# terms

id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: PBO:0004891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor, nucleoporin Rae1","termid":"PBO:0004891"}


id: GO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An NADPH regeneration process that contributes to the light reactions of photosynthesis. The light reactions of photosynthesis use energy from photons to generate high-energy electrons. These electrons are used directly to reduce NADP+ to NADPH. NADPH is a relatively stable molecule and can pass on its hydrogen atom to other molecules in chemical reactions.","definition_xrefs":["GOC:jid","ISBN:0816017360","ISBN:0716746840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"photosynthetic NADP+ reduction","termid":"GO:0009780"}


id: PBO:0079003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 3-1","termid":"PBO:0079003"}


id: GO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response resulting from wounding.","definition_xrefs":["GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to wounding","synonyms":[{"name":"behavioural response to wounding","type":"exact"}],"termid":"GO:0002210"}


id: PBO:0085645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor","termid":"PBO:0085645"}


id: GO:0032546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleoside binding","termid":"GO:0032546"}


id: PBO:0083562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene VID21/YDR359C","termid":"PBO:0083562"}


id: GO:0051794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of catagen","synonyms":[{"name":"regulation of catagen","type":"related"}],"termid":"GO:0051794"}


id: GO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"is_a","term_name":"negative regulation of muscle tissue development","termid":"GO:1901862"},{"relation_name":"negatively_regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle tissue development","synonyms":[{"name":"down regulation of striated muscle development","type":"exact"},{"name":"down-regulation of striated muscle development","type":"exact"},{"name":"downregulation of striated muscle development","type":"exact"},{"name":"inhibition of striated muscle development","type":"narrow"}],"termid":"GO:0045843"}


id: GO:1901202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix assembly","termid":"GO:1901201"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of extracellular matrix assembly","synonyms":[{"name":"down regulation of extracellular matrix assembly","type":"exact"},{"name":"down-regulation of extracellular matrix assembly","type":"exact"},{"name":"downregulation of extracellular matrix assembly","type":"exact"},{"name":"inhibition of extracellular matrix assembly","type":"narrow"}],"termid":"GO:1901202"}


id: GO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + H+ = CO2 + dopamine.","definition_xrefs":["GOC:PARL","RHEA:12272","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-L-amino-acid decarboxylase activity","termid":"GO:0004058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"L-dopa decarboxylase activity","synonyms":[{"name":"4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"DDC activity","type":"exact"},{"name":"DOPA decarboxylase activity","type":"related"}],"termid":"GO:0036468"}


id: SO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome deficiency aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_deficiency","synonyms":[{"name":"assortment-derived deficiency","type":"exact"}],"termid":"SO:0000802"}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: GO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + L-homocysteine = cystathionine + H2O.","definition_xrefs":["EC:4.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cystathionine beta-synthase activity","secondary_identifiers":["Reactome:R-HSA-1614524","RHEA:10112","MetaCyc:CYSTATHIONINE-BETA-SYNTHASE-RXN"],"synonyms":[{"name":"L-serine hydro-lyase (adding homocysteine)","type":"related"},{"name":"L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"related"},{"name":"beta-thionase activity","type":"related"},{"name":"methylcysteine synthase activity","type":"related"},{"name":"serine sulfhydrase activity","type":"related"},{"name":"serine sulfhydrylase activity","type":"related"}],"termid":"GO:0004122"}


id: PBO:0005605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c (predicted)","termid":"PBO:0005605"}


id: FYPO:0000985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter occurs only at a higher level of pheromone than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional response to pheromone at increased pheromone level (obsolete FYPO:0000985)","synonyms":[{"name":"decreased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"decreased transcriptional response to pheromone","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter by pheromones at increased pheromone level","type":"exact"},{"name":"resistant to pheromone","type":"related"}],"termid":"FYPO:0000985"}


id: GO:0015560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (L-idonate or D-gluconate)(out) + H+(out) = (L-iodonate or D-gluconate)(in) + H+(in).","definition_xrefs":["TC:2.A.8.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate/D-gluconate:hydrogen symporter activity (obsolete GO:0015560)","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"exact"},{"name":"L-idonate/D-gluconate:proton symporter","type":"exact"}],"termid":"GO:0015560"}


id: PBO:0088878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp3","termid":"PBO:0088878"}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["MetaCyc:PWY-5188","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0033013"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: GO:1903515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from cytosol to endoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000078","PMID:16402920","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium ion transport from cytosol to endoplasmic reticulum","termid":"GO:1903515"}


id: PBO:0062420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 62 pseudogene","termid":"PBO:0062420"}


id: GO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"positively_regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"}


id: PR:O74468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A siroheme synthase cysG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III C-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.06c","secondary_identifiers":["UniProtKB:O74468"],"synonyms":[{"name":"Spom972h-cysG","type":"exact"}],"termid":"PR:O74468"}


id: PBO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.41","termid":"PBO:0004493"}


id: PBO:0072316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 2","termid":"PBO:0072316"}


id: FYPO:0005946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell cycle-regulated mRNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell cycle-regulated mRNAs are transcribed from genes whose level of transcription varies depending on cell cycle phase.","definition_xrefs":["PMID:15195092","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of cell cycle regulated gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell cycle regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell cycle regulated gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell cycle regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell cycle regulated gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cell cycle-regulated gene mRNA during vegetative growth","type":"exact"},{"name":"reduced level of cell cycle regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005946"}


id: PBO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.52","termid":"PBO:0002883"}


id: GO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29571981","PMID:11805081","PMID:18037263","PMID:19801898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"symbiont-mediated activation of host programmed cell death","termid":"GO:0052042"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host apoptosis","secondary_identifiers":["GO:0039651","GO:0052030","GO:0033669","GO:0060139"],"synonyms":[{"name":"activation by organism of host apoptosis","type":"exact"},{"name":"activation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"activation by symbiont of host apoptosis","type":"narrow"},{"name":"induction by organism of host apoptotic programmed cell death","type":"exact"},{"name":"induction by symbiont of host apoptosis","type":"exact"},{"name":"positive regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"positive regulation by symbiont of host apoptosis","type":"narrow"},{"name":"positive regulation by symbiont of host apoptotic process","type":"exact"},{"name":"positive regulation by virus of host apoptosis","type":"narrow"},{"name":"stimulation by symbiont of host apoptosis","type":"narrow"},{"name":"up regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up regulation by symbiont of host apoptosis","type":"exact"},{"name":"up-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host apoptosis","type":"exact"},{"name":"upregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host apoptosis","type":"exact"}],"termid":"GO:0052151"}


id: FYPO:0009088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of magnesium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of magnesium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to magnesium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to magnesium chloride and SDS","type":"exact"},{"name":"hypersensitive to magnesium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to magnesium chloride and SDS","type":"exact"},{"name":"sensitive to magnesium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to magnesium chloride and SDS in combination","type":"exact"},{"name":"sensitive to magnesium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to magnesium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009088"}


id: GO:0004035
data:
  {"annotated_genes":["SJAG_03108","SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99981,100165],"is_not":false,"summary":null,"term":"GO:0004035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphate monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["EC:3.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02853":null,"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"alkaline phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8878787","MetaCyc:ALKAPHOSPHA-RXN"],"synonyms":[{"name":"alkaline phenyl phosphatase activity","type":"related"},{"name":"alkaline phosphohydrolase activity","type":"related"},{"name":"alkaline phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004035","terms_by_termid":{"GO:0004035":null}}


id: PATO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark purple","termid":"PATO:0001259"}


id: GO:1990651
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104822],"is_not":false,"summary":null,"term":"GO:1990651"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + H2O = 1D-myo-inositol 1,2,4,6-tetrakisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate phosphatase activity","termid":"GO:0052827"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol-1,2,4,5,6-pentakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990651","terms_by_termid":{"GO:1990651":null}}


id: GO:1904073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:24508636","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophectodermal cell proliferation","synonyms":[{"name":"regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904073"}


id: PBO:0040633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 2","termid":"PBO:0040633"}


id: FYPO:0001294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal actin cortical patch localization","synonyms":[{"name":"normal F-actin patch localization","type":"exact"},{"name":"normal actin cortical patch localisation","type":"exact"},{"name":"normal actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch localization during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location","type":"related"},{"name":"normal actin patch localization","type":"exact"}],"termid":"FYPO:0001294"}


id: PBO:0029047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_organization_during_nitrogen_starvation","termid":"PBO:0029047"}


id: GO:1901252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of egress of virus within host cell.","definition_xrefs":["GOC:bf","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular transport of viral material","synonyms":[{"name":"regulation of egress of virus within host cell","type":"related"},{"name":"regulation of movement of virus within host cell","type":"exact"},{"name":"regulation of viral egress","type":"exact"}],"termid":"GO:1901252"}


id: PBO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FN1 divergent transcript","termid":"PBO:0047727"}


id: PBO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one ot one)","termid":"PBO:0001788"}


id: PBO:0059693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 1","termid":"PBO:0059693"}


id: GO:0060047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart contraction","synonyms":[{"name":"cardiac contraction","type":"related"},{"name":"heart beating","type":"exact"},{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0060047"}


id: GO:0106247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["PMID:29932902","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of poly(A)-specific ribonuclease activity (obsolete GO:0106247)","termid":"GO:0106247"}


id: PBO:0113064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay; role in preventing L-A mycovirus pathogenesis; protein abundance increases in response to DNA replication stress; human homolog, parafibromin, is a tumour suppressor linked to breast, renal and gastric cancers","termid":"PBO:0113064"}


