id":"G3DSA:3.30.499.10:FF:000006","locations":[{"end":294,"start":6}],"match_end":294,"match_start":6},{"dbname":"FUNFAM","description":"3-isopropylmalate dehydratase large subunit","id":"G3DSA:3.30.499.10:FF:000007","locations":[{"end":475,"start":335}],"match_end":475,"match_start":335},{"dbname":"FUNFAM","description":"3-isopropylmalate dehydratase small subunit","id":"G3DSA:3.20.19.10:FF:000003","locations":[{"end":707,"start":531}],"match_end":707,"match_start":531},{"dbname":"SUPERFAMILY","id":"SSF53732","interpro_description":"Aconitase, iron-sulfur domain","interpro_id":"IPR036008","interpro_name":"Aconitase_4Fe-4S_dom","locations":[{"end":493,"start":4}],"match_end":493,"match_start":4,"name":"Aconitase iron-sulfur domain"},{"dbname":"SUPERFAMILY","id":"SSF52016","locations":[{"end":722,"start":531}],"match_end":722,"match_start":531,"name":"LeuD/IlvD-like"},{"dbname":"GENE3D","id":"G3DSA:3.20.19.10","interpro_description":"Aconitase/3-isopropylmalate dehydratase, swivel","interpro_id":"IPR015928","interpro_name":"Aconitase/3IPM_dehydase_swvl","locations":[{"end":703,"start":517}],"match_end":703,"match_start":517,"name":"Aconitase, domain 4"},{"dbname":"GENE3D","id":"G3DSA:3.30.499.10","interpro_description":"Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3","interpro_id":"IPR015931","interpro_name":"Acnase/IPM_dHydase_lsu_aba_1/3","locations":[{"end":294,"start":6},{"end":491,"start":326}],"match_end":491,"match_start":6,"name":"Aconitase, domain 3"},{"dbname":"PANTHER","id":"PTHR43822","interpro_description":"Isopropylmalate dehydratase and related enzymes","interpro_id":"IPR050067","interpro_name":"IPM_dehydratase_rel_enz","locations":[{"end":475,"start":3}],"match_end":475,"match_start":3,"name":"HOMOACONITASE, MITOCHONDRIAL-RELATED"},{"dbname":"PIRSF","id":"PIRSF001418","interpro_description":"3-isopropylmalate dehydratase, fused small/large subunit","interpro_id":"IPR012235","interpro_name":"3-IsopropMal_deHydtase_ssu/lsu","locations":[{"end":752,"start":2}],"match_end":752,"match_start":2,"name":"ACN"},{"dbname":"HAMAP","description":"3-isopropylmalate dehydratase small subunit [leuD].","id":"MF_01031","interpro_description":"3-isopropylmalate dehydratase, small subunit","interpro_id":"IPR004431","interpro_name":"3-IsopropMal_deHydase_ssu","locations":[{"end":729,"start":532}],"match_end":729,"match_start":532,"name":"LeuD_type1"},{"dbname":"HAMAP","description":"3-isopropylmalate dehydratase large subunit [leuC].","id":"MF_01026","interpro_description":"3-isopropylmalate dehydratase, large subunit","interpro_id":"IPR004430","interpro_name":"3-IsopropMal_deHydase_lsu","locations":[{"end":475,"start":3}],"match_end":475,"match_start":3,"name":"LeuC_type1"},{"dbname":"NCBIFAM","description":"3-isopropylmalate dehydratase large subunit","id":"TIGR00170","interpro_description":"3-isopropylmalate dehydratase, large subunit","interpro_id":"IPR004430","interpro_name":"3-IsopropMal_deHydase_lsu","locations":[{"end":473,"start":4}],"match_end":473,"match_start":4,"name":"leuC"},{"dbname":"NCBIFAM","description":"3-isopropylmalate dehydratase small subunit","id":"TIGR00171","interpro_description":"3-isopropylmalate dehydratase, small subunit","interpro_id":"IPR004431","interpro_name":"3-IsopropMal_deHydase_ssu","locations":[{"end":715,"start":535}],"match_end":715,"match_start":535,"name":"leuD"}],"location":{"chromosome_name":"supercont5.2","end_pos":705813,"start_pos":703555,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":208,"start":194}},{"range":{"end":292,"start":281}},{"range":{"end":462,"start":456}}],"name":"leu2","ortholog_annotations":[{"gene_uniquename":"SJAG_03243","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03243","ortholog_taxonid":4932,"ortholog_uniquename":"YGL009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03243","ortholog_taxonid":4932,"ortholog_uniquename":"YGL009C","reference_uniquename":"PMID:26896847"}],"product":"3-isopropylmalate dehydratase Leu2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0051539"],"NOT binding":["GO:0003861"]}},"subset_termids":["GO:0006520","GO:0016829","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003861":null,"GO:0005829":null,"GO:0009098":null,"GO:0051539":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03243.1"],"transcripts_by_uniquename":{"SJAG_03243.1":null},"uniprot_identifier":"B6K3Q2","uniquename":"SJAG_03243"}


id: SJAG_03244
data:
  {"coiled_coil_coords":[{"range":{"end":181,"start":154}}],"cv_annotations":{"biological_process":[{"annotations":[97384],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[97385],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[97386],"is_not":false,"summary":null,"term":"GO:0070973"}],"cellular_component":[{"annotations":[97382],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[97383],"is_not":false,"summary":null,"term":"GO:0005789"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03244","EnsemblGenomes-Tr:EEB08110","InterPro:IPR040463","UniProtKB/TrEMBL:B6K3Q3","GOA:B6K3Q3","InterPro:IPR008417"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cyp3","uniquename":"SJAG_03238"},{"name":"vps3844","uniquename":"SJAG_03239"},{"name":"dus3","uniquename":"SJAG_03240"},{"name":"sfp1","uniquename":"SJAG_03241"},{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"}],"genes_by_uniquename":{"HGNC:16695":null,"HGNC:24131":null,"SJAG_03244":null,"SPAC9E9.04":null,"YDL072C":null,"YKL065C":null,"YMR040W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Bap31/Bap29 transmembrane region","id":"PF05529","interpro_description":"BAP29/BAP31, transmembrane domain","interpro_id":"IPR040463","interpro_name":"BAP29/BAP31_N","locations":[{"end":135,"start":1}],"match_end":135,"match_start":1,"name":"Bap31"},{"dbname":"PANTHER","id":"PTHR12701","interpro_description":"B-cell receptor-associated protein 29/31","interpro_id":"IPR008417","interpro_name":"BAP29/BAP31","locations":[{"end":180,"start":1}],"match_end":180,"match_start":1,"name":"BCR-ASSOCIATED PROTEIN, BAP"},{"dbname":"COILS","id":"Coil","locations":[{"end":181,"start":154}],"match_end":181,"match_start":154,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":706926,"start_pos":706360,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":30,"start":15}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03244","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16695","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03244","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24131","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03244","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03244","ortholog_taxonid":4932,"ortholog_uniquename":"YDL072C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03244","ortholog_taxonid":4932,"ortholog_uniquename":"YKL065C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03244","ortholog_taxonid":4932,"ortholog_uniquename":"YMR040W","reference_uniquename":"PMID:29761456"}],"product":"bcap family homolog, vesicle-mediated transport factor","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005789","GO:0016192","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005789":null,"GO:0006886":null,"GO:0006888":null,"GO:0070973":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":26,"start":7}},{"assigned_by":"TMHMM","range":{"end":63,"start":41}},{"assigned_by":"TMHMM","range":{"end":122,"start":103}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03244.1"],"transcripts_by_uniquename":{"SJAG_03244.1":null},"uniprot_identifier":"B6K3Q3","uniquename":"SJAG_03244"}


id: SJAG_03245
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90741],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[90737],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90738],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[90739],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[90740],"is_not":false,"summary":null,"term":"GO:0005686"}]},"dbxrefs":["GOA:B6K3Q4","InterPro:IPR005345","UniProtKB/TrEMBL:B6K3Q4","EnsemblGenomes-Tr:EEB08111","EnsemblGenomes-Gn:SJAG_03245"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps3844","uniquename":"SJAG_03239"},{"name":"dus3","uniquename":"SJAG_03240"},{"name":"sfp1","uniquename":"SJAG_03241"},{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"}],"genes_by_uniquename":{"HGNC:18000":null,"SJAG_03245":null,"SPAC23H3.02c":null,"YPR094W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PHF5-like protein","id":"PF03660","interpro_description":"PHF5-like","interpro_id":"IPR005345","interpro_name":"PHF5","locations":[{"end":104,"start":1}],"match_end":104,"match_start":1,"name":"PHF5"},{"dbname":"PANTHER","id":"PTHR13120","interpro_description":"PHF5-like","interpro_id":"IPR005345","interpro_name":"PHF5","locations":[{"end":106,"start":1}],"match_end":106,"match_start":1,"name":"PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A"},{"dbname":"PIRSF","id":"PIRSF016468","interpro_description":"PHF5-like","interpro_id":"IPR005345","interpro_name":"PHF5","locations":[{"end":111,"start":1}],"match_end":111,"match_start":1,"name":"RDS3p"}],"location":{"chromosome_name":"supercont5.2","end_pos":707848,"start_pos":707250,"strand":"forward"},"name":"ini1","ortholog_annotations":[{"gene_uniquename":"SJAG_03245","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18000","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03245","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H3.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03245","ortholog_taxonid":4932,"ortholog_uniquename":"YPR094W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03245","ortholog_taxonid":4932,"ortholog_uniquename":"YPR094W","reference_uniquename":"PMID:26896847"}],"product":"RING finger-like protein Ini1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0016071","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005686":null,"GO:0005829":null,"GO:0045292":null,"GO:0071011":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03245.1"],"transcripts_by_uniquename":{"SJAG_03245.1":null},"uniprot_identifier":"B6K3Q4","uniquename":"SJAG_03245"}


id: SJAG_03246
data:
  {"coiled_coil_coords":[{"range":{"end":945,"start":925}}],"cv_annotations":{"biological_process":[{"annotations":[88055],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[88056],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[88052],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[88053],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[88054],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[88057],"is_not":false,"summary":null,"term":"GO:0005085"},{"annotations":[88058],"is_not":false,"summary":null,"term":"GO:0008289"}]},"dbxrefs":["InterPro:IPR000904","InterPro:IPR023394","UniProtKB/TrEMBL:B6K3Q5","EnsemblGenomes-Gn:SJAG_03246","InterPro:IPR041681","EnsemblGenomes-Tr:EEB08112","InterPro:IPR035999","GOA:B6K3Q5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":111,"start":1}},{"range":{"end":328,"start":250}},{"range":{"end":1009,"start":970}},{"range":{"end":1147,"start":1112}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dus3","uniquename":"SJAG_03240"},{"name":"sfp1","uniquename":"SJAG_03241"},{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"}],"genes_by_uniquename":{"HGNC:16500":null,"SJAG_03246":null,"SPAC19A8.01c":null,"YPR095C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec7 domain","id":"PF01369","interpro_description":"Sec7 domain","interpro_id":"IPR000904","interpro_name":"Sec7_dom","locations":[{"end":533,"start":406}],"match_end":533,"match_start":406,"name":"Sec7"},{"dbname":"PROSITE_PROFILES","description":"SEC7 domain profile.","id":"PS50190","interpro_description":"Sec7 domain","interpro_id":"IPR000904","interpro_name":"Sec7_dom","locations":[{"end":544,"start":322}],"match_end":544,"match_start":322,"name":"SEC7"},{"dbname":"SMART","id":"SM00222","interpro_description":"Sec7 domain","interpro_id":"IPR000904","interpro_name":"Sec7_dom","locations":[{"end":534,"start":201}],"match_end":534,"match_start":201,"name":"sec7_5"},{"dbname":"FUNFAM","description":"Cytohesin 1","id":"G3DSA:1.10.1000.11:FF:000002","locations":[{"end":548,"start":430}],"match_end":548,"match_start":430},{"dbname":"SUPERFAMILY","id":"SSF48425","interpro_description":"Sec7 domain superfamily","interpro_id":"IPR035999","interpro_name":"Sec7_dom_sf","locations":[{"end":539,"start":382}],"match_end":539,"match_start":382,"name":"Sec7 domain"},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":812,"start":753}],"match_end":812,"match_start":753,"name":"PH domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":696,"start":652},{"end":815,"start":749}],"match_end":815,"match_start":652},{"dbname":"GENE3D","id":"G3DSA:1.10.1000.11","interpro_description":"Sec7, C-terminal domain superfamily","interpro_id":"IPR023394","interpro_name":"Sec7_C_sf","locations":[{"end":540,"start":429}],"match_end":540,"match_start":429},{"dbname":"PANTHER","id":"PTHR10663","locations":[{"end":837,"start":17}],"match_end":837,"match_start":17,"name":"GUANYL-NUCLEOTIDE EXCHANGE FACTOR"},{"dbname":"COILS","id":"Coil","locations":[{"end":945,"start":925}],"match_end":945,"match_start":925,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":111,"start":1},{"end":328,"start":250},{"end":1009,"start":970},{"end":1147,"start":1112}],"match_end":1147,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":50,"start":40},{"end":298,"start":285},{"end":989,"start":977}],"match_end":989,"match_start":40,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":13,"start":1},{"end":309,"start":299}],"match_end":309,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":70,"start":51},{"end":272,"start":259}],"match_end":272,"match_start":51,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":83,"start":71}],"match_end":83,"match_start":71,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":711848,"start_pos":708351,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":67,"start":39}},{"range":{"end":265,"start":253}},{"range":{"end":297,"start":284}},{"range":{"end":549,"start":536}},{"range":{"end":995,"start":976}},{"range":{"end":1062,"start":1052}},{"range":{"end":1141,"start":1131}}],"name":"sec73","ortholog_annotations":[{"gene_uniquename":"SJAG_03246","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16500","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03246","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03246","ortholog_taxonid":4932,"ortholog_uniquename":"YPR095C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03246","ortholog_taxonid":4932,"ortholog_uniquename":"YPR095C","reference_uniquename":"PMID:26896847"}],"product":"ArfGEF Sec73","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0008289"],"NOT binding":["GO:0005085"]}},"subset_termids":["GO:0030234","GO:0008289","GO:0005829","GO:0098772","GO:0005085","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005085":null,"GO:0005829":null,"GO:0006886":null,"GO:0006887":null,"GO:0008289":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03246.1"],"transcripts_by_uniquename":{"SJAG_03246.1":null},"uniprot_identifier":"B6K3Q5","uniquename":"SJAG_03246"}


id: SJAG_03247
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88062],"is_not":false,"summary":null,"term":"GO:0061817"}],"cellular_component":[{"annotations":[88059],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[88060],"is_not":false,"summary":null,"term":"GO:0140268"},{"annotations":[88061],"is_not":false,"summary":null,"term":"GO:0016328"}],"molecular_function":[{"annotations":[88063],"is_not":false,"summary":null,"term":"GO:0008289"}]},"dbxrefs":["InterPro:IPR027267","EnsemblGenomes-Gn:SJAG_03247","EnsemblGenomes-Tr:EEB08113","InterPro:IPR011993","InterPro:IPR042067","InterPro:IPR039463","UniProtKB/TrEMBL:B6K3Q6","InterPro:IPR001849","GOA:B6K3Q6","InterPro:IPR031968"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sfp1","uniquename":"SJAG_03241"},{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"}],"genes_by_uniquename":{"HGNC:18242":null,"HGNC:24035":null,"SJAG_03247":null,"SPAC19A8.02":null,"YHR155W":null,"YNL257C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PH domain","id":"PF00169","interpro_description":"Pleckstrin homology domain","interpro_id":"IPR001849","interpro_name":"PH_domain","locations":[{"end":376,"start":285}],"match_end":376,"match_start":285,"name":"PH"},{"dbname":"PFAM","description":"VAD1 Analog of StAR-related lipid transfer domain","id":"PF16016","interpro_description":"VASt domain","interpro_id":"IPR031968","interpro_name":"VASt","locations":[{"end":917,"start":770}],"match_end":917,"match_start":770,"name":"VASt"},{"dbname":"PFAM","description":"BAR domain of APPL family","id":"PF16746","interpro_description":"BAR domain","interpro_id":"IPR004148","interpro_name":"BAR_dom","locations":[{"end":207,"start":12}],"match_end":207,"match_start":12,"name":"BAR_3"},{"dbname":"CDD","description":"PH_SIP3","id":"cd13280","interpro_description":"Sip3, PH domain","interpro_id":"IPR042067","interpro_name":"Sip3_PH","locations":[{"end":387,"start":285}],"match_end":387,"match_start":285,"name":"PH_SIP3"},{"dbname":"CDD","description":"BAR_SIP3_fungi","id":"cd07609","interpro_description":"Sip3/Lam1, BAR domain","interpro_id":"IPR039463","interpro_name":"Sip3/Lam1_BAR","locations":[{"end":243,"start":25}],"match_end":243,"match_start":25,"name":"BAR_SIP3_fungi"},{"dbname":"PROSITE_PROFILES","description":"VASt domain profile.","id":"PS51778","interpro_description":"VASt domain","interpro_id":"IPR031968","interpro_name":"VASt","locations":[{"end":938,"start":765}],"match_end":938,"match_start":765,"name":"VAST"},{"dbname":"PROSITE_PROFILES","description":"PH domain profile.","id":"PS50003","interpro_description":"Pleckstrin homology domain","interpro_id":"IPR001849","interpro_name":"PH_domain","locations":[{"end":383,"start":283}],"match_end":383,"match_start":283,"name":"PH_DOMAIN"},{"dbname":"SMART","id":"SM00233","interpro_description":"Pleckstrin homology domain","interpro_id":"IPR001849","interpro_name":"PH_domain","locations":[{"end":385,"start":284}],"match_end":385,"match_start":284,"name":"PH_update"},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":380,"start":285}],"match_end":380,"match_start":285,"name":"PH domain-like"},{"dbname":"SUPERFAMILY","id":"SSF103657","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":251,"start":10},{"end":310,"start":281}],"match_end":310,"match_start":10,"name":"BAR/IMD domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":388,"start":274}],"match_end":388,"match_start":274},{"dbname":"GENE3D","id":"G3DSA:1.20.1270.60","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":257,"start":6}],"match_end":257,"match_start":6,"name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"PANTHER","id":"PTHR14248","locations":[{"end":1125,"start":16}],"match_end":1125,"match_start":16,"name":"CYCLIN Y, ISOFORM A"}],"location":{"chromosome_name":"supercont5.2","end_pos":717156,"start_pos":713263,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":555,"start":539}}],"name":"ltc2","ortholog_annotations":[{"gene_uniquename":"SJAG_03247","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18242","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03247","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24035","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03247","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03247","ortholog_taxonid":4932,"ortholog_uniquename":"YHR155W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03247","ortholog_taxonid":4932,"ortholog_uniquename":"YHR155W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03247","ortholog_taxonid":4932,"ortholog_uniquename":"YNL257C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03247","ortholog_taxonid":4932,"ortholog_uniquename":"YNL257C","reference_uniquename":"PMID:26896847"}],"product":"ER-plasma membrane tethering protein Ltc2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0008289"]}},"subset_termids":["GO:0005783","GO:0008289","GO:0005886","GO:0005938","GO:0140056"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0008289":null,"GO:0016328":null,"GO:0032541":null,"GO:0061817":null,"GO:0140268":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":1032,"start":1010}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03247.1"],"transcripts_by_uniquename":{"SJAG_03247.1":null},"uniprot_identifier":"B6K3Q6","uniquename":"SJAG_03247"}


id: SJAG_03248
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88067],"is_not":false,"summary":null,"term":"GO:0035556"}],"cellular_component":[{"annotations":[88064],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[88065],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[64975],"is_not":false,"summary":null,"term":"GO:0012505"},{"annotations":[88066],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[88068],"is_not":false,"summary":null,"term":"GO:0004438"}]},"dbxrefs":["InterPro:IPR000387","InterPro:IPR010569","EnsemblGenomes-Tr:EEB08114","GOA:B6K3Q7","InterPro:IPR016130","InterPro:IPR029021","EnsemblGenomes-Gn:SJAG_03248","InterPro:IPR030564","UniProtKB/TrEMBL:B6K3Q7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"leu2","uniquename":"SJAG_03243"},{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"}],"genes_by_uniquename":{"HGNC:14596":null,"HGNC:16825":null,"HGNC:7448":null,"HGNC:7449":null,"HGNC:7450":null,"HGNC:7453":null,"HGNC:7454":null,"SJAG_03248":null,"SPAC19A8.03":null,"YJR110W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Myotubularin-like phosphatase domain","id":"PF06602","interpro_description":"Myotubularin-like, phosphatase domain","interpro_id":"IPR010569","interpro_name":"Myotubularin-like_Pase_dom","locations":[{"end":308,"start":27}],"match_end":308,"match_start":27,"name":"Myotub-related"},{"dbname":"PROSITE_PATTERNS","description":"Tyrosine specific protein phosphatases active site.","id":"PS00383","interpro_description":"Protein-tyrosine phosphatase, active site","interpro_id":"IPR016130","interpro_name":"Tyr_Pase_AS","locations":[{"end":170,"start":160}],"match_end":170,"match_start":160,"name":"TYR_PHOSPHATASE_1"},{"dbname":"PROSITE_PROFILES","description":"Tyrosine specific protein phosphatases domain profile.","id":"PS50056","interpro_description":"Tyrosine-specific protein phosphatases domain","interpro_id":"IPR000387","interpro_name":"Tyr_Pase_dom","locations":[{"end":175,"start":131}],"match_end":175,"match_start":131,"name":"TYR_PHOSPHATASE_2"},{"dbname":"PROSITE_PROFILES","description":"Myotubularin phosphatase domain.","id":"PS51339","interpro_description":"Myotubularin-like, phosphatase domain","interpro_id":"IPR010569","interpro_name":"Myotubularin-like_Pase_dom","locations":[{"end":356,"start":1}],"match_end":356,"match_start":1,"name":"PPASE_MYOTUBULARIN"},{"dbname":"SUPERFAMILY","id":"SSF52799","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":216,"start":25},{"end":359,"start":251}],"match_end":359,"match_start":25,"name":"(Phosphotyrosine protein) phosphatases II"},{"dbname":"PANTHER","id":"PTHR10807","interpro_description":"Myotubularin","interpro_id":"IPR030564","interpro_name":"Myotubularin","locations":[{"end":367,"start":28}],"match_end":367,"match_start":28,"name":"MYOTUBULARIN-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":719612,"start_pos":718435,"strand":"forward"},"name":"ymr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14596","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16825","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7448","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7449","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7450","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7453","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7454","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":4932,"ortholog_uniquename":"YJR110W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03248","ortholog_taxonid":4932,"ortholog_uniquename":"YJR110W","reference_uniquename":"PMID:26896847"}],"product":"phosphatidylinositol-3-phosphatase, myotubularin family","references_by_uniquename":{"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004438"]}},"subset_termids":["GO:0023052","GO:0016788","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004438":null,"GO:0005737":null,"GO:0005829":null,"GO:0012505":null,"GO:0016020":null,"GO:0035556":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03248.1"],"transcripts_by_uniquename":{"SJAG_03248.1":null},"uniprot_identifier":"B6K3Q7","uniquename":"SJAG_03248"}


id: SJAG_03249
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88070],"is_not":false,"summary":null,"term":"GO:0006696"}],"cellular_component":[{"annotations":[88069],"is_not":false,"summary":null,"term":"GO:0005783"}],"molecular_function":[{"annotations":[88071],"is_not":false,"summary":null,"term":"GO:0000249"},{"annotations":[88072],"is_not":false,"summary":null,"term":"GO:0020037"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08115","InterPro:IPR001128","UniProtKB/TrEMBL:B6K3Q8","InterPro:IPR036396","EnsemblGenomes-Gn:SJAG_03249","InterPro:IPR002403","InterPro:IPR017972","GOA:B6K3Q8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":566,"start":527}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03244"},{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"}],"genes_by_uniquename":{"HGNC:20577":null,"HGNC:20581":null,"HGNC:2603":null,"SJAG_03249":null,"SPAC19A8.04":null,"YMR015C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome P450","id":"PF00067","interpro_description":"Cytochrome P450","interpro_id":"IPR001128","interpro_name":"Cyt_P450","locations":[{"end":484,"start":54}],"match_end":484,"match_start":54,"name":"p450"},{"dbname":"CDD","description":"CYP61_CYP710","id":"cd11082","locations":[{"end":506,"start":83}],"match_end":506,"match_start":83,"name":"CYP61_CYP710"},{"dbname":"PROSITE_PATTERNS","description":"Cytochrome P450 cysteine heme-iron ligand signature.","id":"PS00086","interpro_description":"Cytochrome P450, conserved site","interpro_id":"IPR017972","interpro_name":"Cyt_P450_CS","locations":[{"end":462,"start":453}],"match_end":462,"match_start":453,"name":"CYTOCHROME_P450"},{"dbname":"PRINTS","description":"P450 superfamily signature","id":"PR00385","interpro_description":"Cytochrome P450","interpro_id":"IPR001128","interpro_name":"Cyt_P450","locations":[{"end":337,"start":320},{"end":386,"start":375},{"end":471,"start":451}],"match_end":471,"match_start":320,"name":"P450"},{"dbname":"PRINTS","description":"E-class P450 group IV signature","id":"PR00465","interpro_description":"Cytochrome P450, E-class, group IV","interpro_id":"IPR002403","interpro_name":"Cyt_P450_E_grp-IV","locations":[{"end":337,"start":311},{"end":386,"start":370},{"end":438,"start":420},{"end":478,"start":444}],"match_end":478,"match_start":311,"name":"EP450IV"},{"dbname":"FUNFAM","description":"Cytochrome P450 61","id":"G3DSA:1.10.630.10:FF:000021","locations":[{"end":513,"start":42}],"match_end":513,"match_start":42},{"dbname":"SUPERFAMILY","id":"SSF48264","interpro_description":"Cytochrome P450 superfamily","interpro_id":"IPR036396","interpro_name":"Cyt_P450_sf","locations":[{"end":511,"start":50}],"match_end":511,"match_start":50,"name":"Cytochrome P450"},{"dbname":"GENE3D","id":"G3DSA:1.10.630.10","interpro_description":"Cytochrome P450 superfamily","interpro_id":"IPR036396","interpro_name":"Cyt_P450_sf","locations":[{"end":511,"start":44}],"match_end":511,"match_start":44,"name":"Cytochrome P450"},{"dbname":"PANTHER","id":"PTHR24286","locations":[{"end":471,"start":53}],"match_end":471,"match_start":53,"name":"CYTOCHROME P450 26"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":566,"start":527}],"match_end":566,"match_start":527,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":566,"start":541}],"match_end":566,"match_start":541,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":540,"start":528}],"match_end":540,"match_start":528,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":722197,"start_pos":720265,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":296,"start":286}},{"range":{"end":535,"start":520}}],"name":"erg5","ortholog_annotations":[{"gene_uniquename":"SJAG_03249","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20577","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03249","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20581","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03249","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2603","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03249","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03249","ortholog_taxonid":4932,"ortholog_uniquename":"YMR015C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03249","ortholog_taxonid":4932,"ortholog_uniquename":"YMR015C","reference_uniquename":"PMID:26896847"}],"product":"C-22 sterol desaturase (cytochrome P450) Erg5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0020037"],"NOT binding":["GO:0000249"]}},"subset_termids":["GO:0016491","GO:0006629","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000249":null,"GO:0005783":null,"GO:0006696":null,"GO:0020037":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":43,"start":21}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03249.1"],"transcripts_by_uniquename":{"SJAG_03249.1":null},"uniprot_identifier":"B6K3Q8","uniquename":"SJAG_03249"}


id: SJAG_03250
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[88078],"is_not":false,"summary":null,"term":"GO:0031321"},{"annotations":[88079],"is_not":false,"summary":null,"term":"GO:0120113"},{"annotations":[72451],"is_not":false,"summary":null,"term":"GO:0032456"},{"annotations":[88080],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[88081],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[88082],"is_not":false,"summary":null,"term":"GO:0043328"},{"annotations":[72450],"is_not":false,"summary":null,"term":"GO:0031623"}],"cellular_component":[{"annotations":[88073],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72449],"is_not":false,"summary":null,"term":"GO:0005769"},{"annotations":[60483],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[88074],"is_not":false,"summary":null,"term":"GO:0033565"},{"annotations":[88075],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[88076],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[88077],"is_not":false,"summary":null,"term":"GO:0005628"}],"molecular_function":[{"annotations":[88083],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[88084],"is_not":false,"summary":null,"term":"GO:0032266"},{"annotations":[72448],"is_not":false,"summary":null,"term":"GO:0043130"},{"annotations":[88085],"is_not":false,"summary":null,"term":"GO:0061659"}],"single_locus_phenotype":[{"annotations":[116040],"is_not":false,"summary":null,"term":"FYPO:0001440"},{"annotations":[116034],"is_not":false,"summary":null,"term":"FYPO:0003780"}]},"dbxrefs":["InterPro:IPR011011","InterPro:IPR003903","EnsemblGenomes-Tr:EEB08116","InterPro:IPR002014","InterPro:IPR000306","UniProtKB/TrEMBL:B6K3Q9","InterPro:IPR017455","InterPro:IPR008942","InterPro:IPR013083","InterPro:IPR017073","GOA:B6K3Q9","EnsemblGenomes-Gn:SJAG_03250"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":304,"start":229}},{"range":{"end":390,"start":316}},{"range":{"end":556,"start":482}},{"range":{"end":700,"start":578}}],"feature_publications":[{"reference_uniquename":"PMID:32109380","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ini1","uniquename":"SJAG_03245"},{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"}],"genes_by_uniquename":{"HGNC:11357":null,"HGNC:11358":null,"SJAG_03250":null,"SPAC19A8.05c":null,"YNR006W":null},"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"VHS domain","id":"PF00790","interpro_description":"VHS domain","interpro_id":"IPR002014","interpro_name":"VHS_dom","locations":[{"end":148,"start":7}],"match_end":148,"match_start":7,"name":"VHS"},{"dbname":"PFAM","description":"FYVE zinc finger","id":"PF01363","interpro_description":"FYVE zinc finger","interpro_id":"IPR000306","interpro_name":"Znf_FYVE","locations":[{"end":229,"start":173}],"match_end":229,"match_start":173,"name":"FYVE"},{"dbname":"PFAM","description":"Vacuolar protein sorting-associated protein 27, GAT-like domain","id":"PF21356","interpro_description":"Vacuolar protein sorting-associated protein 27, GAT-like domain","interpro_id":"IPR049425","interpro_name":"Vps27_GAT-like","locations":[{"end":459,"start":394}],"match_end":459,"match_start":394,"name":"Vps27_GAT-like"},{"dbname":"PFAM","description":"Ubiquitin interaction motif","id":"PF02809","interpro_description":"Ubiquitin interacting motif","interpro_id":"IPR003903","interpro_name":"UIM_dom","locations":[{"end":278,"start":263},{"end":318,"start":302}],"match_end":318,"match_start":263,"name":"UIM"},{"dbname":"CDD","description":"VHS_Vps27","id":"cd16979","locations":[{"end":152,"start":9}],"match_end":152,"match_start":9,"name":"VHS_Vps27"},{"dbname":"PROSITE_PROFILES","description":"VHS domain profile.","id":"PS50179","interpro_description":"VHS domain","interpro_id":"IPR002014","interpro_name":"VHS_dom","locations":[{"end":152,"start":20}],"match_end":152,"match_start":20,"name":"VHS"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin-interacting motif (UIM) domain profile.","id":"PS50330","interpro_description":"Ubiquitin interacting motif","interpro_id":"IPR003903","interpro_name":"UIM_dom","locations":[{"end":282,"start":263},{"end":321,"start":302}],"match_end":321,"match_start":263,"name":"UIM"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger FYVE/FYVE-related type profile.","id":"PS50178","interpro_description":"Zinc finger, FYVE-related","interpro_id":"IPR017455","interpro_name":"Znf_FYVE-rel","locations":[{"end":231,"start":171}],"match_end":231,"match_start":171,"name":"ZF_FYVE"},{"dbname":"SMART","id":"SM00288","interpro_description":"VHS domain","interpro_id":"IPR002014","interpro_name":"VHS_dom","locations":[{"end":148,"start":11}],"match_end":148,"match_start":11,"name":"VHS_2"},{"dbname":"SMART","id":"SM00064","interpro_description":"FYVE zinc finger","interpro_id":"IPR000306","interpro_name":"Znf_FYVE","locations":[{"end":232,"start":166}],"match_end":232,"match_start":166,"name":"fyve_4"},{"dbname":"SMART","id":"SM00726","interpro_description":"Ubiquitin interacting motif","interpro_id":"IPR003903","interpro_name":"UIM_dom","locations":[{"end":282,"start":263},{"end":321,"start":302}],"match_end":321,"match_start":263,"name":"uim"},{"dbname":"SUPERFAMILY","id":"SSF48464","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":152,"start":3}],"match_end":152,"match_start":3,"name":"ENTH/VHS domain"},{"dbname":"SUPERFAMILY","id":"SSF57903","interpro_description":"Zinc finger, FYVE/PHD-type","interpro_id":"IPR011011","interpro_name":"Znf_FYVE_PHD","locations":[{"end":233,"start":170}],"match_end":233,"match_start":170,"name":"FYVE/PHD zinc finger"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":233,"start":164}],"match_end":233,"match_start":164,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.90","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":159,"start":5}],"match_end":159,"match_start":5},{"dbname":"GENE3D","id":"G3DSA:6.10.140.100","locations":[{"end":330,"start":256}],"match_end":330,"match_start":256},{"dbname":"GENE3D","id":"G3DSA:1.20.5.1940","locations":[{"end":476,"start":388}],"match_end":476,"match_start":388},{"dbname":"PANTHER","id":"PTHR46275","interpro_description":"Hepatocyte growth factor-regulated tyrosine kinase substrate/VPS27","interpro_id":"IPR017073","interpro_name":"HGS/VPS27","locations":[{"end":688,"start":6}],"match_end":688,"match_start":6,"name":"HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE"},{"dbname":"PIRSF","id":"PIRSF036956","interpro_description":"Hepatocyte growth factor-regulated tyrosine kinase substrate/VPS27","interpro_id":"IPR017073","interpro_name":"HGS/VPS27","locations":[{"end":700,"start":5}],"match_end":700,"match_start":5,"name":"Hrs_Vps27"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":304,"start":229},{"end":390,"start":316},{"end":556,"start":482},{"end":700,"start":578}],"match_end":700,"match_start":229,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":536,"start":510},{"end":646,"start":632},{"end":685,"start":672}],"match_end":685,"match_start":510,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":239,"start":229},{"end":260,"start":250},{"end":299,"start":283},{"end":344,"start":328},{"end":364,"start":355},{"end":599,"start":588},{"end":631,"start":616}],"match_end":631,"match_start":229,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":272,"start":261},{"end":326,"start":317}],"match_end":326,"match_start":261,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":380,"start":365}],"match_end":380,"match_start":365,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":724860,"start_pos":722758,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":174,"start":163}},{"range":{"end":383,"start":366}},{"range":{"end":535,"start":508}},{"range":{"end":645,"start":631}},{"range":{"end":684,"start":671}}],"name":"sst4","ortholog_annotations":[{"gene_uniquename":"SJAG_03250","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11357","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03250","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11358","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03250","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03250","ortholog_taxonid":4932,"ortholog_uniquename":"YNR006W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03250","ortholog_taxonid":4932,"ortholog_uniquename":"YNR006W","reference_uniquename":"PMID:26896847"}],"product":"sorting receptor for ubiquitinated membrane proteins, ESCRT 0 complex subunit Sst4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:32109380":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0046872","GO:0032266","GO:0043130"],"NOT binding":["GO:0061659"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0001440","FYPO:0003780"]}},"subset_termids":["GO:0019787","GO:0030163","GO:0016192","GO:0016746","GO:0140096","FYPO:0001320","GO:0030437","GO:0005773","FYPO:0000138","GO:0031410","GO:0005628","GO:0005634","GO:0005829","GO:0008289","GO:0005768","GO:0006605"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYPO:0001440":null,"FYPO:0003780":null,"FYPO_EXT:0000001":null,"GO:0000329":null,"GO:0000815":null,"GO:0005628":null,"GO:0005634":null,"GO:0005769":null,"GO:0005829":null,"GO:0006897":null,"GO:0010008":null,"GO:0031321":null,"GO:0031623":null,"GO:0032266":null,"GO:0032456":null,"GO:0033565":null,"GO:0043130":null,"GO:0043328":null,"GO:0045324":null,"GO:0046872":null,"GO:0061659":null,"GO:0120113":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03250.1"],"transcripts_by_uniquename":{"SJAG_03250.1":null},"uniprot_identifier":"B6K3Q9","uniquename":"SJAG_03250"}


id: SJAG_03251
data:
  {"coiled_coil_coords":[{"range":{"end":368,"start":348}}],"cv_annotations":{"cellular_component":[{"annotations":[88086],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[88087],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[88088],"is_not":false,"summary":null,"term":"GO:0031965"}],"molecular_function":[{"annotations":[88089],"is_not":false,"summary":null,"term":"GO:0016491"}]},"dbxrefs":["GOA:B6K3R0","EnsemblGenomes-Gn:SJAG_03251","InterPro:IPR002347","InterPro:IPR036291","EnsemblGenomes-Tr:EEB08117","UniProtKB/TrEMBL:B6K3R0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec73","uniquename":"SJAG_03246"},{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"}],"genes_by_uniquename":{"HGNC:19979":null,"SJAG_03251":null,"SPAC19A8.06":null,"YNL181W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"short chain dehydrogenase","id":"PF00106","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":202,"start":56}],"match_end":202,"match_start":56,"name":"adh_short"},{"dbname":"PRINTS","description":"Glucose/ribitol dehydrogenase family signature","id":"PR00081","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":73,"start":56},{"end":275,"start":258}],"match_end":275,"match_start":56,"name":"GDHRDH"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":295,"start":53}],"match_end":295,"match_start":53,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":364,"start":45}],"match_end":364,"match_start":45},{"dbname":"PANTHER","id":"PTHR24320","locations":[{"end":334,"start":43}],"match_end":334,"match_start":43,"name":"RETINOL DEHYDROGENASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":368,"start":348}],"match_end":368,"match_start":348,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":726471,"start_pos":725338,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":53}},{"range":{"end":376,"start":366}}],"name":"pbr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03251","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19979","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03251","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03251","ortholog_taxonid":4932,"ortholog_uniquename":"YNL181W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03251","ortholog_taxonid":4932,"ortholog_uniquename":"YNL181W","reference_uniquename":"PMID:26896847"}],"product":"ER oxidoreductase Pbr1, implicated in lipid metabolism, or protein glycosylation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0016491"]}},"subset_termids":["GO:0016491","GO:0005783","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005783":null,"GO:0016491":null,"GO:0031965":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":301,"start":279}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03251.1"],"transcripts_by_uniquename":{"SJAG_03251.1":null},"uniprot_identifier":"B6K3R0","uniquename":"SJAG_03251"}


id: SJAG_03252
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88094],"is_not":false,"summary":null,"term":"GO:0042274"},{"annotations":[88095],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[88090],"is_not":false,"summary":null,"term":"GO:0034457"},{"annotations":[88091],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[88092],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[88093],"is_not":false,"summary":null,"term":"GO:0032040"}],"molecular_function":[{"annotations":[88096],"is_not":false,"summary":null,"term":"GO:0042134"},{"annotations":[88097],"is_not":false,"summary":null,"term":"GO:0030515"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08118","InterPro:IPR007109","EnsemblGenomes-Gn:SJAG_03252","GOA:B6K3R1","UniProtKB/TrEMBL:B6K3R1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ltc2","uniquename":"SJAG_03247"},{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"}],"genes_by_uniquename":{"HGNC:30856":null,"SJAG_03252":null,"SPAC19A8.07c":null,"YNL075W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Brix domain","id":"PF04427","interpro_description":"Brix domain","interpro_id":"IPR007109","interpro_name":"Brix","locations":[{"end":258,"start":91}],"match_end":258,"match_start":91,"name":"Brix"},{"dbname":"PROSITE_PROFILES","description":"Brix domain profile.","id":"PS50833","interpro_description":"Brix domain","interpro_id":"IPR007109","interpro_name":"Brix","locations":[{"end":266,"start":84}],"match_end":266,"match_start":84,"name":"BRIX"},{"dbname":"SMART","id":"SM00879","interpro_description":"Brix domain","interpro_id":"IPR007109","interpro_name":"Brix","locations":[{"end":260,"start":87}],"match_end":260,"match_start":87,"name":"Brix_2"},{"dbname":"FUNFAM","description":"IMP4, U3 small nucleolar ribonucleoprotein","id":"G3DSA:3.40.50.10480:FF:000001","locations":[{"end":256,"start":84}],"match_end":256,"match_start":84},{"dbname":"SUPERFAMILY","id":"SSF52954","locations":[{"end":263,"start":83}],"match_end":263,"match_start":83,"name":"Class II aaRS ABD-related"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10480","locations":[{"end":255,"start":84}],"match_end":255,"match_start":84},{"dbname":"PANTHER","id":"PTHR22734","interpro_description":"U3 snoRNP protein/Ribosome production factor 1","interpro_id":"IPR044281","interpro_name":"IMP4/RPF1","locations":[{"end":284,"start":3}],"match_end":284,"match_start":3,"name":"U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4"}],"location":{"chromosome_name":"supercont5.2","end_pos":727573,"start_pos":726704,"strand":"reverse"},"name":"imp4","ortholog_annotations":[{"gene_uniquename":"SJAG_03252","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30856","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03252","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03252","ortholog_taxonid":4932,"ortholog_uniquename":"YNL075W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03252","ortholog_taxonid":4932,"ortholog_uniquename":"YNL075W","reference_uniquename":"PMID:26896847"}],"product":"U3 snoRNP-associated protein Imp4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0030515","GO:0042134"]}},"subset_termids":["GO:0005730","GO:0030684","GO:0005634","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005730":null,"GO:0006364":null,"GO:0030515":null,"GO:0032040":null,"GO:0034457":null,"GO:0042134":null,"GO:0042274":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03252.1"],"transcripts_by_uniquename":{"SJAG_03252.1":null},"uniprot_identifier":"B6K3R1","uniquename":"SJAG_03252"}


id: SJAG_03253
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K3R2","EnsemblGenomes-Gn:SJAG_03253","EnsemblGenomes-Tr:EEB08119","InterPro:IPR021331"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ymr1","uniquename":"SJAG_03248"},{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"}],"genes_by_uniquename":{"SJAG_03253":null,"SPAC19A8.16":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Hypervirulence associated proteins TUDOR domain","id":"PF11160","interpro_description":"Hypervirulence associated protein, TUDOR domain","interpro_id":"IPR021331","interpro_name":"Hva1_TUDOR","locations":[{"end":61,"start":7}],"match_end":61,"match_start":7,"name":"Hva1_TUDOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":12,"start":1}],"match_end":12,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":728351,"start_pos":728104,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":25,"start":15}}],"name":"prl65","ortholog_annotations":[{"gene_uniquename":"SJAG_03253","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19A8.16","reference_uniquename":"PMID:26896847"}],"product":"tudor domain superfamily protein, potential role in central carbon metabolism based on C. neoformans metabolic data, see PF11160","references_by_uniquename":{"PMID:26896847":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03253.1"],"transcripts_by_uniquename":{"SJAG_03253.1":null},"uniprot_identifier":"B6K3R2","uniquename":"SJAG_03253"}


id: SJAG_03254
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100399],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[100396],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100397],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[100398],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100400],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[100401],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K3R3","EnsemblGenomes-Tr:EEB08120","InterPro:IPR039744","EnsemblGenomes-Gn:SJAG_03254","UniProtKB/TrEMBL:B6K3R3","InterPro:IPR001209"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erg5","uniquename":"SJAG_03249"},{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"}],"genes_by_uniquename":{"HGNC:10419":null,"SJAG_03254":null,"SPBC1685.09":null,"YDL061C":null,"YLR388W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S14p/S29e","id":"PF00253","interpro_description":"Small ribosomal subunit protein uS14","interpro_id":"IPR001209","interpro_name":"Ribosomal_uS14","locations":[{"end":55,"start":7}],"match_end":55,"match_start":7,"name":"Ribosomal_S14"},{"dbname":"FUNFAM","description":"40S ribosomal protein S29","id":"G3DSA:4.10.830.10:FF:000002","locations":[{"end":56,"start":1}],"match_end":56,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:4.10.830.10","interpro_description":"Small ribosomal subunit protein uS14 superfamily","interpro_id":"IPR043140","interpro_name":"Ribosomal_uS14_sf","locations":[{"end":56,"start":1}],"match_end":56,"match_start":1,"name":"30s Ribosomal Protein S14; Chain N"},{"dbname":"PANTHER","id":"PTHR12010","interpro_description":"Small ribosomal subunit protein uS14, eukaryotes/archaea","interpro_id":"IPR039744","interpro_name":"RIbosomal_uS14_euk_arc","locations":[{"end":55,"start":1}],"match_end":55,"match_start":1,"name":"40S RIBOSOMAL PROTEIN S29"}],"location":{"chromosome_name":"supercont5.2","end_pos":729631,"start_pos":729358,"strand":"reverse"},"name":"rps29","ortholog_annotations":[{"gene_uniquename":"SJAG_03254","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10419","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03254","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03254","ortholog_taxonid":4932,"ortholog_uniquename":"YDL061C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03254","ortholog_taxonid":4932,"ortholog_uniquename":"YDL061C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03254","ortholog_taxonid":4932,"ortholog_uniquename":"YLR388W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03254","ortholog_taxonid":4932,"ortholog_uniquename":"YLR388W","reference_uniquename":"PMID:26896847"}],"product":"40S ribosomal protein S29","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0008270"],"NOT binding":["GO:0003735"]}},"subset_termids":["GO:0005634","GO:0002181","GO:0005198","GO:0022626","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0022627":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03254.1"],"transcripts_by_uniquename":{"SJAG_03254.1":null},"uniprot_identifier":"B6K3R3","uniquename":"SJAG_03254"}


id: SJAG_03255
data:
  {"coiled_coil_coords":[{"range":{"end":425,"start":405}}],"cv_annotations":{"biological_process":[{"annotations":[100395],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[100391],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100392],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[100393],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[100394],"is_not":false,"summary":null,"term":"GO:0070210"}]},"dbxrefs":["GOA:B6K3R4","UniProtKB/TrEMBL:B6K3R4","EnsemblGenomes-Tr:EEB08121","InterPro:IPR019786","EnsemblGenomes-Gn:SJAG_03255","InterPro:IPR011011","InterPro:IPR013083","InterPro:IPR019787","InterPro:IPR001965"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":54,"start":1}},{"range":{"end":161,"start":119}},{"range":{"end":367,"start":175}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sst4","uniquename":"SJAG_03250"},{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"}],"genes_by_uniquename":{"SJAG_03255":null,"SPBC1685.08":null,"YPL181W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PhD finger domain","id":"PF20826","locations":[{"end":112,"start":52}],"match_end":112,"match_start":52,"name":"PHD_5"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger PHD-type signature.","id":"PS01359","interpro_description":"Zinc finger, PHD-type, conserved site","interpro_id":"IPR019786","interpro_name":"Zinc_finger_PHD-type_CS","locations":[{"end":111,"start":62}],"match_end":111,"match_start":62,"name":"ZF_PHD_1"},{"dbname":"SMART","id":"SM00249","interpro_description":"Zinc finger, PHD-type","interpro_id":"IPR001965","interpro_name":"Znf_PHD","locations":[{"end":112,"start":61}],"match_end":112,"match_start":61,"name":"PHD_3"},{"dbname":"SUPERFAMILY","id":"SSF57903","interpro_description":"Zinc finger, FYVE/PHD-type","interpro_id":"IPR011011","interpro_name":"Znf_FYVE_PHD","locations":[{"end":119,"start":51}],"match_end":119,"match_start":51,"name":"FYVE/PHD zinc finger"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":134,"start":50}],"match_end":134,"match_start":50,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR47793","interpro_description":"Histone deacetylase complex subunit","interpro_id":"IPR053051","interpro_name":"HDAC_complex_subunit","locations":[{"end":435,"start":2}],"match_end":435,"match_start":2,"name":"HISTONE DEACETYLASE COMPLEX SUBUNIT CTI6"},{"dbname":"COILS","id":"Coil","locations":[{"end":425,"start":405}],"match_end":425,"match_start":405,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":54,"start":1},{"end":161,"start":119},{"end":367,"start":175}],"match_end":367,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":195,"start":183},{"end":271,"start":250},{"end":321,"start":309}],"match_end":321,"match_start":183,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":159,"start":144},{"end":308,"start":287},{"end":351,"start":340}],"match_end":351,"match_start":144,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":33,"start":14}],"match_end":33,"match_start":14,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":337,"start":325}],"match_end":337,"match_start":325,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":731226,"start_pos":729880,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":194,"start":182}},{"range":{"end":285,"start":249}},{"range":{"end":320,"start":308}}],"name":"cti6","ortholog_annotations":[{"gene_uniquename":"SJAG_03255","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03255","ortholog_taxonid":4932,"ortholog_uniquename":"YPL181W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03255","ortholog_taxonid":4932,"ortholog_uniquename":"YPL181W","reference_uniquename":"PMID:26896847"}],"product":"Rpd3L histone deacetylase complex PHD finger subunit Cti6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006325","GO:0005634","GO:0006351","GO:0005694","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03255.1"],"transcripts_by_uniquename":{"SJAG_03255.1":null},"uniprot_identifier":"B6K3R4","uniquename":"SJAG_03255"}


id: SJAG_03256
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100376],"is_not":false,"summary":null,"term":"GO:0032975"},{"annotations":[100377],"is_not":false,"summary":null,"term":"GO:0090518"},{"annotations":[100378],"is_not":false,"summary":null,"term":"GO:1901481"},{"annotations":[100379],"is_not":false,"summary":null,"term":"GO:0090515"},{"annotations":[100380],"is_not":false,"summary":null,"term":"GO:0090513"},{"annotations":[100381],"is_not":false,"summary":null,"term":"GO:1901482"},{"annotations":[100382],"is_not":false,"summary":null,"term":"GO:0090517"},{"annotations":[100383],"is_not":false,"summary":null,"term":"GO:0090516"},{"annotations":[100384],"is_not":false,"summary":null,"term":"GO:0090514"}],"cellular_component":[{"annotations":[100375],"is_not":false,"summary":null,"term":"GO:0000329"}],"molecular_function":[{"annotations":[100385],"is_not":false,"summary":null,"term":"GO:0061459"},{"annotations":[100386],"is_not":false,"summary":null,"term":"GO:0005313"},{"annotations":[100387],"is_not":false,"summary":null,"term":"GO:0005290"},{"annotations":[100388],"is_not":false,"summary":null,"term":"GO:0015189"},{"annotations":[100389],"is_not":false,"summary":null,"term":"GO:0015194"},{"annotations":[100390],"is_not":false,"summary":null,"term":"GO:0005302"}]},"dbxrefs":["GOA:B6K3R5","EnsemblGenomes-Tr:EEB08122","InterPro:IPR013057","EnsemblGenomes-Gn:SJAG_03256","UniProtKB/TrEMBL:B6K3R5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pbr1","uniquename":"SJAG_03251"},{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"}],"genes_by_uniquename":{"HGNC:13448":null,"HGNC:14679":null,"HGNC:18044":null,"HGNC:18070":null,"SJAG_03256":null,"SPBC1685.07c":null,"YBL089W":null,"YER119C":null,"YIL088C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transmembrane amino acid transporter protein","id":"PF01490","interpro_description":"Amino acid transporter, transmembrane domain","interpro_id":"IPR013057","interpro_name":"AA_transpt_TM","locations":[{"end":388,"start":21}],"match_end":388,"match_start":21,"name":"Aa_trans"},{"dbname":"GENE3D","id":"G3DSA:1.20.1740.10","locations":[{"end":422,"start":21}],"match_end":422,"match_start":21,"name":"Amino acid/polyamine transporter I"},{"dbname":"PANTHER","id":"PTHR22950","locations":[{"end":409,"start":18}],"match_end":409,"match_start":18,"name":"AMINO ACID TRANSPORTER"}],"location":{"chromosome_name":"supercont5.2","end_pos":733143,"start_pos":731875,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":346,"start":335}}],"name":"avt5","ortholog_annotations":[{"gene_uniquename":"SJAG_03256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13448","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14679","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18044","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18070","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":4932,"ortholog_uniquename":"YBL089W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":4932,"ortholog_uniquename":"YER119C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03256","ortholog_taxonid":4932,"ortholog_uniquename":"YIL088C","reference_uniquename":"PMID:29761456"}],"product":"vacuolar amino acid transmembrane transporter Avt5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0061459","GO:0005313","GO:0005290","GO:0015194","GO:0015189","GO:0005302"]}},"subset_termids":["GO:0055085","GO:0022857","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015189":null,"GO:0015194":null,"GO:0032975":null,"GO:0061459":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:1901481":null,"GO:1901482":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":42,"start":20}},{"assigned_by":"TMHMM","range":{"end":74,"start":52}},{"assigned_by":"TMHMM","range":{"end":121,"start":99}},{"assigned_by":"TMHMM","range":{"end":160,"start":141}},{"assigned_by":"TMHMM","range":{"end":189,"start":167}},{"assigned_by":"TMHMM","range":{"end":221,"start":199}},{"assigned_by":"TMHMM","range":{"end":263,"start":241}},{"assigned_by":"TMHMM","range":{"end":302,"start":283}},{"assigned_by":"TMHMM","range":{"end":345,"start":323}},{"assigned_by":"TMHMM","range":{"end":377,"start":355}},{"assigned_by":"TMHMM","range":{"end":420,"start":398}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03256.1"],"transcripts_by_uniquename":{"SJAG_03256.1":null},"uniprot_identifier":"B6K3R5","uniquename":"SJAG_03256"}


id: SJAG_03257
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100372],"is_not":false,"summary":null,"term":"GO:0034472"}],"cellular_component":[{"annotations":[100370],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100371],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100373],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[100374],"is_not":false,"summary":null,"term":"GO:1990817"}]},"dbxrefs":["InterPro:IPR002058","InterPro:IPR002934","EnsemblGenomes-Tr:EEB08123","GOA:B6K3R6","UniProtKB/TrEMBL:B6K3R6","EnsemblGenomes-Gn:SJAG_03257"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"imp4","uniquename":"SJAG_03252"},{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"}],"genes_by_uniquename":{"HGNC:25817":null,"HGNC:28981":null,"SJAG_03257":null,"SPBC1685.06":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cid1 family poly A polymerase","id":"PF03828","interpro_description":"PAP/25A-associated","interpro_id":"IPR002058","interpro_name":"PAP_assoc","locations":[{"end":317,"start":263}],"match_end":317,"match_start":263,"name":"PAP_assoc"},{"dbname":"PFAM","description":"Poly(A) RNA polymerase, mitochondrial-like, central palm domain","id":"PF22600","interpro_description":"Poly(A) RNA polymerase, mitochondrial-like, central palm domain","interpro_id":"IPR054708","interpro_name":"MTPAP-like_central","locations":[{"end":187,"start":58}],"match_end":187,"match_start":58,"name":"MTPAP-like_central"},{"dbname":"CDD","description":"NT_PAP_TUTase","id":"cd05402","locations":[{"end":189,"start":76}],"match_end":189,"match_start":76,"name":"NT_PAP_TUTase"},{"dbname":"SUPERFAMILY","id":"SSF81631","locations":[{"end":350,"start":194}],"match_end":350,"match_start":194,"name":"PAP/OAS1 substrate-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF81301","interpro_description":"Nucleotidyltransferase superfamily","interpro_id":"IPR043519","interpro_name":"NT_sf","locations":[{"end":189,"start":55}],"match_end":189,"match_start":55,"name":"Nucleotidyltransferase"},{"dbname":"GENE3D","id":"G3DSA:1.10.1410.10","locations":[{"end":342,"start":192}],"match_end":342,"match_start":192},{"dbname":"GENE3D","id":"G3DSA:3.30.460.10","interpro_description":"Nucleotidyltransferase superfamily","interpro_id":"IPR043519","interpro_name":"NT_sf","locations":[{"end":191,"start":77}],"match_end":191,"match_start":77,"name":"Beta Polymerase, domain 2"},{"dbname":"PANTHER","id":"PTHR12271","locations":[{"end":347,"start":47}],"match_end":347,"match_start":47,"name":"POLY A  POLYMERASE CID  PAP -RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":734733,"start_pos":733311,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":283,"start":270}}],"name":"cid11","ortholog_annotations":[{"gene_uniquename":"SJAG_03257","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25817","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03257","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28981","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03257","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.06","reference_uniquename":"PMID:26896847"}],"product":"poly(A) polymerase Cid11, terminal uridylyl transferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0005524"],"NOT binding":["GO:1990817"]}},"subset_termids":["GO:0005829","GO:0016779","GO:0005634","GO:0016073"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0034472":null,"GO:1990817":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03257.1"],"transcripts_by_uniquename":{"SJAG_03257.1":null},"uniprot_identifier":"B6K3R6","uniquename":"SJAG_03257"}


id: SJAG_03258
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73288],"is_not":false,"summary":null,"term":"GO:0043065"},{"annotations":[100368],"is_not":false,"summary":null,"term":"GO:0051603"}],"cellular_component":[{"annotations":[100366],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100367],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100369],"is_not":false,"summary":null,"term":"GO:0004252"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03258","InterPro:IPR009003","EnsemblGenomes-Tr:EEB08124","InterPro:IPR036034","InterPro:IPR025926","UniProtKB/TrEMBL:B6K3R7","InterPro:IPR001478","GOA:B6K3R7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prl65","uniquename":"SJAG_03253"},{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"}],"genes_by_uniquename":{"HGNC:14348":null,"HGNC:26909":null,"HGNC:30406":null,"HGNC:9476":null,"SJAG_03258":null,"SPBC1685.05":null,"YNL123W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PDZ-like domain","id":"PF12812","interpro_description":"PDZ-like domain","interpro_id":"IPR025926","interpro_name":"PDZ-like_dom","locations":[{"end":475,"start":399}],"match_end":475,"match_start":399,"name":"PDZ_1"},{"dbname":"PFAM","description":"Trypsin-like peptidase domain","id":"PF13365","locations":[{"end":251,"start":105}],"match_end":251,"match_start":105,"name":"Trypsin_2"},{"dbname":"SMART","id":"SM00228","interpro_description":"PDZ domain","interpro_id":"IPR001478","interpro_name":"PDZ","locations":[{"end":854,"start":776},{"end":961,"start":876}],"match_end":961,"match_start":776,"name":"pdz_new"},{"dbname":"SUPERFAMILY","id":"SSF50156","interpro_description":"PDZ superfamily","interpro_id":"IPR036034","interpro_name":"PDZ_sf","locations":[{"end":881,"start":800},{"end":964,"start":903}],"match_end":964,"match_start":800,"name":"PDZ domain-like"},{"dbname":"SUPERFAMILY","id":"SSF50494","interpro_description":"Peptidase S1, PA clan","interpro_id":"IPR009003","interpro_name":"Peptidase_S1_PA","locations":[{"end":277,"start":69}],"match_end":277,"match_start":69,"name":"Trypsin-like serine proteases"},{"dbname":"GENE3D","id":"G3DSA:2.30.42.10","interpro_description":"PDZ superfamily","interpro_id":"IPR036034","interpro_name":"PDZ_sf","locations":[{"end":869,"start":802},{"end":973,"start":876}],"match_end":973,"match_start":802},{"dbname":"GENE3D","id":"G3DSA:2.40.10.120","locations":[{"end":283,"start":63}],"match_end":283,"match_start":63},{"dbname":"PANTHER","id":"PTHR46366","locations":[{"end":985,"start":54}],"match_end":985,"match_start":54,"name":"PRO-APOPTOTIC SERINE PROTEASE NMA111"}],"location":{"chromosome_name":"supercont5.2","end_pos":738198,"start_pos":735202,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":93,"start":78}},{"range":{"end":238,"start":229}},{"range":{"end":660,"start":648}},{"range":{"end":701,"start":694}}],"name":"htr11","ortholog_annotations":[{"gene_uniquename":"SJAG_03258","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14348","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03258","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26909","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03258","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30406","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03258","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9476","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03258","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03258","ortholog_taxonid":4932,"ortholog_uniquename":"YNL123W","reference_uniquename":"PMID:29761456"}],"product":"serine protease","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004252"]}},"subset_termids":["GO:0005634","GO:0030163","GO:0008233","GO:0140096","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004252":null,"GO:0005634":null,"GO:0005829":null,"GO:0043065":null,"GO:0051603":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03258.1"],"transcripts_by_uniquename":{"SJAG_03258.1":null},"uniprot_identifier":"B6K3R7","uniquename":"SJAG_03258"}


id: SJAG_03259
data:
  {"coiled_coil_coords":[{"range":{"end":155,"start":135}},{"range":{"end":210,"start":158}}],"cv_annotations":{"cellular_component":[{"annotations":[100363],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100364],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[100365],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08125","UniProtKB/TrEMBL:B6K3R8","EnsemblGenomes-Gn:SJAG_03259"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":20,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps29","uniquename":"SJAG_03254"},{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"}],"genes_by_uniquename":{"SJAG_03259":null,"SPBC1685.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":155,"start":135},{"end":210,"start":158}],"match_end":210,"match_start":135,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":11,"start":1}],"match_end":11,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":740056,"start_pos":739025,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":153,"start":140}},{"range":{"end":172,"start":158}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03259","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.04","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0015630","GO:0005816","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0044732":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03259.1"],"transcripts_by_uniquename":{"SJAG_03259.1":null},"uniprot_identifier":"B6K3R8","uniquename":"SJAG_03259"}


id: SJAG_03261
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100361],"is_not":false,"summary":null,"term":"GO:0006465"}],"cellular_component":[{"annotations":[100359],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[100360],"is_not":false,"summary":null,"term":"GO:0005787"}],"molecular_function":[{"annotations":[100362],"is_not":false,"summary":null,"term":"GO:0004252"}]},"dbxrefs":["GOA:B6K3S0","InterPro:IPR036286","InterPro:IPR015927","EnsemblGenomes-Gn:SJAG_03261","EnsemblGenomes-Tr:EEB08127","InterPro:IPR001733","UniProtKB/TrEMBL:B6K3S0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"}],"genes_by_uniquename":{"HGNC:17718":null,"HGNC:23400":null,"SJAG_03261":null,"SPBC1685.03":null,"YIR022W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CDD","description":"S26_SPase_I","id":"cd06530","interpro_description":"Peptidase S26","interpro_id":"IPR019533","interpro_name":"Peptidase_S26","locations":[{"end":131,"start":40}],"match_end":131,"match_start":40,"name":"S26_SPase_I"},{"dbname":"PRINTS","description":"Eukaryotic signal peptidase (S26B) family signature","id":"PR00728","interpro_description":"Peptidase S26B","interpro_id":"IPR001733","interpro_name":"Peptidase_S26B","locations":[{"end":59,"start":44},{"end":131,"start":120}],"match_end":131,"match_start":44,"name":"SIGNALPTASE"},{"dbname":"SUPERFAMILY","id":"SSF51306","interpro_description":"LexA/Signal peptidase-like superfamily","interpro_id":"IPR036286","interpro_name":"LexA/Signal_pep-like_sf","locations":[{"end":136,"start":41}],"match_end":136,"match_start":41,"name":"LexA/Signal peptidase"},{"dbname":"GENE3D","id":"G3DSA:2.10.109.10","locations":[{"end":163,"start":39}],"match_end":163,"match_start":39,"name":"Umud Fragment, subunit A"},{"dbname":"PANTHER","id":"PTHR10806","interpro_description":"Peptidase S26B","interpro_id":"IPR001733","interpro_name":"Peptidase_S26B","locations":[{"end":188,"start":8}],"match_end":188,"match_start":8,"name":"SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11"}],"location":{"chromosome_name":"supercont5.2","end_pos":742241,"start_pos":741405,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":184,"start":174}}],"name":"sec11","ortholog_annotations":[{"gene_uniquename":"SJAG_03261","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17718","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03261","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23400","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03261","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03261","ortholog_taxonid":4932,"ortholog_uniquename":"YIR022W","reference_uniquename":"PMID:29761456"}],"product":"signal peptidase subunit Sec11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004252"]}},"subset_termids":["GO:0140096","GO:0008233","GO:0051604","GO:0005789","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004252":null,"GO:0005783":null,"GO:0005787":null,"GO:0006465":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03261.1"],"transcripts_by_uniquename":{"SJAG_03261.1":null},"uniprot_identifier":"B6K3S0","uniquename":"SJAG_03261"}


id: SJAG_03262
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100355,115206],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[100356,115207],"is_not":false,"summary":null,"term":"GO:1990145"},{"annotations":[100357,115208],"is_not":false,"summary":null,"term":"GO:0042274"}],"cellular_component":[{"annotations":[100352],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100353,115205],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[100354],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100358,115209],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR000530","UniProtKB/TrEMBL:B6K3S1","GOA:B6K3S1","EnsemblGenomes-Tr:EEB08128","InterPro:IPR029064","EnsemblGenomes-Gn:SJAG_03262","InterPro:IPR004038"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"}],"genes_by_uniquename":{"HGNC:10385":null,"SJAG_03262":null,"SPBC1685.02c":null,"SPCC962.04":null,"YOR369C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family","id":"PF01248","interpro_description":"Ribosomal protein eL8/eL30/eS12/Gadd45","interpro_id":"IPR004038","interpro_name":"Ribosomal_eL8/eL30/eS12/Gad45","locations":[{"end":126,"start":32}],"match_end":126,"match_start":32,"name":"Ribosomal_L7Ae"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein S12e signature.","id":"PS01189","interpro_description":"Small ribosomal subunit protein eS12, conserved site","interpro_id":"IPR047860","interpro_name":"Ribosomal_eS12_CS","locations":[{"end":51,"start":33}],"match_end":51,"match_start":33,"name":"RIBOSOMAL_S12E"},{"dbname":"PRINTS","description":"Ribosomal protein S12E family signature","id":"PR00972","interpro_description":"Small ribosomal subunit protein eS12","interpro_id":"IPR000530","interpro_name":"Ribosomal_eS12","locations":[{"end":67,"start":37},{"end":113,"start":92},{"end":130,"start":117}],"match_end":130,"match_start":37,"name":"RIBSOMALS12E"},{"dbname":"FUNFAM","description":"40S ribosomal protein S12","id":"G3DSA:3.30.1330.30:FF:000005","locations":[{"end":146,"start":11}],"match_end":146,"match_start":11},{"dbname":"SUPERFAMILY","id":"SSF55315","interpro_description":"Ribosomal protein eL30-like superfamily","interpro_id":"IPR029064","interpro_name":"Ribosomal_eL30-like_sf","locations":[{"end":144,"start":29}],"match_end":144,"match_start":29,"name":"L30e-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1330.30","interpro_description":"Ribosomal protein eL30-like superfamily","interpro_id":"IPR029064","interpro_name":"Ribosomal_eL30-like_sf","locations":[{"end":146,"start":13}],"match_end":146,"match_start":13},{"dbname":"PANTHER","id":"PTHR11843","locations":[{"end":144,"start":21}],"match_end":144,"match_start":21,"name":"40S RIBOSOMAL PROTEIN S12"}],"location":{"chromosome_name":"supercont5.2","end_pos":743098,"start_pos":742658,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":24,"start":12}}],"name":"rps12","ortholog_annotations":[{"gene_uniquename":"SJAG_03262","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10385","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03262","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10385","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03262","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03262","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC962.04","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03262","ortholog_taxonid":4932,"ortholog_uniquename":"YOR369C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03262","ortholog_taxonid":4932,"ortholog_uniquename":"YOR369C","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0003735"]}},"subset_termids":["GO:0042254","GO:0002181","GO:0005198","GO:0005829","GO:0005634","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0005829":null,"GO:0022627":null,"GO:0042274":null,"GO:1990145":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03262.1"],"transcripts_by_uniquename":{"SJAG_03262.1":null},"uniprot_identifier":"B6K3S1","uniquename":"SJAG_03262"}