id: PR:Q9P779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin C1711.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.11","synonyms":[{"name":"Spom972h-SPBC1711.11","type":"exact"}],"termid":"PR:Q9P779"}


id: PBO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP14 microtubule-associated protein Dis1","termid":"PBO:0018118"}


id: PBO:0040197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 10","termid":"PBO:0040197"}


id: GO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 9 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K9 acetylation (obsolete GO:0043978)","synonyms":[{"name":"histone H2A acetylation at K9","type":"exact"}],"termid":"GO:0043978"}


id: PBO:0066888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 188","termid":"PBO:0066888"}


id: GO:0034992
data:
  {"annotated_genes":["SJAG_05196","SJAG_05207","SJAG_03783","SJAG_01242","SJAG_01538","SJAG_03491","SJAG_05303","SJAG_04558","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114666],"is_not":false,"summary":null,"term":"GO:0034992"},{"annotations":[99355,109352,93283],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034993"},{"annotations":[84545,97441,111219,94522,100272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180028"},{"annotations":[93286,99363],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches; protein complexes embedded in the nuclear envelope mediate direct or indirect linkages between the microtubule cytoskeleton and the nuclear envelope.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01538":null,"SJAG_03491":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_04558":null,"SJAG_05196":null,"SJAG_05207":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"microtubule organizing center attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAS","type":"exact"},{"name":"MTOC attachment site","type":"exact"},{"name":"microtubule organising centre attachment site","type":"exact"}],"termid":"GO:0034992","terms_by_termid":{"GO:0034992":null,"GO:0034993":null,"GO:0180028":null,"GO:1990612":null}}


id: PBO:0089266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1","termid":"PBO:0089266"}


id: GO:0102408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + sn-2-C16:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102408)","termid":"GO:0102408"}


id: PBO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L23 (predicted)","termid":"PBO:0000333"}


id: GO:0102342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA + NADP = 3-oxohexacosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA reductase activity (obsolete GO:0102342)","termid":"GO:0102342"}


id: GO:0140703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',3' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 3',5' linkages.","definition_xrefs":["PMID:30787435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cyclic GMP-AMP binding","termid":"GO:0140702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3',3'-cyclic GMP-AMP binding","synonyms":[{"name":"3',3' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',3'-cGAMP binding","type":"exact"},{"name":"3',3'-cGMP-AMP binding","type":"exact"},{"name":"3',3'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140703"}


id: PBO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 2","termid":"PBO:0051617"}


id: GO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + O2 = cholest-5-en-3-one + H2O2.","definition_xrefs":["RHEA:32183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol oxidase activity","secondary_identifiers":["EC:1.1.3.6","KEGG_REACTION:R01459","MetaCyc:CHOLESTEROL-OXIDASE-RXN"],"synonyms":[{"name":"3beta-hydroxy steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid:oxygen oxidoreductase activity","type":"related"},{"name":"cholesterol- O2 oxidoreductase activity","type":"related"},{"name":"cholesterol-O2 oxidoreductase activity","type":"related"},{"name":"cholesterol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016995"}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:txnOH","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: PBO:0068198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 505","termid":"PBO:0068198"}


id: PBO:0053046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4B divergent transcript","termid":"PBO:0053046"}


id: PBO:0082092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase; inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate; has negligible fructose-2,6-bisphosphatase activity; transcriptional regulation involves protein kinase A","termid":"PBO:0082092"}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: PBO:0078687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-3","termid":"PBO:0078687"}


id: PBO:0052508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 22","termid":"PBO:0052508"}


id: GO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + ATP + H2O = D-phenylalanine + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:5.1.1.11","RHEA:20201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylalanine racemase (ATP-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R00686","MetaCyc:5.1.1.11-RXN"],"synonyms":[{"name":"gramicidin S synthetase I","type":"related"},{"name":"phenylalanine racemase (ATP-hydrolysing)","type":"broad"},{"name":"phenylalanine racemase (adenosine triphosphate-hydrolysing)","type":"related"},{"name":"phenylalanine racemase activity","type":"related"}],"termid":"GO:0047462"}


id: PBO:0056074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6D","termid":"PBO:0056074"}


id: PBO:0079796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3 pseudogene 7","termid":"PBO:0079796"}


id: PBO:0028145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028145"}


id: GO:0042410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + pimelate = AMP + diphosphate + H+ + pimelyl-CoA.","definition_xrefs":["EC:6.2.1.14","RHEA:14781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-carboxyhexanoate-CoA ligase activity","secondary_identifiers":["MetaCyc:6-CARBOXYHEXANOATE--COA-LIGASE-RXN","KEGG_REACTION:R03209"],"synonyms":[{"name":"6-carboxyhexanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"6-carboxyhexanoyl-CoA synthetase activity","type":"related"},{"name":"pimeloyl-CoA synthetase activity","type":"related"},{"name":"pimelyl-CoA synthetase activity","type":"related"}],"termid":"GO:0042410"}


id: GO:0065010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular membrane-bounded organelle","synonyms":[{"name":"extracellular membrane-enclosed organelle","type":"exact"}],"termid":"GO:0065010"}


id: PR:P87051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11071:SF41","OMA:SCHPO00551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase ppi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.03","secondary_identifiers":["UniProtKB:P87051"],"synonyms":[{"name":"PPIase ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL1","type":"exact"},{"name":"cyclophilin ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase ppi1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87051"}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: PBO:0075887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2","termid":"PBO:0075887"}


id: PBO:0046893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 13 member C","termid":"PBO:0046893"}


id: PBO:0074274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen like 1","termid":"PBO:0074274"}


id: PBO:0076903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 101","termid":"PBO:0076903"}


id: GO:0051383
data:
  {"annotated_genes":["SJAG_03217","SJAG_02465","SJAG_00794","SJAG_05321","SJAG_03220","SJAG_03048","SJAG_01837","SJAG_00718","SJAG_02664","SJAG_04638","SJAG_02513","SJAG_01374","SJAG_04177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87529,91880],"is_not":false,"summary":null,"term":"GO:0051383"},{"annotations":[102075,87364,110062,102004,108703,113951,106840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051382"},{"annotations":[114450],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[98926,86236,113186],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00794":null,"SJAG_01374":null,"SJAG_01837":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_04177":null,"SJAG_04638":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"kinetochore organisation","type":"exact"},{"name":"kinetochore organization and biogenesis","type":"related"}],"termid":"GO:0051383","terms_by_termid":{"GO:0051382":null,"GO:0051383":null,"GO:1905560":null,"GO:1905561":null}}


id: SO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of a transcript that regulates splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_regulatory_region","termid":"SO:0001056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_enhancer","synonyms":[{"name":"splice enhancer","type":"exact"}],"termid":"SO:0000344"}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["Wikipedia:Cofactor_F430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: GO:0071629
data:
  {"annotated_genes":["SJAG_02419","SJAG_00552","SJAG_01556","SJAG_02341","SJAG_00173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104532,106168,106271,106858,110132],"is_not":false,"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["GOC:rb","PMID:20080635","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"is_a","term_name":"cytoplasm protein quality control","termid":"GO:0140455"},{"relation_name":"part_of","term_name":"cellular response to misfolded protein","termid":"GO:0071218"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"cytoplasm protein quality control by the ubiquitin-proteasome system","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome","type":"exact"}],"termid":"GO:0071629","terms_by_termid":{"GO:0071629":null}}


id: GO:1902876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["PMID:16872597","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of embryonic pattern specification","termid":"GO:1902875"},{"relation_name":"negatively_regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic pattern specification","synonyms":[{"name":"down regulation of embryonic pattern specification","type":"exact"},{"name":"down regulation of ventral/lateral system","type":"related"},{"name":"down-regulation of embryonic pattern specification","type":"exact"},{"name":"down-regulation of ventral/lateral system","type":"related"},{"name":"downregulation of embryonic pattern specification","type":"exact"},{"name":"downregulation of ventral/lateral system","type":"related"},{"name":"inhibition of embryonic pattern specification","type":"narrow"},{"name":"inhibition of ventral/lateral system","type":"related"},{"name":"negative regulation of ventral/lateral system","type":"related"}],"termid":"GO:1902876"}


id: PBO:0041415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 50","termid":"PBO:0041415"}


id: PBO:0081418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 274","termid":"PBO:0081418"}


id: PBO:0047573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 1","termid":"PBO:0047573"}


id: GO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a fully developed and mature organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult locomotory behavior","synonyms":[{"name":"adult locomotory behaviour","type":"exact"}],"termid":"GO:0008344"}


id: PBO:0069406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 666, pseudogene","termid":"PBO:0069406"}


id: PBO:0074205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A13 antisense RNA 1","termid":"PBO:0074205"}


id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: PBO:0110396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member A6","termid":"PBO:0110396"}


id: PBO:0039057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 6","termid":"PBO:0039057"}


id: PBO:0075745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72","termid":"PBO:0075745"}


id: FYPO:0003070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a single-stranded DNA 5'-3' exodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"}


id: PBO:0040441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B2","termid":"PBO:0040441"}


id: GO:0010840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the wakeful phase of the circadian sleep/wake cycle. The wakeful phase is the part of the circadian sleep/wake cycle where the organism is not asleep.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle","termid":"GO:0042749"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"}


id: PBO:0009180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist","termid":"PBO:0009180"}


id: GO:0032832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032829"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0032832"}


id: GO:0160012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone] + nicotinamide.","definition_xrefs":["PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone decrotonylase activity","termid":"GO:0160009"},{"relation_name":"is_a","term_name":"NAD-dependent protein decrotonylase activity","termid":"GO:0160011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0016740","GO:0003674","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}