id: SJAG_03263
data:
  {"cv_annotations":{"biological_process":[{"annotations":[58162],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[100348],"is_not":false,"summary":null,"term":"GO:1903138"}],"cellular_component":[{"annotations":[100345],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100346],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100347],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100349],"is_not":false,"summary":null,"term":"GO:0033550"},{"annotations":[100350],"is_not":false,"summary":null,"term":"GO:0017017"},{"annotations":[100351],"is_not":false,"summary":null,"term":"GO:0008330"}]},"dbxrefs":["GOA:B6K3S2","InterPro:IPR016130","InterPro:IPR029021","InterPro:IPR000387","EnsemblGenomes-Tr:EEB08129","UniProtKB/TrEMBL:B6K3S2","InterPro:IPR000340","InterPro:IPR020422","EnsemblGenomes-Gn:SJAG_03263"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":56,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"}],"genes_by_uniquename":{"HGNC:17909":null,"HGNC:3064":null,"HGNC:3065":null,"HGNC:3070":null,"HGNC:3074":null,"SJAG_03263":null,"SPBC1685.01":null,"YIL113W":null,"YNL053W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Dual specificity phosphatase, catalytic domain","id":"PF00782","interpro_description":"Dual specificity phosphatase, catalytic domain","interpro_id":"IPR000340","interpro_name":"Dual-sp_phosphatase_cat-dom","locations":[{"end":303,"start":162}],"match_end":303,"match_start":162,"name":"DSPc"},{"dbname":"CDD","description":"DSP_fungal_SDP1-like","id":"cd14521","locations":[{"end":305,"start":150}],"match_end":305,"match_start":150,"name":"DSP_fungal_SDP1-like"},{"dbname":"PROSITE_PATTERNS","description":"Tyrosine specific protein phosphatases active site.","id":"PS00383","interpro_description":"Protein-tyrosine phosphatase, active site","interpro_id":"IPR016130","interpro_name":"Tyr_Pase_AS","locations":[{"end":259,"start":249}],"match_end":259,"match_start":249,"name":"TYR_PHOSPHATASE_1"},{"dbname":"PROSITE_PROFILES","description":"Dual specificity protein phosphatase domain profile.","id":"PS50054","interpro_description":"Dual specificity protein phosphatase domain","interpro_id":"IPR020422","interpro_name":"TYR_PHOSPHATASE_DUAL_dom","locations":[{"end":307,"start":153}],"match_end":307,"match_start":153,"name":"TYR_PHOSPHATASE_DUAL"},{"dbname":"PROSITE_PROFILES","description":"Tyrosine specific protein phosphatases domain profile.","id":"PS50056","interpro_description":"Tyrosine-specific protein phosphatases domain","interpro_id":"IPR000387","interpro_name":"Tyr_Pase_dom","locations":[{"end":286,"start":227}],"match_end":286,"match_start":227,"name":"TYR_PHOSPHATASE_2"},{"dbname":"SMART","id":"SM00195","interpro_description":"Dual specificity protein phosphatase domain","interpro_id":"IPR020422","interpro_name":"TYR_PHOSPHATASE_DUAL_dom","locations":[{"end":304,"start":153}],"match_end":304,"match_start":153,"name":"dsp_5"},{"dbname":"SUPERFAMILY","id":"SSF52799","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":304,"start":144}],"match_end":304,"match_start":144,"name":"(Phosphotyrosine protein) phosphatases II"},{"dbname":"GENE3D","id":"G3DSA:3.90.190.10","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":306,"start":148}],"match_end":306,"match_start":148,"name":"Protein tyrosine phosphatase superfamily"},{"dbname":"PANTHER","id":"PTHR10159","locations":[{"end":351,"start":70}],"match_end":351,"match_start":70,"name":"DUAL SPECIFICITY PROTEIN PHOSPHATASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":56,"start":1}],"match_end":56,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":42,"start":30}],"match_end":42,"match_start":30,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":744838,"start_pos":743612,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":43,"start":29}},{"range":{"end":76,"start":61}},{"range":{"end":111,"start":96}},{"range":{"end":367,"start":331}},{"range":{"end":396,"start":382}}],"name":"pmp1","ortholog_annotations":[{"gene_uniquename":"SJAG_03263","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17909","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3064","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3065","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3070","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3074","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":4932,"ortholog_uniquename":"YIL113W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":4932,"ortholog_uniquename":"YIL113W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":4932,"ortholog_uniquename":"YNL053W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03263","ortholog_taxonid":4932,"ortholog_uniquename":"YNL053W","reference_uniquename":"PMID:26896847"}],"product":"dual-specificity MAP kinase phosphatase Pmp1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0008330","GO:0033550","GO:0017017"]}},"subset_termids":["GO:0004721","GO:0005829","GO:0140096","GO:0016788","GO:0006325","GO:0005634","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006338":null,"GO:0008330":null,"GO:0017017":null,"GO:0033550":null,"GO:1903138":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03263.1"],"transcripts_by_uniquename":{"SJAG_03263.1":null},"uniprot_identifier":"B6K3S2","uniquename":"SJAG_03263"}


id: SJAG_03264
data:
  {"coiled_coil_coords":[{"range":{"end":192,"start":165}}],"cv_annotations":{"biological_process":[{"annotations":[109279],"is_not":false,"summary":null,"term":"GO:0031024"},{"annotations":[109280],"is_not":false,"summary":null,"term":"GO:0001578"},{"annotations":[109281],"is_not":false,"summary":null,"term":"GO:0000281"},{"annotations":[109282],"is_not":false,"summary":null,"term":"GO:0007097"}],"cellular_component":[{"annotations":[109270],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[109271],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109272],"is_not":false,"summary":null,"term":"GO:0005881"},{"annotations":[109273],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109274],"is_not":false,"summary":null,"term":"GO:0000923"},{"annotations":[109275],"is_not":false,"summary":null,"term":"GO:0031021"},{"annotations":[109276],"is_not":false,"summary":null,"term":"GO:0015630"},{"annotations":[109277],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[109278],"is_not":false,"summary":null,"term":"GO:0099070"}],"molecular_function":[{"annotations":[109283],"is_not":false,"summary":null,"term":"GO:0106006"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3S3","EnsemblGenomes-Tr:EEB08130","EnsemblGenomes-Gn:SJAG_03264"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":448,"start":322}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"}],"genes_by_uniquename":{"SJAG_03264":null,"SPBC902.06":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":192,"start":165}],"match_end":192,"match_start":165,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":448,"start":322}],"match_end":448,"match_start":322,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":336,"start":322}],"match_end":336,"match_start":322,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":354,"start":344},{"end":396,"start":383},{"end":447,"start":437}],"match_end":447,"match_start":344,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":380,"start":367}],"match_end":380,"match_start":367,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":747200,"start_pos":745809,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":203,"start":192}},{"range":{"end":218,"start":207}},{"range":{"end":335,"start":316}}],"name":"mto2","ortholog_annotations":[{"gene_uniquename":"SJAG_03264","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC902.06","reference_uniquename":"PMID:21511999"}],"product":"gamma tubulin complex linker Mto2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0106006"]}},"subset_termids":["GO:0000226","GO:0005816","GO:0000281","GO:0005829","GO:0015630","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000281":null,"GO:0000923":null,"GO:0001578":null,"GO:0005737":null,"GO:0005829":null,"GO:0005881":null,"GO:0007097":null,"GO:0015630":null,"GO:0031021":null,"GO:0031024":null,"GO:0032153":null,"GO:0044732":null,"GO:0099070":null,"GO:0106006":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03264.1"],"transcripts_by_uniquename":{"SJAG_03264.1":null},"uniprot_identifier":"B6K3S3","uniquename":"SJAG_03264"}


id: SJAG_03265
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[114233],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[114234],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[114235],"is_not":false,"summary":null,"term":"GO:0005886"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08131","GOA:B6K3S4","UniProtKB/TrEMBL:B6K3S4","EnsemblGenomes-Gn:SJAG_03265","InterPro:IPR006876"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"}],"genes_by_uniquename":{"HGNC:25287":null,"SJAG_03265":null,"SPCC622.11":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LMBR1-like membrane protein","id":"PF04791","interpro_description":"LMBR1-like membrane protein","interpro_id":"IPR006876","interpro_name":"LMBR1-like_membr_prot","locations":[{"end":446,"start":7}],"match_end":446,"match_start":7,"name":"LMBR1"},{"dbname":"PANTHER","id":"PTHR21355","interpro_description":"GPCR-associated LMBR1 domain-containing protein","interpro_id":"IPR051584","interpro_name":"GPCR-associated_LMBR1","locations":[{"end":200,"start":5}],"match_end":200,"match_start":5,"name":"G-PROTEIN COUPLED RECEPTOR-ASSOCIATED PROTEIN LMBRD2"}],"location":{"chromosome_name":"supercont5.2","end_pos":749369,"start_pos":747706,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":48,"start":30}},{"range":{"end":318,"start":305}},{"range":{"end":363,"start":355}}],"name":"lmb1","ortholog_annotations":[{"gene_uniquename":"SJAG_03265","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25287","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03265","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC622.11","reference_uniquename":"PMID:21511999"}],"product":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005794":null,"GO:0005886":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":21,"start":4}},{"assigned_by":"TMHMM","range":{"end":50,"start":28}},{"assigned_by":"TMHMM","range":{"end":87,"start":65}},{"assigned_by":"TMHMM","range":{"end":126,"start":107}},{"assigned_by":"TMHMM","range":{"end":158,"start":136}},{"assigned_by":"TMHMM","range":{"end":317,"start":295}},{"assigned_by":"TMHMM","range":{"end":359,"start":337}},{"assigned_by":"TMHMM","range":{"end":402,"start":380}},{"assigned_by":"TMHMM","range":{"end":451,"start":432}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03265.1"],"transcripts_by_uniquename":{"SJAG_03265.1":null},"uniprot_identifier":"B6K3S4","uniquename":"SJAG_03265"}


id: SJAG_03266
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114239],"is_not":false,"summary":null,"term":"GO:0019676"},{"annotations":[114240],"is_not":false,"summary":null,"term":"GO:0097054"}],"cellular_component":[{"annotations":[114236],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114237],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[114238],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[114241],"is_not":false,"summary":null,"term":"GO:0004354"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3S5","InterPro:IPR006097","InterPro:IPR014362","InterPro:IPR006095","GOA:B6K3S5","InterPro:IPR006096","InterPro:IPR033524","EnsemblGenomes-Tr:EEB08132","EnsemblGenomes-Gn:SJAG_03266","InterPro:IPR033922","InterPro:IPR036291"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"}],"genes_by_uniquename":{"HGNC:4335":null,"HGNC:4336":null,"SJAG_03266":null,"SPCC622.12c":null,"YAL062W":null,"YOR375C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glutamate/Leucine/Phenylalanine/Valine dehydrogenase","id":"PF00208","interpro_description":"Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal","interpro_id":"IPR006096","interpro_name":"Glu/Leu/Phe/Val/Trp_DH_C","locations":[{"end":448,"start":190}],"match_end":448,"match_start":190,"name":"ELFV_dehydrog"},{"dbname":"PFAM","description":"Glu/Leu/Phe/Val dehydrogenase, dimerisation domain","id":"PF02812","interpro_description":"Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain","interpro_id":"IPR006097","interpro_name":"Glu/Leu/Phe/Val/Trp_DH_dimer","locations":[{"end":172,"start":45}],"match_end":172,"match_start":45,"name":"ELFV_dehydrog_N"},{"dbname":"CDD","description":"NAD_bind_2_Glu_DH","id":"cd05313","interpro_description":"NAD(P) binding domain of glutamate dehydrogenase","interpro_id":"IPR033922","interpro_name":"NAD_bind_Glu_DH","locations":[{"end":447,"start":183}],"match_end":447,"match_start":183,"name":"NAD_bind_2_Glu_DH"},{"dbname":"PROSITE_PATTERNS","description":"Glu / Leu / Phe / Val dehydrogenases active site.","id":"PS00074","interpro_description":"Leu/Phe/Val dehydrogenases active site","interpro_id":"IPR033524","interpro_name":"Glu/Leu/Phe/Val_DH_AS","locations":[{"end":123,"start":110}],"match_end":123,"match_start":110,"name":"GLFV_DEHYDROGENASE"},{"dbname":"SMART","id":"SM00839","interpro_description":"Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal","interpro_id":"IPR006096","interpro_name":"Glu/Leu/Phe/Val/Trp_DH_C","locations":[{"end":451,"start":192}],"match_end":451,"match_start":192,"name":"ELFV_dehydrog_3"},{"dbname":"PRINTS","description":"Glutamate/leucine/phenylalanine/valine dehydrogenase signature","id":"PR00082","interpro_description":"Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase","interpro_id":"IPR006095","interpro_name":"Glu/Leu/Phe/Val/Trp_DH","locations":[{"end":116,"start":102},{"end":203,"start":181},{"end":246,"start":226},{"end":383,"start":372}],"match_end":383,"match_start":102,"name":"GLFDHDRGNASE"},{"dbname":"FUNFAM","description":"Glutamate dehydrogenase","id":"G3DSA:3.40.50.10860:FF:000002","locations":[{"end":178,"start":43}],"match_end":178,"match_start":43},{"dbname":"FUNFAM","description":"Glutamate dehydrogenase","id":"G3DSA:1.10.285.10:FF:000001","locations":[{"end":451,"start":379}],"match_end":451,"match_start":379},{"dbname":"FUNFAM","description":"Glutamate dehydrogenase","id":"G3DSA:3.40.50.720:FF:000030","locations":[{"end":374,"start":197}],"match_end":374,"match_start":197},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":448,"start":190}],"match_end":448,"match_start":190,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SUPERFAMILY","id":"SSF53223","interpro_description":"Aminoacid dehydrogenase-like, N-terminal domain superfamily","interpro_id":"IPR046346","interpro_name":"Aminoacid_DH-like_N_sf","locations":[{"end":192,"start":9}],"match_end":192,"match_start":9,"name":"Aminoacid dehydrogenase-like, N-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.285.10","locations":[{"end":42,"start":8},{"end":450,"start":379}],"match_end":450,"match_start":8,"name":"Glutamate Dehydrogenase, chain A, domain 3"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":374,"start":197}],"match_end":374,"match_start":197},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10860","locations":[{"end":192,"start":43}],"match_end":192,"match_start":43,"name":"Leucine Dehydrogenase, chain A, domain 1"},{"dbname":"PANTHER","id":"PTHR43571","interpro_description":"Glutamate/Leucine/Phenylalanine/Valine dehydrogenases","interpro_id":"IPR050724","interpro_name":"Glu_Leu_Phe_Val_DH","locations":[{"end":449,"start":8}],"match_end":449,"match_start":8,"name":"NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED"},{"dbname":"PIRSF","id":"PIRSF000185","interpro_description":"Glutamate dehydrogenase","interpro_id":"IPR014362","interpro_name":"Glu_DH","locations":[{"end":454,"start":10}],"match_end":454,"match_start":10,"name":"Glu_DH"}],"location":{"chromosome_name":"supercont5.2","end_pos":750878,"start_pos":749514,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":117,"start":112}}],"name":"gdh1","ortholog_annotations":[{"gene_uniquename":"SJAG_03266","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4335","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03266","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4336","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03266","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC622.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03266","ortholog_taxonid":4932,"ortholog_uniquename":"YAL062W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03266","ortholog_taxonid":4932,"ortholog_uniquename":"YAL062W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03266","ortholog_taxonid":4932,"ortholog_uniquename":"YOR375C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03266","ortholog_taxonid":4932,"ortholog_uniquename":"YOR375C","reference_uniquename":"PMID:26896847"}],"product":"NADP-specific glutamate dehydrogenase Gdh1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004354"]}},"subset_termids":["GO:0005739","GO:0005634","GO:0005829","GO:0006520","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004354":null,"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0019676":null,"GO:0097054":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03266.1"],"transcripts_by_uniquename":{"SJAG_03266.1":null},"uniprot_identifier":"B6K3S5","uniquename":"SJAG_03266"}


id: SJAG_03267
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114244],"is_not":false,"summary":null,"term":"GO:0051083"}],"cellular_component":[{"annotations":[114242],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114243],"is_not":false,"summary":null,"term":"GO:0110078"}],"molecular_function":[{"annotations":[114245],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03267","EnsemblGenomes-Tr:EEB08133","UniProtKB/TrEMBL:B6K3S6","InterPro:IPR016024"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":690,"start":640}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"}],"genes_by_uniquename":{"HGNC:29029":null,"SJAG_03267":null,"SPCC622.13c":null,"YKL033W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TELO2-interacting protein 1","id":"PF21547","interpro_description":"TELO2-interacting protein 1, middle region repeats","interpro_id":"IPR049362","interpro_name":"TTI1_rpt","locations":[{"end":565,"start":476}],"match_end":565,"match_start":476,"name":"TTI1"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":368,"start":88},{"end":592,"start":466},{"end":867,"start":737}],"match_end":867,"match_start":88,"name":"ARM repeat"},{"dbname":"PANTHER","id":"PTHR18460","interpro_description":"TELO2-interacting protein 1 homolog","interpro_id":"IPR052587","interpro_name":"TELO2-interacting_protein_1","locations":[{"end":962,"start":420}],"match_end":962,"match_start":420,"name":"TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":690,"start":640}],"match_end":690,"match_start":640,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":679,"start":664}],"match_end":679,"match_start":664,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":663,"start":642}],"match_end":663,"match_start":642,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":754788,"start_pos":751558,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":43,"start":29}},{"range":{"end":185,"start":168}},{"range":{"end":453,"start":442}},{"range":{"end":482,"start":471}},{"range":{"end":569,"start":555}},{"range":{"end":678,"start":660}},{"range":{"end":761,"start":747}}],"name":"tti1","ortholog_annotations":[{"gene_uniquename":"SJAG_03267","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29029","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03267","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC622.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03267","ortholog_taxonid":4932,"ortholog_uniquename":"YKL033W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03267","ortholog_taxonid":4932,"ortholog_uniquename":"YKL033W","reference_uniquename":"PMID:26896847"}],"product":"TTT co-chaperone complex, armadillo-type fold subunit Tti1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0030674"]}},"subset_termids":["GO:0005829","GO:0051604","GO:0006457","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0030674":null,"GO:0051083":null,"GO:0110078":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03267.1"],"transcripts_by_uniquename":{"SJAG_03267.1":null},"uniprot_identifier":"B6K3S6","uniquename":"SJAG_03267"}


id: SJAG_03268
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114247],"is_not":false,"summary":null,"term":"GO:0048205"},{"annotations":[77720],"is_not":false,"summary":null,"term":"GO:0030100"}],"cellular_component":[{"annotations":[114246],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[77719],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[114248],"is_not":false,"summary":null,"term":"GO:0005096"}]},"dbxrefs":["InterPro:IPR037278","EnsemblGenomes-Gn:SJAG_03268","GOA:B6K3S7","EnsemblGenomes-Tr:EEB08134","InterPro:IPR001164","InterPro:IPR038508","UniProtKB/TrEMBL:B6K3S7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":151,"start":123}},{"range":{"end":305,"start":275}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"}],"genes_by_uniquename":{"HGNC:15852":null,"SJAG_03268":null,"SPCC622.14":null,"YDL226C":null,"YNL204C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Putative GTPase activating protein for Arf","id":"PF01412","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":114,"start":5}],"match_end":114,"match_start":5,"name":"ArfGap"},{"dbname":"CDD","description":"ArfGap_ArfGap1","id":"cd08830","locations":[{"end":118,"start":3}],"match_end":118,"match_start":3,"name":"ArfGap_ArfGap1"},{"dbname":"PROSITE_PROFILES","description":"ARF GTPase-activating proteins domain profile.","id":"PS50115","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":121,"start":4}],"match_end":121,"match_start":4,"name":"ARFGAP"},{"dbname":"SMART","id":"SM00105","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":121,"start":4}],"match_end":121,"match_start":4,"name":"arf_gap_3"},{"dbname":"PRINTS","description":"HIV Rev interacting protein signature","id":"PR00405","interpro_description":"Arf GTPase activating protein","interpro_id":"IPR001164","interpro_name":"ArfGAP_dom","locations":[{"end":52,"start":16},{"end":77,"start":56}],"match_end":77,"match_start":16,"name":"REVINTRACTNG"},{"dbname":"FUNFAM","description":"ADP-ribosylation factor GTPase-activating protein","id":"G3DSA:1.10.220.150:FF:000014","locations":[{"end":130,"start":1}],"match_end":130,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF57863","interpro_description":"ARFGAP/RecO-like zinc finger","interpro_id":"IPR037278","interpro_name":"ARFGAP/RecO","locations":[{"end":91,"start":5}],"match_end":91,"match_start":5,"name":"ArfGap/RecO-like zinc finger"},{"dbname":"GENE3D","id":"G3DSA:1.10.220.150","interpro_description":"ArfGAP domain superfamily","interpro_id":"IPR038508","interpro_name":"ArfGAP_dom_sf","locations":[{"end":141,"start":1}],"match_end":141,"match_start":1,"name":"Arf GTPase activating protein"},{"dbname":"PANTHER","id":"PTHR46395","locations":[{"end":300,"start":3}],"match_end":300,"match_start":3,"name":"ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":151,"start":123},{"end":305,"start":275}],"match_end":305,"match_start":123,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":151,"start":135}],"match_end":151,"match_start":135,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":756894,"start_pos":755674,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":150,"start":134}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03268","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15852","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03268","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC622.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03268","ortholog_taxonid":4932,"ortholog_uniquename":"YDL226C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03268","ortholog_taxonid":4932,"ortholog_uniquename":"YDL226C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03268","ortholog_taxonid":4932,"ortholog_uniquename":"YNL204C","reference_uniquename":"PMID:29761456"}],"product":"GTPase activating protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0005096"]}},"subset_termids":["GO:0098772","GO:0030234","GO:0016192","GO:0005794","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005096":null,"GO:0005737":null,"GO:0030100":null,"GO:0048205":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03268.1"],"transcripts_by_uniquename":{"SJAG_03268.1":null},"uniprot_identifier":"B6K3S7","uniquename":"SJAG_03268"}


id: SJAG_03269
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[114249],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[114250],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3S8","EnsemblGenomes-Tr:EEB08135","EnsemblGenomes-Gn:SJAG_03269"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":106,"start":1}},{"range":{"end":221,"start":181}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"}],"genes_by_uniquename":{"SJAG_03269":null,"SPCC622.15c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":106,"start":1},{"end":221,"start":181}],"match_end":221,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":28,"start":16},{"end":106,"start":96}],"match_end":106,"match_start":16,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":12,"start":1}],"match_end":12,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":758601,"start_pos":757072,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":27,"start":15}},{"range":{"end":72,"start":63}},{"range":{"end":105,"start":95}},{"range":{"end":168,"start":154}},{"range":{"end":210,"start":204}},{"range":{"end":331,"start":319}},{"range":{"end":356,"start":341}},{"range":{"end":376,"start":365}},{"range":{"end":410,"start":386}},{"range":{"end":428,"start":412}},{"range":{"end":466,"start":447}},{"range":{"end":484,"start":472}},{"range":{"end":497,"start":486}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03269","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC622.15c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03269.1"],"transcripts_by_uniquename":{"SJAG_03269.1":null},"uniprot_identifier":"B6K3S8","uniquename":"SJAG_03269"}


id: SJAG_03270
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86862],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[86863],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[86864],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[86858],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[86859],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[86860],"is_not":false,"summary":null,"term":"GO:0005793"},{"annotations":[86861],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08136","GOA:B6K3S9","InterPro:IPR009038","InterPro:IPR036598","UniProtKB/TrEMBL:B6K3S9","EnsemblGenomes-Gn:SJAG_03270","InterPro:IPR015720"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lmb1","uniquename":"SJAG_03265"},{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"}],"genes_by_uniquename":{"HGNC:28889":null,"SJAG_03270":null,"SPAC17A5.08":null,"YAL007C":null,"YDL018C":null,"YOR016C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"emp24/gp25L/p24 family/GOLD","id":"PF01105","interpro_description":"GOLD domain","interpro_id":"IPR009038","interpro_name":"GOLD_dom","locations":[{"end":200,"start":19}],"match_end":200,"match_start":19,"name":"EMP24_GP25L"},{"dbname":"PROSITE_PROFILES","description":"GOLD domain profile.","id":"PS50866","interpro_description":"GOLD domain","interpro_id":"IPR009038","interpro_name":"GOLD_dom","locations":[{"end":112,"start":29}],"match_end":112,"match_start":29,"name":"GOLD"},{"dbname":"SMART","id":"SM01190","interpro_description":"GOLD domain","interpro_id":"IPR009038","interpro_name":"GOLD_dom","locations":[{"end":200,"start":19}],"match_end":200,"match_start":19,"name":"EMP24_GP25L_2"},{"dbname":"SUPERFAMILY","id":"SSF101576","interpro_description":"GOLD domain superfamily","interpro_id":"IPR036598","interpro_name":"GOLD_dom_sf","locations":[{"end":115,"start":36}],"match_end":115,"match_start":36,"name":"Supernatant protein factor (SPF), C-terminal domain"},{"dbname":"PANTHER","id":"PTHR22811","interpro_description":"Transmembrane emp24 domain-containing protein","interpro_id":"IPR015720","interpro_name":"Emp24-like","locations":[{"end":202,"start":4}],"match_end":202,"match_start":4,"name":"TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN"}],"location":{"chromosome_name":"supercont5.2","end_pos":759846,"start_pos":759223,"strand":"forward"},"name":"erp2","ortholog_annotations":[{"gene_uniquename":"SJAG_03270","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28889","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4932,"ortholog_uniquename":"YAL007C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4932,"ortholog_uniquename":"YAL007C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4932,"ortholog_uniquename":"YDL018C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4932,"ortholog_uniquename":"YDL018C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4932,"ortholog_uniquename":"YOR016C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03270","ortholog_taxonid":4932,"ortholog_uniquename":"YOR016C","reference_uniquename":"PMID:26896847"}],"product":"COPII-coated vesicle component Erp2/3/4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016192","GO:0031410","GO:0005783","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005793":null,"GO:0005794":null,"GO:0006886":null,"GO:0006888":null,"GO:0007030":null,"GO:0030134":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":195,"start":173}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03270.1"],"transcripts_by_uniquename":{"SJAG_03270.1":null},"uniprot_identifier":"B6K3S9","uniquename":"SJAG_03270"}


id: SJAG_03272
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86867],"is_not":false,"summary":null,"term":"GO:0035556"}],"cellular_component":[{"annotations":[86865],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86866],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[86868],"is_not":false,"summary":null,"term":"GO:0004864"}]},"dbxrefs":["GOA:B6K3T0","EnsemblGenomes-Tr:EEB08137","UniProtKB/TrEMBL:B6K3T0","EnsemblGenomes-Gn:SJAG_03272","InterPro:IPR007062"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":44,"start":1}},{"range":{"end":178,"start":60}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gdh1","uniquename":"SJAG_03266"},{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"}],"genes_by_uniquename":{"HGNC:9288":null,"SJAG_03272":null,"SPAC17A5.09c":null,"YMR311C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein phosphatase inhibitor 2 (IPP-2)","id":"PF04979","interpro_description":"Protein phosphatase inhibitor 2 (IPP-2)","interpro_id":"IPR007062","interpro_name":"PPI-2","locations":[{"end":177,"start":43}],"match_end":177,"match_start":43,"name":"IPP-2"},{"dbname":"GENE3D","id":"G3DSA:6.10.250.1050","locations":[{"end":80,"start":1}],"match_end":80,"match_start":1},{"dbname":"PANTHER","id":"PTHR12398","interpro_description":"Protein phosphatase inhibitor 2 (IPP-2)","interpro_id":"IPR007062","interpro_name":"PPI-2","locations":[{"end":176,"start":1}],"match_end":176,"match_start":1,"name":"PROTEIN PHOSPHATASE INHIBITOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":44,"start":1},{"end":178,"start":60}],"match_end":178,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Glycine-rich","description":"consensus disorder prediction","id":"mobidb-lite-Glycine-rich","locations":[{"end":33,"start":22}],"match_end":33,"match_start":22,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":105,"start":76},{"end":178,"start":168}],"match_end":178,"match_start":76,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":154,"start":137}],"match_end":154,"match_start":137,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":761796,"start_pos":761260,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":32,"start":19}},{"range":{"end":106,"start":94}},{"range":{"end":146,"start":137}},{"range":{"end":177,"start":166}}],"name":"glc8","ortholog_annotations":[{"gene_uniquename":"SJAG_03272","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9288","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03272","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03272","ortholog_taxonid":4932,"ortholog_uniquename":"YMR311C","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein phosphatase PP1 regulatory subunit Glc8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004864"]}},"subset_termids":["GO:0023052","GO:0030234","GO:0098772","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004864":null,"GO:0005634":null,"GO:0005829":null,"GO:0035556":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03272.1"],"transcripts_by_uniquename":{"SJAG_03272.1":null},"uniprot_identifier":"B6K3T0","uniquename":"SJAG_03272"}


id: SJAG_03273
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[86869],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03273","EnsemblGenomes-Tr:EEB08138","UniProtKB/TrEMBL:B6K3T1","InterPro:IPR038910"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":73,"start":21}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tti1","uniquename":"SJAG_03267"},{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"}],"genes_by_uniquename":{"SJAG_03273":null,"SPAC17A5.10":null,"YGR268C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","id":"PTHR28031","interpro_description":"Proline-rich protein Hua1-like","interpro_id":"IPR038910","interpro_name":"Hua1-like","locations":[{"end":165,"start":1}],"match_end":165,"match_start":1,"name":"PROLINE-RICH PROTEIN HUA1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":73,"start":21}],"match_end":73,"match_start":21,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":762463,"start_pos":761801,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":94,"start":72}}],"name":"hua1","ortholog_annotations":[{"gene_uniquename":"SJAG_03273","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03273","ortholog_taxonid":4932,"ortholog_uniquename":"YGR268C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03273","ortholog_taxonid":4932,"ortholog_uniquename":"YGR268C","reference_uniquename":"PMID:26896847"}],"product":"conserved fungal protein, possibly DNA J domain, implicated in protein folding, Hua1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03273.1"],"transcripts_by_uniquename":{"SJAG_03273.1":null},"uniprot_identifier":"B6K3T1","uniquename":"SJAG_03273"}


id: SJAG_03275
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86888],"is_not":false,"summary":null,"term":"GO:0046656"},{"annotations":[86889],"is_not":false,"summary":null,"term":"GO:0006729"},{"annotations":[86890],"is_not":false,"summary":null,"term":"GO:0046654"}],"cellular_component":[{"annotations":[86886],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86887],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[86891],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[86892],"is_not":false,"summary":null,"term":"GO:0003934"},{"annotations":[86893],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03275","InterPro:IPR018234","InterPro:IPR001474","InterPro:IPR020602","GOA:B6K3T4","UniProtKB/TrEMBL:B6K3T4","EnsemblGenomes-Tr:EEB08141"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":27,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"}],"genes_by_uniquename":{"HGNC:4193":null,"SJAG_03275":null,"SPAC17A5.13":null,"YGR267C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GTP cyclohydrolase I","id":"PF01227","interpro_description":"GTP cyclohydrolase I domain","interpro_id":"IPR020602","interpro_name":"GTP_CycHdrlase_I_dom","locations":[{"end":231,"start":53}],"match_end":231,"match_start":53,"name":"GTP_cyclohydroI"},{"dbname":"CDD","description":"GTP_cyclohydro1","id":"cd00642","locations":[{"end":232,"start":48}],"match_end":232,"match_start":48,"name":"GTP_cyclohydro1"},{"dbname":"PROSITE_PATTERNS","description":"GTP cyclohydrolase I signature 2.","id":"PS00860","interpro_description":"GTP cyclohydrolase I, conserved site","interpro_id":"IPR018234","interpro_name":"GTP_CycHdrlase_I_CS","locations":[{"end":168,"start":158}],"match_end":168,"match_start":158,"name":"GTP_CYCLOHYDROL_1_2"},{"dbname":"PROSITE_PATTERNS","description":"GTP cyclohydrolase I signature 1.","id":"PS00859","interpro_description":"GTP cyclohydrolase I, conserved site","interpro_id":"IPR018234","interpro_name":"GTP_CycHdrlase_I_CS","locations":[{"end":126,"start":110}],"match_end":126,"match_start":110,"name":"GTP_CYCLOHYDROL_1_1"},{"dbname":"FUNFAM","description":"GTP cyclohydrolase 1","id":"G3DSA:1.10.286.10:FF:000003","locations":[{"end":98,"start":40}],"match_end":98,"match_start":40},{"dbname":"FUNFAM","description":"GTP cyclohydrolase 1","id":"G3DSA:3.30.1130.10:FF:000012","locations":[{"end":232,"start":101}],"match_end":232,"match_start":101},{"dbname":"SUPERFAMILY","id":"SSF55620","locations":[{"end":232,"start":41}],"match_end":232,"match_start":41,"name":"Tetrahydrobiopterin biosynthesis enzymes-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.286.10","interpro_description":"GTP cyclohydrolase I, N-terminal domain","interpro_id":"IPR043134","interpro_name":"GTP-CH-I_N","locations":[{"end":98,"start":39}],"match_end":98,"match_start":39},{"dbname":"GENE3D","id":"G3DSA:3.30.1130.10","interpro_description":"GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase","interpro_id":"IPR043133","interpro_name":"GTP-CH-I_C/QueF","locations":[{"end":233,"start":101}],"match_end":233,"match_start":101},{"dbname":"PANTHER","id":"PTHR11109","interpro_description":"GTP cyclohydrolase I","interpro_id":"IPR001474","interpro_name":"GTP_CycHdrlase_I","locations":[{"end":232,"start":38}],"match_end":232,"match_start":38,"name":"GTP CYCLOHYDROLASE I"},{"dbname":"HAMAP","description":"GTP cyclohydrolase 1 [folE].","id":"MF_00223","interpro_description":"GTP cyclohydrolase I","interpro_id":"IPR001474","interpro_name":"GTP_CycHdrlase_I","locations":[{"end":231,"start":49}],"match_end":231,"match_start":49,"name":"FolE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":27,"start":1}],"match_end":27,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":24,"start":11}],"match_end":24,"match_start":11,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"GTP cyclohydrolase I FolE","id":"TIGR00063","interpro_description":"GTP cyclohydrolase I","interpro_id":"IPR001474","interpro_name":"GTP_CycHdrlase_I","locations":[{"end":232,"start":53}],"match_end":232,"match_start":53,"name":"folE"}],"location":{"chromosome_name":"supercont5.2","end_pos":767294,"start_pos":766593,"strand":"forward"},"name":"fol2","ortholog_annotations":[{"gene_uniquename":"SJAG_03275","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4193","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03275","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03275","ortholog_taxonid":4932,"ortholog_uniquename":"YGR267C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03275","ortholog_taxonid":4932,"ortholog_uniquename":"YGR267C","reference_uniquename":"PMID:26896847"}],"product":"GTP cyclohydrolase Fol2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0005525","GO:0008270"],"NOT binding":["GO:0003934"]}},"subset_termids":["GO:0006766","GO:0042559","GO:0005829","GO:0005634","GO:0016810"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003934":null,"GO:0005525":null,"GO:0005634":null,"GO:0005829":null,"GO:0006729":null,"GO:0008270":null,"GO:0046654":null,"GO:0046656":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03275.1"],"transcripts_by_uniquename":{"SJAG_03275.1":null},"uniprot_identifier":"B6K3T4","uniquename":"SJAG_03275"}


id: SJAG_03276
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86899],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[86900],"is_not":false,"summary":null,"term":"GO:0016075"}],"cellular_component":[{"annotations":[86894],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[86895],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[86896],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86897],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86898],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[86901],"is_not":false,"summary":null,"term":"GO:0004534"},{"annotations":[86902],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[86903],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[86904],"is_not":false,"summary":null,"term":"GO:0004540"}]},"dbxrefs":["InterPro:IPR041106","InterPro:IPR040486","InterPro:IPR040992","InterPro:IPR041412","InterPro:IPR027073","EnsemblGenomes-Gn:SJAG_03276","InterPro:IPR041385","UniProtKB/TrEMBL:B6K3T5","InterPro:IPR004859","EnsemblGenomes-Tr:EEB08142","InterPro:IPR016494","GOA:B6K3T5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1322,"start":1215}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"}],"genes_by_uniquename":{"HGNC:30654":null,"SJAG_03276":null,"SPAC17A5.14":null,"YGL173C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Xrn1 helical domain","id":"PF17846","interpro_description":"Xrn1, helical domain","interpro_id":"IPR041412","interpro_name":"Xrn1_helical","locations":[{"end":666,"start":272}],"match_end":666,"match_start":272,"name":"XRN_M"},{"dbname":"PFAM","description":"Exoribonuclease Xrn1 D2/D3 domain","id":"PF18334","interpro_description":"Exoribonuclease Xrn1, D2/D3 domain","interpro_id":"IPR041106","interpro_name":"XRN1_D2_D3","locations":[{"end":1109,"start":893}],"match_end":1109,"match_start":893,"name":"XRN1_D2_D3"},{"dbname":"PFAM","description":"Xrn1 SH3-like domain","id":"PF18129","interpro_description":"5'-3' exoribonuclease 1, SH3-like domain","interpro_id":"IPR041385","interpro_name":"SH3_12","locations":[{"end":1197,"start":1131}],"match_end":1197,"match_start":1131,"name":"SH3_12"},{"dbname":"PFAM","description":"Exoribonuclease Xrn1 D1 domain","id":"PF18332","interpro_description":"5'-3' exoribonuclease 1, D1 domain","interpro_id":"IPR040992","interpro_name":"XRN1_D1","locations":[{"end":889,"start":705}],"match_end":889,"match_start":705,"name":"XRN1_D1"},{"dbname":"PFAM","description":"XRN 5'-3' exonuclease N-terminus","id":"PF03159","interpro_description":"Xrn1, N-terminal","interpro_id":"IPR004859","interpro_name":"Xrn1_N","locations":[{"end":226,"start":1}],"match_end":226,"match_start":1,"name":"XRN_N"},{"dbname":"CDD","description":"PIN_XRN1-2-like","id":"cd18673","locations":[{"end":257,"start":32}],"match_end":257,"match_start":32,"name":"PIN_XRN1-2-like"},{"dbname":"FUNFAM","description":"5'-3' exoribonuclease 2","id":"G3DSA:3.40.50.12390:FF:000005","locations":[{"end":306,"start":125}],"match_end":306,"match_start":125},{"dbname":"FUNFAM","description":"5'-3' exoribonuclease 1","id":"G3DSA:3.40.50.12390:FF:000004","locations":[{"end":124,"start":1}],"match_end":124,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:3.40.50.12390","locations":[{"end":289,"start":1}],"match_end":289,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:2.170.260.40","interpro_description":"5'-3' exoribonuclease 1, D1 domain superfamily","interpro_id":"IPR047007","interpro_name":"XRN1_D1_sf","locations":[{"end":889,"start":723}],"match_end":889,"match_start":723},{"dbname":"GENE3D","id":"G3DSA:1.25.40.1050","locations":[{"end":656,"start":560}],"match_end":656,"match_start":560},{"dbname":"GENE3D","id":"G3DSA:2.30.30.30","interpro_description":"Large ribosomal subunit protein uL2, domain 2","interpro_id":"IPR014722","interpro_name":"Rib_uL2_dom2","locations":[{"end":934,"start":890}],"match_end":934,"match_start":890},{"dbname":"GENE3D","id":"G3DSA:2.30.30.750","interpro_description":"5'-3' exoribonuclease 1, SH3-like domain superfamily","interpro_id":"IPR047008","interpro_name":"XRN1_SH3_sf","locations":[{"end":1218,"start":1113}],"match_end":1218,"match_start":1113},{"dbname":"PANTHER","id":"PTHR12341","interpro_description":"5'-3' exoribonuclease","interpro_id":"IPR027073","interpro_name":"5_3_exoribonuclease","locations":[{"end":1211,"start":1}],"match_end":1211,"match_start":1,"name":"5'->3' EXORIBONUCLEASE"},{"dbname":"PIRSF","id":"PIRSF006743","interpro_description":"5'-3' exoribonuclease 1","interpro_id":"IPR016494","interpro_name":"5_3_exoribonuclease_1","locations":[{"end":1322,"start":1}],"match_end":1322,"match_start":1,"name":"Exonuclease_Xnr1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1322,"start":1215}],"match_end":1322,"match_start":1215,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1288,"start":1277}],"match_end":1288,"match_start":1277,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":1322,"start":1296}],"match_end":1322,"match_start":1296,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":772064,"start_pos":767995,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":257,"start":245}},{"range":{"end":461,"start":450}},{"range":{"end":848,"start":831}},{"range":{"end":1307,"start":1288}}],"name":"exo2","ortholog_annotations":[{"gene_uniquename":"SJAG_03276","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30654","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03276","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03276","ortholog_taxonid":4932,"ortholog_uniquename":"YGL173C","reference_uniquename":"PMID:29761456"}],"product":"exonuclease II Exo2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0003723","GO:0000287"],"NOT binding":["GO:0004540","GO:0004534"]}},"subset_termids":["GO:0140098","GO:0010494","GO:0005829","GO:0005634","GO:0016788","GO:0000932","GO:0004527","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000184":null,"GO:0000287":null,"GO:0000932":null,"GO:0003723":null,"GO:0004534":null,"GO:0004540":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0010494":null,"GO:0016075":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03276.1"],"transcripts_by_uniquename":{"SJAG_03276.1":null},"uniprot_identifier":"B6K3T5","uniquename":"SJAG_03276"}


id: SJAG_03277
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86909],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[86910],"is_not":false,"summary":null,"term":"GO:0006424"}],"cellular_component":[{"annotations":[86905],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[86906],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86907],"is_not":false,"summary":null,"term":"GO:0017102"},{"annotations":[86908],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[86911],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[86912],"is_not":false,"summary":null,"term":"GO:0004818"}]},"dbxrefs":["InterPro:IPR014729","InterPro:IPR011035","InterPro:IPR001412","InterPro:IPR000924","EnsemblGenomes-Tr:EEB08143","InterPro:IPR004526","InterPro:IPR020058","UniProtKB/TrEMBL:B6K3T6","GOA:B6K3T6","EnsemblGenomes-Gn:SJAG_03277","InterPro:IPR020059","InterPro:IPR036282","InterPro:IPR020056"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"}],"genes_by_uniquename":{"HGNC:3418":null,"SJAG_03277":null,"SPAC17A5.15c":null,"YGL245W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA synthetases class I (E and Q), anti-codon binding domain","id":"PF03950","interpro_description":"Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain","interpro_id":"IPR020059","interpro_name":"Glu/Gln-tRNA-synth_Ib_codon-bd","locations":[{"end":606,"start":513}],"match_end":606,"match_start":513,"name":"tRNA-synt_1c_C"},{"dbname":"PFAM","description":"tRNA synthetases class I (E and Q), anti-codon binding domain","id":"PF20974","interpro_description":"tRNA synthetases class I (E and Q), anti-codon binding domain","interpro_id":"IPR049437","interpro_name":"tRNA-synt_1c_C2","locations":[{"end":691,"start":618}],"match_end":691,"match_start":618,"name":"tRNA-synt_1c_C2"},{"dbname":"PFAM","description":"tRNA synthetases class I (E and Q), catalytic domain","id":"PF00749","interpro_description":"Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain","interpro_id":"IPR020058","interpro_name":"Glu/Gln-tRNA-synth_Ib_cat-dom","locations":[{"end":510,"start":206}],"match_end":510,"match_start":206,"name":"tRNA-synt_1c"},{"dbname":"CDD","description":"GlnRS_core","id":"cd00807","locations":[{"end":515,"start":206}],"match_end":515,"match_start":206,"name":"GlnRS_core"},{"dbname":"PROSITE_PATTERNS","description":"Aminoacyl-transfer RNA synthetases class-I signature.","id":"PS00178","interpro_description":"Aminoacyl-tRNA synthetase, class I, conserved site","interpro_id":"IPR001412","interpro_name":"aa-tRNA-synth_I_CS","locations":[{"end":224,"start":213}],"match_end":224,"match_start":213,"name":"AA_TRNA_LIGASE_I"},{"dbname":"PRINTS","description":"Glutamyl-tRNA synthetase signature","id":"PR00987","interpro_description":"Glutamyl/glutaminyl-tRNA synthetase","interpro_id":"IPR000924","interpro_name":"Glu/Gln-tRNA-synth","locations":[{"end":222,"start":210},{"end":235,"start":224},{"end":252,"start":239},{"end":394,"start":384},{"end":408,"start":400}],"match_end":408,"match_start":210,"name":"TRNASYNTHGLU"},{"dbname":"FUNFAM","description":"Glutamyl-tRNA synthetase, cytoplasmic","id":"G3DSA:2.40.240.10:FF:000004","locations":[{"end":703,"start":624}],"match_end":703,"match_start":624},{"dbname":"FUNFAM","description":"Glutamine--tRNA ligase","id":"G3DSA:3.90.800.10:FF:000001","locations":[{"end":383,"start":279}],"match_end":383,"match_start":279},{"dbname":"FUNFAM","description":"Bifunctional glutamate/proline--tRNA ligase","id":"G3DSA:3.40.50.620:FF:000070","locations":[{"end":516,"start":179}],"match_end":516,"match_start":179},{"dbname":"FUNFAM","description":"Glutamine--tRNA ligase","id":"G3DSA:1.10.1160.10:FF:000001","locations":[{"end":511,"start":434}],"match_end":511,"match_start":434},{"dbname":"SUPERFAMILY","id":"SSF50715","interpro_description":"Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily","interpro_id":"IPR011035","interpro_name":"Ribosomal_bL25/Gln-tRNA_synth","locations":[{"end":708,"start":513}],"match_end":708,"match_start":513,"name":"Ribosomal protein L25-like"},{"dbname":"SUPERFAMILY","id":"SSF52374","locations":[{"end":519,"start":206}],"match_end":519,"match_start":206,"name":"Nucleotidylyl transferase"},{"dbname":"SUPERFAMILY","id":"SSF47616","interpro_description":"Glutathione S-transferase, C-terminal domain superfamily","interpro_id":"IPR036282","interpro_name":"Glutathione-S-Trfase_C_sf","locations":[{"end":168,"start":81}],"match_end":168,"match_start":81,"name":"GST C-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1050.10","locations":[{"end":167,"start":77}],"match_end":167,"match_start":77},{"dbname":"GENE3D","id":"G3DSA:1.10.1160.10","interpro_description":"Glutamine-tRNA ligase, alpha-bundle domain superfamily","interpro_id":"IPR020061","interpro_name":"Glu_tRNA_lig_a-bdl","locations":[{"end":511,"start":434}],"match_end":511,"match_start":434},{"dbname":"GENE3D","id":"G3DSA:3.90.800.10","locations":[{"end":383,"start":279}],"match_end":383,"match_start":279},{"dbname":"GENE3D","id":"G3DSA:2.40.240.10","interpro_description":"Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal","interpro_id":"IPR020056","interpro_name":"Rbsml_bL25/Gln-tRNA_synth_N","locations":[{"end":705,"start":626}],"match_end":705,"match_start":626,"name":"Ribosomal Protein L25; Chain P"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.620","interpro_description":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_id":"IPR014729","interpro_name":"Rossmann-like_a/b/a_fold","locations":[{"end":278,"start":207},{"end":421,"start":385}],"match_end":421,"match_start":207,"name":"HUPs"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.70","locations":[{"end":76,"start":4},{"end":188,"start":168}],"match_end":188,"match_start":4},{"dbname":"PANTHER","id":"PTHR43097","interpro_description":"Glutamine/Glutamate--tRNA Ligase","interpro_id":"IPR050132","interpro_name":"Gln/Glu-tRNA_Ligase","locations":[{"end":709,"start":97}],"match_end":709,"match_start":97,"name":"GLUTAMINE-TRNA LIGASE"},{"dbname":"HAMAP","description":"Glutamate--tRNA ligase [gltX].","id":"MF_02076","interpro_description":"Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic","interpro_id":"IPR004526","interpro_name":"Glu-tRNA-synth_arc/euk","locations":[{"end":703,"start":87}],"match_end":703,"match_start":87,"name":"Glu_tRNA_synth_type2"},{"dbname":"NCBIFAM","description":"glutamate--tRNA ligase","id":"TIGR00463","interpro_description":"Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic","interpro_id":"IPR004526","interpro_name":"Glu-tRNA-synth_arc/euk","locations":[{"end":702,"start":119}],"match_end":702,"match_start":119,"name":"gltX_arch"}],"location":{"chromosome_name":"supercont5.2","end_pos":774452,"start_pos":772299,"strand":"reverse"},"name":"gus1","ortholog_annotations":[{"gene_uniquename":"SJAG_03277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3418","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03277","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03277","ortholog_taxonid":4932,"ortholog_uniquename":"YGL245W","reference_uniquename":"PMID:29761456"}],"product":"cytoplasmic glutamate-tRNA ligase Gus1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0005524"],"NOT binding":["GO:0004818"]}},"subset_termids":["GO:0002181","GO:0010494","GO:0006399","GO:0006520","GO:0140101","GO:0140098","GO:0005829","GO:0005634","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0004818":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0006424":null,"GO:0010494":null,"GO:0017102":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03277.1"],"transcripts_by_uniquename":{"SJAG_03277.1":null},"uniprot_identifier":"B6K3T6","uniquename":"SJAG_03277"}


id: SJAG_03278
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[86913],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[86914],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86915],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[86916],"is_not":false,"summary":null,"term":"GO:0005797"},{"annotations":[86917],"is_not":false,"summary":null,"term":"GO:0000138"},{"annotations":[86918],"is_not":false,"summary":null,"term":"GO:0016020"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03278","UniProtKB/TrEMBL:B6K3T7","EnsemblGenomes-Tr:EEB08144","InterPro:IPR026705"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":178,"start":158}},{"range":{"end":671,"start":628}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"}],"genes_by_uniquename":{"HGNC:15736":null,"SJAG_03278":null,"SPAC17A5.16":null,"YLR436C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"High-temperature-induced dauer-formation protein","id":"PF12722","interpro_description":"Hid-1/Ecm30","interpro_id":"IPR026705","interpro_name":"Hid-1/Ecm30","locations":[{"end":832,"start":1}],"match_end":832,"match_start":1,"name":"Hid1"},{"dbname":"PANTHER","id":"PTHR21575","interpro_description":"Hid-1/Ecm30","interpro_id":"IPR026705","interpro_name":"Hid-1/Ecm30","locations":[{"end":832,"start":1}],"match_end":832,"match_start":1,"name":"PROTEIN HID1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":178,"start":158},{"end":671,"start":628}],"match_end":671,"match_start":158,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":671,"start":660}],"match_end":671,"match_start":660,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":178,"start":165}],"match_end":178,"match_start":165,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":778283,"start_pos":775085,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":104,"start":93}},{"range":{"end":198,"start":185}},{"range":{"end":230,"start":215}},{"range":{"end":323,"start":311}},{"range":{"end":677,"start":659}}],"name":"ftp105","ortholog_annotations":[{"gene_uniquename":"SJAG_03278","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15736","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03278","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03278","ortholog_taxonid":4932,"ortholog_uniquename":"YLR436C","reference_uniquename":"PMID:29761456"}],"product":"Golgi localized protein, human HID1 ortholog 3, implicated in vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000138":null,"GO:0005737":null,"GO:0005794":null,"GO:0005797":null,"GO:0005829":null,"GO:0016020":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03278.1"],"transcripts_by_uniquename":{"SJAG_03278.1":null},"uniprot_identifier":"B6K3T7","uniquename":"SJAG_03278"}


id: SJAG_03279
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86058],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[86059],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[86053],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[86054],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86055],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86056],"is_not":false,"summary":null,"term":"GO:0034715"},{"annotations":[86057],"is_not":false,"summary":null,"term":"GO:0005681"}]},"dbxrefs":["GOA:B6K3T8","EnsemblGenomes-Gn:SJAG_03279","InterPro:IPR039924","UniProtKB/TrEMBL:B6K3T8","EnsemblGenomes-Tr:EEB08145","InterPro:IPR011993"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":164,"start":142}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"}],"genes_by_uniquename":{"HGNC:2080":null,"SJAG_03279":null,"SPAC1610.01":null,"YKL183W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Regulator of volume decrease after cellular swelling","id":"PF03517","interpro_description":"Protein ICln/Lot5/Saf5","interpro_id":"IPR039924","interpro_name":"ICln/Lot5/Saf5","locations":[{"end":156,"start":56}],"match_end":156,"match_start":56,"name":"Voldacs"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":149,"start":19}],"match_end":149,"match_start":19},{"dbname":"PANTHER","id":"PTHR21399","interpro_description":"Protein ICln/Lot5/Saf5","interpro_id":"IPR039924","interpro_name":"ICln/Lot5/Saf5","locations":[{"end":170,"start":18}],"match_end":170,"match_start":18,"name":"CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":164,"start":142}],"match_end":164,"match_start":142,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":780260,"start_pos":779679,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":122,"start":106}}],"name":"saf5","ortholog_annotations":[{"gene_uniquename":"SJAG_03279","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2080","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03279","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03279","ortholog_taxonid":4932,"ortholog_uniquename":"YKL183W","reference_uniquename":"PMID:29761456"}],"product":"methylosome subunit pICln, Saf5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0016071","GO:0005634","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0005634":null,"GO:0005681":null,"GO:0005737":null,"GO:0005829":null,"GO:0034715":null,"GO:0045292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03279.1"],"transcripts_by_uniquename":{"SJAG_03279.1":null},"uniprot_identifier":"B6K3T8","uniquename":"SJAG_03279"}


id: SJAG_03280
data:
  {"cv_annotations":{"biological_process":[{"annotations":[83975],"is_not":false,"summary":null,"term":"GO:0006491"}],"cellular_component":[{"annotations":[83973],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[83974],"is_not":false,"summary":null,"term":"GO:0017177"}],"molecular_function":[{"annotations":[83976],"is_not":false,"summary":null,"term":"GO:0030246"},{"annotations":[83977],"is_not":false,"summary":null,"term":"GO:0106407"}]},"dbxrefs":["InterPro:IPR025887","InterPro:IPR011013","UniProtKB/TrEMBL:B6K3T9","EnsemblGenomes-Tr:EEB08146","GOA:B6K3T9","InterPro:IPR013780","InterPro:IPR017853","EnsemblGenomes-Gn:SJAG_03280","InterPro:IPR000322"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"}],"genes_by_uniquename":{"HGNC:4138":null,"SJAG_03280":null,"SPAC1002.03c":null,"YBR229C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl hydrolases family 31 TIM-barrel domain","id":"PF01055","interpro_description":"Glycoside hydrolase family 31, TIM barrel domain","interpro_id":"IPR000322","interpro_name":"Glyco_hydro_31_TIM","locations":[{"end":704,"start":377}],"match_end":704,"match_start":377,"name":"Glyco_hydro_31_2nd"},{"dbname":"PFAM","description":"Glycosyl hydrolase family 31 C-terminal domain","id":"PF21365","interpro_description":"Glycosyl hydrolase family 31, C-terminal domain","interpro_id":"IPR048395","interpro_name":"Glyco_hydro_31_C","locations":[{"end":801,"start":712}],"match_end":801,"match_start":712,"name":"Glyco_hydro_31_3rd"},{"dbname":"PFAM","description":"Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain","id":"PF13802","interpro_description":"Glycoside hydrolase family 31, N-terminal domain","interpro_id":"IPR025887","interpro_name":"Glyco_hydro_31_N_dom","locations":[{"end":327,"start":100}],"match_end":327,"match_start":100,"name":"Gal_mutarotas_2"},{"dbname":"CDD","description":"GH31_GANC_GANAB_alpha","id":"cd06603","locations":[{"end":844,"start":375}],"match_end":844,"match_start":375,"name":"GH31_GANC_GANAB_alpha"},{"dbname":"CDD","description":"GH31_N","id":"cd14752","locations":[{"end":373,"start":252}],"match_end":373,"match_start":252,"name":"GH31_N"},{"dbname":"PROSITE_PROFILES","description":"Prokaryotic membrane lipoprotein lipid attachment site profile.","id":"PS51257","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"PROKAR_LIPOPROTEIN"},{"dbname":"SUPERFAMILY","id":"SSF74650","interpro_description":"Galactose mutarotase-like domain superfamily","interpro_id":"IPR011013","interpro_name":"Gal_mutarotase_sf_dom","locations":[{"end":361,"start":87}],"match_end":361,"match_start":87,"name":"Galactose mutarotase-like"},{"dbname":"SUPERFAMILY","id":"SSF51011","locations":[{"end":797,"start":714}],"match_end":797,"match_start":714,"name":"Glycosyl hydrolase domain"},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":712,"start":365}],"match_end":712,"match_start":365,"name":"(Trans)glycosidases"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1180","interpro_description":"Glycosyl hydrolase, all-beta","interpro_id":"IPR013780","interpro_name":"Glyco_hydro_b","locations":[{"end":918,"start":697}],"match_end":918,"match_start":697},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":696,"start":377}],"match_end":696,"match_start":377,"name":"Glycosidases"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1760","locations":[{"end":375,"start":209}],"match_end":375,"match_start":209,"name":"glycosyl hydrolase (family 31)"},{"dbname":"PANTHER","id":"PTHR22762","locations":[{"end":899,"start":18}],"match_end":899,"match_start":18,"name":"ALPHA-GLUCOSIDASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":783633,"start_pos":780838,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":697,"start":686}}],"name":"gls2","ortholog_annotations":[{"gene_uniquename":"SJAG_03280","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4138","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03280","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03280","ortholog_taxonid":4932,"ortholog_uniquename":"YBR229C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03280","ortholog_taxonid":4932,"ortholog_uniquename":"YBR229C","reference_uniquename":"PMID:26896847"}],"product":"glucosidase II alpha subunit Gls2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0030246"],"NOT binding":["GO:0106407"]}},"subset_termids":["GO:0005783","GO:0016798"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0006491":null,"GO:0017177":null,"GO:0030246":null,"GO:0106407":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03280.1"],"transcripts_by_uniquename":{"SJAG_03280.1":null},"uniprot_identifier":"B6K3T9","uniquename":"SJAG_03280"}


id: SJAG_03281
data:
  {"cv_annotations":{"biological_process":[{"annotations":[83972],"is_not":false,"summary":null,"term":"GO:0006913"}],"cellular_component":[{"annotations":[83970],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[83971],"is_not":false,"summary":null,"term":"GO:1990578"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03281","EnsemblGenomes-Tr:EEB08147","GOA:B6K3U0","InterPro:IPR012578","UniProtKB/TrEMBL:B6K3U0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":96,"start":68}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"}],"genes_by_uniquename":{"SJAG_03281":null,"SPAC1002.02":null,"YLR018C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nuclear pore complex component","id":"PF08058","interpro_description":"Nuclear pore complex component","interpro_id":"IPR012578","interpro_name":"Nucl_pore_cmplx","locations":[{"end":248,"start":125}],"match_end":248,"match_start":125,"name":"NPCC"},{"dbname":"PANTHER","id":"PTHR28003","interpro_description":"Nuclear pore complex component","interpro_id":"IPR012578","interpro_name":"Nucl_pore_cmplx","locations":[{"end":224,"start":178}],"match_end":224,"match_start":178,"name":"NUCLEOPORIN POM34"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":96,"start":68}],"match_end":96,"match_start":68,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":784666,"start_pos":783914,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":37,"start":20}}],"name":"pom34","ortholog_annotations":[{"gene_uniquename":"SJAG_03281","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03281","ortholog_taxonid":4932,"ortholog_uniquename":"YLR018C","reference_uniquename":"PMID:29761456"}],"product":"nucleoporin Pom34","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0006913","GO:0005789","GO:0005783","GO:0005643"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005643":null,"GO:0006913":null,"GO:1990578":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":197,"start":175}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03281.1"],"transcripts_by_uniquename":{"SJAG_03281.1":null},"uniprot_identifier":"B6K3U0","uniquename":"SJAG_03281"}


id: SJAG_03282
data:
  {"coiled_coil_coords":[{"range":{"end":498,"start":478}}],"cv_annotations":{"biological_process":[{"annotations":[86079],"is_not":false,"summary":null,"term":"GO:0042407"}],"cellular_component":[{"annotations":[86076],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[86077],"is_not":false,"summary":null,"term":"GO:0044284"},{"annotations":[86078],"is_not":false,"summary":null,"term":"GO:0005739"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08148","GOA:B6K3U1","UniProtKB/TrEMBL:B6K3U1","EnsemblGenomes-Gn:SJAG_03282"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"}],"genes_by_uniquename":{"SJAG_03282":null,"SPAC1610.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":498,"start":478}],"match_end":498,"match_start":478,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":787165,"start_pos":785624,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":286,"start":275}}],"name":"mmc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03282","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.04","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial MICOS interactor required for cristae morphology Mmc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0061024","GO:0007005","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0042407":null,"GO:0044284":null,"GO:0099617":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":445,"start":423}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03282.1"],"transcripts_by_uniquename":{"SJAG_03282.1":null},"uniprot_identifier":"B6K3U1","uniquename":"SJAG_03282"}


id: SJAG_03283
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86069],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[86070],"is_not":false,"summary":null,"term":"GO:0048255"},{"annotations":[86071],"is_not":false,"summary":null,"term":"GO:1902373"}],"cellular_component":[{"annotations":[86064],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[86065],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[86066],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86067],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86068],"is_not":false,"summary":null,"term":"GO:1990904"}],"molecular_function":[{"annotations":[86072],"is_not":false,"summary":null,"term":"GO:0003730"},{"annotations":[86073],"is_not":false,"summary":null,"term":"GO:0008143"},{"annotations":[86074],"is_not":false,"summary":null,"term":"GO:0008266"},{"annotations":[86075],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR000504","InterPro:IPR035979","EnsemblGenomes-Tr:EEB08149","UniProtKB/TrEMBL:B6K3U2","EnsemblGenomes-Gn:SJAG_03283","InterPro:IPR012677","GOA:B6K3U2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":189,"start":167}},{"range":{"end":580,"start":544}},{"range":{"end":688,"start":656}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"}],"genes_by_uniquename":{"SJAG_03283":null,"SPAC1610.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":101,"start":20},{"end":275,"start":211},{"end":423,"start":352}],"match_end":423,"match_start":20,"name":"RRM_1"},{"dbname":"CDD","description":"RRM2_Crp79_Mug28","id":"cd21621","locations":[{"end":282,"start":209}],"match_end":282,"match_start":209,"name":"RRM2_Crp79_Mug28"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":104,"start":18},{"end":284,"start":207},{"end":430,"start":350}],"match_end":430,"match_start":18,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":104,"start":19},{"end":280,"start":208},{"end":426,"start":351}],"match_end":426,"match_start":19,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":109,"start":8},{"end":286,"start":197},{"end":439,"start":337}],"match_end":439,"match_start":8,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":112,"start":6},{"end":288,"start":200},{"end":438,"start":319}],"match_end":438,"match_start":6},{"dbname":"PANTHER","id":"PTHR48025","interpro_description":"Eukaryotic RNA-binding","interpro_id":"IPR050502","interpro_name":"Euk_RNA-bind_prot","locations":[{"end":105,"start":10}],"match_end":105,"match_start":10,"name":"OS02G0815200 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":189,"start":167},{"end":580,"start":544},{"end":688,"start":656}],"match_end":688,"match_start":167,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":189,"start":175},{"end":553,"start":544},{"end":580,"start":568},{"end":688,"start":667}],"match_end":688,"match_start":175,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":567,"start":558}],"match_end":567,"match_start":558,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":790061,"start_pos":787774,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":478,"start":463}},{"range":{"end":615,"start":605}}],"name":"crp79","ortholog_annotations":[{"gene_uniquename":"SJAG_03283","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.03c","reference_uniquename":"PMID:21511999"}],"product":"poly(A) binding protein Crp79","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0008266","GO:0008143","GO:0003723","GO:0003730"]}},"subset_termids":["GO:0016071","GO:0006913","GO:0005829","GO:0010494","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0003730":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006406":null,"GO:0008143":null,"GO:0008266":null,"GO:0010494":null,"GO:0048255":null,"GO:1902373":null,"GO:1990904":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03283.1"],"transcripts_by_uniquename":{"SJAG_03283.1":null},"uniprot_identifier":"B6K3U2","uniquename":"SJAG_03283"}


id: SJAG_03284
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86061],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[86060],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[86062],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[86063],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR002143","GOA:B6K3U3","InterPro:IPR023674","InterPro:IPR028364","EnsemblGenomes-Gn:SJAG_03284","UniProtKB/TrEMBL:B6K3U3","EnsemblGenomes-Tr:EEB08150","InterPro:IPR016095"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"saf5","uniquename":"SJAG_03279"},{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"}],"genes_by_uniquename":{"HGNC:14275":null,"SJAG_03284":null,"SPAC1610.02c":null,"YDR116C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L1p/L10e family","id":"PF00687","interpro_description":"Ribosomal protein uL1/ribosomal biogenesis protein","interpro_id":"IPR028364","interpro_name":"Ribosomal_uL1/biogenesis","locations":[{"end":232,"start":55}],"match_end":232,"match_start":55,"name":"Ribosomal_L1"},{"dbname":"CDD","description":"Ribosomal_L1","id":"cd00403","interpro_description":"Ribosomal protein uL1/ribosomal biogenesis protein","interpro_id":"IPR028364","interpro_name":"Ribosomal_uL1/biogenesis","locations":[{"end":237,"start":39}],"match_end":237,"match_start":39,"name":"Ribosomal_L1"},{"dbname":"FUNFAM","description":"50S ribosomal protein L1","id":"G3DSA:3.40.50.790:FF:000001","locations":[{"end":172,"start":81}],"match_end":172,"match_start":81},{"dbname":"SUPERFAMILY","id":"SSF56808","interpro_description":"Ribosomal protein uL1-like","interpro_id":"IPR023674","interpro_name":"Ribosomal_uL1-like","locations":[{"end":237,"start":31}],"match_end":237,"match_start":31,"name":"Ribosomal protein L1"},{"dbname":"GENE3D","id":"G3DSA:3.30.190.20","locations":[{"end":80,"start":39},{"end":236,"start":172}],"match_end":236,"match_start":39},{"dbname":"GENE3D","id":"G3DSA:3.40.50.790","interpro_description":"Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain","interpro_id":"IPR016095","interpro_name":"Ribosomal_uL1_3-a/b-sand","locations":[{"end":171,"start":81}],"match_end":171,"match_start":81},{"dbname":"PANTHER","id":"PTHR36427","locations":[{"end":237,"start":28}],"match_end":237,"match_start":28,"name":"54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL"},{"dbname":"PIRSF","id":"PIRSF002155","interpro_description":"Large ribosomal subunit protein uL1","interpro_id":"IPR002143","interpro_name":"Ribosomal_uL1","locations":[{"end":238,"start":21}],"match_end":238,"match_start":21,"name":"RPL1p_RPL1a_RPL10e_RPL1o"}],"location":{"chromosome_name":"supercont5.2","end_pos":791131,"start_pos":790409,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":104,"start":91}}],"name":"mrpl1","ortholog_annotations":[{"gene_uniquename":"SJAG_03284","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14275","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03284","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1610.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03284","ortholog_taxonid":4932,"ortholog_uniquename":"YDR116C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03284","ortholog_taxonid":4932,"ortholog_uniquename":"YDR116C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0003723"],"NOT binding":["GO:0003735"]}},"subset_termids":["GO:0140053","GO:0005739","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03284.1"],"transcripts_by_uniquename":{"SJAG_03284.1":null},"uniprot_identifier":"B6K3U3","uniquename":"SJAG_03284"}


id: SJAG_03285
data:
  {"cv_annotations":{"biological_process":[{"annotations":[83982],"is_not":false,"summary":null,"term":"GO:0051123"},{"annotations":[83983],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[83978],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[83979],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[83980],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[83981],"is_not":false,"summary":null,"term":"GO:0005669"}],"molecular_function":[{"annotations":[83984],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03285","EnsemblGenomes-Tr:EEB08151","GOA:B6K3U4","InterPro:IPR006809","InterPro:IPR009072","UniProtKB/TrEMBL:B6K3U4"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":74,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gls2","uniquename":"SJAG_03280"},{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"}],"genes_by_uniquename":{"HGNC:11544":null,"SJAG_03285":null,"SPAC1002.04c":null,"YML015C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"hTAFII28-like protein conserved region","id":"PF04719","interpro_description":"TAFII28-like protein domain","interpro_id":"IPR006809","interpro_name":"TAFII28_dom","locations":[{"end":183,"start":99}],"match_end":183,"match_start":99,"name":"TAFII28"},{"dbname":"CDD","description":"TAF11","id":"cd08048","interpro_description":"TAFII28-like protein domain","interpro_id":"IPR006809","interpro_name":"TAFII28_dom","locations":[{"end":185,"start":103}],"match_end":185,"match_start":103,"name":"TAF11"},{"dbname":"FUNFAM","description":"TFIID subunit","id":"G3DSA:1.10.20.10:FF:000061","locations":[{"end":191,"start":103}],"match_end":191,"match_start":103},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":187,"start":103}],"match_end":187,"match_start":103,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":191,"start":103}],"match_end":191,"match_start":103,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR13218","interpro_description":"Transcription initiation factor TFIID subunit 11-like","interpro_id":"IPR045127","interpro_name":"TAF11-like","locations":[{"end":201,"start":38}],"match_end":201,"match_start":38,"name":"TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":74,"start":1}],"match_end":74,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":49,"start":8}],"match_end":49,"match_start":8,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":791938,"start_pos":791330,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":65,"start":53}},{"range":{"end":128,"start":116}}],"name":"taf11","ortholog_annotations":[{"gene_uniquename":"SJAG_03285","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11544","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03285","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03285","ortholog_taxonid":4932,"ortholog_uniquename":"YML015C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03285","ortholog_taxonid":4932,"ortholog_uniquename":"YML015C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIID complex subunit Taf11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0016251"]}},"subset_termids":["GO:0140223","GO:0005829","GO:0005634","GO:0005694","GO:0065003","GO:0005654","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005634":null,"GO:0005669":null,"GO:0005829":null,"GO:0006367":null,"GO:0016251":null,"GO:0051123":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03285.1"],"transcripts_by_uniquename":{"SJAG_03285.1":null},"uniprot_identifier":"B6K3U4","uniquename":"SJAG_03285"}