id: GO:0090225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the number of microtubules in a given region of the spindle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of spindle density (obsolete GO:0090225)","termid":"GO:0090225"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: PBO:0011146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase (predicted)","termid":"PBO:0011146"}


id: PBO:0056520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mbt domain containing 1","termid":"PBO:0056520"}


id: PBO:0004556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere-specific histone H3 CENP-A","termid":"PBO:0004556"}


id: GO:0046810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the extracellular matrix of a host cell.","definition_xrefs":["PMID:7996163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"host cell extracellular matrix binding","termid":"GO:0046810"}


id: PATO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the relative change in the bearer's length or the bearer's volume when being stretched or squashed.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strain","termid":"PATO:0001034"}


id: PBO:0072923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 4","termid":"PBO:0072923"}


id: GO:0043885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + oxidized ferredoxin = CO2 + reduced ferredoxin.","definition_xrefs":["RHEA:21040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anaerobic carbon-monoxide dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0652","EC:1.2.7.4","MetaCyc:1.2.7.4-RXN"],"synonyms":[{"name":"CO dehydrogenase activity","type":"exact"},{"name":"CO-dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"CO-dehydrogenase activity","type":"exact"},{"name":"CODH","type":"related"},{"name":"carbon monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon-monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide,water:ferredoxin oxidoreductase activity","type":"exact"},{"name":"carbon-monoxide:(acceptor) oxidoreductase activity","type":"exact"}],"termid":"GO:0043885"}


id: PBO:0070414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA interacting protein","termid":"PBO:0070414"}


id: PBO:0039807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 3","termid":"PBO:0039807"}


id: PBO:0086123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for fermentation at low temperature; plays a role in the maturation of secretory proteins; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086123"}


id: PBO:0073953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 2","termid":"PBO:0073953"}


id: PBO:0076155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1 homolog, MIS12 kinetochore complex assembly cochaperone","termid":"PBO:0076155"}


id: PBO:0041721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyon neuron specific vesicular protein","termid":"PBO:0041721"}


id: PBO:0046993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member D","termid":"PBO:0046993"}


id: GO:0039524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts mRNA processing in its host. mRNA processing is the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","VZ:903","GOC:bf","PMID:16571812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA processing","synonyms":[{"name":"inhibition by virus of host mRNA processing","type":"narrow"},{"name":"inhibition of host mRNA processing","type":"exact"},{"name":"inhibition of host pre-mRNA processing by virus","type":"narrow"},{"name":"negative regulation of host mRNA processing","type":"broad"},{"name":"suppression by virus of host mRNA processing","type":"narrow"}],"termid":"GO:0039524"}


id: PBO:0064664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4G","termid":"PBO:0064664"}


id: GO:0033850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-cis,6-trans-farnesyl diphosphate + diphosphate.","definition_xrefs":["EC:2.5.1.68","RHEA:23300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Z-farnesyl diphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R08528","MetaCyc:2.5.1.68-RXN"],"synonyms":[{"name":"(Z)-farnesyl diphosphate synthase activity","type":"related"},{"name":"geranyl-diphosphate:isopentenyl-diphosphate geranylcistransferase activity","type":"related"}],"termid":"GO:0033850"}


id: GO:0098873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Propagation of an action potential in a neuron, from its site of initiation (typically the axon hillock) towards the soma.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential back-propagation","termid":"GO:0098873"}


id: PBO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein (predicted)","termid":"PBO:0001488"}


id: PBO:0041082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"break repair meiotic recombinase recruitment factor 1","termid":"PBO:0041082"}


id: PBO:0068300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 6","termid":"PBO:0068300"}


id: PR:O94259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.10c","synonyms":[{"name":"Spom972h-utp16","type":"exact"},{"name":"U3 snoRNA-associated protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94259"}


id: PR:O14076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.11c","synonyms":[{"name":"Spom972h-mpp6","type":"exact"}],"termid":"PR:O14076"}


id: FYPO:0001616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular valine level","synonyms":[{"name":"decreased cellular L-valine level","type":"exact"},{"name":"decreased cellular valine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular valine level during vegetative growth","type":"exact"},{"name":"decreased level of valine in cell","type":"exact"},{"name":"reduced cellular valine level","type":"exact"},{"name":"reduced level of valine in cell","type":"exact"}],"termid":"FYPO:0001616"}


id: SO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Ngaro retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in Ngaro are arranged in A-pol-B-A-B order where A and B represent ITRs.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ngaro_YR_retrotransposon","synonyms":[{"name":"Ngaro YR retrotransposon","type":"exact"},{"name":"Ngaro retrotransposon","type":"exact"},{"name":"RYN retrotransposon","type":"exact"}],"termid":"SO:0002288"}


id: PBO:0076921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B2, mitochondrial","termid":"PBO:0076921"}


id: GO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-arginine on the carbon 5 (C5) residue to form peptidyl-5-methyl-L-arginine.","definition_xrefs":["GOC:bf","RESID:AA0272"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine C5-methylation (obsolete GO:0018181)","synonyms":[{"name":"peptidyl-arginine 5-methylation","type":"exact"}],"termid":"GO:0018181"}


id: PBO:0056936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-1","termid":"PBO:0056936"}


id: PBO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized low density lipoprotein receptor 1","termid":"PBO:0061864"}


id: PBO:0065384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 11","termid":"PBO:0065384"}


id: FYPO:0004913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nalidixic acid. Cells stop growing (and may die) at a concentration of nalidixic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to nalidixic acid","synonyms":[{"name":"hypersensitive to nalidixic acid","type":"exact"},{"name":"sensitive to nalidixic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to nalidixic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0004913"}


id: PBO:0082759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; essential protein required for splicing and for assembly of SF3b","termid":"PBO:0082759"}


id: PBO:0027555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis_II","termid":"PBO:0027555"}


id: PBO:0034329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_prototype","termid":"PBO:0034329"}


id: GO:0044142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's increase in size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont on or near host surface (obsolete GO:0044142)","termid":"GO:0044142"}


id: PBO:0075860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 8, pseudogene","termid":"PBO:0075860"}


id: PBO:0029333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation","termid":"PBO:0029333"}


id: PBO:0082257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-tubulin folding protein; similar to mammalian cofactor B; Alf1p-GFP localizes to cytoplasmic microtubules; required for the folding of alpha-tubulin and may play an additional role in microtubule maintenance","termid":"PBO:0082257"}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: PBO:0050058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Y (pseudogene)","termid":"PBO:0050058"}


id: PBO:0056212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6B","termid":"PBO:0056212"}


id: MOD:00540
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 9x(13)C labeled residue.","definition_xrefs":["PubMed:12716131","Unimod:184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled residue","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:00540"}


id: PBO:0049121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein 1","termid":"PBO:0049121"}


id: _global:interaction_genotype_b
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_b","termid":"_global:interaction_genotype_b"}


id: GO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH.","definition_xrefs":["EC:1.3.1.68","RHEA:15657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05314","MetaCyc:1.3.1.68-RXN","UM-BBD_reactionID:r0224"],"synonyms":[{"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018521"}


id: GO:0006022
data:
  {"annotated_genes":["SJAG_02845","SJAG_00442","SJAG_01453","SJAG_00978","SJAG_04868","SJAG_04728","SJAG_03723","SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99331,106578,84783,85121,85294,101196,70424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_01453":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan metabolism","type":"exact"}],"termid":"GO:0006022","terms_by_termid":{"GO:0006031":null,"GO:0006032":null}}


id: GO:0005606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-1 complex","synonyms":[{"name":"laminin-111 complex","type":"exact"}],"termid":"GO:0005606"}


id: PBO:0069109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 358, pseudogene","termid":"PBO:0069109"}


id: GO:0004735
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98334],"is_not":false,"summary":null,"term":"GO:0004735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+.","definition_xrefs":["EC:1.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14109","MetaCyc:PYRROLINECARBREDUCT-RXN","Reactome:R-HSA-6783939","Reactome:R-HSA-6783955","Reactome:R-HSA-70664"],"synonyms":[{"name":"1-pyrroline-5-carboxylate reductase activity","type":"related"},{"name":"L-proline oxidase activity","type":"related"},{"name":"L-proline-NAD(P)+ 5-oxidoreductase activity","type":"related"},{"name":"L-proline:NAD(P)+ 5-oxidoreductase activity","type":"related"},{"name":"NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"related"},{"name":"P5CR activity","type":"related"}],"termid":"GO:0004735","terms_by_termid":{"GO:0004735":null}}


id: GO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine ribonucleotide is synthesized from another pyrimidine ribonucleotide.","definition_xrefs":["ISBN:0306444747","GOC:mah","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide interconversion","termid":"GO:0015954"}


id: GO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of soluble and insoluble elastin. Specific cleavages are also produced at Ala14-Leu15 and Tyr16-Leu17 in the B chain of insulin.","definition_xrefs":["EC:3.4.24.65"],"gene_count":0,"genotype_count":0,"name":"obsolete macrophage elastase activity (obsolete GO:0004234)","secondary_identifiers":["MetaCyc:3.4.24.65-RXN"],"synonyms":[{"name":"MMP-12","type":"exact"},{"name":"human macrophage metalloelastase (HME)","type":"related"},{"name":"macrophage elastase activity","type":"exact"},{"name":"matrix metalloproteinase 12 activity","type":"related"},{"name":"metalloelastase activity","type":"related"},{"name":"metalloesterase activity","type":"exact"}],"termid":"GO:0004234"}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: GO:0150173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylcholine metabolic process","termid":"GO:0150173"}