id: SJAG_03286
data:
  {"cv_annotations":{"biological_process":[{"annotations":[83987],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[83988],"is_not":false,"summary":null,"term":"GO:0006355"}],"cellular_component":[{"annotations":[83985],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[83986],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[83989],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[83990],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[83991],"is_not":false,"summary":null,"term":"GO:0032453"},{"annotations":[83992],"is_not":false,"summary":null,"term":"GO:0034647"},{"annotations":[83993],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR003349","EnsemblGenomes-Gn:SJAG_03286","InterPro:IPR003347","UniProtKB/TrEMBL:B6K3U5","InterPro:IPR036431","GOA:B6K3U5","EnsemblGenomes-Tr:EEB08152","InterPro:IPR001606","InterPro:IPR004198"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pom34","uniquename":"SJAG_03281"},{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"}],"genes_by_uniquename":{"HGNC:11114":null,"HGNC:11115":null,"HGNC:18039":null,"HGNC:9886":null,"SJAG_03286":null,"SPAC1002.05c":null,"YJR119C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ARID/BRIGHT DNA binding domain","id":"PF01388","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":183,"start":100}],"match_end":183,"match_start":100,"name":"ARID"},{"dbname":"PFAM","description":"jmjN domain","id":"PF02375","interpro_description":"JmjN domain","interpro_id":"IPR003349","interpro_name":"JmjN","locations":[{"end":64,"start":31}],"match_end":64,"match_start":31,"name":"JmjN"},{"dbname":"PFAM","description":"C5HC2 zinc finger","id":"PF02928","interpro_description":"Zinc finger, C5HC2-type","interpro_id":"IPR004198","interpro_name":"Znf_C5HC2","locations":[{"end":616,"start":572}],"match_end":616,"match_start":572,"name":"zf-C5HC2"},{"dbname":"PFAM","description":"JmjC domain, hydroxylase","id":"PF02373","interpro_description":"JmjC domain","interpro_id":"IPR003347","interpro_name":"JmjC_dom","locations":[{"end":485,"start":369}],"match_end":485,"match_start":369,"name":"JmjC"},{"dbname":"PROSITE_PROFILES","description":"JmjN domain profile.","id":"PS51183","interpro_description":"JmjN domain","interpro_id":"IPR003349","interpro_name":"JmjN","locations":[{"end":71,"start":30}],"match_end":71,"match_start":30,"name":"JMJN"},{"dbname":"PROSITE_PROFILES","description":"JmjC domain profile.","id":"PS51184","interpro_description":"JmjC domain","interpro_id":"IPR003347","interpro_name":"JmjC_dom","locations":[{"end":502,"start":336}],"match_end":502,"match_start":336,"name":"JMJC"},{"dbname":"PROSITE_PROFILES","description":"ARID domain profile.","id":"PS51011","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":187,"start":95}],"match_end":187,"match_start":95,"name":"ARID"},{"dbname":"SMART","id":"SM00558","interpro_description":"JmjC domain","interpro_id":"IPR003347","interpro_name":"JmjC_dom","locations":[{"end":502,"start":336}],"match_end":502,"match_start":336,"name":"cupin_9"},{"dbname":"SMART","id":"SM00501","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":188,"start":96}],"match_end":188,"match_start":96,"name":"bright_3"},{"dbname":"SMART","id":"SM00545","interpro_description":"JmjN domain","interpro_id":"IPR003349","interpro_name":"JmjN","locations":[{"end":70,"start":29}],"match_end":70,"match_start":29,"name":"JmjN_1"},{"dbname":"SUPERFAMILY","id":"SSF46774","interpro_description":"ARID DNA-binding domain superfamily","interpro_id":"IPR036431","interpro_name":"ARID_dom_sf","locations":[{"end":193,"start":76}],"match_end":193,"match_start":76,"name":"ARID-like"},{"dbname":"SUPERFAMILY","id":"SSF51197","locations":[{"end":525,"start":325}],"match_end":525,"match_start":325,"name":"Clavaminate synthase-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.150.60","interpro_description":"ARID DNA-binding domain superfamily","interpro_id":"IPR036431","interpro_name":"ARID_dom_sf","locations":[{"end":191,"start":97}],"match_end":191,"match_start":97},{"dbname":"GENE3D","id":"G3DSA:2.60.120.650","locations":[{"end":96,"start":15},{"end":486,"start":255}],"match_end":486,"match_start":15,"name":"Cupin"},{"dbname":"PANTHER","id":"PTHR10694","locations":[{"end":615,"start":26}],"match_end":615,"match_start":26,"name":"LYSINE-SPECIFIC DEMETHYLASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":794032,"start_pos":792134,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":278,"start":269}},{"range":{"end":420,"start":409}}],"name":"jmj2","ortholog_annotations":[{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11114","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11115","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18039","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9886","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":4932,"ortholog_uniquename":"YJR119C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03286","ortholog_taxonid":4932,"ortholog_uniquename":"YJR119C","reference_uniquename":"PMID:26896847"}],"product":"histone demethylase Jmj2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0003677","GO:0008270"],"NOT binding":["GO:0051864","GO:0032453","GO:0034647"]}},"subset_termids":["GO:0006355","GO:0032452","GO:0005634","GO:0006351","GO:0006325","GO:0016491","GO:0140096","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003677":null,"GO:0005634":null,"GO:0006338":null,"GO:0006355":null,"GO:0008270":null,"GO:0032453":null,"GO:0034647":null,"GO:0051864":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03286.1"],"transcripts_by_uniquename":{"SJAG_03286.1":null},"uniprot_identifier":"B6K3U5","uniquename":"SJAG_03286"}


id: SJAG_03287
data:
  {"cv_annotations":{"biological_process":[{"annotations":[83998],"is_not":false,"summary":null,"term":"GO:0032121"},{"annotations":[83999],"is_not":false,"summary":null,"term":"GO:0045141"}],"cellular_component":[{"annotations":[83994],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[83995],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[83996],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[83997],"is_not":false,"summary":null,"term":"GO:0110092"}],"molecular_function":[{"annotations":[115674],"is_not":false,"summary":null,"term":"GO:0005515"},{"annotations":[84000,84001],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08153","UniProtKB/TrEMBL:B6K3U6","GOA:B6K3U6","EnsemblGenomes-Gn:SJAG_03287"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:23337086","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mmc1","uniquename":"SJAG_03282"},{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"}],"genes_by_uniquename":{"SJAG_03287":null,"SJAG_05260":null,"SPAC1002.06c":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.2","end_pos":794815,"start_pos":794323,"strand":"reverse"},"name":"bqt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03287","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.06c","reference_uniquename":"PMID:21511999"}],"physical_interactions":[{"evidence":"Co-purification","gene_uniquename":"SJAG_03287","interactor_uniquename":"SJAG_05260","reference_uniquename":"PMID:23337086","throughput":"low"}],"product":"bouquet formation protein Bqt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23337086":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0005515"],"NOT binding":["GO:0030674"]}},"subset_termids":["GO:0005634","GO:0060090","GO:0140013","GO:0005816","GO:0005694","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005515":null,"GO:0030674":null,"GO:0032121":null,"GO:0035974":null,"GO:0044732":null,"GO:0045141":null,"GO:0110092":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03287.1"],"transcripts_by_uniquename":{"SJAG_03287.1":null},"uniprot_identifier":"B6K3U6","uniquename":"SJAG_03287"}


id: SJAG_03288
data:
  {"coiled_coil_coords":[{"range":{"end":47,"start":27}}],"cv_annotations":{"biological_process":[{"annotations":[84004],"is_not":false,"summary":null,"term":"GO:0070458"},{"annotations":[84005],"is_not":false,"summary":null,"term":"GO:0046416"},{"annotations":[84006],"is_not":false,"summary":null,"term":"GO:0009447"}],"cellular_component":[{"annotations":[84002],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84003],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84007],"is_not":false,"summary":null,"term":"GO:0004145"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08154","EnsemblGenomes-Gn:SJAG_03288","UniProtKB/TrEMBL:B6K3U7","InterPro:IPR000182","GOA:B6K3U7","InterPro:IPR016181"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"crp79","uniquename":"SJAG_03283"},{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"}],"genes_by_uniquename":{"HGNC:10540":null,"HGNC:23160":null,"HGNC:27992":null,"SJAG_03288":null,"SPAC1002.07c":null,"YEL066W":null,"YPR193C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyltransferase (GNAT) family","id":"PF00583","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":143,"start":54}],"match_end":143,"match_start":54,"name":"Acetyltransf_1"},{"dbname":"CDD","description":"NAT_SF","id":"cd04301","locations":[{"end":124,"start":61}],"match_end":124,"match_start":61,"name":"NAT_SF"},{"dbname":"PROSITE_PROFILES","description":"Gcn5-related N-acetyltransferase (GNAT) domain profile.","id":"PS51186","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":158,"start":7}],"match_end":158,"match_start":7,"name":"GNAT"},{"dbname":"FUNFAM","description":"GNAT family acetyltransferase","id":"G3DSA:3.40.630.30:FF:000064","locations":[{"end":167,"start":5}],"match_end":167,"match_start":5},{"dbname":"SUPERFAMILY","id":"SSF55729","interpro_description":"Acyl-CoA N-acyltransferase","interpro_id":"IPR016181","interpro_name":"Acyl_CoA_acyltransferase","locations":[{"end":158,"start":9}],"match_end":158,"match_start":9,"name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":168,"start":5}],"match_end":168,"match_start":5},{"dbname":"PANTHER","id":"PTHR10545","interpro_description":"Diverse Substrate Acetyltransferase","interpro_id":"IPR051016","interpro_name":"Diverse_Substrate_AcTransf","locations":[{"end":165,"start":7}],"match_end":165,"match_start":7,"name":"DIAMINE N-ACETYLTRANSFERASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":47,"start":27}],"match_end":47,"match_start":27,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":795973,"start_pos":795069,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10540","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23160","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27992","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":4932,"ortholog_uniquename":"YEL066W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03288","ortholog_taxonid":4932,"ortholog_uniquename":"YPR193C","reference_uniquename":"PMID:29761456"}],"product":"D-amino acid N-acetyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004145"]}},"subset_termids":["GO:0006520","GO:0098754","GO:0016746","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004145":null,"GO:0005634":null,"GO:0005829":null,"GO:0009447":null,"GO:0046416":null,"GO:0070458":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03288.1"],"transcripts_by_uniquename":{"SJAG_03288.1":null},"uniprot_identifier":"B6K3U7","uniquename":"SJAG_03288"}


id: SJAG_03289
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84013],"is_not":false,"summary":null,"term":"GO:0006390"},{"annotations":[84014],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[59307],"is_not":false,"summary":null,"term":"GO:0031167"},{"annotations":[84015],"is_not":false,"summary":null,"term":"GO:0006391"}],"cellular_component":[{"annotations":[84008],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[84009],"is_not":false,"summary":null,"term":"GO:0034245"},{"annotations":[84010],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[84011],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[84012],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84016],"is_not":false,"summary":null,"term":"GO:0034246"},{"annotations":[59306],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[84017],"is_not":false,"summary":null,"term":"GO:0016433"},{"annotations":[59305],"is_not":false,"summary":null,"term":"GO:0000179"}]},"dbxrefs":["InterPro:IPR029063","GOA:B6K3U8","UniProtKB/TrEMBL:B6K3U8","EnsemblGenomes-Gn:SJAG_03289","EnsemblGenomes-Tr:EEB08155","InterPro:IPR001737","InterPro:IPR023165"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl1","uniquename":"SJAG_03284"},{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"}],"genes_by_uniquename":{"HGNC:17037":null,"HGNC:18559":null,"SJAG_03289":null,"SPAC1002.08c":null,"YMR228W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal RNA adenine dimethylase","id":"PF00398","interpro_description":"Ribosomal RNA adenine methyltransferase KsgA/Erm","interpro_id":"IPR001737","interpro_name":"KsgA/Erm","locations":[{"end":348,"start":34}],"match_end":348,"match_start":34,"name":"RrnaAD"},{"dbname":"PROSITE_PROFILES","description":"rRNA adenine N(6)-methyltransferase family profile.","id":"PS51689","interpro_description":"Ribosomal RNA adenine methyltransferase KsgA/Erm","interpro_id":"IPR001737","interpro_name":"KsgA/Erm","locations":[{"end":352,"start":32}],"match_end":352,"match_start":32,"name":"SAM_RNA_A_N6_MT"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":354,"start":40}],"match_end":354,"match_start":40,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":277,"start":12}],"match_end":277,"match_start":12,"name":"Vaccinia Virus protein VP39"},{"dbname":"GENE3D","id":"G3DSA:1.10.8.100","interpro_description":"rRNA adenine dimethylase-like, C-terminal","interpro_id":"IPR023165","interpro_name":"rRNA_Ade_diMease-like_C","locations":[{"end":355,"start":281}],"match_end":355,"match_start":281},{"dbname":"PANTHER","id":"PTHR11727","interpro_description":"Ribosomal RNA adenine methyltransferase KsgA/Erm","interpro_id":"IPR001737","interpro_name":"KsgA/Erm","locations":[{"end":354,"start":17}],"match_end":354,"match_start":17,"name":"DIMETHYLADENOSINE TRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":797985,"start_pos":796885,"strand":"reverse"},"name":"mtf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18559","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":4932,"ortholog_uniquename":"YMR228W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03289","ortholog_taxonid":4932,"ortholog_uniquename":"YMR228W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial RNA polymerase specificity factor, predicted rRNA methyltransferase Mtf1","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0003723"],"NOT binding":["GO:0000179","GO:0034246","GO:0016433"]}},"subset_termids":["GO:0006351","GO:0005694","GO:0006355","GO:0005634","GO:0042254","GO:0140053","GO:0016741","GO:0140098","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000179":null,"GO:0000785":null,"GO:0003723":null,"GO:0005634":null,"GO:0005739":null,"GO:0005759":null,"GO:0006390":null,"GO:0006391":null,"GO:0016433":null,"GO:0031167":null,"GO:0034245":null,"GO:0034246":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03289.1"],"transcripts_by_uniquename":{"SJAG_03289.1":null},"uniprot_identifier":"B6K3U8","uniquename":"SJAG_03289"}


id: SJAG_03290
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84023],"is_not":false,"summary":null,"term":"GO:0006086"},{"annotations":[84024],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[84025],"is_not":false,"summary":null,"term":"GO:0019464"}],"cellular_component":[{"annotations":[84018],"is_not":false,"summary":null,"term":"GO:0005960"},{"annotations":[84019],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[84020],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[84021],"is_not":false,"summary":null,"term":"GO:0045252"},{"annotations":[84022],"is_not":false,"summary":null,"term":"GO:0045254"}],"molecular_function":[{"annotations":[84026],"is_not":false,"summary":null,"term":"GO:0004148"},{"annotations":[84027],"is_not":false,"summary":null,"term":"GO:0050660"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3U9","InterPro:IPR001100","InterPro:IPR036188","InterPro:IPR023753","InterPro:IPR004099","InterPro:IPR012999","EnsemblGenomes-Tr:EEB08156","InterPro:IPR006258","EnsemblGenomes-Gn:SJAG_03290","InterPro:IPR016156","GOA:B6K3U9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"taf11","uniquename":"SJAG_03285"},{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"}],"genes_by_uniquename":{"HGNC:2898":null,"SJAG_03290":null,"SPAC1002.09c":null,"YFL018C":null,"YPL017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pyridine nucleotide-disulphide oxidoreductase","id":"PF07992","interpro_description":"FAD/NAD(P)-binding domain","interpro_id":"IPR023753","interpro_name":"FAD/NAD-binding_dom","locations":[{"end":371,"start":46}],"match_end":371,"match_start":46,"name":"Pyr_redox_2"},{"dbname":"PFAM","description":"Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain","id":"PF02852","interpro_description":"Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain","interpro_id":"IPR004099","interpro_name":"Pyr_nucl-diS_OxRdtase_dimer","locations":[{"end":497,"start":390}],"match_end":497,"match_start":390,"name":"Pyr_redox_dim"},{"dbname":"PROSITE_PATTERNS","description":"Pyridine nucleotide-disulphide oxidoreductases class-I active site.","id":"PS00076","interpro_description":"Pyridine nucleotide-disulphide oxidoreductase, class I, active site","interpro_id":"IPR012999","interpro_name":"Pyr_OxRdtase_I_AS","locations":[{"end":91,"start":81}],"match_end":91,"match_start":81,"name":"PYRIDINE_REDOX_1"},{"dbname":"PRINTS","description":"FAD-dependent pyridine nucleotide reductase signature","id":"PR00368","locations":[{"end":67,"start":48},{"end":197,"start":179},{"end":236,"start":218},{"end":323,"start":307},{"end":358,"start":336}],"match_end":358,"match_start":48,"name":"FADPNR"},{"dbname":"PRINTS","description":"Pyridine nucleotide disulphide reductase class-I signature","id":"PR00411","locations":[{"end":69,"start":47},{"end":95,"start":80},{"end":191,"start":182},{"end":243,"start":218},{"end":322,"start":308},{"end":358,"start":351},{"end":407,"start":386},{"end":466,"start":451},{"end":493,"start":473}],"match_end":493,"match_start":47,"name":"PNDRDTASEI"},{"dbname":"FUNFAM","description":"Dihydrolipoyl dehydrogenase, mitochondrial","id":"G3DSA:3.50.50.60:FF:000001","locations":[{"end":204,"start":46}],"match_end":204,"match_start":46},{"dbname":"FUNFAM","description":"Dihydrolipoyl dehydrogenase","id":"G3DSA:3.30.390.30:FF:000001","locations":[{"end":510,"start":389}],"match_end":510,"match_start":389},{"dbname":"SUPERFAMILY","id":"SSF51905","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":413,"start":41}],"match_end":413,"match_start":41,"name":"FAD/NAD(P)-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF55424","interpro_description":"FAD/NAD-linked reductase, dimerisation domain superfamily","interpro_id":"IPR016156","interpro_name":"FAD/NAD-linked_Rdtase_dimer_sf","locations":[{"end":502,"start":386}],"match_end":502,"match_start":386,"name":"FAD/NAD-linked reductases, dimerisation (C-terminal) domain"},{"dbname":"GENE3D","id":"G3DSA:3.50.50.60","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":372,"start":47}],"match_end":372,"match_start":47},{"dbname":"GENE3D","id":"G3DSA:3.30.390.30","interpro_description":"FAD/NAD-linked reductase, dimerisation domain superfamily","interpro_id":"IPR016156","interpro_name":"FAD/NAD-linked_Rdtase_dimer_sf","locations":[{"end":502,"start":383}],"match_end":502,"match_start":383},{"dbname":"PANTHER","id":"PTHR22912","interpro_description":"Class-I pyridine nucleotide-disulfide oxidoreductase","interpro_id":"IPR050151","interpro_name":"Class-I_Pyr_Nuc-Dis_Oxidored","locations":[{"end":501,"start":43}],"match_end":501,"match_start":43,"name":"DISULFIDE OXIDOREDUCTASE"},{"dbname":"PIRSF","id":"PIRSF000350","interpro_description":"Pyridine nucleotide-disulphide oxidoreductase, class I","interpro_id":"IPR001100","interpro_name":"Pyr_nuc-diS_OxRdtase","locations":[{"end":502,"start":18}],"match_end":502,"match_start":18,"name":"Hg-II_reductase_MerA"},{"dbname":"NCBIFAM","description":"dihydrolipoyl dehydrogenase","id":"TIGR01350","interpro_description":"Dihydrolipoamide dehydrogenase","interpro_id":"IPR006258","interpro_name":"Lipoamide_DH","locations":[{"end":509,"start":46}],"match_end":509,"match_start":46,"name":"lipoamide_DH"}],"location":{"chromosome_name":"supercont5.2","end_pos":799873,"start_pos":798341,"strand":"reverse"},"name":"dld1","ortholog_annotations":[{"gene_uniquename":"SJAG_03290","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2898","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03290","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03290","ortholog_taxonid":4932,"ortholog_uniquename":"YFL018C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03290","ortholog_taxonid":4932,"ortholog_uniquename":"YPL017C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial dihydrolipoamide dehydrogenase (e3 component of oxoglutarate dehydrogenase complex) Dld1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0050660"],"NOT binding":["GO:0004148"]}},"subset_termids":["GO:0016491","GO:0005739","GO:0006790","GO:0006091","GO:0055086","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004148":null,"GO:0005739":null,"GO:0005759":null,"GO:0005960":null,"GO:0006086":null,"GO:0009060":null,"GO:0019464":null,"GO:0045252":null,"GO:0045254":null,"GO:0050660":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03290.1"],"transcripts_by_uniquename":{"SJAG_03290.1":null},"uniprot_identifier":"B6K3U9","uniquename":"SJAG_03290"}


id: SJAG_03291
data:
  {"coiled_coil_coords":[{"range":{"end":339,"start":319}},{"range":{"end":527,"start":507}}],"cv_annotations":{"biological_process":[{"annotations":[84030],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[84028],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84029],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84031],"is_not":false,"summary":null,"term":"GO:0070990"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03291","EnsemblGenomes-Tr:EEB08157","GOA:B6K3V0","InterPro:IPR010770","UniProtKB/TrEMBL:B6K3V0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":397,"start":372}},{"range":{"end":438,"start":409}},{"range":{"end":515,"start":494}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"jmj2","uniquename":"SJAG_03286"},{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"}],"genes_by_uniquename":{"HGNC:17029":null,"SJAG_03291":null,"SPAC1002.10c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SGT1 protein","id":"PF07093","interpro_description":"Ecd family","interpro_id":"IPR010770","interpro_name":"Ecd","locations":[{"end":319,"start":23}],"match_end":319,"match_start":23,"name":"SGT1"},{"dbname":"PANTHER","id":"PTHR13060","interpro_description":"Ecd family","interpro_id":"IPR010770","interpro_name":"Ecd","locations":[{"end":573,"start":339}],"match_end":573,"match_start":339,"name":"SGT1 PROTEIN  HSGT1   SUPPRESSOR OF GCR2"},{"dbname":"COILS","id":"Coil","locations":[{"end":339,"start":319},{"end":527,"start":507}],"match_end":527,"match_start":319,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":397,"start":372},{"end":438,"start":409},{"end":515,"start":494}],"match_end":515,"match_start":372,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":438,"start":410}],"match_end":438,"match_start":410,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":801892,"start_pos":800077,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":448,"start":407}},{"range":{"end":476,"start":461}}],"name":"sgt1","ortholog_annotations":[{"gene_uniquename":"SJAG_03291","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17029","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03291","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.10c","reference_uniquename":"PMID:21511999"}],"product":"snRNP binding protein Sgt1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0070990"]}},"subset_termids":["GO:0005829","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0045292":null,"GO:0070990":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03291.1"],"transcripts_by_uniquename":{"SJAG_03291.1":null},"uniprot_identifier":"B6K3V0","uniquename":"SJAG_03291"}


id: SJAG_03292
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84034],"is_not":false,"summary":null,"term":"GO:0016255"},{"annotations":[84035],"is_not":false,"summary":null,"term":"GO:0006506"}],"cellular_component":[{"annotations":[84032],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[84033],"is_not":false,"summary":null,"term":"GO:0042765"}],"molecular_function":[{"annotations":[84036],"is_not":false,"summary":null,"term":"GO:0003923"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3V1","InterPro:IPR007246","EnsemblGenomes-Tr:EEB08158","GOA:B6K3V1","EnsemblGenomes-Gn:SJAG_03292"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bqt2","uniquename":"SJAG_03287"},{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"}],"genes_by_uniquename":{"HGNC:4446":null,"SJAG_03292":null,"SPAC1002.11":null,"YLR088W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gaa1-like, GPI transamidase component","id":"PF04114","interpro_description":"GPI transamidase component Gaa1","interpro_id":"IPR007246","interpro_name":"Gaa1","locations":[{"end":535,"start":123}],"match_end":535,"match_start":123,"name":"Gaa1"},{"dbname":"PANTHER","id":"PTHR13304","interpro_description":"GPI transamidase component Gaa1","interpro_id":"IPR007246","interpro_name":"Gaa1","locations":[{"end":533,"start":8}],"match_end":533,"match_start":8,"name":"GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN"},{"dbname":"PIRSF","id":"PIRSF036762","interpro_description":"GPI transamidase component Gaa1","interpro_id":"IPR007246","interpro_name":"Gaa1","locations":[{"end":559,"start":1}],"match_end":559,"match_start":1,"name":"GAA1"}],"location":{"chromosome_name":"supercont5.2","end_pos":804032,"start_pos":802233,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":21,"start":9}},{"range":{"end":363,"start":348}}],"name":"gaa1","ortholog_annotations":[{"gene_uniquename":"SJAG_03292","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4446","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03292","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03292","ortholog_taxonid":4932,"ortholog_uniquename":"YLR088W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03292","ortholog_taxonid":4932,"ortholog_uniquename":"YLR088W","reference_uniquename":"PMID:26896847"}],"product":"GPI-anchor transamidase complex subunit Gaa1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0003923"]}},"subset_termids":["GO:0005783","GO:0005789","GO:0008233","GO:0140096","GO:0006629","GO:0016769","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003923":null,"GO:0005783":null,"GO:0006506":null,"GO:0016255":null,"GO:0042765":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":20}},{"assigned_by":"TMHMM","range":{"end":390,"start":368}},{"assigned_by":"TMHMM","range":{"end":424,"start":402}},{"assigned_by":"TMHMM","range":{"end":445,"start":428}},{"assigned_by":"TMHMM","range":{"end":488,"start":466}},{"assigned_by":"TMHMM","range":{"end":522,"start":503}},{"assigned_by":"TMHMM","range":{"end":564,"start":542}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03292.1"],"transcripts_by_uniquename":{"SJAG_03292.1":null},"uniprot_identifier":"B6K3V1","uniquename":"SJAG_03292"}


id: SJAG_03293
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84039],"is_not":false,"summary":null,"term":"GO:0009450"}],"cellular_component":[{"annotations":[84037],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84038],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[84040],"is_not":false,"summary":null,"term":"GO:0004777"},{"annotations":[84041],"is_not":false,"summary":null,"term":"GO:0036243"}]},"dbxrefs":["InterPro:IPR010102","InterPro:IPR015590","InterPro:IPR029510","EnsemblGenomes-Gn:SJAG_03293","GOA:B6K3V2","EnsemblGenomes-Tr:EEB08159","InterPro:IPR016161","InterPro:IPR016163","UniProtKB/TrEMBL:B6K3V2","InterPro:IPR016162"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03288"},{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"}],"genes_by_uniquename":{"HGNC:408":null,"SJAG_03293":null,"SPAC1002.12c":null,"YBR006W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aldehyde dehydrogenase family","id":"PF00171","interpro_description":"Aldehyde dehydrogenase domain","interpro_id":"IPR015590","interpro_name":"Aldehyde_DH_dom","locations":[{"end":570,"start":109}],"match_end":570,"match_start":109,"name":"Aldedh"},{"dbname":"CDD","description":"ALDH_F5_SSADH_GabD","id":"cd07103","locations":[{"end":572,"start":120}],"match_end":572,"match_start":120,"name":"ALDH_F5_SSADH_GabD"},{"dbname":"PROSITE_PATTERNS","description":"Aldehyde dehydrogenases glutamic acid active site.","id":"PS00687","interpro_description":"Aldehyde dehydrogenase, glutamic acid active site","interpro_id":"IPR029510","interpro_name":"Ald_DH_CS_GLU","locations":[{"end":352,"start":345}],"match_end":352,"match_start":345,"name":"ALDEHYDE_DEHYDR_GLU"},{"dbname":"FUNFAM","description":"Succinate-semialdehyde dehydrogenase I","id":"G3DSA:3.40.605.10:FF:000005","locations":[{"end":366,"start":115}],"match_end":366,"match_start":115},{"dbname":"FUNFAM","description":"Succinate-semialdehyde dehydrogenase I","id":"G3DSA:3.40.309.10:FF:000004","locations":[{"end":539,"start":349}],"match_end":539,"match_start":349},{"dbname":"SUPERFAMILY","id":"SSF53720","interpro_description":"Aldehyde/histidinol dehydrogenase","interpro_id":"IPR016161","interpro_name":"Ald_DH/histidinol_DH","locations":[{"end":573,"start":101}],"match_end":573,"match_start":101,"name":"ALDH-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.605.10","interpro_description":"Aldehyde dehydrogenase, N-terminal","interpro_id":"IPR016162","interpro_name":"Ald_DH_N","locations":[{"end":348,"start":107},{"end":569,"start":544}],"match_end":569,"match_start":107,"name":"Aldehyde Dehydrogenase; Chain A, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.40.309.10","interpro_description":"Aldehyde dehydrogenase, C-terminal","interpro_id":"IPR016163","interpro_name":"Ald_DH_C","locations":[{"end":543,"start":349}],"match_end":543,"match_start":349,"name":"Aldehyde Dehydrogenase; Chain A, domain 2"},{"dbname":"PANTHER","id":"PTHR43353","interpro_description":"Aldehyde Dehydrogenase Superfamily","interpro_id":"IPR050740","interpro_name":"Aldehyde_DH_Superfamily","locations":[{"end":572,"start":102}],"match_end":572,"match_start":102,"name":"SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL"},{"dbname":"NCBIFAM","description":"succinate-semialdehyde dehydrogenase","id":"TIGR01780","interpro_description":"Succinate semialdehyde dehydrogenase","interpro_id":"IPR010102","interpro_name":"Succ_semiAld_DH","locations":[{"end":568,"start":120}],"match_end":568,"match_start":120,"name":"SSADH"}],"location":{"chromosome_name":"supercont5.2","end_pos":805946,"start_pos":804219,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":346,"start":335}},{"range":{"end":369,"start":356}}],"name":"ssd1","ortholog_annotations":[{"gene_uniquename":"SJAG_03293","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:408","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03293","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03293","ortholog_taxonid":4932,"ortholog_uniquename":"YBR006W","reference_uniquename":"PMID:29761456"}],"product":"succinate-semialdehyde dehydrogenase [NAD(P)+] Ssd1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0036243","GO:0004777"]}},"subset_termids":["GO:0006520","GO:0005739","GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004777":null,"GO:0005739":null,"GO:0005829":null,"GO:0009450":null,"GO:0036243":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03293.1"],"transcripts_by_uniquename":{"SJAG_03293.1":null},"uniprot_identifier":"B6K3V2","uniquename":"SJAG_03293"}


id: SJAG_03295
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84044],"is_not":false,"summary":null,"term":"GO:0031505"},{"annotations":[84045],"is_not":false,"summary":null,"term":"GO:0071852"},{"annotations":[84046],"is_not":false,"summary":null,"term":"GO:0000272"},{"annotations":[84047],"is_not":false,"summary":null,"term":"GO:0000920"}],"cellular_component":[{"annotations":[84042],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[84043],"is_not":false,"summary":null,"term":"GO:0009277"}],"molecular_function":[{"annotations":[84048],"is_not":false,"summary":null,"term":"GO:0008422"}]},"dbxrefs":["GOA:B6K3V3","EnsemblGenomes-Tr:EEB08160","UniProtKB/TrEMBL:B6K3V3","EnsemblGenomes-Gn:SJAG_03295","InterPro:IPR005556"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtf1","uniquename":"SJAG_03289"},{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"}],"genes_by_uniquename":{"SJAG_03295":null,"SPAC1002.13c":null,"YIL123W":null,"YJL116C":null,"YKR042W":null,"YNL066W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Beta-glucosidase (SUN family)","id":"PF03856","interpro_description":"SUN family","interpro_id":"IPR005556","interpro_name":"SUN","locations":[{"end":410,"start":168}],"match_end":410,"match_start":168,"name":"SUN"},{"dbname":"PANTHER","id":"PTHR31316","interpro_description":"Secreted Beta-Glucosidase SUN","interpro_id":"IPR051526","interpro_name":"Beta-Glucosidase_SUN","locations":[{"end":422,"start":1}],"match_end":422,"match_start":1,"name":"BETA-GLUCOSIDASE-LIKE PROTEIN NCA3, MITOCHONDRIAL-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":808461,"start_pos":807190,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":6}},{"range":{"end":72,"start":31}},{"range":{"end":92,"start":77}},{"range":{"end":164,"start":97}},{"range":{"end":415,"start":396}}],"name":"psu1","ortholog_annotations":[{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1002.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YIL123W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YIL123W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YJL116C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YJL116C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YKR042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YKR042W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YNL066W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03295","ortholog_taxonid":4932,"ortholog_uniquename":"YNL066W","reference_uniquename":"PMID:26896847"}],"product":"cell wall beta-glucosidase Psu1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0008422"]}},"subset_termids":["GO:0005975","GO:0009986","GO:0005618","GO:0071554","GO:0016798"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000272":null,"GO:0000920":null,"GO:0008422":null,"GO:0009277":null,"GO:0009986":null,"GO:0031505":null,"GO:0071852":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03295.1"],"transcripts_by_uniquename":{"SJAG_03295.1":null},"uniprot_identifier":"B6K3V3","uniquename":"SJAG_03295"}


id: SJAG_03296
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85615],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[85613],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[85614],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[85616],"is_not":false,"summary":null,"term":"GO:0016531"}]},"dbxrefs":["GOA:B6K3V4","InterPro:IPR020164","EnsemblGenomes-Tr:EEB08161","UniProtKB/TrEMBL:B6K3V4","EnsemblGenomes-Gn:SJAG_03296"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dld1","uniquename":"SJAG_03290"},{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"}],"genes_by_uniquename":{"HGNC:20213":null,"SJAG_03296":null,"SPAC1486.08":null,"YJL003W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome c oxidase assembly protein COX16","id":"PF14138","interpro_description":"Cytochrome c oxidase assembly protein COX16","interpro_id":"IPR020164","interpro_name":"Cyt_c_Oxase_assmbl_COX16","locations":[{"end":93,"start":17}],"match_end":93,"match_start":17,"name":"COX16"},{"dbname":"PANTHER","id":"PTHR17130","locations":[{"end":96,"start":7}],"match_end":96,"match_start":7,"name":"MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25"}],"location":{"chromosome_name":"supercont5.2","end_pos":810076,"start_pos":809678,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":57,"start":48}}],"name":"cox16","ortholog_annotations":[{"gene_uniquename":"SJAG_03296","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20213","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03296","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03296","ortholog_taxonid":4932,"ortholog_uniquename":"YJL003W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03296","ortholog_taxonid":4932,"ortholog_uniquename":"YJL003W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial copper chaperone for cytochrome c oxidase Cox16","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0016531"]}},"subset_termids":["GO:0065003","GO:0140104","GO:0007005","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0016531":null,"GO:0033617":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":15}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03296.1"],"transcripts_by_uniquename":{"SJAG_03296.1":null},"uniprot_identifier":"B6K3V4","uniquename":"SJAG_03296"}


id: SJAG_03297
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85610],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[85608],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85609],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[85611],"is_not":false,"summary":null,"term":"GO:0070180"},{"annotations":[85612],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03297","EnsemblGenomes-Tr:EEB08162","InterPro:IPR006519","InterPro:IPR020784","UniProtKB/TrEMBL:B6K3V5","InterPro:IPR020783","InterPro:IPR036796","InterPro:IPR000911","GOA:B6K3V5","InterPro:IPR036769"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sgt1","uniquename":"SJAG_03291"},{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"}],"genes_by_uniquename":{"HGNC:14042":null,"SJAG_03297":null,"SPAC1486.07c":null,"YNL185C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L11, N-terminal domain","id":"PF03946","interpro_description":"Large ribosomal subunit protein uL11, N-terminal","interpro_id":"IPR020784","interpro_name":"Ribosomal_uL11_N","locations":[{"end":69,"start":11}],"match_end":69,"match_start":11,"name":"Ribosomal_L11_N"},{"dbname":"PFAM","description":"Ribosomal protein L11, RNA binding domain","id":"PF00298","interpro_description":"Large ribosomal subunit protein uL11, C-terminal","interpro_id":"IPR020783","interpro_name":"Ribosomal_uL11_C","locations":[{"end":144,"start":75}],"match_end":144,"match_start":75,"name":"Ribosomal_L11"},{"dbname":"CDD","description":"Ribosomal_L11","id":"cd00349","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":144,"start":11}],"match_end":144,"match_start":11,"name":"Ribosomal_L11"},{"dbname":"SMART","id":"SM00649","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":145,"start":11}],"match_end":145,"match_start":11,"name":"rl11c"},{"dbname":"FUNFAM","description":"Mitochondrial ribosomal protein L11","id":"G3DSA:1.10.10.250:FF:000003","locations":[{"end":145,"start":72}],"match_end":145,"match_start":72},{"dbname":"FUNFAM","description":"50S ribosomal protein L11","id":"G3DSA:3.30.1550.10:FF:000005","locations":[{"end":72,"start":6}],"match_end":72,"match_start":6},{"dbname":"SUPERFAMILY","id":"SSF54747","interpro_description":"Large ribosomal subunit protein uL11, N-terminal domain superfamily","interpro_id":"IPR036796","interpro_name":"Ribosomal_uL11_N_sf","locations":[{"end":74,"start":9}],"match_end":74,"match_start":9,"name":"Ribosomal L11/L12e N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF46906","interpro_description":"Large ribosomal subunit protein uL11, C-terminal domain superfamily","interpro_id":"IPR036769","interpro_name":"Ribosomal_uL11_C_sf","locations":[{"end":144,"start":70}],"match_end":144,"match_start":70,"name":"Ribosomal protein L11, C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.250","interpro_description":"Large ribosomal subunit protein uL11, C-terminal domain superfamily","interpro_id":"IPR036769","interpro_name":"Ribosomal_uL11_C_sf","locations":[{"end":145,"start":72}],"match_end":145,"match_start":72},{"dbname":"GENE3D","id":"G3DSA:3.30.1550.10","interpro_description":"Large ribosomal subunit protein uL11, N-terminal domain superfamily","interpro_id":"IPR036796","interpro_name":"Ribosomal_uL11_N_sf","locations":[{"end":71,"start":8}],"match_end":71,"match_start":8},{"dbname":"PANTHER","id":"PTHR11661","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":145,"start":9}],"match_end":145,"match_start":9,"name":"60S RIBOSOMAL PROTEIN L12"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL11 [rplK].","id":"MF_00736","interpro_description":"Ribosomal protein uL11","interpro_id":"IPR000911","interpro_name":"Ribosomal_uL11","locations":[{"end":146,"start":7}],"match_end":146,"match_start":7,"name":"Ribosomal_L11"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L11","id":"TIGR01632","interpro_description":"Large ribosomal subunit protein uL11, bacterial-type","interpro_id":"IPR006519","interpro_name":"Ribosomal_uL11_bac-typ","locations":[{"end":145,"start":8}],"match_end":145,"match_start":8,"name":"L11_bact"}],"location":{"chromosome_name":"supercont5.2","end_pos":810853,"start_pos":810413,"strand":"forward"},"name":"mrpl19","ortholog_annotations":[{"gene_uniquename":"SJAG_03297","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14042","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03297","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03297","ortholog_taxonid":4932,"ortholog_uniquename":"YNL185C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03297","ortholog_taxonid":4932,"ortholog_uniquename":"YNL185C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0070180"],"NOT binding":["GO:0003735"]}},"subset_termids":["GO:0140053","GO:0005198","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005737":null,"GO:0005762":null,"GO:0032543":null,"GO:0070180":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03297.1"],"transcripts_by_uniquename":{"SJAG_03297.1":null},"uniprot_identifier":"B6K3V5","uniquename":"SJAG_03297"}


id: SJAG_03298
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85605],"is_not":false,"summary":null,"term":"GO:0034355"},{"annotations":[85606],"is_not":false,"summary":null,"term":"GO:0019358"}],"cellular_component":[{"annotations":[68795],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[85602],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85603],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[85604],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85607],"is_not":false,"summary":null,"term":"GO:0004516"}]},"dbxrefs":["InterPro:IPR006406","InterPro:IPR040727","EnsemblGenomes-Gn:SJAG_03298","InterPro:IPR036068","EnsemblGenomes-Tr:EEB08163","InterPro:IPR007229","GOA:B6K3V6","InterPro:IPR041525","UniProtKB/TrEMBL:B6K3V6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gaa1","uniquename":"SJAG_03292"},{"name":"ssd1","uniquename":"SJAG_03293"},{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"}],"genes_by_uniquename":{"HGNC:30450":null,"SJAG_03298":null,"SPAC1486.06":null,"YOR209C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain","id":"PF17767","interpro_description":"Nicotinate phosphoribosyltransferase, N-terminal domain","interpro_id":"IPR040727","interpro_name":"NAPRTase_N","locations":[{"end":131,"start":8}],"match_end":131,"match_start":8,"name":"NAPRTase_N"},{"dbname":"PFAM","description":"Nicotinate phosphoribosyltransferase (NAPRTase) family","id":"PF04095","interpro_description":"Nicotinate/nicotinamide phosphoribosyltransferase","interpro_id":"IPR041525","interpro_name":"N/Namide_PRibTrfase","locations":[{"end":406,"start":165}],"match_end":406,"match_start":165,"name":"NAPRTase"},{"dbname":"CDD","description":"PncB_like","id":"cd01401","interpro_description":"Nicotinate phosphoribosyltransferase","interpro_id":"IPR006406","interpro_name":"Nic_PRibTrfase","locations":[{"end":390,"start":5}],"match_end":390,"match_start":5,"name":"PncB_like"},{"dbname":"SUPERFAMILY","id":"SSF54675","locations":[{"end":139,"start":4}],"match_end":139,"match_start":4,"name":"Nicotinate/Quinolinate PRTase N-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF51690","interpro_description":"Nicotinate phosphoribosyltransferase-like, C-terminal","interpro_id":"IPR036068","interpro_name":"Nicotinate_pribotase-like_C","locations":[{"end":402,"start":121}],"match_end":402,"match_start":121,"name":"Nicotinate/Quinolinate PRTase C-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.20.140.10","locations":[{"end":408,"start":1}],"match_end":408,"match_start":1,"name":"nicotinate phosphoribosyltransferase"},{"dbname":"PANTHER","id":"PTHR11098","interpro_description":"Nicotinate phosphoribosyltransferase family","interpro_id":"IPR007229","interpro_name":"Nic_PRibTrfase-Fam","locations":[{"end":400,"start":4}],"match_end":400,"match_start":4,"name":"NICOTINATE PHOSPHORIBOSYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF000484","interpro_description":"Nicotinate phosphoribosyltransferase family","interpro_id":"IPR007229","interpro_name":"Nic_PRibTrfase-Fam","locations":[{"end":397,"start":1}],"match_end":397,"match_start":1,"name":"NAPRT"},{"dbname":"HAMAP","description":"Nicotinate phosphoribosyltransferase [pncB].","id":"MF_00570","interpro_description":"Nicotinate phosphoribosyltransferase","interpro_id":"IPR006406","interpro_name":"Nic_PRibTrfase","locations":[{"end":408,"start":1}],"match_end":408,"match_start":1,"name":"NAPRTase"},{"dbname":"NCBIFAM","description":"nicotinate phosphoribosyltransferase","id":"TIGR01514","interpro_description":"Nicotinate phosphoribosyltransferase","interpro_id":"IPR006406","interpro_name":"Nic_PRibTrfase","locations":[{"end":403,"start":3}],"match_end":403,"match_start":3,"name":"NAPRTase"}],"location":{"chromosome_name":"supercont5.2","end_pos":812530,"start_pos":811298,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":240,"start":226}}],"name":"npt1","ortholog_annotations":[{"gene_uniquename":"SJAG_03298","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30450","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03298","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03298","ortholog_taxonid":4932,"ortholog_uniquename":"YOR209C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03298","ortholog_taxonid":4932,"ortholog_uniquename":"YOR209C","reference_uniquename":"PMID:26896847"}],"product":"nicotinate phosphoribosyltransferase Npt1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004516"]}},"subset_termids":["GO:0005634","GO:0016874","GO:0005694","GO:0055086","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004516":null,"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0019358":null,"GO:0034355":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03298.1"],"transcripts_by_uniquename":{"SJAG_03298.1":null},"uniprot_identifier":"B6K3V6","uniquename":"SJAG_03298"}


id: SJAG_03299
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85593],"is_not":false,"summary":null,"term":"GO:0000973"},{"annotations":[85594],"is_not":false,"summary":null,"term":"GO:0006606"},{"annotations":[85595],"is_not":false,"summary":null,"term":"GO:0000054"},{"annotations":[85596],"is_not":false,"summary":null,"term":"GO:0006405"},{"annotations":[85597],"is_not":false,"summary":null,"term":"GO:0034398"}],"cellular_component":[{"annotations":[85588],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[85589],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[85590,115732,116059],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[85591],"is_not":false,"summary":null,"term":"GO:0044614"},{"annotations":[85592],"is_not":false,"summary":null,"term":"GO:0031080"}],"molecular_function":[{"annotations":[85598],"is_not":false,"summary":null,"term":"GO:0008139"},{"annotations":[85599],"is_not":false,"summary":null,"term":"GO:0008233"},{"annotations":[85600],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[85601],"is_not":false,"summary":null,"term":"GO:0017056"}]},"dbxrefs":["InterPro:IPR025574","EnsemblGenomes-Tr:EEB08164","InterPro:IPR037637","InterPro:IPR037665","InterPro:IPR036903","InterPro:IPR007230","UniProtKB/TrEMBL:B6K3V7","EnsemblGenomes-Gn:SJAG_03299","GOA:B6K3V7","InterPro:IPR021967"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":103,"start":1}},{"range":{"end":158,"start":127}},{"range":{"end":293,"start":237}},{"range":{"end":344,"start":306}},{"range":{"end":657,"start":634}},{"range":{"end":785,"start":753}},{"range":{"end":962,"start":937}},{"range":{"end":1083,"start":1047}}],"feature_publications":[{"reference_uniquename":"PMID:32109380","source":"canto"},{"reference_uniquename":"PMID:21802294","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"psu1","uniquename":"SJAG_03295"},{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"}],"genes_by_uniquename":{"HGNC:8068":null,"SJAG_03299":null,"SPAC1486.05":null,"YGL092W":null,"YKL068W":null,"YMR047C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleoporin FG repeat region","id":"PF13634","interpro_description":"Nucleoporin FG repeat","interpro_id":"IPR025574","interpro_name":"Nucleoporin_FG_rpt","locations":[{"end":114,"start":37},{"end":328,"start":241},{"end":567,"start":499}],"match_end":567,"match_start":37,"name":"Nucleoporin_FG"},{"dbname":"PFAM","description":"Nucleoporin autopeptidase","id":"PF04096","locations":[{"end":935,"start":791}],"match_end":935,"match_start":791,"name":"Nucleoporin2"},{"dbname":"PFAM","description":"Nuclear protein 96","id":"PF12110","interpro_description":"Nuclear pore complex protein NUP96, C-terminal domain","interpro_id":"IPR021967","interpro_name":"Nup98_C","locations":[{"end":1636,"start":1337}],"match_end":1636,"match_start":1337,"name":"Nup96"},{"dbname":"PFAM","description":"Nup98, Gle2-binding sequence","id":"PF21240","locations":[{"end":234,"start":211}],"match_end":234,"match_start":211,"name":"Nup98_GLEBS"},{"dbname":"PROSITE_PROFILES","description":"NUP C-terminal domain profile.","id":"PS51434","interpro_description":"Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain","interpro_id":"IPR007230","interpro_name":"Nup98_auto-Pept-S59_dom","locations":[{"end":930,"start":790}],"match_end":930,"match_start":790,"name":"NUP_C"},{"dbname":"FUNFAM","description":"Nuclear pore complex protein Nup98-Nup96","id":"G3DSA:1.10.10.2360:FF:000001","locations":[{"end":239,"start":189}],"match_end":239,"match_start":189},{"dbname":"FUNFAM","description":"Nucleoporin SONB, putative","id":"G3DSA:3.30.1610.10:FF:000003","locations":[{"end":937,"start":780}],"match_end":937,"match_start":780},{"dbname":"SUPERFAMILY","id":"SSF82215","interpro_description":"Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily","interpro_id":"IPR036903","interpro_name":"Nup98_auto-Pept-S59_dom_sf","locations":[{"end":937,"start":788}],"match_end":937,"match_start":788,"name":"C-terminal autoproteolytic domain of nucleoporin nup98"},{"dbname":"GENE3D","id":"G3DSA:3.30.1610.10","interpro_description":"Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily","interpro_id":"IPR036903","interpro_name":"Nup98_auto-Pept-S59_dom_sf","locations":[{"end":937,"start":779}],"match_end":937,"match_start":779,"name":"Peptidase S59, nucleoporin"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.690","locations":[{"end":1411,"start":1320}],"match_end":1411,"match_start":1320},{"dbname":"GENE3D","id":"G3DSA:1.10.10.2360","locations":[{"end":239,"start":187}],"match_end":239,"match_start":187},{"dbname":"PANTHER","id":"PTHR23198","interpro_description":"Nucleoporin peptidase S59-like","interpro_id":"IPR037665","interpro_name":"Nucleoporin_S59-like","locations":[{"end":976,"start":449}],"match_end":976,"match_start":449,"name":"NUCLEOPORIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":103,"start":1},{"end":158,"start":127},{"end":293,"start":237},{"end":344,"start":306},{"end":657,"start":634},{"end":785,"start":753},{"end":962,"start":937},{"end":1083,"start":1047}],"match_end":1083,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Glycine-rich","description":"consensus disorder prediction","id":"mobidb-lite-Glycine-rich","locations":[{"end":39,"start":26}],"match_end":39,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":71,"start":40},{"end":154,"start":136},{"end":260,"start":247},{"end":292,"start":267},{"end":1076,"start":1065}],"match_end":1076,"match_start":40,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":948,"start":937}],"match_end":948,"match_start":937,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":83,"start":72},{"end":103,"start":90},{"end":246,"start":237},{"end":651,"start":635}],"match_end":651,"match_start":72,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":959,"start":949}],"match_end":959,"match_start":949,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":818875,"start_pos":813506,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":70,"start":23}},{"range":{"end":146,"start":135}},{"range":{"end":165,"start":149}},{"range":{"end":303,"start":246}},{"range":{"end":346,"start":311}},{"range":{"end":437,"start":350}},{"range":{"end":453,"start":440}},{"range":{"end":480,"start":470}},{"range":{"end":552,"start":507}},{"range":{"end":569,"start":557}},{"range":{"end":593,"start":584}},{"range":{"end":629,"start":619}},{"range":{"end":780,"start":773}},{"range":{"end":945,"start":936}},{"range":{"end":1097,"start":1060}}],"name":"nup189","ortholog_annotations":[{"gene_uniquename":"SJAG_03299","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8068","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4932,"ortholog_uniquename":"YGL092W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4932,"ortholog_uniquename":"YKL068W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03299","ortholog_taxonid":4932,"ortholog_uniquename":"YMR047C","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin Nup98 and Nup96","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:32109380":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0003723","GO:0008139"],"NOT binding":["GO:0017056","GO:0008233"]}},"subset_termids":["GO:0005634","GO:0005198","GO:0005643","GO:0006913","GO:0140096","GO:0008233","GO:0042254","GO:0005048","GO:0034399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000054":null,"GO:0000973":null,"GO:0003723":null,"GO:0005643":null,"GO:0006405":null,"GO:0006606":null,"GO:0008139":null,"GO:0008233":null,"GO:0017056":null,"GO:0031080":null,"GO:0031965":null,"GO:0034398":null,"GO:0034399":null,"GO:0044614":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03299.1"],"transcripts_by_uniquename":{"SJAG_03299.1":null},"uniprot_identifier":"B6K3V7","uniquename":"SJAG_03299"}


id: SJAG_03300
data:
  {"coiled_coil_coords":[{"range":{"end":113,"start":65}},{"range":{"end":179,"start":135}},{"range":{"end":243,"start":191}},{"range":{"end":328,"start":284}},{"range":{"end":350,"start":330}},{"range":{"end":413,"start":379}},{"range":{"end":476,"start":435}},{"range":{"end":555,"start":535}},{"range":{"end":674,"start":629}},{"range":{"end":751,"start":731}},{"range":{"end":803,"start":773}},{"range":{"end":871,"start":830}},{"range":{"end":932,"start":898}},{"range":{"end":985,"start":940}},{"range":{"end":1056,"start":1018}},{"range":{"end":1101,"start":1067}},{"range":{"end":1179,"start":1138}},{"range":{"end":1244,"start":1224}},{"range":{"end":1279,"start":1252}},{"range":{"end":1350,"start":1288}},{"range":{"end":1397,"start":1370}},{"range":{"end":1458,"start":1410}},{"range":{"end":1519,"start":1464}},{"range":{"end":1629,"start":1609}}],"cv_annotations":{"biological_process":[{"annotations":[85585],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[85586],"is_not":false,"summary":null,"term":"GO:0120292"},{"annotations":[65948],"is_not":false,"summary":null,"term":"GO:0006606"}],"cellular_component":[{"annotations":[85580],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[85581],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[85582],"is_not":false,"summary":null,"term":"GO:0044615"},{"annotations":[85583],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[85584],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85587],"is_not":false,"summary":null,"term":"GO:0017056"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03300","InterPro:IPR012929","GOA:B6K3V8","EnsemblGenomes-Tr:EEB08165","UniProtKB/TrEMBL:B6K3V8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1120,"start":1096}},{"range":{"end":1680,"start":1621}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox16","uniquename":"SJAG_03296"},{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"}],"genes_by_uniquename":{"SJAG_03300":null,"SPAC1486.04c":null,"YIL149C":null,"YKR095W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TPR/MLP1/MLP2-like protein","id":"PF07926","interpro_description":"Nucleoprotein TPR/MLP1","interpro_id":"IPR012929","interpro_name":"TPR/MLP1","locations":[{"end":1106,"start":1010}],"match_end":1106,"match_start":1010,"name":"TPR_MLP1_2"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.1490","locations":[{"end":998,"start":829}],"match_end":998,"match_start":829},{"dbname":"PANTHER","id":"PTHR18898","locations":[{"end":1668,"start":20}],"match_end":1668,"match_start":20,"name":"NUCLEOPROTEIN TPR-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":113,"start":65},{"end":179,"start":135},{"end":243,"start":191},{"end":328,"start":284},{"end":350,"start":330},{"end":413,"start":379},{"end":476,"start":435},{"end":555,"start":535},{"end":674,"start":629},{"end":751,"start":731},{"end":803,"start":773},{"end":871,"start":830},{"end":932,"start":898},{"end":985,"start":940},{"end":1056,"start":1018},{"end":1101,"start":1067},{"end":1179,"start":1138},{"end":1244,"start":1224},{"end":1279,"start":1252},{"end":1350,"start":1288},{"end":1397,"start":1370},{"end":1458,"start":1410},{"end":1519,"start":1464},{"end":1629,"start":1609}],"match_end":1629,"match_start":65,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1120,"start":1096},{"end":1680,"start":1621}],"match_end":1680,"match_start":1096,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":1650,"start":1638}],"match_end":1650,"match_start":1638,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1120,"start":1099},{"end":1637,"start":1621}],"match_end":1637,"match_start":1099,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":1680,"start":1664}],"match_end":1680,"match_start":1664,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":824233,"start_pos":819191,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":47}},{"range":{"end":171,"start":159}},{"range":{"end":227,"start":216}},{"range":{"end":795,"start":780}},{"range":{"end":1091,"start":1074}},{"range":{"end":1172,"start":1154}},{"range":{"end":1195,"start":1183}},{"range":{"end":1293,"start":1281}},{"range":{"end":1448,"start":1431}},{"range":{"end":1469,"start":1459}},{"range":{"end":1654,"start":1637}}],"name":"alm1","ortholog_annotations":[{"gene_uniquename":"SJAG_03300","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03300","ortholog_taxonid":4932,"ortholog_uniquename":"YIL149C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03300","ortholog_taxonid":4932,"ortholog_uniquename":"YKR095W","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin Alm1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0017056"]}},"subset_termids":["GO:0005634","GO:0005643","GO:0005198","GO:0006913"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005635":null,"GO:0005643":null,"GO:0006406":null,"GO:0006606":null,"GO:0017056":null,"GO:0044615":null,"GO:0120292":null,"GO:0140602":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03300.1"],"transcripts_by_uniquename":{"SJAG_03300.1":null},"uniprot_identifier":"B6K3V8","uniquename":"SJAG_03300"}


id: SJAG_03301
data:
  {"coiled_coil_coords":[{"range":{"end":281,"start":261}},{"range":{"end":670,"start":650}}],"cv_annotations":{"biological_process":[{"annotations":[85577],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[85578],"is_not":false,"summary":null,"term":"GO:0000390"}],"cellular_component":[{"annotations":[85574],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[85575],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[85576],"is_not":false,"summary":null,"term":"GO:0071008"}],"molecular_function":[{"annotations":[85579],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR000467","EnsemblGenomes-Gn:SJAG_03301","EnsemblGenomes-Tr:EEB08166","UniProtKB/TrEMBL:B6K3V9","InterPro:IPR022783","GOA:B6K3V9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}},{"range":{"end":169,"start":139}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl19","uniquename":"SJAG_03297"},{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"}],"genes_by_uniquename":{"HGNC:17165":null,"SJAG_03301":null,"SPAC1486.03c":null,"YLR424W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GC-rich sequence DNA-binding factor-like protein","id":"PF07842","interpro_description":"GCF, C-terminal","interpro_id":"IPR022783","interpro_name":"GCFC_dom","locations":[{"end":591,"start":302}],"match_end":591,"match_start":302,"name":"GCFC"},{"dbname":"PFAM","description":"G-patch domain","id":"PF01585","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":130,"start":87}],"match_end":130,"match_start":87,"name":"G-patch"},{"dbname":"PROSITE_PROFILES","description":"G-patch domain profile.","id":"PS50174","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":133,"start":87}],"match_end":133,"match_start":87,"name":"G_PATCH"},{"dbname":"SMART","id":"SM00443","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":131,"start":85}],"match_end":131,"match_start":85,"name":"G-patch_5"},{"dbname":"PANTHER","id":"PTHR23329","interpro_description":"TFP11/STIP/Ntr1","interpro_id":"IPR045211","interpro_name":"TFP11/STIP/Ntr1","locations":[{"end":756,"start":16}],"match_end":756,"match_start":16,"name":"TUFTELIN-INTERACTING PROTEIN 11-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":281,"start":261},{"end":670,"start":650}],"match_end":670,"match_start":261,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1},{"end":169,"start":139}],"match_end":169,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":826890,"start_pos":824500,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":16,"start":6}},{"range":{"end":64,"start":50}},{"range":{"end":171,"start":154}},{"range":{"end":673,"start":658}}],"name":"ntr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03301","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17165","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03301","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03301","ortholog_taxonid":4932,"ortholog_uniquename":"YLR424W","reference_uniquename":"PMID:29761456"}],"product":"RNA-binding splicing factor Ntr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0003723"]}},"subset_termids":["GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000390":null,"GO:0003723":null,"GO:0005634":null,"GO:0045292":null,"GO:0071008":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03301.1"],"transcripts_by_uniquename":{"SJAG_03301.1":null},"uniprot_identifier":"B6K3V9","uniquename":"SJAG_03301"}


id: SJAG_03302
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85573],"is_not":false,"summary":null,"term":"GO:0032933"}],"cellular_component":[{"annotations":[85571],"is_not":false,"summary":null,"term":"GO:0044695"},{"annotations":[85572],"is_not":false,"summary":null,"term":"GO:0000139"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03302","GOA:B6K3W0","UniProtKB/TrEMBL:B6K3W0","EnsemblGenomes-Tr:EEB08167"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":257,"start":225}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"npt1","uniquename":"SJAG_03298"},{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"}],"genes_by_uniquename":{"HGNC:20486":null,"SJAG_03302":null,"SPAC1486.02c":null,"YOL073C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF144091","interpro_description":"Rhomboid-like superfamily","interpro_id":"IPR035952","interpro_name":"Rhomboid-like_sf","locations":[{"end":184,"start":10}],"match_end":184,"match_start":10,"name":"Rhomboid-like"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":257,"start":225}],"match_end":257,"match_start":225,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":828228,"start_pos":827296,"strand":"forward"},"name":"dsc2","ortholog_annotations":[{"gene_uniquename":"SJAG_03302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20486","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03302","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03302","ortholog_taxonid":4932,"ortholog_uniquename":"YOL073C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03302","ortholog_taxonid":4932,"ortholog_uniquename":"YOL073C","reference_uniquename":"PMID:26896847"}],"product":"Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0023052","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0032933":null,"GO:0044695":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":15}},{"assigned_by":"TMHMM","range":{"end":113,"start":91}},{"assigned_by":"TMHMM","range":{"end":150,"start":128}},{"assigned_by":"TMHMM","range":{"end":185,"start":163}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03302.1"],"transcripts_by_uniquename":{"SJAG_03302.1":null},"uniprot_identifier":"B6K3W0","uniquename":"SJAG_03302"}


id: SJAG_03303
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85568],"is_not":false,"summary":null,"term":"GO:0019430"}],"cellular_component":[{"annotations":[85566],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[85567],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[85569],"is_not":false,"summary":null,"term":"GO:0030145"},{"annotations":[85570],"is_not":false,"summary":null,"term":"GO:0004784"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08168","InterPro:IPR019833","InterPro:IPR001189","UniProtKB/TrEMBL:B6K3W1","EnsemblGenomes-Gn:SJAG_03303","InterPro:IPR019832","GOA:B6K3W1","InterPro:IPR019831","InterPro:IPR036314","InterPro:IPR036324"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fmc1","uniquename":"SJAG_06135"},{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"}],"genes_by_uniquename":{"HGNC:11180":null,"SJAG_03303":null,"SPAC1486.01":null,"YHR008C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Iron/manganese superoxide dismutases, C-terminal domain","id":"PF02777","interpro_description":"Manganese/iron superoxide dismutase, C-terminal","interpro_id":"IPR019832","interpro_name":"Mn/Fe_SOD_C","locations":[{"end":214,"start":117}],"match_end":214,"match_start":117,"name":"Sod_Fe_C"},{"dbname":"PFAM","description":"Iron/manganese superoxide dismutases, alpha-hairpin domain","id":"PF00081","interpro_description":"Manganese/iron superoxide dismutase, N-terminal","interpro_id":"IPR019831","interpro_name":"Mn/Fe_SOD_N","locations":[{"end":104,"start":27}],"match_end":104,"match_start":27,"name":"Sod_Fe_N"},{"dbname":"PROSITE_PATTERNS","description":"Manganese and iron superoxide dismutases signature.","id":"PS00088","interpro_description":"Manganese/iron superoxide dismutase, binding site","interpro_id":"IPR019833","interpro_name":"Mn/Fe_SOD_BS","locations":[{"end":188,"start":181}],"match_end":188,"match_start":181,"name":"SOD_MN"},{"dbname":"PRINTS","description":"Manganese superoxide dismutase signature","id":"PR01703","interpro_description":"Manganese/iron superoxide dismutase","interpro_id":"IPR001189","interpro_name":"Mn/Fe_SOD","locations":[{"end":40,"start":29},{"end":63,"start":50},{"end":100,"start":87},{"end":152,"start":144},{"end":191,"start":179}],"match_end":191,"match_start":29,"name":"MNSODISMTASE"},{"dbname":"FUNFAM","description":"Superoxide dismutase [Fe]","id":"G3DSA:3.55.40.20:FF:000004","locations":[{"end":217,"start":106}],"match_end":217,"match_start":106},{"dbname":"FUNFAM","description":"Superoxide dismutase","id":"G3DSA:1.10.287.990:FF:000001","locations":[{"end":104,"start":43}],"match_end":104,"match_start":43},{"dbname":"SUPERFAMILY","id":"SSF46609","interpro_description":"Manganese/iron superoxide dismutase, N-terminal domain superfamily","interpro_id":"IPR036324","interpro_name":"Mn/Fe_SOD_N_sf","locations":[{"end":105,"start":20}],"match_end":105,"match_start":20,"name":"Fe,Mn superoxide dismutase (SOD), N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF54719","interpro_description":"Manganese/iron superoxide dismutase, C-terminal domain superfamily","interpro_id":"IPR036314","interpro_name":"SOD_C_sf","locations":[{"end":216,"start":110}],"match_end":216,"match_start":110,"name":"Fe,Mn superoxide dismutase (SOD), C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.55.40.20","interpro_description":"Manganese/iron superoxide dismutase, C-terminal domain superfamily","interpro_id":"IPR036314","interpro_name":"SOD_C_sf","locations":[{"end":217,"start":105}],"match_end":217,"match_start":105},{"dbname":"GENE3D","id":"G3DSA:1.10.287.990","interpro_description":"Manganese/iron superoxide dismutase, N-terminal domain superfamily","interpro_id":"IPR036324","interpro_name":"Mn/Fe_SOD_N_sf","locations":[{"end":104,"start":43}],"match_end":104,"match_start":43,"name":"Fe,Mn superoxide dismutase (SOD) domain"},{"dbname":"PANTHER","id":"PTHR11404","interpro_description":"Iron/Manganese Superoxide Dismutase","interpro_id":"IPR050265","interpro_name":"Fe/Mn_Superoxide_Dismutase","locations":[{"end":216,"start":16}],"match_end":216,"match_start":16,"name":"SUPEROXIDE DISMUTASE 2"},{"dbname":"PIRSF","id":"PIRSF000349","interpro_description":"Manganese/iron superoxide dismutase","interpro_id":"IPR001189","interpro_name":"Mn/Fe_SOD","locations":[{"end":217,"start":3}],"match_end":217,"match_start":3,"name":"MnSOD_FeSOD"}],"location":{"chromosome_name":"supercont5.2","end_pos":829356,"start_pos":828608,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":50,"start":41}}],"name":"sod2","ortholog_annotations":[{"gene_uniquename":"SJAG_03303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11180","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03303","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1486.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03303","ortholog_taxonid":4932,"ortholog_uniquename":"YHR008C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03303","ortholog_taxonid":4932,"ortholog_uniquename":"YHR008C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial superoxide dismutase Sod2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0030145"],"NOT binding":["GO:0004784"]}},"subset_termids":["GO:0005739","GO:0098754","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004784":null,"GO:0005739":null,"GO:0005759":null,"GO:0019430":null,"GO:0030145":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03303.1"],"transcripts_by_uniquename":{"SJAG_03303.1":null},"uniprot_identifier":"B6K3W1","uniquename":"SJAG_03303"}


id: SJAG_03304
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB08169","UniProtKB/TrEMBL:B6K3W2","EnsemblGenomes-Gn:SJAG_03304"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":58,"start":19}},{"range":{"end":129,"start":89}},{"range":{"end":246,"start":201}},{"range":{"end":324,"start":303}},{"range":{"end":448,"start":420}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup189","uniquename":"SJAG_03299"},{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"}],"genes_by_uniquename":{"SJAG_03304":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":58,"start":19},{"end":129,"start":89},{"end":246,"start":201},{"end":324,"start":303},{"end":448,"start":420}],"match_end":448,"match_start":19,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":103,"start":89}],"match_end":103,"match_start":89,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":58,"start":49},{"end":113,"start":104},{"end":241,"start":212}],"match_end":241,"match_start":49,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":832248,"start_pos":830902,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":102,"start":83}},{"range":{"end":324,"start":313}}],"product":"conserved fungal family","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03304.1"],"transcripts_by_uniquename":{"SJAG_03304.1":null},"uniprot_identifier":"B6K3W2","uniquename":"SJAG_03304"}


id: SJAG_03305
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69323],"is_not":false,"summary":null,"term":"GO:0008654"}],"molecular_function":[{"annotations":[69324],"is_not":false,"summary":null,"term":"GO:0004366"},{"annotations":[69322],"is_not":false,"summary":null,"term":"GO:0016287"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08170","InterPro:IPR002123","UniProtKB/TrEMBL:B6K3W3","EnsemblGenomes-Gn:SJAG_03305","GOA:B6K3W3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":703,"start":629}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alm1","uniquename":"SJAG_03300"},{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"}],"genes_by_uniquename":{"SJAG_03305":null,"YBL011W":null,"YKR067W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acyltransferase","id":"PF01553","interpro_description":"Phospholipid/glycerol acyltransferase","interpro_id":"IPR002123","interpro_name":"Plipid/glycerol_acylTrfase","locations":[{"end":112,"start":33},{"end":255,"start":184}],"match_end":255,"match_start":33,"name":"Acyltransferase"},{"dbname":"CDD","description":"LPLAT_AAK14816-like","id":"cd07992","locations":[{"end":297,"start":20}],"match_end":297,"match_start":20,"name":"LPLAT_AAK14816-like"},{"dbname":"SMART","id":"SM00563","interpro_description":"Phospholipid/glycerol acyltransferase","interpro_id":"IPR002123","interpro_name":"Plipid/glycerol_acylTrfase","locations":[{"end":258,"start":48}],"match_end":258,"match_start":48,"name":"plsc_2"},{"dbname":"SUPERFAMILY","id":"SSF69593","locations":[{"end":285,"start":196}],"match_end":285,"match_start":196,"name":"Glycerol-3-phosphate (1)-acyltransferase"},{"dbname":"PANTHER","id":"PTHR31605","interpro_description":"Glycerol-3-phosphate O-acyltransferase","interpro_id":"IPR052744","interpro_name":"GPAT/DAPAT","locations":[{"end":689,"start":7}],"match_end":689,"match_start":7,"name":"GLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":703,"start":629}],"match_end":703,"match_start":629,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":661,"start":643}],"match_end":661,"match_start":643,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":703,"start":690}],"match_end":703,"match_start":690,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":835346,"start_pos":833235,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":660,"start":642}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03305","ortholog_taxonid":4932,"ortholog_uniquename":"YBL011W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03305","ortholog_taxonid":4932,"ortholog_uniquename":"YKR067W","reference_uniquename":"PMID:26896847"}],"product":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1-like","references_by_uniquename":{"GO_REF:0000033":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004366","GO:0016287"]}},"subset_termids":["GO:0006629","GO:0016746"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004366":null,"GO:0008654":null,"GO:0016287":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":431,"start":409}},{"assigned_by":"TMHMM","range":{"end":474,"start":452}},{"assigned_by":"TMHMM","range":{"end":511,"start":489}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03305.1"],"transcripts_by_uniquename":{"SJAG_03305.1":null},"uniprot_identifier":"B6K3W3","uniquename":"SJAG_03305"}