id: MOD:01742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01742"}


id: PBO:0029459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology","termid":"PBO:0029459"}


id: PBO:0069577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 850, pseudogene","termid":"PBO:0069577"}


id: PBO:0113803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel regulatory subunit Yam8","termid":"PBO:0113803"}


id: GO:0035566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a metanephric kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney size","termid":"GO:0035564"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephros size","synonyms":[{"name":"regulation of metanephric kidney size","type":"exact"}],"termid":"GO:0035566"}


id: PBO:0057780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2682","termid":"PBO:0057780"}


id: PBO:0049774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 1","termid":"PBO:0049774"}


id: PBO:0034473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_saturation","termid":"PBO:0034473"}


id: PBO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G1 pseudogene 1","termid":"PBO:0042201"}


id: PBO:0030697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione-disulfide_reductase_activity","termid":"PBO:0030697"}


id: GO:0106296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family D-series, hydroxy fatty acids derived from docosahexaenoic acid.","definition_xrefs":["PMID:12391014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"D-series resolvin biosynthetic process","termid":"GO:0106296"}


id: GO:0019448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"L-cysteine metabolic process","termid":"GO:0046439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"L-cysteine catabolic process","synonyms":[{"name":"L-cysteine breakdown","type":"exact"},{"name":"L-cysteine catabolism","type":"exact"},{"name":"L-cysteine degradation","type":"exact"}],"termid":"GO:0019448"}


id: PBO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_mislocalized_to_nucleus_and_spindle_pole_body","termid":"PBO:0034641"}


id: GO:0032170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:mah","PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"pseudohyphal septin ring","termid":"GO:0032170"}


id: FYPO:0006150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing etoposide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on etoposide","synonyms":[{"name":"normal cell population growth in presence of etoposide","type":"exact"},{"name":"normal cell population growth on etoposide","type":"exact"},{"name":"normal cellular response to etoposide","type":"related"},{"name":"normal vegetative cell population growth on etoposide","type":"exact"}],"termid":"FYPO:0006150"}


id: PBO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte myelin glycoprotein","termid":"PBO:0061867"}


id: PBO:0017689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase Aco1 (predicted)","termid":"PBO:0017689"}


id: GO:0110116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["PMID:16377567","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"}


id: PBO:0077737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 4","termid":"PBO:0077737"}


id: FYPO:0005255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}


id: GO:0018445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.","definition_xrefs":["PMID:3301403","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"prothoracicotrophic hormone activity","termid":"GO:0018445"}


id: GO:0033995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acetylneuraminate glycoside = 2,7-anhydro-alpha-N-acetylneuraminate + an alpha-sialyl group. This reaction is the elimination of alpha-sialyl groups in N-acetylneuraminic acid glycosides, releasing 2,7-anhydro-alpha-N-acetylneuraminate.","definition_xrefs":["EC:4.2.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"anhydrosialidase activity","secondary_identifiers":["MetaCyc:4.2.2.15-RXN"],"synonyms":[{"name":"anhydroneuraminidase activity","type":"related"},{"name":"glycoconjugate sialyl-lyase (2,7-cyclizing) activity","type":"related"},{"name":"sialglycoconjugate N-acylneuraminylhydrolase (2,7-cyclizing) activity","type":"related"},{"name":"sialidase L activity","type":"related"}],"termid":"GO:0033995"}


id: GO:0102051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-tryptophan + ATP(4-) = H+ + indole-3-acetyl-tryptophan + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-tryptophan synthetase activity (obsolete GO:0102051)","termid":"GO:0102051"}


id: PBO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubp4 interactor Sfp47","termid":"PBO:0001650"}


id: PBO:0082594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class E protein of the vacuolar protein-sorting (Vps) pathway; binds Vps4p and directs it to dissociate ESCRT-III complexes; forms a functional and physical complex with Ist1p; human ortholog may be altered in breast tumors","termid":"PBO:0082594"}


id: PBO:0048543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 3, ATPase","termid":"PBO:0048543"}


id: PBO:0027147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_farnesyltranstransferase_activity","termid":"PBO:0027147"}


id: PBO:0054221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1602","termid":"PBO:0054221"}


id: PBO:0054127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1493","termid":"PBO:0054127"}


id: PBO:0076182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 6B member 2, pseudogene","termid":"PBO:0076182"}


id: GO:0050693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's ligand binding domain (LBD) domain, found in nuclear receptors. In general, the LBDs consist of three layers comprised of twelve alpha-helices and several beta-strands that are organized around a lipophilic ligand-binding pocket.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"LBD domain binding","synonyms":[{"name":"ligand binding domain binding","type":"exact"}],"termid":"GO:0050693"}


id: PATO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of the presence of a conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromaticity","termid":"PATO:0002190"}


id: PATO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000490 rhythym value (obsolete PATO:0000490)","termid":"PATO:0000490"}


id: PBO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galacose specific flocculin Gsf2","termid":"PBO:0010006"}


id: PBO:0074876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58A","termid":"PBO:0074876"}


id: GO:1902817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to microtubule.","definition_xrefs":["PMID:23087209","GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to microtubule","termid":"GO:1902816"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to microtubule","synonyms":[{"name":"down regulation of protein localisation to microtubule","type":"exact"},{"name":"down regulation of protein localization to microtubule","type":"exact"},{"name":"down-regulation of protein localisation to microtubule","type":"exact"},{"name":"down-regulation of protein localization to microtubule","type":"exact"},{"name":"downregulation of protein localisation to microtubule","type":"exact"},{"name":"downregulation of protein localization to microtubule","type":"exact"},{"name":"inhibition of protein localisation to microtubule","type":"narrow"},{"name":"inhibition of protein localization to microtubule","type":"narrow"},{"name":"negative regulation of protein localisation to microtubule","type":"exact"}],"termid":"GO:1902817"}


id: GO:0062098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["GOC:rph","PMID:27258785","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed necrotic cell death","termid":"GO:0062098"}


id: PBO:0065475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD12 pseudogene 1","termid":"PBO:0065475"}


id: GO:0097657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-nucleoside bisphosphate + H20 = 5'-nucleoside monophosphate + phosphate.","definition_xrefs":["GOC:jh2","RHEA:43532","PMID:24401123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"3',5'-nucleotide bisphosphate phosphatase activity","secondary_identifiers":["EC:3.1.3.97"],"termid":"GO:0097657"}


id: PBO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 1","termid":"PBO:0070374"}


id: PBO:0068471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 48, pseudogene","termid":"PBO:0068471"}


id: PBO:0046937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM53B antisense RNA 1","termid":"PBO:0046937"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PBO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_vegetative_cell","termid":"PBO:0030395"}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["GOC:mr","GOC:mtg_muscle","PMID:11768524","PMID:18276178","PMID:538956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: PBO:0072250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 25","termid":"PBO:0072250"}


id: GO:0030592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of an ADP-ribosyl group to a residue in double-stranded DNA.","definition_xrefs":["PMID:27471034","PMID:29520010","PMID:11592983","PMID:29361132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA ADP-ribosylation","termid":"GO:0030592"}


id: PBO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX2 divergent transcript","termid":"PBO:0045091"}


id: PBO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.2","termid":"PBO:0002267"}


id: PBO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0036167"}


id: PBO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 6","termid":"PBO:0071929"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: PBO:0087765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p); TORC2 is a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain","termid":"PBO:0087765"}


id: PBO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21","termid":"PBO:0070998"}


id: GO:0050349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + triacetate lactone = triacetate.","definition_xrefs":["EC:3.1.1.38","RHEA:22260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"triacetate-lactonase activity","secondary_identifiers":["MetaCyc:RXN-20777","KEGG_REACTION:R03702"],"synonyms":[{"name":"TAL hydrolase activity","type":"related"},{"name":"triacetate lactone hydrolase activity","type":"related"},{"name":"triacetic acid lactone hydrolase activity","type":"related"},{"name":"triacetic lactone hydrolase activity","type":"related"},{"name":"triacetolactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050349"}


id: FYPO:0002771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal protein localization to meiotic spindle pole body","synonyms":[{"name":"abnormal protein localisation to meiotic spindle pole body","type":"exact"},{"name":"abnormal protein localization to meiotic SPB","type":"exact"}],"termid":"FYPO:0002771"}


id: PBO:0045719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4","termid":"PBO:0045719"}


id: GO:0022600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:isa_complete","GOC:jid","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive system process","termid":"GO:0022600"}


id: PR:O00102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 G2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03045","PANTHER:PTHR24067:SF36","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.04","secondary_identifiers":["UniProtKB:O00102"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2G2","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00102"}


id: FYPO:0006436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is abnormal when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"abnormal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abnormal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006436"}


id: GO:0140102
data:
  {"annotated_genes":["SJAG_03877","SJAG_03332","SJAG_02350","SJAG_02821","SJAG_03713","SJAG_03773","SJAG_02281","SJAG_01958","SJAG_00943","SJAG_03016","SJAG_03008","SJAG_02024","SJAG_02417","SJAG_03755","SJAG_00722","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[88854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106388"},{"annotations":[91760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[95430,84017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[94979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[92191,110127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[91471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[87899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[104911,86216,97902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[112713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[104625,106731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008649"}]},"cv_name":"molecular_function","definition":"Catalytic activity that acts to modify a ribosomal RNA.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03713":null,"SJAG_03755":null,"SJAG_03773":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"catalytic activity, acting on a rRNA","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0140102","terms_by_termid":{"GO:0000179":null,"GO:0008649":null,"GO:0008650":null,"GO:0009383":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0106142":null,"GO:0106388":null}}


id: PBO:0058446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5011","termid":"PBO:0058446"}


id: FYPO:0000050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the kinetochore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal kinetochore morphology","termid":"FYPO:0005646"},{"relation_name":"output_of","term_name":"abnormal kinetochore organization","termid":"FYPO:0000807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal kinetochore morphology during vegetative growth","synonyms":[{"name":"abnormal kinetochore morphology during mitotic cell cycle","type":"related"},{"name":"abnormal kinetochore structure during vegetative growth","type":"narrow"},{"name":"kinetochore defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000050"}


id: PBO:0050587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 3","termid":"PBO:0050587"}


id: PBO:0048253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 1","termid":"PBO:0048253"}


id: PBO:0032705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Holliday_junctions","termid":"PBO:0032705"}


id: GO:1990665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex comprising two Annexin A2 (AnxA2) monomers and two copies of its binding partner, S100 protein p11 (S100A10).","definition_xrefs":["GOC:BHF","PMID:18799458","GOC:bf","GOC:nc","PMID:23483454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AnxA2-p11 complex","synonyms":[{"name":"(A2.p11)2 complex","type":"exact"},{"name":"(p11)2.(AnxA2)2 complex","type":"exact"},{"name":"Annexin A2 tetramer","type":"related"},{"name":"Annexin A2-p11 complex","type":"exact"},{"name":"AnxA2.p11 complex","type":"exact"},{"name":"AnxA2:S100A10 heterotetramer","type":"exact"}],"termid":"GO:1990665"}


id: GO:0070637
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[105029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleoside metabolism","type":"exact"}],"termid":"GO:0070637","terms_by_termid":{"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: _global:causally_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within,_positive_effect","termid":"_global:causally_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_positive_effect","secondary_identifiers":["RO:0002304"],"termid":"_global:causally_upstream_of,_positive_effect"}


id: GO:0097132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D2-CDK6 complex","termid":"GO:0097132"}


id: FYPO:0001944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which microtubule binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"abolished microtubule binding","synonyms":[{"name":"microtubule binding abolished","type":"exact"}],"termid":"FYPO:0001944"}


id: PBO:0084826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for cytochrome c oxidase assembly; also involved in translational regulation of Cox1p and prevention of Cox1p aggregation before assembly; located in the mitochondrial inner membrane","termid":"PBO:0084826"}


id: PBO:0058318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4691","termid":"PBO:0058318"}


id: FYPO:0002488
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0008029"}]},"cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"cytolysis","type":"exact"},{"name":"inviable, lysed cell","type":"exact"}],"termid":"FYPO:0002488","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0008029":null}}


id: GO:0030739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + O-demethylpuromycin = S-adenosyl-L-homocysteine + puromycin.","definition_xrefs":["EC:2.1.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-demethylpuromycin O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.38-RXN","RHEA:22280"],"synonyms":[{"name":"O-demethylpuromycin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:O-demethylpuromycin O-methyltransferase activity","type":"related"}],"termid":"GO:0030739"}


id: PBO:0113750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwfJ family protein, splicing factor Mug161","termid":"PBO:0113750"}


id: PBO:0089334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mba1","termid":"PBO:0089334"}


id: PBO:0058976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid leukemia factor 2","termid":"PBO:0058976"}


id: PBO:0059578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1","termid":"PBO:0059578"}


id: PR:P0CT56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.05c","synonyms":[{"name":"Spom972h-rps1401","type":"exact"}],"termid":"PR:P0CT56"}


id: GO:0120084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a filopodium, a thin, stiff protrusion extended by the endothelial tip cell of a vascular sprout.","definition_xrefs":["PMID:28264837","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endothelial tip cell filopodium assembly","termid":"GO:0120084"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PBO:0111523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 3","termid":"PBO:0111523"}


id: FYPO:0000169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal chromatin silencing at subtelomere","synonyms":[{"name":"abnormal chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at telomere","type":"related"},{"name":"abnormal chromatin silencing at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0000169"}


id: PBO:0081949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2 pseudogene 3","termid":"PBO:0081949"}


id: GO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location at the cytoplasmic side of the mitotic spindle pole body.","definition_xrefs":["GOC:vw","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex localization to mitotic spindle pole body","termid":"GO:1990735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gamma-tubulin complex localization to cytoplasmic side of mitotic spindle pole body","termid":"GO:0110121"}


id: GO:0021849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the subventricular zone of the forebrain. The interneuron precursors that these cells give rise to include adult olfactory bulb interneurons and migrate tangentially.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","PMID:12626695","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in subventricular zone","termid":"GO:0021849"}


id: PBO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_spindle_microtubules_to_kinetochore","termid":"PBO:0031054"}


id: GO:0090685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus.","definition_xrefs":["GOC:mah","PMID:26305931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization to nucleus","synonyms":[{"name":"RNA localisation to nucleus","type":"exact"}],"termid":"GO:0090685"}


id: _global:non_functional_homolog_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relationship between a pseudogenic feature and its functional ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_functional_homolog_of","termid":"_global:non_functional_homolog_of"}


id: PBO:0057130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 214","termid":"PBO:0057130"}


id: GO:0033498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, via the intermediate D-galactonate.","definition_xrefs":["MetaCyc:GALDEG-PWY","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactose catabolic process via D-galactonate","synonyms":[{"name":"galactose breakdown via D-galactonate","type":"exact"},{"name":"galactose catabolism via D-galactonate","type":"exact"},{"name":"galactose degradation via D-galactonate","type":"exact"}],"termid":"GO:0033498"}


id: PBO:0086643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER","termid":"PBO:0086643"}


id: MOD:01929
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an either an L-asparagine residue or an L-aspartic acid residue with an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine.","definition_xrefs":["PubMed:11000116","PubMed:6503713","RESID:AA0294","ChEBI:21862","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N-(beta-Aspartyl)-Lysine (Crosslink)","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:01929"}


id: PBO:0089907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5'- exoribonuclease Rex1","termid":"PBO:0089907"}


id: FYPO:0006347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mechlorethamine. Cells stop growing (and may die) at a concentration of mechlorethamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to mechlorethamine","synonyms":[{"name":"hypersensitive to mechlorethamine","type":"exact"},{"name":"sensitive to 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"sensitive to HN2","type":"exact"},{"name":"sensitive to bis(2-chloroethyl)methylamine","type":"exact"},{"name":"sensitive to mechlorethamine during mitotic cell cycle","type":"related"},{"name":"sensitive to mechlorethamine during vegetative growth","type":"exact"}],"termid":"FYPO:0006347"}


id: PBO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg16","termid":"PBO:0036462"}


id: GO:0106413
data:
  {"annotated_genes":["SJAG_03240","SJAG_00174","SJAG_01041","SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114920,86045,101227,106162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106414"},{"annotations":[106163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[106164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[101228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[114921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[114922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[86046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA-uracil + NAD(P)+ = RNA-dihydrouridine + NAD(P)H + H+.","definition_xrefs":["PMID:12581659","PMID:25073379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"RNA dihydrouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106413","terms_by_termid":{"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0106414":null}}


id: SO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyl_N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyl_N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:013"],"synonyms":[{"name":"N6 methyl N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-methyl-N6-threonylcarbamoyladenosine","type":"exact"},{"name":"m6t6A","type":"exact"}],"termid":"SO:0001307"}


id: FYPO:0001899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during glucose starvation","synonyms":[{"name":"P bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose depletion","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose deprivation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose limitation","type":"related"},{"name":"P-bodies present in reduced numbers during glucose starvation","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"decreased P-body number during glucose starvation","type":"exact"},{"name":"decreased number of P-bodies present during glucose starvation","type":"exact"},{"name":"fewer P-bodies present during glucose starvation","type":"exact"}],"termid":"FYPO:0001899"}


id: PBO:0079183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 12, pseudogene","termid":"PBO:0079183"}


id: PBO:0034398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator_(obsolete_requires_regulator)","termid":"PBO:0034398"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: PATO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling or containing flesh.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/fleshy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fleshy","termid":"PATO:0002351"}


id: FYPO:0000584
data:
  {"alleles_by_uniquename":{"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115708],"is_not":false,"summary":null,"term":"FYPO:0000584"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02819":null},"genotype_count":1,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased sporulation frequency","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_02819"],"single_locus_genotype_uniquenames":["efc25delta"],"synonyms":[{"name":"decreased frequency of ascospore formation","type":"exact"},{"name":"decreased spore viability","type":"related"},{"name":"decreased sporulation","type":"exact"},{"name":"reduced spore viability","type":"related"},{"name":"reduced sporulation frequency","type":"exact"},{"name":"sporulation: decreased","type":"related"}],"termid":"FYPO:0000584","terms_by_termid":{"FYPO:0000584":null,"FYPO_EXT:0000002":null}}


id: GO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + pentanoyl-CoA = 3-propylmalate + CoA + H+.","definition_xrefs":["RHEA:14457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-propylmalate synthase activity","secondary_identifiers":["EC:2.3.3.12","MetaCyc:3-PROPYLMALATE-SYNTHASE-RXN","KEGG_REACTION:R03040"],"synonyms":[{"name":"3-(n-propyl)-malate synthase activity","type":"related"},{"name":"3-propylmalate glyoxylate-lyase (CoA-pentanoylating) activity","type":"related"},{"name":"N-propylmalate synthase activity","type":"related"},{"name":"beta-n-propylmalate synthase activity","type":"related"},{"name":"pentanoyl-CoA:glyoxylate C-pentanoyltransferase (thioester-hydrolysing, 1-carboxybutyl-forming)","type":"related"}],"termid":"GO:0050442"}