id: SJAG_03306
data:
  {"coiled_coil_coords":[{"range":{"end":340,"start":313}}],"cv_annotations":{"biological_process":[{"annotations":[84434],"is_not":false,"summary":null,"term":"GO:0006532"},{"annotations":[84435],"is_not":false,"summary":null,"term":"GO:0006536"}],"cellular_component":[{"annotations":[84432],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84433],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84436],"is_not":false,"summary":null,"term":"GO:0004069"},{"annotations":[84437],"is_not":false,"summary":null,"term":"GO:0030170"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03306","EnsemblGenomes-Tr:EEB08171","InterPro:IPR015422","InterPro:IPR015424","UniProtKB/TrEMBL:B6K3W4","InterPro:IPR004839","GOA:B6K3W4","InterPro:IPR015421","InterPro:IPR000796"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ntr1","uniquename":"SJAG_03301"},{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"}],"genes_by_uniquename":{"HGNC:28487":null,"HGNC:4432":null,"SJAG_03306":null,"SPAC10F6.13c":null,"YLR027C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aminotransferase class I and II","id":"PF00155","interpro_description":"Aminotransferase, class I/classII, large domain","interpro_id":"IPR004839","interpro_name":"Aminotransferase_I/II_large","locations":[{"end":401,"start":32}],"match_end":401,"match_start":32,"name":"Aminotran_1_2"},{"dbname":"CDD","description":"AAT_like","id":"cd00609","locations":[{"end":401,"start":33}],"match_end":401,"match_start":33,"name":"AAT_like"},{"dbname":"PRINTS","description":"Aspartate aminotransferase signature","id":"PR00799","interpro_description":"Aspartate/other aminotransferase","interpro_id":"IPR000796","interpro_name":"Asp_trans","locations":[{"end":202,"start":183},{"end":226,"start":214},{"end":307,"start":282},{"end":368,"start":350}],"match_end":368,"match_start":183,"name":"TRANSAMINASE"},{"dbname":"FUNFAM","description":"Aspartate aminotransferase","id":"G3DSA:3.90.1150.10:FF:000001","locations":[{"end":401,"start":298}],"match_end":401,"match_start":298},{"dbname":"FUNFAM","description":"Aspartate aminotransferase","id":"G3DSA:3.40.640.10:FF:000064","locations":[{"end":309,"start":65}],"match_end":309,"match_start":65},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":406,"start":5}],"match_end":406,"match_start":5,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":309,"start":65}],"match_end":309,"match_start":65},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.10","interpro_description":"Pyridoxal phosphate-dependent transferase, small domain","interpro_id":"IPR015422","interpro_name":"PyrdxlP-dep_Trfase_small","locations":[{"end":64,"start":9},{"end":401,"start":310}],"match_end":401,"match_start":9,"name":"Aspartate Aminotransferase, domain 1"},{"dbname":"PANTHER","id":"PTHR11879","interpro_description":"Aspartate/other aminotransferase","interpro_id":"IPR000796","interpro_name":"Asp_trans","locations":[{"end":407,"start":6}],"match_end":407,"match_start":6,"name":"ASPARTATE AMINOTRANSFERASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":340,"start":313}],"match_end":340,"match_start":313,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":837982,"start_pos":836753,"strand":"reverse"},"name":"caa1","ortholog_annotations":[{"gene_uniquename":"SJAG_03306","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28487","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4432","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":4932,"ortholog_uniquename":"YLR027C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03306","ortholog_taxonid":4932,"ortholog_uniquename":"YLR027C","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic aspartate aminotransferase Caa1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0030170"],"NOT binding":["GO:0004069"]}},"subset_termids":["GO:0006520","GO:0016769","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004069":null,"GO:0005634":null,"GO:0005829":null,"GO:0006532":null,"GO:0006536":null,"GO:0030170":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03306.1"],"transcripts_by_uniquename":{"SJAG_03306.1":null},"uniprot_identifier":"B6K3W4","uniquename":"SJAG_03306"}


id: SJAG_03309
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84441],"is_not":false,"summary":null,"term":"GO:0035556"},{"annotations":[84442],"is_not":false,"summary":null,"term":"GO:1905287"},{"annotations":[84443],"is_not":false,"summary":null,"term":"GO:1900237"},{"annotations":[84444],"is_not":false,"summary":null,"term":"GO:1902472"}],"cellular_component":[{"annotations":[84439],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84440],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84445],"is_not":false,"summary":null,"term":"GO:0004865"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08172","GOA:B6K3W5","UniProtKB/TrEMBL:B6K3W5","InterPro:IPR006760","EnsemblGenomes-Gn:SJAG_03309"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":140,"start":54}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dsc2","uniquename":"SJAG_03302"},{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"}],"genes_by_uniquename":{"HGNC:16967":null,"HGNC:3360":null,"SJAG_03309":null,"SPAC10F6.16":null,"YHR132W-A":null,"YNL157W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"cAMP-regulated phosphoprotein/endosulfine conserved region","id":"PF04667","interpro_description":"Endosulphine","interpro_id":"IPR006760","interpro_name":"Endosulphine","locations":[{"end":86,"start":11}],"match_end":86,"match_start":11,"name":"Endosulfine"},{"dbname":"PANTHER","id":"PTHR10358","interpro_description":"Endosulphine","interpro_id":"IPR006760","interpro_name":"Endosulphine","locations":[{"end":98,"start":3}],"match_end":98,"match_start":3,"name":"ENDOSULFINE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":140,"start":54}],"match_end":140,"match_start":54,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":128,"start":107}],"match_end":128,"match_start":107,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":140,"start":129}],"match_end":140,"match_start":129,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":841783,"start_pos":840963,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":127,"start":81}}],"name":"igo1","ortholog_annotations":[{"gene_uniquename":"SJAG_03309","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16967","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3360","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132W-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132W-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YNL157W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03309","ortholog_taxonid":4932,"ortholog_uniquename":"YNL157W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase inhibitor, endosulfine Igo1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004865"]}},"subset_termids":["GO:0005634","GO:0000281","GO:0098772","GO:0044772","GO:0030234","GO:0023052","GO:0000747","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004865":null,"GO:0005634":null,"GO:0005829":null,"GO:0035556":null,"GO:1900237":null,"GO:1902472":null,"GO:1905287":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03309.1"],"transcripts_by_uniquename":{"SJAG_03309.1":null},"uniprot_identifier":"B6K3W5","uniquename":"SJAG_03309"}


id: SJAG_03310
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84447],"is_not":false,"summary":null,"term":"GO:0006086"},{"annotations":[84448],"is_not":false,"summary":null,"term":"GO:0006091"},{"annotations":[84449],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[84446],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[84450],"is_not":false,"summary":null,"term":"GO:0004741"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3W6","InterPro:IPR001932","GOA:B6K3W6","EnsemblGenomes-Gn:SJAG_03310","InterPro:IPR015655","InterPro:IPR036457","EnsemblGenomes-Tr:EEB08173"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sod2","uniquename":"SJAG_03303"},{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"}],"genes_by_uniquename":{"HGNC:30263":null,"HGNC:9279":null,"SJAG_03310":null,"SPAC10F6.17c":null,"YOR090C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein phosphatase 2C","id":"PF00481","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":388,"start":118}],"match_end":388,"match_start":118,"name":"PP2C"},{"dbname":"CDD","description":"PP2Cc","id":"cd00143","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":446,"start":104}],"match_end":446,"match_start":104,"name":"PP2Cc"},{"dbname":"PROSITE_PROFILES","description":"PPM-type phosphatase domain profile.","id":"PS51746","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":446,"start":93}],"match_end":446,"match_start":93,"name":"PPM_2"},{"dbname":"SMART","id":"SM00332","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":444,"start":85}],"match_end":444,"match_start":85,"name":"PP2C_4"},{"dbname":"SUPERFAMILY","id":"SSF81606","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":447,"start":104}],"match_end":447,"match_start":104,"name":"PP2C-like"},{"dbname":"GENE3D","id":"G3DSA:3.60.40.10","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":449,"start":67}],"match_end":449,"match_start":67},{"dbname":"PANTHER","id":"PTHR13832","interpro_description":"Protein phosphatase 2C","interpro_id":"IPR015655","interpro_name":"PP2C","locations":[{"end":443,"start":106}],"match_end":443,"match_start":106,"name":"PROTEIN PHOSPHATASE 2C"}],"location":{"chromosome_name":"supercont5.2","end_pos":843561,"start_pos":842209,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":39,"start":24}},{"range":{"end":225,"start":201}}],"name":"ptc5","ortholog_annotations":[{"gene_uniquename":"SJAG_03310","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30263","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9279","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":4932,"ortholog_uniquename":"YOR090C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03310","ortholog_taxonid":4932,"ortholog_uniquename":"YOR090C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004741"]}},"subset_termids":["GO:0006091","GO:0006790","GO:0055086","GO:0004721","GO:0016788","GO:0140096","GO:0023052","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004741":null,"GO:0005739":null,"GO:0006086":null,"GO:0006091":null,"GO:0007165":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03310.1"],"transcripts_by_uniquename":{"SJAG_03310.1":null},"uniprot_identifier":"B6K3W6","uniquename":"SJAG_03310"}


id: SJAG_03311
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94916],"is_not":false,"summary":null,"term":"GO:0006488"}],"cellular_component":[{"annotations":[94914],"is_not":false,"summary":null,"term":"GO:0098554"},{"annotations":[94915],"is_not":false,"summary":null,"term":"GO:0043541"}],"molecular_function":[{"annotations":[94917],"is_not":false,"summary":null,"term":"GO:0004577"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03311","EnsemblGenomes-Tr:EEB08174","GOA:B6K3W7","InterPro:IPR007235","UniProtKB/TrEMBL:B6K3W7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03304"},{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"}],"genes_by_uniquename":{"HGNC:30881":null,"SJAG_03311":null,"SPAC56E4.02c":null,"YGL047W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyltransferase family 28 C-terminal domain","id":"PF04101","interpro_description":"Glycosyl transferase, family 28, C-terminal","interpro_id":"IPR007235","interpro_name":"Glyco_trans_28_C","locations":[{"end":160,"start":5}],"match_end":160,"match_start":5,"name":"Glyco_tran_28_C"},{"dbname":"SUPERFAMILY","id":"SSF53756","locations":[{"end":133,"start":36}],"match_end":133,"match_start":36,"name":"UDP-Glycosyltransferase/glycogen phosphorylase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2000","locations":[{"end":164,"start":2}],"match_end":164,"match_start":2,"name":"Glycogen Phosphorylase B;"},{"dbname":"PANTHER","id":"PTHR12867","interpro_description":"UDP-N-acetylglucosamine transferase subunit Alg13-like","interpro_id":"IPR039042","interpro_name":"Alg13-like","locations":[{"end":163,"start":4}],"match_end":163,"match_start":4,"name":"GLYCOSYL TRANSFERASE-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":844304,"start_pos":843807,"strand":"reverse"},"name":"alg13","ortholog_annotations":[{"gene_uniquename":"SJAG_03311","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30881","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03311","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03311","ortholog_taxonid":4932,"ortholog_uniquename":"YGL047W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03311","ortholog_taxonid":4932,"ortholog_uniquename":"YGL047W","reference_uniquename":"PMID:26896847"}],"product":"N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase Alg13","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0004577"]}},"subset_termids":["GO:0006486","GO:0005789","GO:0016757","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004577":null,"GO:0006488":null,"GO:0043541":null,"GO:0098554":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03311.1"],"transcripts_by_uniquename":{"SJAG_03311.1":null},"uniprot_identifier":"B6K3W7","uniquename":"SJAG_03311"}


id: SJAG_03312
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94920],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[94921],"is_not":false,"summary":null,"term":"GO:0019878"},{"annotations":[94922],"is_not":false,"summary":null,"term":"GO:0006571"}],"cellular_component":[{"annotations":[94918],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94919],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94923],"is_not":false,"summary":null,"term":"GO:0047536"},{"annotations":[94924],"is_not":false,"summary":null,"term":"GO:0080130"},{"annotations":[94925],"is_not":false,"summary":null,"term":"GO:0030170"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08175","InterPro:IPR004839","InterPro:IPR015421","UniProtKB/TrEMBL:B6K3W8","InterPro:IPR015424","GOA:B6K3W8","EnsemblGenomes-Gn:SJAG_03312"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":21,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03305"},{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"}],"genes_by_uniquename":{"HGNC:17929":null,"SJAG_03312":null,"SPAC56E4.03":null,"YGL202W":null,"YHR137W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aminotransferase class I and II","id":"PF00155","interpro_description":"Aminotransferase, class I/classII, large domain","interpro_id":"IPR004839","interpro_name":"Aminotransferase_I/II_large","locations":[{"end":466,"start":130}],"match_end":466,"match_start":130,"name":"Aminotran_1_2"},{"dbname":"CDD","description":"AAT_like","id":"cd00609","locations":[{"end":468,"start":99}],"match_end":468,"match_start":99,"name":"AAT_like"},{"dbname":"FUNFAM","description":"Aromatic amino acid aminotransferase","id":"G3DSA:3.40.640.10:FF:000074","locations":[{"end":475,"start":1}],"match_end":475,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":472,"start":36}],"match_end":472,"match_start":36,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":475,"start":1}],"match_end":475,"match_start":1},{"dbname":"PANTHER","id":"PTHR42790","interpro_description":"Class-I pyridoxal-phosphate-dependent aminotransferase-like","interpro_id":"IPR050859","interpro_name":"Class-I_PLP-dep_aminotransf","locations":[{"end":474,"start":5}],"match_end":474,"match_start":5,"name":"AMINOTRANSFERASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":21,"start":1}],"match_end":21,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":846637,"start_pos":845210,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03312","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17929","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03312","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03312","ortholog_taxonid":4932,"ortholog_uniquename":"YGL202W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03312","ortholog_taxonid":4932,"ortholog_uniquename":"YHR137W","reference_uniquename":"PMID:29761456"}],"product":"aromatic aminotransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0030170"],"NOT binding":["GO:0080130","GO:0047536"]}},"subset_termids":["GO:0005829","GO:0006520","GO:0016769","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006571":null,"GO:0009074":null,"GO:0019878":null,"GO:0030170":null,"GO:0047536":null,"GO:0080130":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03312.1"],"transcripts_by_uniquename":{"SJAG_03312.1":null},"uniprot_identifier":"B6K3W8","uniquename":"SJAG_03312"}


id: SJAG_03313
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94930],"is_not":false,"summary":null,"term":"GO:0006633"},{"annotations":[94931],"is_not":false,"summary":null,"term":"GO:2001295"},{"annotations":[94932],"is_not":false,"summary":null,"term":"GO:0101026"}],"cellular_component":[{"annotations":[94926],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[94927],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94928],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[94929],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[94933],"is_not":false,"summary":null,"term":"GO:0003989"},{"annotations":[94934],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[94935],"is_not":false,"summary":null,"term":"GO:0004075"},{"annotations":[94936],"is_not":false,"summary":null,"term":"GO:0046872"}]},"dbxrefs":["InterPro:IPR011764","InterPro:IPR011054","InterPro:IPR001882","InterPro:IPR013815","InterPro:IPR011763","InterPro:IPR016185","InterPro:IPR005482","EnsemblGenomes-Gn:SJAG_03313","InterPro:IPR011761","InterPro:IPR000089","InterPro:IPR013537","GOA:B6K3W9","InterPro:IPR011053","InterPro:IPR029045","EnsemblGenomes-Tr:EEB08176","InterPro:IPR005479","InterPro:IPR011762","UniProtKB/TrEMBL:B6K3W9","InterPro:IPR034733","InterPro:IPR005481"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"caa1","uniquename":"SJAG_03306"},{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"}],"genes_by_uniquename":{"HGNC:84":null,"HGNC:85":null,"SJAG_03313":null,"SPAC56E4.04c":null,"YMR207C":null,"YNR016C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyl-CoA carboxylase, BT domain","id":"PF21385","interpro_description":"Acetyl-CoA carboxylase, BT domain","interpro_id":"IPR049074","interpro_name":"ACCA_BT","locations":[{"end":723,"start":604}],"match_end":723,"match_start":604,"name":"ACCA_BT"},{"dbname":"PFAM","description":"Carboxyl transferase domain","id":"PF01039","interpro_description":"Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta","interpro_id":"IPR034733","interpro_name":"AcCoA_carboxyl_beta","locations":[{"end":2180,"start":1626}],"match_end":2180,"match_start":1626,"name":"Carboxyl_trans"},{"dbname":"PFAM","description":"Biotin-requiring enzyme","id":"PF00364","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":794,"start":730}],"match_end":794,"match_start":730,"name":"Biotin_lipoyl"},{"dbname":"PFAM","description":"Carbamoyl-phosphate synthase L chain, ATP binding domain","id":"PF02786","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":441,"start":257}],"match_end":441,"match_start":257,"name":"CPSase_L_D2"},{"dbname":"PFAM","description":"Biotin carboxylase, N-terminal domain","id":"PF00289","interpro_description":"Biotin carboxylase-like, N-terminal domain","interpro_id":"IPR005481","interpro_name":"BC-like_N","locations":[{"end":208,"start":87}],"match_end":208,"match_start":87,"name":"Biotin_carb_N"},{"dbname":"PFAM","description":"Acetyl-CoA carboxylase, central region","id":"PF08326","interpro_description":"Acetyl-CoA carboxylase, central domain","interpro_id":"IPR013537","interpro_name":"AcCoA_COase_cen","locations":[{"end":1530,"start":796}],"match_end":1530,"match_start":796,"name":"ACC_central"},{"dbname":"PFAM","description":"Biotin carboxylase C-terminal domain","id":"PF02785","interpro_description":"Biotin carboxylase, C-terminal","interpro_id":"IPR005482","interpro_name":"Biotin_COase_C","locations":[{"end":591,"start":485}],"match_end":591,"match_start":485,"name":"Biotin_carb_C"},{"dbname":"CDD","description":"biotinyl_domain","id":"cd06850","locations":[{"end":795,"start":730}],"match_end":795,"match_start":730,"name":"biotinyl_domain"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 1.","id":"PS00866","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":289,"start":275}],"match_end":289,"match_start":275,"name":"CPSASE_1"},{"dbname":"PROSITE_PATTERNS","description":"Biotin-requiring enzymes attachment site.","id":"PS00188","interpro_description":"Biotin-binding site","interpro_id":"IPR001882","interpro_name":"Biotin_BS","locations":[{"end":770,"start":753}],"match_end":770,"match_start":753,"name":"BIOTIN"},{"dbname":"PROSITE_PATTERNS","description":"Carbamoyl-phosphate synthase subdomain signature 2.","id":"PS00867","interpro_description":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_id":"IPR005479","interpro_name":"CbamoylP_synth_lsu-like_ATP-bd","locations":[{"end":412,"start":405}],"match_end":412,"match_start":405,"name":"CPSASE_2"},{"dbname":"PROSITE_PROFILES","description":"ATP-grasp fold profile.","id":"PS50975","interpro_description":"ATP-grasp fold","interpro_id":"IPR011761","interpro_name":"ATP-grasp","locations":[{"end":436,"start":244}],"match_end":436,"match_start":244,"name":"ATP_GRASP"},{"dbname":"PROSITE_PROFILES","description":"Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.","id":"PS50989","interpro_description":"Acetyl-coenzyme A carboxyltransferase, C-terminal","interpro_id":"IPR011763","interpro_name":"COA_CT_C","locations":[{"end":2191,"start":1877}],"match_end":2191,"match_start":1877,"name":"COA_CT_CTER"},{"dbname":"PROSITE_PROFILES","description":"Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.","id":"PS50980","interpro_description":"Acetyl-coenzyme A carboxyltransferase, N-terminal","interpro_id":"IPR011762","interpro_name":"COA_CT_N","locations":[{"end":1873,"start":1537}],"match_end":1873,"match_start":1537,"name":"COA_CT_NTER"},{"dbname":"PROSITE_PROFILES","description":"Biotin carboxylation domain profile.","id":"PS50979","interpro_description":"Biotin carboxylation domain","interpro_id":"IPR011764","interpro_name":"Biotin_carboxylation_dom","locations":[{"end":595,"start":86}],"match_end":595,"match_start":86,"name":"BC"},{"dbname":"PROSITE_PROFILES","description":"Biotinyl/lipoyl domain profile.","id":"PS50968","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":796,"start":722}],"match_end":796,"match_start":722,"name":"BIOTINYL_LIPOYL"},{"dbname":"SMART","id":"SM00878","interpro_description":"Biotin carboxylase, C-terminal","interpro_id":"IPR005482","interpro_name":"Biotin_COase_C","locations":[{"end":591,"start":484}],"match_end":591,"match_start":484,"name":"Biotin_carb_C_2"},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase 1","id":"G3DSA:2.40.460.10:FF:000001","locations":[{"end":1749,"start":1682}],"match_end":1749,"match_start":1682},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase isoform X2","id":"G3DSA:3.40.50.20:FF:000005","locations":[{"end":213,"start":63}],"match_end":213,"match_start":63},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase 1","id":"G3DSA:3.30.470.20:FF:000005","locations":[{"end":577,"start":322}],"match_end":577,"match_start":322},{"dbname":"FUNFAM","description":"Acetyl-CoA carboxylase 1","id":"G3DSA:2.40.50.100:FF:000005","locations":[{"end":797,"start":726}],"match_end":797,"match_start":726},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase 1","id":"G3DSA:3.90.1770.10:FF:000001","locations":[{"end":258,"start":214}],"match_end":258,"match_start":214},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase isoform X1","id":"G3DSA:3.30.1490.20:FF:000003","locations":[{"end":320,"start":236}],"match_end":320,"match_start":236},{"dbname":"FUNFAM","description":"acetyl-CoA carboxylase isoform X2","id":"G3DSA:3.90.226.10:FF:000010","locations":[{"end":2263,"start":1866}],"match_end":2263,"match_start":1866},{"dbname":"SUPERFAMILY","id":"SSF52096","interpro_description":"ClpP/crotonase-like domain superfamily","interpro_id":"IPR029045","interpro_name":"ClpP/crotonase-like_dom_sf","locations":[{"end":2252,"start":1538}],"match_end":2252,"match_start":1538,"name":"ClpP/crotonase"},{"dbname":"SUPERFAMILY","id":"SSF51246","interpro_description":"Rudiment single hybrid motif","interpro_id":"IPR011054","interpro_name":"Rudment_hybrid_motif","locations":[{"end":595,"start":478}],"match_end":595,"match_start":478,"name":"Rudiment single hybrid motif"},{"dbname":"SUPERFAMILY","id":"SSF52440","interpro_description":"Pre-ATP-grasp domain superfamily","interpro_id":"IPR016185","interpro_name":"PreATP-grasp_dom_sf","locations":[{"end":211,"start":71}],"match_end":211,"match_start":71,"name":"PreATP-grasp domain"},{"dbname":"SUPERFAMILY","id":"SSF51230","interpro_description":"Single hybrid motif","interpro_id":"IPR011053","interpro_name":"Single_hybrid_motif","locations":[{"end":795,"start":722}],"match_end":795,"match_start":722,"name":"Single hybrid motif"},{"dbname":"SUPERFAMILY","id":"SSF56059","locations":[{"end":471,"start":212}],"match_end":471,"match_start":212,"name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.40.460.10","locations":[{"end":1749,"start":1682}],"match_end":1749,"match_start":1682,"name":"Biotin dependent carboxylase carboxyltransferase"},{"dbname":"GENE3D","id":"G3DSA:3.90.1770.10","locations":[{"end":258,"start":214}],"match_end":258,"match_start":214},{"dbname":"GENE3D","id":"G3DSA:3.30.470.20","locations":[{"end":577,"start":322}],"match_end":577,"match_start":322},{"dbname":"GENE3D","id":"G3DSA:3.90.226.10","locations":[{"end":1681,"start":1537},{"end":1862,"start":1750},{"end":2262,"start":1866}],"match_end":2262,"match_start":1537},{"dbname":"GENE3D","id":"G3DSA:3.40.50.20","locations":[{"end":213,"start":54}],"match_end":213,"match_start":54},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.20","interpro_description":"ATP-grasp fold, subdomain 1","interpro_id":"IPR013815","interpro_name":"ATP_grasp_subdomain_1","locations":[{"end":321,"start":259}],"match_end":321,"match_start":259},{"dbname":"GENE3D","id":"G3DSA:2.40.50.100","locations":[{"end":797,"start":726}],"match_end":797,"match_start":726},{"dbname":"PANTHER","id":"PTHR45728","interpro_description":"Acetyl-CoA carboxylase","interpro_id":"IPR049076","interpro_name":"ACCA","locations":[{"end":2286,"start":62}],"match_end":2286,"match_start":62,"name":"ACETYL-COA CARBOXYLASE, ISOFORM A"}],"location":{"chromosome_name":"supercont5.2","end_pos":854150,"start_pos":847281,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":26,"start":15}},{"range":{"end":35,"start":30}},{"range":{"end":1143,"start":1125}},{"range":{"end":1183,"start":1170}},{"range":{"end":2179,"start":2168}}],"name":"cut6","ortholog_annotations":[{"gene_uniquename":"SJAG_03313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:84","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:85","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":4932,"ortholog_uniquename":"YMR207C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03313","ortholog_taxonid":4932,"ortholog_uniquename":"YNR016C","reference_uniquename":"PMID:29761456"}],"product":"acetyl-CoA/biotin carboxylase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0005524","GO:0046872"],"NOT binding":["GO:0003989","GO:0004075"]}},"subset_termids":["GO:0061024","GO:0055086","GO:0006790","GO:0016874","GO:0006629","GO:0005829","GO:0005773","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0003989":null,"GO:0004075":null,"GO:0005524":null,"GO:0005737":null,"GO:0005739":null,"GO:0005829":null,"GO:0006633":null,"GO:0046872":null,"GO:0101026":null,"GO:2001295":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03313.1"],"transcripts_by_uniquename":{"SJAG_03313.1":null},"uniprot_identifier":"B6K3W9","uniquename":"SJAG_03313"}


id: SJAG_03315
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94939],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[94940],"is_not":false,"summary":null,"term":"GO:0045047"}],"cellular_component":[{"annotations":[94937],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[94938],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[64899],"is_not":false,"summary":null,"term":"GO:0005773"}]},"dbxrefs":["GOA:B6K3X0","EnsemblGenomes-Gn:SJAG_03315","UniProtKB/TrEMBL:B6K3X0","EnsemblGenomes-Tr:EEB08177","InterPro:IPR008506"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":179,"start":149}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"igo1","uniquename":"SJAG_03309"},{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"}],"genes_by_uniquename":{"HGNC:25015":null,"SJAG_03315":null,"SPAC56E4.05":null,"YLR065C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SRP-independent targeting protein 2/TMEM208","id":"PF05620","interpro_description":"SRP-independent targeting protein 2/TMEM208","interpro_id":"IPR008506","interpro_name":"SND2/TMEM208","locations":[{"end":175,"start":1}],"match_end":175,"match_start":1,"name":"TMEM208_SND2"},{"dbname":"PANTHER","id":"PTHR13505","interpro_description":"SRP-independent targeting protein 2/TMEM208","interpro_id":"IPR008506","interpro_name":"SND2/TMEM208","locations":[{"end":178,"start":1}],"match_end":178,"match_start":1,"name":"TRANSMEMBRANE PROTEIN 208"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":179,"start":149}],"match_end":179,"match_start":149,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":179,"start":166}],"match_end":179,"match_start":166,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":856236,"start_pos":855613,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":120,"start":104}},{"range":{"end":178,"start":164}}],"name":"snd2","ortholog_annotations":[{"gene_uniquename":"SJAG_03315","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25015","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03315","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03315","ortholog_taxonid":4932,"ortholog_uniquename":"YLR065C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03315","ortholog_taxonid":4932,"ortholog_uniquename":"YLR065C","reference_uniquename":"PMID:26896847"}],"product":"SRP-independent ER targeting protein Snd2","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006605","GO:0005773","GO:0005783","GO:0061024","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005773":null,"GO:0005783":null,"GO:0005789":null,"GO:0045047":null,"GO:0045048":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":38,"start":21}},{"assigned_by":"TMHMM","range":{"end":108,"start":86}},{"assigned_by":"TMHMM","range":{"end":134,"start":115}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03315.1"],"transcripts_by_uniquename":{"SJAG_03315.1":null},"uniprot_identifier":"B6K3X0","uniquename":"SJAG_03315"}


id: SJAG_03316
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94943],"is_not":false,"summary":null,"term":"GO:1990748"},{"annotations":[94944],"is_not":false,"summary":null,"term":"GO:0006751"}],"cellular_component":[{"annotations":[94941],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[94942],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[94945],"is_not":false,"summary":null,"term":"GO:0036374"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3X1","GOA:B6K3X1","EnsemblGenomes-Tr:EEB08178","EnsemblGenomes-Gn:SJAG_03316","InterPro:IPR000101","InterPro:IPR029055"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ptc5","uniquename":"SJAG_03310"},{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"}],"genes_by_uniquename":{"HGNC:16437":null,"HGNC:18596":null,"HGNC:33426":null,"HGNC:4250":null,"HGNC:4252":null,"HGNC:4260":null,"SJAG_03316":null,"SPAC56E4.06c":null,"YLR299W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gamma-glutamyltranspeptidase","id":"PF01019","locations":[{"end":596,"start":91}],"match_end":596,"match_start":91,"name":"G_glu_transpept"},{"dbname":"PRINTS","description":"Gamma-glutamyltranspeptidase signature","id":"PR01210","locations":[{"end":123,"start":98},{"end":203,"start":166},{"end":299,"start":283},{"end":331,"start":312},{"end":429,"start":411},{"end":453,"start":435},{"end":490,"start":475},{"end":518,"start":501}],"match_end":518,"match_start":98,"name":"GGTRANSPTASE"},{"dbname":"FUNFAM","description":"Gamma-glutamyltransferase 5 isoform 1","id":"G3DSA:1.10.246.130:FF:000001","locations":[{"end":403,"start":299}],"match_end":403,"match_start":299},{"dbname":"FUNFAM","description":"Gamma-glutamyltranspeptidase 1","id":"G3DSA:3.60.20.40:FF:000001","locations":[{"end":601,"start":405}],"match_end":601,"match_start":405},{"dbname":"SUPERFAMILY","id":"SSF56235","interpro_description":"Nucleophile aminohydrolases, N-terminal","interpro_id":"IPR029055","interpro_name":"Ntn_hydrolases_N","locations":[{"end":600,"start":71}],"match_end":600,"match_start":71,"name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"GENE3D","id":"G3DSA:1.10.246.130","interpro_description":"Gamma-glutamyltranspeptidase, large subunit, C-terminal domain","interpro_id":"IPR043138","interpro_name":"GGT_lsub_C","locations":[{"end":403,"start":299}],"match_end":403,"match_start":299},{"dbname":"GENE3D","id":"G3DSA:3.60.20.40","interpro_description":"Gamma-glutamyltranspeptidase, small subunit","interpro_id":"IPR043137","interpro_name":"GGT_ssub","locations":[{"end":600,"start":405}],"match_end":600,"match_start":405},{"dbname":"PANTHER","id":"PTHR11686","interpro_description":"Gamma-glutamyltranspeptidase","interpro_id":"IPR000101","interpro_name":"GGT_peptidase","locations":[{"end":600,"start":50}],"match_end":600,"match_start":50,"name":"GAMMA GLUTAMYL TRANSPEPTIDASE"},{"dbname":"NCBIFAM","description":"gamma-glutamyltransferase","id":"TIGR00066","interpro_description":"Gamma-glutamyltranspeptidase","interpro_id":"IPR000101","interpro_name":"GGT_peptidase","locations":[{"end":593,"start":83}],"match_end":593,"match_start":83,"name":"g_glut_trans"}],"location":{"chromosome_name":"supercont5.2","end_pos":858320,"start_pos":856515,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":56,"start":46}},{"range":{"end":71,"start":62}},{"range":{"end":124,"start":114}}],"name":"ggt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16437","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18596","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:33426","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4250","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4252","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4260","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":4932,"ortholog_uniquename":"YLR299W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03316","ortholog_taxonid":4932,"ortholog_uniquename":"YLR299W","reference_uniquename":"PMID:26896847"}],"product":"gamma-glutamyltranspeptidase Ggt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0036374"]}},"subset_termids":["GO:0008233","GO:0098754","GO:0005773","GO:0005886","GO:0006790","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005886":null,"GO:0006751":null,"GO:0036374":null,"GO:1990748":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":57,"start":38}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03316.1"],"transcripts_by_uniquename":{"SJAG_03316.1":null},"uniprot_identifier":"B6K3X1","uniquename":"SJAG_03316"}


id: SJAG_03318
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[94946],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[94947],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[94948],"is_not":false,"summary":null,"term":"GO:0016747"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08179","GOA:B6K3X2","UniProtKB/TrEMBL:B6K3X2","EnsemblGenomes-Gn:SJAG_03318","InterPro:IPR000182","InterPro:IPR016181"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alg13","uniquename":"SJAG_03311"},{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"}],"genes_by_uniquename":{"SJAG_03318":null,"SPAC56E4.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyltransferase (GNAT) domain","id":"PF13673","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":210,"start":145}],"match_end":210,"match_start":145,"name":"Acetyltransf_10"},{"dbname":"CDD","description":"NAT_SF","id":"cd04301","locations":[{"end":190,"start":148}],"match_end":190,"match_start":148,"name":"NAT_SF"},{"dbname":"SUPERFAMILY","id":"SSF55729","interpro_description":"Acyl-CoA N-acyltransferase","interpro_id":"IPR016181","interpro_name":"Acyl_CoA_acyltransferase","locations":[{"end":102,"start":14},{"end":211,"start":145}],"match_end":211,"match_start":14,"name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":236,"start":13}],"match_end":236,"match_start":13},{"dbname":"PANTHER","id":"PTHR42791","interpro_description":"Trichothecene Biosynthesis Acetyltransferases","interpro_id":"IPR052523","interpro_name":"Trichothecene_AcTrans","locations":[{"end":218,"start":14}],"match_end":218,"match_start":14,"name":"GNAT FAMILY ACETYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":860869,"start_pos":860144,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03318","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56E4.07","reference_uniquename":"PMID:21511999"}],"product":"N-acetyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0016747"]}},"subset_termids":["GO:0005794","GO:0005783","GO:0016746"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005794":null,"GO:0016747":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":122,"start":105}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03318.1"],"transcripts_by_uniquename":{"SJAG_03318.1":null},"uniprot_identifier":"B6K3X2","uniquename":"SJAG_03318"}