id: PBO:0040361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit k","termid":"PBO:0040361"}


id: GO:0015526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexose phosphate(out) + phosphate(in) = hexose phosphate(in) +  phosphate(out).","definition_xrefs":["TC:2.A.1.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose phosphate transmembrane transporter activity","termid":"GO:0015119"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"hexose-phosphate:phosphate antiporter activity","synonyms":[{"name":"hexose-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015526"}


id: PBO:0064823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3E","termid":"PBO:0064823"}


id: PBO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 7","termid":"PBO:0070876"}


id: PR:O14062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.04","synonyms":[{"name":"Spom972h-rps1201","type":"exact"}],"termid":"PR:O14062"}


id: GO:0052902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + O2 + spermidine = 3-aminopropanal + H2O2 + putrescine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity (obsolete GO:0052902)","termid":"GO:0052902"}


id: PBO:0029271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029271"}


id: GO:0097484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single dendrite involved in cellular development.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite extension","termid":"GO:0097484"}


id: PR:Q10082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.03c","synonyms":[{"name":"Spom972h-SPAC11D3.03c","type":"exact"}],"termid":"PR:Q10082"}


id: PBO:0064402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase pseudogene 1","termid":"PBO:0064402"}


id: PBO:0067734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 33","termid":"PBO:0067734"}


id: GO:0102128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-dihydrocoumaroyl-CoA + 3 malonyl-CoA + 3 H+ = phloretin + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["PMID:20356611","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chalcone synthase activity (obsolete GO:0102128)","termid":"GO:0102128"}


id: PBO:0082393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of C-terminal domain kinase I (CTDK-I); which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082393"}


id: PBO:0113403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0113403"}


id: GO:0046417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chorismate, the anion of (3R-trans)-3-((1-carboxyethenyl)oxy)-4-hydroxy-1,5-cyclohexadiene-1-carboxylic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"chorismate metabolic process","synonyms":[{"name":"chorismate metabolism","type":"exact"}],"termid":"GO:0046417"}


id: PBO:0055906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 30","termid":"PBO:0055906"}


id: PBO:0029315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029315"}


id: PBO:0070444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 1","termid":"PBO:0070444"}


id: PBO:0046597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 7","termid":"PBO:0046597"}


id: FYPO:0000674
data:
  {"alleles_by_uniquename":{"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115821,115822,115823,115825],"is_not":false,"summary":null,"term":"FYPO:0000674"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_03198":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03198","SJAG_01946","SJAG_03575"],"name":"normal cell population growth at high temperature","references_by_uniquename":{"PMID:23786411":null},"synonyms":[{"name":"heat sensitivity: normal","type":"related"},{"name":"normal growth at high temperature","type":"broad"},{"name":"normal vegetative cell population growth at high temperature","type":"exact"}],"termid":"FYPO:0000674","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000674":null}}


id: GO:0047754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + choline = adenosine 3',5'-diphosphate + choline sulfate + H+.","definition_xrefs":["RHEA:21984","EC:2.8.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"choline sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R01027","MetaCyc:CHOLINE-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:choline sulfotransferase activity","type":"related"},{"name":"choline sulphokinase activity","type":"related"},{"name":"choline sulphotransferase activity","type":"exact"}],"termid":"GO:0047754"}


id: SO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an clockwise, right handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, +80 degrees psi +120 degrees < +180 degrees, residue(i+1): +20 degrees < phi < +140 degrees, -40 < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_right_handed_type_two","secondary_identifiers":["BS:00233"],"synonyms":[{"name":"st turn right handed type two","type":"exact"},{"name":"st_turn_iir","type":"exact"}],"termid":"SO:0001145"}


id: GO:1990031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Dense plexus formed by the descending collaterals of cerebellar basket cells that wrap around a Purkinje cell axonal initial segment.","definition_xrefs":["NIF_Subcellular:sao109906988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pinceau fiber","termid":"GO:1990031"}


id: GO:0022030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of glial cells through the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon glial cell migration","termid":"GO:0022030"}


id: PBO:0003530
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BIN3","termid":"PBO:0003530"}


id: GO:0015211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"purine nucleoside transmembrane transporter activity","termid":"GO:0015211"}


id: GO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy, a state of functional inactivation that occurs as part of tolerance induction, in B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell anergy","termid":"GO:0002515"},{"relation_name":"part_of","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"part_of","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell anergy","synonyms":[{"name":"central B lymphocyte anergy","type":"exact"},{"name":"central B-cell anergy","type":"exact"},{"name":"central B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002341"}


id: GO:0061150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an the renal system into a series of segments along its proximal/distal axis.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"is_a","term_name":"renal system pattern specification","termid":"GO:0072048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system segmentation","synonyms":[{"name":"urinary tract segmentation","type":"exact"}],"termid":"GO:0061150"}


id: PBO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPF divergent transcript","termid":"PBO:0075183"}


id: FYPO:0009002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitochondrion distribution phenotype observed during mitotic interphase in which the length fraction of cytoplasmic microtubules that is bound to mitochondria is increased with respect to the wild type.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased mitochondrial-associated microtubule fraction during mitotic interphase","synonyms":[{"name":"increased microtubule-associated mitochondrial fraction during mitotic interphase","type":"related"}],"termid":"FYPO:0009002"}


id: GO:0045211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic membrane","synonyms":[{"name":"post-synaptic membrane","type":"exact"}],"termid":"GO:0045211"}


id: PBO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase inhibitor, endosulfine Igo1","termid":"PBO:0090078"}


id: GO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle regulatory process in which the mitotic cell cycle is halted during G1 as a result of a pheromone stimulus. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:dph","GOC:tb","GOC:clt","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cell cycle G1 arrest in response to pheromone","secondary_identifiers":["GO:0030571"],"synonyms":[{"name":"cell cycle arrest in response to pheromone","type":"broad"}],"termid":"GO:0000751"}


id: PBO:0086540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR001W is not an essential gene","termid":"PBO:0086540"}


id: GO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of NK cell mediated cell death","type":"exact"},{"name":"negative regulation of NK cell mediated cell killing","type":"exact"},{"name":"negative regulation of NK cell mediated cytolysis","type":"related"},{"name":"negative regulation of NK cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell death","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"negative regulation of natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0045953"}


id: MOD:01168
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to dehydroalanine.","definition_xrefs":["PubMed:10220322","PubMed:1815586","RESID:AA0181","PubMed:2914619","PubMed:6838602","PubMed:7947813","PubMed:1547888","PubMed:8239649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Ser)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01168"}


id: GO:0008311
data:
  {"annotated_genes":["SJAG_02298","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85140,106483],"is_not":false,"summary":null,"term":"GO:0008311"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:22562358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-DNA exonuclease activity","termid":"GO:0008296"},{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0004527","GO:0016787","GO:0003824","GO:0140097","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"double-stranded DNA 3'-5' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.2","MetaCyc:3.1.11.2-RXN"],"synonyms":[{"name":"double-stranded DNA 3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 3'-5' exodeoxyribonuclease activity","type":"related"},{"name":"exonuclease III activity","type":"narrow"},{"name":"exoribonuclease III activity","type":"narrow"}],"termid":"GO:0008311","terms_by_termid":{"GO:0008311":null}}


id: PBO:0077389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 129, E3 ubiquitin ligase","termid":"PBO:0077389"}


id: FYPO:0005581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains glycerophospholipids that have shorter fatty acid chain residues than normal.","definition_xrefs":["PomBase:mah","PMID:27053105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"short glycerophospholipids","synonyms":[{"name":"decreased glycerophospholipid fatty acid chain length","type":"exact"},{"name":"reduced glycerophospholipid fatty acid chain length","type":"exact"},{"name":"short glycerophospholipids during mitotic cell cycle","type":"related"},{"name":"short glycerophospholipids during vegetative growth","type":"exact"}],"termid":"FYPO:0005581"}


id: PBO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 3","termid":"PBO:0060659"}


id: PBO:0090071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11","termid":"PBO:0090071"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: SO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2A histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AK5_acetylation_site","synonyms":[{"name":"H2AK5 acetylation site","type":"exact"},{"name":"H2AK5ac","type":"exact"}],"termid":"SO:0001938"}


id: PBO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt3","termid":"PBO:0017681"}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18206972","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: PBO:0068869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 109, pseudogene","termid":"PBO:0068869"}


id: GO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphocholine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = 1-acyl-2-[(R)-12-hydroxyoleoyl]-sn-glycero-3-phosphocholine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"phosphatidylcholine 12-monooxygenase activity","secondary_identifiers":["MetaCyc:PHOSPHATIDYLCHOLINE-12-MONOOXYGENASE-RXN","EC:1.14.18.4","KEGG_REACTION:R03476"],"synonyms":[{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine,NADH:oxygen oxidoreductase (12-hydroxylating)","type":"related"},{"name":"oleate D12-hydroxylase activity","type":"exact"},{"name":"oleate Delta(12)-hydroxylase activity","type":"related"},{"name":"oleate delta12-hydroxylase activity","type":"related"},{"name":"oleate delta12-monooxygenase activity","type":"related"},{"name":"ricinoleic acid synthase activity","type":"related"}],"termid":"GO:0050183"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_03166","SJAG_02515","SJAG_04399","SJAG_04788","SJAG_03653","SJAG_03623","SJAG_04125","SJAG_00141","SJAG_05181","SJAG_01162","SJAG_00489","SJAG_04403","SJAG_02630","SJAG_04632","SJAG_04953","SJAG_03303","SJAG_01199","SJAG_00668","SJAG_01734","SJAG_04823","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57334,57335,63178,64879,64880,67578,68040,68041,68042,68043,91765,101749,101832,102905,103324],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[113874,101568,91764,96557,114789,105358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[95841,68200,57870,64732,85568,89707,96714,106664,85989,106620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["UniProtKB:O74396","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: PBO:0082049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase); required for riboflavin biosynthesis from ribulose-5-phosphate, also has an unrelated function in mitochondrial respiration","termid":"PBO:0082049"}