id: SJAG_03319
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85428],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[85429],"is_not":false,"summary":null,"term":"GO:0031930"},{"annotations":[85430],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[85431],"is_not":false,"summary":null,"term":"GO:0006808"}],"cellular_component":[{"annotations":[85427],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08180","InterPro:IPR013860","EnsemblGenomes-Gn:SJAG_03319","InterPro:IPR021711","UniProtKB/TrEMBL:B6K3X3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":202,"start":177}},{"range":{"end":381,"start":323}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03312"},{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"}],"genes_by_uniquename":{"SJAG_03319":null,"SPAC1420.01c":null,"YNL076W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Fungal protein of unknown function (DUF1752)","id":"PF08550","interpro_description":"Nitrogen regulatory protein areA, GATA-like domain","interpro_id":"IPR013860","interpro_name":"AreA_GATA","locations":[{"end":60,"start":33}],"match_end":60,"match_start":33,"name":"DUF1752"},{"dbname":"PFAM","description":"Protein of unknown function (DUF3295)","id":"PF11702","interpro_description":"Domain of unknown function DUF3295","interpro_id":"IPR021711","interpro_name":"DUF3295","locations":[{"end":508,"start":332}],"match_end":508,"match_start":332,"name":"DUF3295"},{"dbname":"PANTHER","id":"PTHR28014","interpro_description":"Ras-cAMP pathway regulatory protein","interpro_id":"IPR053043","interpro_name":"Ras-cAMP_regulatory","locations":[{"end":517,"start":200}],"match_end":517,"match_start":200,"name":"NEGATIVE REGULATOR OF RAS-CAMP PATHWAY"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":202,"start":177},{"end":381,"start":323}],"match_end":381,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":349,"start":339}],"match_end":349,"match_start":339,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":863158,"start_pos":861513,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":125,"start":112}},{"range":{"end":144,"start":129}},{"range":{"end":272,"start":262}},{"range":{"end":348,"start":338}}],"name":"mks1","ortholog_annotations":[{"gene_uniquename":"SJAG_03319","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03319","ortholog_taxonid":4932,"ortholog_uniquename":"YNL076W","reference_uniquename":"PMID:29761456"}],"product":"GATA-like domain protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0023052","GO:0006355","GO:0006351","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0005829":null,"GO:0006808":null,"GO:0031930":null,"GO:0034605":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03319.1"],"transcripts_by_uniquename":{"SJAG_03319.1":null},"uniprot_identifier":"B6K3X3","uniquename":"SJAG_03319"}


id: SJAG_03320
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85435],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[85432],"is_not":false,"summary":null,"term":"GO:0005832"},{"annotations":[85433],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85434],"is_not":false,"summary":null,"term":"GO:0005856"}],"molecular_function":[{"annotations":[85436],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[85437],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[85438],"is_not":false,"summary":null,"term":"GO:0140662"},{"annotations":[79076],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["InterPro:IPR002423","InterPro:IPR027413","UniProtKB/TrEMBL:B6K3X4","InterPro:IPR027409","GOA:B6K3X4","InterPro:IPR002194","EnsemblGenomes-Gn:SJAG_03320","InterPro:IPR017998","InterPro:IPR027410","EnsemblGenomes-Tr:EEB08181"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut6","uniquename":"SJAG_03313"},{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"}],"genes_by_uniquename":{"HGNC:1618":null,"SJAG_03320":null,"SPAC1420.02c":null,"YJR064W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TCP-1/cpn60 chaperonin family","id":"PF00118","interpro_description":"Chaperonin Cpn60/GroEL/TCP-1 family","interpro_id":"IPR002423","interpro_name":"Cpn60/GroEL/TCP-1","locations":[{"end":541,"start":49}],"match_end":541,"match_start":49,"name":"Cpn60_TCP1"},{"dbname":"CDD","description":"TCP1_epsilon","id":"cd03339","interpro_description":"T-complex protein 1, epsilon subunit","interpro_id":"IPR012718","interpro_name":"Chap_CCT_epsi","locations":[{"end":540,"start":15}],"match_end":540,"match_start":15,"name":"TCP1_epsilon"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 1.","id":"PS00750","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":66,"start":54}],"match_end":66,"match_start":54,"name":"TCP1_1"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 3.","id":"PS00995","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":111,"start":103}],"match_end":111,"match_start":103,"name":"TCP1_3"},{"dbname":"PROSITE_PATTERNS","description":"Chaperonins TCP-1 signature 2.","id":"PS00751","interpro_description":"Chaperonin TCP-1, conserved site","interpro_id":"IPR002194","interpro_name":"Chaperonin_TCP-1_CS","locations":[{"end":91,"start":75}],"match_end":91,"match_start":75,"name":"TCP1_2"},{"dbname":"PRINTS","description":"Tailless complex polypeptide 1 (chaperone) signature","id":"PR00304","interpro_description":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_id":"IPR017998","interpro_name":"Chaperone_TCP-1","locations":[{"end":67,"start":51},{"end":91,"start":73},{"end":122,"start":103},{"end":411,"start":389},{"end":435,"start":423}],"match_end":435,"match_start":51,"name":"TCOMPLEXTCP1"},{"dbname":"FUNFAM","description":"T-complex protein 1 subunitTheta, putative","id":"G3DSA:1.10.560.10:FF:000049","locations":[{"end":539,"start":422}],"match_end":539,"match_start":422},{"dbname":"FUNFAM","description":"T-complex protein 1 subunit delta","id":"G3DSA:1.10.560.10:FF:000053","locations":[{"end":159,"start":42}],"match_end":159,"match_start":42},{"dbname":"FUNFAM","description":"T-complex protein 1 subunit epsilon","id":"G3DSA:3.50.7.10:FF:000003","locations":[{"end":385,"start":231}],"match_end":385,"match_start":231},{"dbname":"SUPERFAMILY","id":"SSF48592","interpro_description":"GroEL-like equatorial domain superfamily","interpro_id":"IPR027413","interpro_name":"GROEL-like_equatorial_sf","locations":[{"end":160,"start":30},{"end":540,"start":421}],"match_end":540,"match_start":30,"name":"GroEL equatorial domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52029","interpro_description":"GroEL-like apical domain superfamily","interpro_id":"IPR027409","interpro_name":"GroEL-like_apical_dom_sf","locations":[{"end":394,"start":226}],"match_end":394,"match_start":226,"name":"GroEL apical domain-like"},{"dbname":"SUPERFAMILY","id":"SSF54849","interpro_description":"TCP-1-like chaperonin intermediate domain superfamily","interpro_id":"IPR027410","interpro_name":"TCP-1-like_intermed_sf","locations":[{"end":230,"start":166},{"end":420,"start":384}],"match_end":420,"match_start":166,"name":"GroEL-intermediate domain like"},{"dbname":"GENE3D","id":"G3DSA:1.10.560.10","interpro_description":"GroEL-like equatorial domain superfamily","interpro_id":"IPR027413","interpro_name":"GROEL-like_equatorial_sf","locations":[{"end":158,"start":46},{"end":539,"start":422}],"match_end":539,"match_start":46},{"dbname":"GENE3D","id":"G3DSA:3.50.7.10","interpro_description":"GroEL-like apical domain superfamily","interpro_id":"IPR027409","interpro_name":"GroEL-like_apical_dom_sf","locations":[{"end":385,"start":231}],"match_end":385,"match_start":231,"name":"GroEL"},{"dbname":"GENE3D","id":"G3DSA:3.30.260.10","interpro_description":"TCP-1-like chaperonin intermediate domain superfamily","interpro_id":"IPR027410","interpro_name":"TCP-1-like_intermed_sf","locations":[{"end":230,"start":159},{"end":421,"start":386}],"match_end":421,"match_start":159},{"dbname":"PANTHER","id":"PTHR11353","interpro_description":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_id":"IPR017998","interpro_name":"Chaperone_TCP-1","locations":[{"end":541,"start":35}],"match_end":541,"match_start":35,"name":"CHAPERONIN"},{"dbname":"NCBIFAM","description":"thermosome subunit beta","id":"NF041083","interpro_description":"TCP-1 chaperonin-containing T-complex","interpro_id":"IPR053374","interpro_name":"TCP-1_chaperonin","locations":[{"end":541,"start":28}],"match_end":541,"match_start":28,"name":"thermosome_beta"},{"dbname":"NCBIFAM","description":"thermosome subunit alpha","id":"NF041082","interpro_description":"Thermosome subunit alpha","interpro_id":"IPR054827","interpro_name":"thermosome_alpha","locations":[{"end":541,"start":28}],"match_end":541,"match_start":28,"name":"thermosome_alpha"},{"dbname":"NCBIFAM","description":"T-complex protein 1 subunit epsilon","id":"TIGR02343","interpro_description":"T-complex protein 1, epsilon subunit","interpro_id":"IPR012718","interpro_name":"Chap_CCT_epsi","locations":[{"end":540,"start":12}],"match_end":540,"match_start":12,"name":"chap_CCT_epsi"}],"location":{"chromosome_name":"supercont5.2","end_pos":865572,"start_pos":863824,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":124,"start":109}}],"name":"cct5","ortholog_annotations":[{"gene_uniquename":"SJAG_03320","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1618","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03320","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03320","ortholog_taxonid":4932,"ortholog_uniquename":"YJR064W","reference_uniquename":"PMID:29761456"}],"product":"chaperonin-containing T-complex epsilon subunit Cct5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0051082","GO:0005524"],"NOT binding":["GO:0016887","GO:0140662"]}},"subset_termids":["GO:0006457","GO:0016887","GO:0005829","GO:0051604","GO:0051082"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005737":null,"GO:0005832":null,"GO:0005856":null,"GO:0006457":null,"GO:0016887":null,"GO:0051082":null,"GO:0140662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03320.1"],"transcripts_by_uniquename":{"SJAG_03320.1":null},"uniprot_identifier":"B6K3X4","uniquename":"SJAG_03320"}


id: SJAG_03321
data:
  {"coiled_coil_coords":[{"range":{"end":109,"start":89}},{"range":{"end":174,"start":154}}],"cv_annotations":{"biological_process":[{"annotations":[85445,98205],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[98200],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85439],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85440],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[85441,98201],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[85442,98202],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[85443,98203],"is_not":false,"summary":null,"term":"GO:0000502"},{"annotations":[85444,98204],"is_not":false,"summary":null,"term":"GO:0008541"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03321","InterPro:IPR040896","UniProtKB/TrEMBL:B6K3X5","InterPro:IPR040134","EnsemblGenomes-Tr:EEB08182","GOA:B6K3X5","InterPro:IPR000717","InterPro:IPR036390","InterPro:IPR036388","InterPro:IPR035297"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"snd2","uniquename":"SJAG_03315"},{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"}],"genes_by_uniquename":{"HGNC:9557":null,"SJAG_03321":null,"SPAC1420.03":null,"SPAPB8E5.02c":null,"YDL147W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PCI domain","id":"PF01399","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":420,"start":352}],"match_end":420,"match_start":352,"name":"PCI"},{"dbname":"PFAM","description":"26S proteasome regulatory subunit RPN5 C-terminal domain","id":"PF18098","interpro_description":"26S proteasome regulatory subunit RPN5, C-terminal domain","interpro_id":"IPR040896","interpro_name":"RPN5_C","locations":[{"end":457,"start":428}],"match_end":457,"match_start":428,"name":"RPN5_C"},{"dbname":"PFAM","description":"PSMD12/CSN4, N-terminal","id":"PF22241","interpro_description":"PSMD12/CSN4-like, N-terminal","interpro_id":"IPR054559","interpro_name":"PSMD12-CSN4-like_N","locations":[{"end":268,"start":52}],"match_end":268,"match_start":52,"name":"PSMD12-CSN4_N"},{"dbname":"PROSITE_PROFILES","description":"PCI domain profile.","id":"PS50250","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":423,"start":251}],"match_end":423,"match_start":251,"name":"PCI"},{"dbname":"SMART","description":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15","id":"SM00088","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":438,"start":352}],"match_end":438,"match_start":352,"name":"PINT"},{"dbname":"FUNFAM","description":"26S proteasome non-ATPase regulatory subunit 12","id":"G3DSA:1.10.10.10:FF:000070","locations":[{"end":427,"start":348}],"match_end":427,"match_start":348},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":428,"start":347}],"match_end":428,"match_start":347,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":427,"start":347}],"match_end":427,"match_start":347},{"dbname":"PANTHER","id":"PTHR10855","interpro_description":"26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4","interpro_id":"IPR040134","interpro_name":"PSMD12/CSN4","locations":[{"end":455,"start":28}],"match_end":455,"match_start":28,"name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4"},{"dbname":"COILS","id":"Coil","locations":[{"end":109,"start":89},{"end":174,"start":154}],"match_end":174,"match_start":89,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":867498,"start_pos":866055,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":133,"start":120}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9557","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9557","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB8E5.02c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4932,"ortholog_uniquename":"YDL147W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4932,"ortholog_uniquename":"YDL147W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03321","ortholog_taxonid":4932,"ortholog_uniquename":"YDL147W","reference_uniquename":"PMID:26896847"}],"product":"19S proteasome regulatory subunit Rpn5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0030163","GO:0005829","GO:0034399","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000502":null,"GO:0005634":null,"GO:0005635":null,"GO:0005737":null,"GO:0005829":null,"GO:0008541":null,"GO:0034399":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03321.1"],"transcripts_by_uniquename":{"SJAG_03321.1":null},"uniprot_identifier":"B6K3X5","uniquename":"SJAG_03321"}


id: SJAG_03322
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85449,88227],"is_not":false,"summary":null,"term":"GO:0033617"},{"annotations":[85450,88228],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[85446,88225],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[85447,88226],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[85448],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[85451,88229],"is_not":false,"summary":null,"term":"GO:0005507"},{"annotations":[85452,88230],"is_not":false,"summary":null,"term":"GO:0051536"},{"annotations":[85453,88231],"is_not":false,"summary":null,"term":"GO:0008168"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3X6","InterPro:IPR007533","EnsemblGenomes-Tr:EEB08183","EnsemblGenomes-Gn:SJAG_03322","GOA:B6K3X6","InterPro:IPR023471","InterPro:IPR015324","InterPro:IPR029063"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ggt2","uniquename":"SJAG_03316"},{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"}],"genes_by_uniquename":{"HGNC:19280":null,"HGNC:2261":null,"SJAG_03322":null,"SPAC1420.04c":null,"SPAC19B12.13":null,"YKL155C":null,"YPL132W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome c oxidase assembly protein CtaG/Cox11","id":"PF04442","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11","interpro_id":"IPR007533","interpro_name":"Cyt_c_oxidase_assmbl_CtaG","locations":[{"end":684,"start":533}],"match_end":684,"match_start":533,"name":"CtaG_Cox11"},{"dbname":"PFAM","description":"Mitochondrial small ribosomal subunit Rsm22","id":"PF09243","interpro_description":"Ribosomal protein Rsm22-like","interpro_id":"IPR015324","interpro_name":"Ribosomal_Rsm22-like","locations":[{"end":468,"start":146}],"match_end":468,"match_start":146,"name":"Rsm22"},{"dbname":"FUNFAM","description":"COX11 cytochrome c oxidase assembly homolog","id":"G3DSA:2.60.370.10:FF:000001","locations":[{"end":695,"start":560}],"match_end":695,"match_start":560},{"dbname":"SUPERFAMILY","id":"SSF110111","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily","interpro_id":"IPR023471","interpro_name":"CtaG/Cox11_dom_sf","locations":[{"end":686,"start":565}],"match_end":686,"match_start":565,"name":"Ctag/Cox11"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":311,"start":158}],"match_end":311,"match_start":158,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:2.60.370.10","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily","interpro_id":"IPR023471","interpro_name":"CtaG/Cox11_dom_sf","locations":[{"end":695,"start":560}],"match_end":695,"match_start":560,"name":"Ctag/Cox11"},{"dbname":"PANTHER","id":"PTHR21320","locations":[{"end":691,"start":493}],"match_end":691,"match_start":493,"name":"CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED"},{"dbname":"HAMAP","description":"Cytochrome c oxidase assembly protein CtaG [ctaG].","id":"MF_00155","interpro_description":"Cytochrome c oxidase assembly protein CtaG/Cox11","interpro_id":"IPR007533","interpro_name":"Cyt_c_oxidase_assmbl_CtaG","locations":[{"end":690,"start":457}],"match_end":690,"match_start":457,"name":"CtaG"}],"location":{"chromosome_name":"supercont5.2","end_pos":869684,"start_pos":867591,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":667,"start":654}}],"name":"cox11","ortholog_annotations":[{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19280","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19280","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2261","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2261","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1420.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.13","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YKL155C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YKL155C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YPL132W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YPL132W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03322","ortholog_taxonid":4932,"ortholog_uniquename":"YPL132W","reference_uniquename":"PMID:26896847"}],"product":"cytochrome c oxidase assembly protein Cox11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0005507","GO:0051536"],"NOT binding":["GO:0008168"]}},"subset_termids":["GO:0016741","GO:0005739","GO:0065003","GO:0140053","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005507":null,"GO:0005739":null,"GO:0005743":null,"GO:0005759":null,"GO:0008168":null,"GO:0032543":null,"GO:0033617":null,"GO:0051536":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03322.1"],"transcripts_by_uniquename":{"SJAG_03322.1":null},"uniprot_identifier":"B6K3X6","uniquename":"SJAG_03322"}


id: SJAG_03323
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88224,97856],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[88221,97853],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88222,97854],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[88223,97855],"is_not":false,"summary":null,"term":"GO:0032797"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03323","InterPro:IPR035426","EnsemblGenomes-Tr:EEB08184","UniProtKB/TrEMBL:B6K3X7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03318"},{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"}],"genes_by_uniquename":{"HGNC:10884":null,"SJAG_03323":null,"SPAC19B12.12c":null,"SPAPB17E12.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Survival motor neuron (SMN) interacting protein 1 (SIP1)","id":"PF04938","interpro_description":"Gemin2/Brr1","interpro_id":"IPR035426","interpro_name":"Gemin2/Brr1","locations":[{"end":208,"start":40}],"match_end":208,"match_start":40,"name":"SIP1"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1070","locations":[{"end":234,"start":84}],"match_end":234,"match_start":84},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":870885,"start_pos":870069,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":42,"start":31}}],"name":"gem2","ortholog_annotations":[{"gene_uniquename":"SJAG_03323","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10884","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03323","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10884","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03323","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.12c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03323","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.02","reference_uniquename":"PMID:21511999"}],"product":"SMN complex subunit Yip1/Gem2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016071","GO:0065003","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0005634":null,"GO:0005829":null,"GO:0032797":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03323.1"],"transcripts_by_uniquename":{"SJAG_03323.1":null},"uniprot_identifier":"B6K3X7","uniquename":"SJAG_03323"}


id: SJAG_03324
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97859],"is_not":false,"summary":null,"term":"GO:0016562"}],"cellular_component":[{"annotations":[97857],"is_not":false,"summary":null,"term":"GO:1990429"},{"annotations":[97858],"is_not":false,"summary":null,"term":"GO:0005778"}],"molecular_function":[{"annotations":[97860],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[97861],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08185","InterPro:IPR001841","GOA:B6K3X8","InterPro:IPR017375","EnsemblGenomes-Gn:SJAG_03324","InterPro:IPR006845","UniProtKB/TrEMBL:B6K3X8","InterPro:IPR013083"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mks1","uniquename":"SJAG_03319"},{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"}],"genes_by_uniquename":{"HGNC:8854":null,"SJAG_03324":null,"SPAPB17E12.03":null,"YMR026C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pex2 / Pex12 amino terminal region","id":"PF04757","interpro_description":"Pex, N-terminal","interpro_id":"IPR006845","interpro_name":"Pex_N","locations":[{"end":239,"start":15}],"match_end":239,"match_start":15,"name":"Pex2_Pex12"},{"dbname":"PFAM","description":"Zinc finger, C3HC4 type (RING finger)","id":"PF00097","interpro_description":"Zinc finger, C3HC4 RING-type","interpro_id":"IPR018957","interpro_name":"Znf_C3HC4_RING-type","locations":[{"end":309,"start":273}],"match_end":309,"match_start":273,"name":"zf-C3HC4"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":311,"start":273}],"match_end":311,"match_start":273,"name":"ZF_RING_2"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":317,"start":266}],"match_end":317,"match_start":266,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":325,"start":259}],"match_end":325,"match_start":259,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR12888","interpro_description":"Peroxisome assembly protein 12","interpro_id":"IPR017375","interpro_name":"PEX12","locations":[{"end":323,"start":3}],"match_end":323,"match_start":3,"name":"PEROXISOME ASSEMBLY PROTEIN 12  PEROXIN-12"}],"location":{"chromosome_name":"supercont5.2","end_pos":872266,"start_pos":871177,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":115,"start":100}}],"name":"pex12","ortholog_annotations":[{"gene_uniquename":"SJAG_03324","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8854","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03324","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03324","ortholog_taxonid":4932,"ortholog_uniquename":"YMR026C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03324","ortholog_taxonid":4932,"ortholog_uniquename":"YMR026C","reference_uniquename":"PMID:26896847"}],"product":"peroxisomal ubiquitin-protein ligase E3 Pex12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0008270"],"NOT binding":["GO:0061630"]}},"subset_termids":["GO:0016746","GO:0140096","GO:0055085","GO:0019787","GO:0005777","GO:0007031"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005778":null,"GO:0008270":null,"GO:0016562":null,"GO:0061630":null,"GO:1990429":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03324.1"],"transcripts_by_uniquename":{"SJAG_03324.1":null},"uniprot_identifier":"B6K3X8","uniquename":"SJAG_03324"}


id: SJAG_03325
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97865],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[97866],"is_not":false,"summary":null,"term":"GO:0000338"}],"cellular_component":[{"annotations":[97862],"is_not":false,"summary":null,"term":"GO:0008180"},{"annotations":[97863],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97864],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[97867],"is_not":false,"summary":null,"term":"GO:0000822"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08186","InterPro:IPR000717","InterPro:IPR036390","InterPro:IPR037750","UniProtKB/TrEMBL:B6K3X9","GOA:B6K3X9","EnsemblGenomes-Gn:SJAG_03325"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cct5","uniquename":"SJAG_03320"},{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"}],"genes_by_uniquename":{"HGNC:30747":null,"SJAG_03325":null,"SPAPB17E12.04c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PCI domain","id":"PF01399","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":410,"start":331}],"match_end":410,"match_start":331,"name":"PCI"},{"dbname":"PROSITE_PROFILES","description":"PCI domain profile.","id":"PS50250","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":417,"start":248}],"match_end":417,"match_start":248,"name":"PCI"},{"dbname":"SMART","description":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15","id":"SM00088","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":432,"start":346}],"match_end":432,"match_start":346,"name":"PINT"},{"dbname":"SMART","description":"PCI/PINT associated module","id":"SM00753","locations":[{"end":344,"start":170}],"match_end":344,"match_start":170,"name":"PAM"},{"dbname":"FUNFAM","description":"COP9 signalosome complex subunit 2","id":"G3DSA:1.25.40.570:FF:000006","locations":[{"end":442,"start":74}],"match_end":442,"match_start":74},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":421,"start":340}],"match_end":421,"match_start":340,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.570","locations":[{"end":442,"start":71}],"match_end":442,"match_start":71},{"dbname":"PANTHER","id":"PTHR10678","interpro_description":"26S Proteasome and COP9 Signalosome Components","interpro_id":"IPR050871","interpro_name":"26S_Proteasome/COP9_Components","locations":[{"end":437,"start":14}],"match_end":437,"match_start":14,"name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2"}],"location":{"chromosome_name":"supercont5.2","end_pos":873795,"start_pos":872271,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":26,"start":2}}],"name":"csn2","ortholog_annotations":[{"gene_uniquename":"SJAG_03325","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30747","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03325","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.04c","reference_uniquename":"PMID:21511999"}],"product":"COP9/signalosome complex subunit Csn2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0000822"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0070647"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000338":null,"GO:0000822":null,"GO:0005634":null,"GO:0005829":null,"GO:0006974":null,"GO:0008180":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03325.1"],"transcripts_by_uniquename":{"SJAG_03325.1":null},"uniprot_identifier":"B6K3X9","uniquename":"SJAG_03325"}


id: SJAG_03326
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97872,110536],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[97868,110530],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97870,110532],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[110534],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[97874,110538],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[97876,110540],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[97878,110542],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR018267","InterPro:IPR011332","EnsemblGenomes-Tr:EEB08187","EnsemblGenomes-Gn:SJAG_03326","GOA:B6K3Y0","InterPro:IPR001569","InterPro:IPR011331","UniProtKB/TrEMBL:B6K3Y0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":87,"start":50}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03321"},{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"}],"genes_by_uniquename":{"HGNC:10347":null,"SJAG_03326":null,"SPAPB17E12.05":null,"SPCC1223.05c":null,"YDR500C":null,"YLR185W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L37e","id":"PF01907","interpro_description":"Large ribosomal subunit protein eL37","interpro_id":"IPR001569","interpro_name":"Ribosomal_eL37","locations":[{"end":54,"start":2}],"match_end":54,"match_start":2,"name":"Ribosomal_L37e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L37e signature.","id":"PS01077","interpro_description":"Large ribosomal subunit protein eL37, conserved site","interpro_id":"IPR018267","interpro_name":"Ribosomal_eL37_CS","locations":[{"end":23,"start":4}],"match_end":23,"match_start":4,"name":"RIBOSOMAL_L37E"},{"dbname":"FUNFAM","description":"Ribosomal protein L37","id":"G3DSA:2.20.25.30:FF:000001","locations":[{"end":87,"start":1}],"match_end":87,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF57829","interpro_description":"Zinc-binding ribosomal protein","interpro_id":"IPR011332","interpro_name":"Ribosomal_zn-bd","locations":[{"end":55,"start":1}],"match_end":55,"match_start":1,"name":"Zn-binding ribosomal proteins"},{"dbname":"GENE3D","id":"G3DSA:2.20.25.30","interpro_description":"Large ribosomal subunit protein eL37/eL43","interpro_id":"IPR011331","interpro_name":"Ribosomal_eL37/eL43","locations":[{"end":87,"start":1}],"match_end":87,"match_start":1},{"dbname":"PANTHER","id":"PTHR10768","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L37"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein eL37 [rpl37e].","id":"MF_00547","interpro_description":"Large ribosomal subunit protein eL37","interpro_id":"IPR001569","interpro_name":"Ribosomal_eL37","locations":[{"end":53,"start":2}],"match_end":53,"match_start":2,"name":"Ribosomal_L37e"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":87,"start":50}],"match_end":87,"match_start":50,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":66,"start":52}],"match_end":66,"match_start":52,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":874933,"start_pos":874611,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":53}}],"name":"rpl37a","ortholog_annotations":[{"gene_uniquename":"SJAG_03326","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10347","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10347","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1223.05c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YDR500C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YDR500C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YLR185W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03326","ortholog_taxonid":4932,"ortholog_uniquename":"YLR185W","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L37","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"Binding":["GO:0019843","GO:0008270"],"NOT binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0002181","GO:0022626","GO:0005829","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005829":null,"GO:0008270":null,"GO:0019843":null,"GO:0022625":null,"GO:0030684":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03326.1"],"transcripts_by_uniquename":{"SJAG_03326.1":null},"uniprot_identifier":"B6K3Y0","uniquename":"SJAG_03326"}


id: SJAG_03327
data:
  {"coiled_coil_coords":[{"range":{"end":108,"start":81}},{"range":{"end":150,"start":130}},{"range":{"end":227,"start":158}}],"cv_annotations":{"biological_process":[{"annotations":[97883],"is_not":false,"summary":null,"term":"GO:0051315"},{"annotations":[97884],"is_not":false,"summary":null,"term":"GO:0031619"},{"annotations":[97885],"is_not":false,"summary":null,"term":"GO:0000070"},{"annotations":[97886],"is_not":false,"summary":null,"term":"GO:0034501"},{"annotations":[97887],"is_not":false,"summary":null,"term":"GO:1905325"},{"annotations":[97888],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[97880],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[97881],"is_not":false,"summary":null,"term":"GO:0180019"},{"annotations":[97882],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["GOA:B6K3Y1","InterPro:IPR037475","EnsemblGenomes-Gn:SJAG_03327","EnsemblGenomes-Tr:EEB08188","UniProtKB/TrEMBL:B6K3Y1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox11","uniquename":"SJAG_03322"},{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"}],"genes_by_uniquename":{"HGNC:13195":null,"SJAG_03327":null,"SPAPB17E12.06":null,"YDR532C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Kinetochore protein Sos7","id":"PF20882","interpro_description":"Kinetochore protein Sos7, coiled-coil domain","interpro_id":"IPR048781","interpro_name":"Sos7_CC","locations":[{"end":120,"start":46}],"match_end":120,"match_start":46,"name":"Sos7"},{"dbname":"PANTHER","id":"PTHR37329","interpro_description":"Kinetochore protein Sos7","interpro_id":"IPR037475","interpro_name":"Sos7","locations":[{"end":249,"start":10}],"match_end":249,"match_start":10,"name":"KINETOCHORE PROTEIN SOS7"},{"dbname":"COILS","id":"Coil","locations":[{"end":108,"start":81},{"end":150,"start":130},{"end":227,"start":158}],"match_end":227,"match_start":81,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":876246,"start_pos":875178,"strand":"forward"},"name":"sos7","ortholog_annotations":[{"gene_uniquename":"SJAG_03327","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13195","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03327","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03327","ortholog_taxonid":4932,"ortholog_uniquename":"YDR532C","reference_uniquename":"PMID:29761456"}],"product":"outer kinetochore KNL network protein Sos7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0000776","GO:0005634","GO:0140013","GO:0005694","GO:0000070","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000070":null,"GO:0000776":null,"GO:0005634":null,"GO:0031619":null,"GO:0034501":null,"GO:0051315":null,"GO:0051455":null,"GO:0180019":null,"GO:1905325":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03327.1"],"transcripts_by_uniquename":{"SJAG_03327.1":null},"uniprot_identifier":"B6K3Y1","uniquename":"SJAG_03327"}


id: SJAG_03328
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97891],"is_not":false,"summary":null,"term":"GO:0000379"}],"cellular_component":[{"annotations":[97889],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[97890],"is_not":false,"summary":null,"term":"GO:0000214"}],"molecular_function":[{"annotations":[67506],"is_not":false,"summary":null,"term":"GO:0016829"},{"annotations":[97892],"is_not":false,"summary":null,"term":"GO:0000213"}]},"dbxrefs":["InterPro:IPR016589","InterPro:IPR011856","InterPro:IPR006676","EnsemblGenomes-Tr:EEB08189","EnsemblGenomes-Gn:SJAG_03328","UniProtKB/TrEMBL:B6K3Y2","InterPro:IPR036167","InterPro:IPR006677","GOA:B6K3Y2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gem2","uniquename":"SJAG_03323"},{"name":"pex12","uniquename":"SJAG_03324"},{"name":"csn2","uniquename":"SJAG_03325"},{"name":"rpl37a","uniquename":"SJAG_03326"},{"name":"sos7","uniquename":"SJAG_03327"},{"name":"sen2","uniquename":"SJAG_03328"},{"name":"eos1","uniquename":"SJAG_03330"},{"uniquename":"SJAG_03331"},{"name":"mrm202","uniquename":"SJAG_03332"},{"name":"ost3","uniquename":"SJAG_03333"},{"name":"mrx21","uniquename":"SJAG_03334"}],"genes_by_uniquename":{"HGNC:28422":null,"SJAG_03328":null,"SPAPB17E12.07c":null,"YLR105C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA intron endonuclease, catalytic C-terminal domain","id":"PF01974","interpro_description":"tRNA intron endonuclease, catalytic domain-like","interpro_id":"IPR006677","interpro_name":"tRNA_intron_Endonuc_cat-like","locations":[{"end":291,"start":209}],"match_end":291,"match_start":209,"name":"tRNA_int_endo"},{"dbname":"CDD","description":"tRNA-intron_lyase_C","id":"cd22363","interpro_description":"tRNA intron endonuclease, catalytic domain-like","interpro_id":"IPR006677","interpro_name":"tRNA_intron_Endonuc_cat-like","locations":[{"end":290,"start":208}],"match_end":290,"match_start":208,"name":"tRNA-intron_lyase_C"},{"dbname":"SUPERFAMILY","id":"SSF53032","interpro_description":"tRNA intron endonuclease, catalytic domain-like superfamily","interpro_id":"IPR036167","interpro_name":"tRNA_intron_Endo_cat-like_sf","locations":[{"end":295,"start":208}],"match_end":295,"match_start":208,"name":"tRNA-intron endonuclease catalytic domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1350.10","interpro_description":"tRNA endonuclease-like domain superfamily","interpro_id":"IPR011856","interpro_name":"tRNA_endonuc-like_dom_sf","locations":[{"end":305,"start":208}],"match_end":305,"match_start":208},{"dbname":"PANTHER","id":"PTHR21227","interpro_description":"tRNA-splicing endonuclease","interpro_id":"IPR006676","interpro_name":"tRNA_splic","locations":[{"end":338,"start":6}],"match_end":338,"match_start":6,"name":"TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2"},{"dbname":"PIRSF","id":"PIRSF011789","interpro_description":"tRNA-splicing endonuclease, SEN2 subunit","interpro_id":"IPR016589","interpro_name":"tRNA_splic_SEN2","locations":[{"end":338,"start":1}],"match_end":338,"match_start":1,"name":"tRNA_endo_SEN2"}],"location":{"chromosome_name":"supercont5.2","end_pos":877525,"start_pos":876341,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":24,"start":10}}],"name":"sen2","ortholog_annotations":[{"gene_uniquename":"SJAG_03328","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28422","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03328","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPB17E12.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03328","ortholog_taxonid":4932,"ortholog_uniquename":"YLR105C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03328","ortholog_taxonid":4932,"ortholog_uniquename":"YLR105C","reference_uniquename":"PMID:26896847"}],"product":"tRNA-splicing endonuclease catalytic subunit Sen2","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"NOT binding":["GO:0016829","GO:0000213"]}},"subset_termids":["GO:0005634","GO:0006399","GO:0140101","GO:0016788","GO:0016829","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000213":null,"GO:0000214":null,"GO:0000379":null,"GO:0005737":null,"GO:0016829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03328.1"],"transcripts_by_uniquename":{"SJAG_03328.1":null},"uniprot_identifier":"B6K3Y2","uniquename":"SJAG_03328"}