id: GO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.","definition_xrefs":["GOC:dph","EC:2.7.7.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase activity","secondary_identifiers":["RHEA:31331"],"termid":"GO:0061598"}


id: GO:0034088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"mitotic cohesion stability","type":"related"}],"termid":"GO:0034088"}


id: PBO:0078013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 3","termid":"PBO:0078013"}


id: PBO:0090926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns3K complex subunit Atg38","termid":"PBO:0090926"}


id: PR:O14082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.17","synonyms":[{"name":"Spom972h-SPACUNK4.17","type":"exact"}],"termid":"PR:O14082"}


id: GO:0050902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of loosely bound or rolling leukocytes by signals displayed on blood vessel endothelial cells, which is typically the second step in cellular extravasation.","definition_xrefs":["PMID:7507411","PMID:14680625","PMID:14708592","PMID:8600538","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesive activation","synonyms":[{"name":"leukocyte adhesive triggering","type":"exact"}],"termid":"GO:0050902"}


id: GO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031552)","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"negative regulation of BDNF receptor activity","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031552"}


id: PBO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","termid":"PBO:0036526"}


id: PBO:0012605
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TPI1","termid":"PBO:0012605"}


id: PBO:0078195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-5","termid":"PBO:0078195"}


id: GO:0071077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of adenosine 3',5'-bisphosphate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","synonyms":[{"name":"adenosine 3',5'-diphosphate transporter activity","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0071077"}


id: FYPO:0006946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains more than one septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"swollen elongated multiseptate vegetative cell","termid":"FYPO:0007436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0000004","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"inviable swollen elongated multiseptate vegetative cell","synonyms":[{"name":"inviable large elongated multiseptate vegetative cell","type":"related"},{"name":"lethal; swollen elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0006946"}


id: GO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which autophagosomes, double-membraned vesicles containing cytoplasmic material, fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.","definition_xrefs":["PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagosome-lysosome fusion","synonyms":[{"name":"autophagosome fusion","type":"broad"},{"name":"autophagosome-vacuole fusion","type":"exact"}],"termid":"GO:0061909"}


id: PBO:0063225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 10","termid":"PBO:0063225"}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: PBO:0114275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kexin, type I membrane endopeptidase","termid":"PBO:0114275"}


id: GO:1901740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast fusion.","definition_xrefs":["GOC:TermGenie","PMID:21364645","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of syncytium formation by plasma membrane fusion","termid":"GO:0034242"},{"relation_name":"is_a","term_name":"regulation of myoblast fusion","termid":"GO:1901739"},{"relation_name":"negatively_regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast fusion","synonyms":[{"name":"down regulation of myoblast fusion","type":"exact"},{"name":"down-regulation of myoblast fusion","type":"exact"},{"name":"downregulation of myoblast fusion","type":"exact"},{"name":"inhibition of myoblast fusion","type":"narrow"}],"termid":"GO:1901740"}


id: PBO:0017883
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKbp12 Homolog","termid":"PBO:0017883"}


id: PR:Q96VG1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TP53-regulated inhibitor of apoptosis 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02571","PRO:DNx","PANTHER:PTHR21329:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.18","secondary_identifiers":["UniProtKB:Q96VG1"],"synonyms":[{"name":"Spom972h-TRIAP1","type":"exact"}],"termid":"PR:Q96VG1"}


id: FYPO:0001265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular hyperosmotic response","synonyms":[{"name":"increased protein phosphorylation during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular hyperosmotic response during vegetative growth","type":"exact"}],"termid":"FYPO:0001265"}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: PBO:0003880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 ortholog (predicted)","termid":"PBO:0003880"}


id: PBO:0081270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 34","termid":"PBO:0081270"}


id: GO:0015869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of protein-DNA complexes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex transport","synonyms":[{"name":"DNA-protein complex transport","type":"exact"}],"termid":"GO:0015869"}


id: FYECO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ anidulafungin","termid":"FYECO:0000398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin LD","termid":"FYECO:0000400"}


id: PBO:0066194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 14","termid":"PBO:0066194"}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: PBO:0039577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 6","termid":"PBO:0039577"}


id: GO:0070265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A type of cell death that is morphologically characterized by an increasingly translucent cytoplasm, swelling of organelles, minor ultrastructural modifications of the nucleus (specifically, dilatation of the nuclear membrane and condensation of chromatin into small, irregular, circumscribed patches) and increased cell volume (oncosis), culminating in the disruption of the plasma membrane and subsequent loss of intracellular contents. Necrotic cells do not fragment into discrete corpses as their apoptotic counterparts do. Moreover, their nuclei remain intact and can aggregate and accumulate in necrotic tissues.","definition_xrefs":["PMID:18846107","GOC:mtg_apoptosis","PMID:20823910"],"gene_count":0,"genotype_count":0,"name":"obsolete necrotic cell death (obsolete GO:0070265)","synonyms":[{"name":"cellular necrosis","type":"exact"},{"name":"necrosis","type":"broad"}],"termid":"GO:0070265"}


id: FYPO:0003210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum that is in an abnormal location and is not perpendicular to the long axis of the cell. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"misoriented septum during vegetative growth","termid":"FYPO:0001390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000138","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized, misoriented septum","synonyms":[{"name":"abnormal septum localization and orientation","type":"related"},{"name":"abnormal septum location and orientation","type":"exact"},{"name":"abnormal septum position and orientation","type":"exact"},{"name":"abnormal septum positioning and orientation","type":"related"},{"name":"asymmetric, misoriented septum","type":"exact"},{"name":"asymmetrically located, misoriented septum","type":"exact"},{"name":"mislocalised, misoriented septum","type":"exact"},{"name":"mislocalized, misoriented septum during mitotic cell cycle","type":"related"},{"name":"mislocalized, misoriented septum during vegetative growth","type":"exact"},{"name":"misplaced, misoriented septum","type":"exact"}],"termid":"FYPO:0003210"}


id: PBO:0034796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family plus-end microtubule motor Tea2","termid":"PBO:0034796"}


id: PBO:0089420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA binding protein, human KNOP1 ortholog, implicated in mRNA processing","termid":"PBO:0089420"}


id: GO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prostaglandin F2alpha = H+ + NADPH + prostaglandin D2.","definition_xrefs":["RHEA:10140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F synthase activity","secondary_identifiers":["EC:1.1.1.188","MetaCyc:1.1.1.188-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 11-oxidoreductase activity","type":"related"},{"name":"NADPH-dependent prostaglandin D2 11-keto reductase activity","type":"related"},{"name":"PGD(2) 11-ketoreductase activity","type":"related"},{"name":"PGD2 11-ketoreductase activity","type":"related"},{"name":"PGF synthetase activity","type":"related"},{"name":"PGF2alpha synthetase activity","type":"related"},{"name":"prostaglandin 11-keto reductase activity","type":"related"},{"name":"prostaglandin 11-ketoreductase activity","type":"related"},{"name":"prostaglandin D2-ketoreductase activity","type":"related"},{"name":"prostaglandin F synthetase activity","type":"related"},{"name":"prostaglandin-D(2) 11-ketoreductase activity","type":"related"},{"name":"prostaglandin-D(2) 11-reductase activity","type":"related"},{"name":"prostaglandin-D(2) ketoreductase activity","type":"related"},{"name":"prostaglandin-D2 11-ketoreductase activity","type":"related"},{"name":"prostaglandin-D2 11-reductase activity","type":"related"},{"name":"prostaglandin-D2 ketoreductase activity","type":"related"},{"name":"prostaglandin-F synthase activity","type":"related"},{"name":"prostaglandin-F synthetase activity","type":"related"},{"name":"reductase, 15-hydroxy-11-oxoprostaglandin","type":"related"},{"name":"synthetase, prostaglandin F2alpha","type":"related"}],"termid":"GO:0047017"}


id: GO:0070145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling asparagine to asparaginyl-tRNA in a mitochondrion, catalyzed by asparaginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparaginyl-tRNA aminoacylation","termid":"GO:0006421"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"mitochondrial asparaginyl-tRNA aminoacylation","termid":"GO:0070145"}


id: GO:0015842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The active transport of aminergic neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action proton pumps.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"aminergic neurotransmitter loading into synaptic vesicle","termid":"GO:0015842"}


id: PBO:0088523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5","termid":"PBO:0088523"}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: PBO:0091693
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TXNL1","termid":"PBO:0091693"}


id: GO:0034247
data:
  {"annotated_genes":["SJAG_03112"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99568],"is_not":false,"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The process of removing sections of a primary snoRNA transcript to remove sequences not present in the mature form of the snoRNA and joining the remaining sections to form the mature form of the snoRNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03112":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"snoRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034247","terms_by_termid":{"GO:0034247":null}}


id: PR:Q10479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01860","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.07","secondary_identifiers":["UniProtKB:Q10479"],"synonyms":[{"name":"Dol-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichyl alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG8","type":"exact"},{"name":"asparagine-linked glycosylation protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10479"}


id: GO:1900326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotriulose transport","termid":"GO:1900324"},{"relation_name":"positively_regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltotriulose transport","synonyms":[{"name":"activation of maltotriulose transport","type":"narrow"},{"name":"up regulation of maltotriulose transport","type":"exact"},{"name":"up-regulation of maltotriulose transport","type":"exact"},{"name":"upregulation of maltotriulose transport","type":"exact"}],"termid":"GO:1900326"}


id: GO:0016507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex possessing three activities in two subunits (alpha and beta) that catalyzes three steps of the fatty acid beta-oxidation cycle within the mitochondrial matrix. The alpha subunit comprises the enoyl-CoA hydratase (ECH) and 3-hydroxyacyl-CoA dehydrogenase (HACD) activities, and the beta subunit contains the acetyl-CoA C-acyltransferase (KACT)/thiolase activity.","definition_xrefs":["PMID:29915090","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial fatty acid beta-oxidation multienzyme complex","synonyms":[{"name":"fatty acid beta-oxidation multienzyme complex","type":"broad"},{"name":"trifunctional enzyme","type":"related"}],"termid":"GO:0016507"}


id: PBO:0043865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 3","termid":"PBO:0043865"}


id: PBO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase Tdh1","termid":"PBO:0004216"}


id: GO:0036359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of potassium ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["GOC:gap","PMID:25287933","PMID:15034090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal potassium excretion","synonyms":[{"name":"renal K(+) excretion","type":"exact"},{"name":"renal K+ elimination","type":"exact"},{"name":"renal potassium ion excretion","type":"exact"}],"termid":"GO:0036359"}


id: PBO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Par A family ATPase/WD repeat iron cluster assembly fusion protein (predicted)","termid":"PBO:0000227"}


id: GO:2000601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:21454476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"positive regulation of actin nucleation","termid":"GO:0051127"},{"relation_name":"positively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"positive regulation of actin filament branch nucleation","type":"exact"},{"name":"positive regulation of branched actin filament nucleation","type":"exact"}],"termid":"GO:2000601"}


id: GO:0048529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: magnesium protoporphyrin IX 13-monomethyl ester + 3 NADPH + 3 H+ + 3 O2 = divinylprotochlorophyllide + 3 NADP+ + 5 H2O.","definition_xrefs":["EC:1.14.13.81","RHEA:33235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","synonyms":[{"name":"Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","type":"related"},{"name":"Mg-protoporphyrin IX monomethyl ester oxidative cyclase activity","type":"related"},{"name":"magnesium-protoporphyrin-IX 13-monomethyl ester,NADPH:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0048529"}


id: PBO:0065123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D1","termid":"PBO:0065123"}


id: PBO:0083743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the outer kinetochore MIND complex; joins kinetochore subunits contacting DNA to those contacting microtubules; phosphorylation promotes interaction between outer and inner kinetochore proteins; kinetochore receptor for monopolin, via interaction with Csm1p; essential for both meiotic and mitotic chromosome segregation; MIND complex consists of Mtw1p, Nnf1p, Nsl1p and Dsn1p; phosphorylated by monopolin subunit, Hrr25p and Aurora kinase, Ipl1p; modified by sumoylation","termid":"PBO:0083743"}


id: PBO:0062688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 9 pseudogene","termid":"PBO:0062688"}


id: GO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of the alpha or beta subunit of the inhibitor of kappaB kinase complex (IKK).","definition_xrefs":["PMID:20685151"],"gene_count":0,"genotype_count":0,"name":"obsolete NF-kappaB-inducing kinase activity (obsolete GO:0004704)","synonyms":[{"name":"NIK","type":"exact"}],"termid":"GO:0004704"}


id: GO:0006015
data:
  {"annotated_genes":["SJAG_04970","SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94278,106447,111468],"is_not":false,"summary":null,"term":"GO:0006015"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate biosynthetic process","termid":"GO:0046390"},{"relation_name":"is_a","term_name":"5-phosphoribose 1-diphosphate metabolic process","termid":"GO:0046391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-phosphoribose 1-diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-phosphoribose 1-diphosphate anabolism","type":"exact"},{"name":"5-phosphoribose 1-diphosphate biosynthesis","type":"exact"},{"name":"5-phosphoribose 1-diphosphate formation","type":"exact"},{"name":"5-phosphoribose 1-diphosphate synthesis","type":"exact"},{"name":"5-phosphoribosyl-1-pyrophosphate biosynthesis","type":"exact"},{"name":"5-phosphoribosyl-1-pyrophosphate biosynthetic process","type":"exact"},{"name":"PRPP biosynthetic process","type":"exact"}],"termid":"GO:0006015","terms_by_termid":{"GO:0006015":null}}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: GO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to benomyl (obsolete GO:0072755)","termid":"GO:0072755"}


id: GO:0052363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of protein in other organism involved in symbiotic interaction (obsolete GO:0052363)","synonyms":[{"name":"catabolism by organism of protein in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052363"}


id: GO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in leptotene or zygotene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"early recombination nodule","termid":"GO:0005714"}


id: PBO:0056013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM8 homolog, U6 small nuclear RNA associated","termid":"PBO:0056013"}


id: GO:0099003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any vesicle-mediated transport that occurs in a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}


id: GO:1902860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propionyl-CoA.","definition_xrefs":["PMID:15514053","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionyl-CoA biosynthetic process","synonyms":[{"name":"propionyl-CoA anabolism","type":"exact"},{"name":"propionyl-CoA biosynthesis","type":"exact"},{"name":"propionyl-CoA formation","type":"exact"},{"name":"propionyl-CoA synthesis","type":"exact"}],"termid":"GO:1902860"}


id: PBO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD59 molecule (CD59 blood group)","termid":"PBO:0042333"}


id: PBO:0058993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, LST8 homolog","termid":"PBO:0058993"}


id: PR:Q9C0U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug153 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 153 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.19","synonyms":[{"name":"Spom972h-mug153","type":"exact"}],"termid":"PR:Q9C0U3"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["PMID:19575011","GOC:TermGenie","GO_REF:0000059","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"},{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-UTR binding","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: GO:0047629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H2O = IDP + NH3.","definition_xrefs":["EC:3.5.4.7","MetaCyc:ADP-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"ADP deaminase activity","secondary_identifiers":["RHEA:12741"],"synonyms":[{"name":"ADP aminohydrolase activity","type":"related"},{"name":"adenosine diphosphate deaminase activity","type":"related"},{"name":"adenosinepyrophosphate deaminase activity","type":"related"}],"termid":"GO:0047629"}


id: PBO:0013824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7G(5')pppN diphosphatase Nhm1","termid":"PBO:0013824"}


id: PBO:0053719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 929","termid":"PBO:0053719"}


id: GO:1901121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tobramycin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00971","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"tobramycin metabolic process","termid":"GO:1901119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tobramycin biosynthetic process","synonyms":[{"name":"tobramycin anabolism","type":"exact"},{"name":"tobramycin biosynthesis","type":"exact"},{"name":"tobramycin formation","type":"exact"},{"name":"tobramycin synthesis","type":"exact"}],"termid":"GO:1901121"}


id: PBO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase involved in endocytosis Cki1","termid":"PBO:0036484"}


id: GO:0052696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a flavonoid by the conjugation of glucuronic acid. The resultant flavonoid glucuronosides are often much more water-soluble than the precursor.","definition_xrefs":["PMID:20056724","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"flavonoid glucuronidation","synonyms":[{"name":"flavonoid glucuronide biosynthesis","type":"exact"},{"name":"flavonoid glucuronide biosynthetic process","type":"exact"},{"name":"flavonoid glucuronoside biosynthesis","type":"exact"},{"name":"flavonoid glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:0052696"}


id: GO:0043151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via single-strand annealing.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via single-strand annealing","synonyms":[{"name":"DNA synthesis during double-strand break repair via single-strand annealing","type":"related"}],"termid":"GO:0043151"}


id: GO:0070521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD82, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD82 complex","termid":"GO:0070521"}


id: GO:0098704
data:
  {"annotated_genes":["SJAG_03608","SJAG_03960","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110687,113718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[107172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[92340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[92341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"carbohydrate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097319"],"synonyms":[{"name":"carbohydrate import into cell","type":"exact"}],"termid":"GO:0098704","terms_by_termid":{"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: PBO:0079759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoupling protein 2","termid":"PBO:0079759"}


id: PBO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1 interacting factor 1, autophagy protein","termid":"PBO:0001649"}


id: GO:1903865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sigma factor antagonist activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","GOC:TermGenie","PMID:23687042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sigma factor antagonist complex","termid":"GO:1903865"}


id: PBO:0034409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification_(obsolete_requires_modification)","termid":"PBO:0034409"}


id: GO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The non-central region or periphery of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","PMID:16260607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peripheral region of growth cone","termid":"GO:0090725"}


id: PBO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 intronic transcript 1","termid":"PBO:0045033"}


id: GO:0102884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = zingiberene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"alpha-zingiberene synthase activity","secondary_identifiers":["MetaCyc:RXN-8425","RHEA:28643"],"termid":"GO:0102884"}


id: PBO:0048410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin","termid":"PBO:0048410"}


id: GO:1902657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a prospore membrane.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","GOC:dph","PMID:24036347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to prospore membrane","secondary_identifiers":["GO:1902658","GO:0072693"],"synonyms":[{"name":"establishment of protein localisation in prospore membrane","type":"related"},{"name":"establishment of protein localisation to prospore membrane","type":"related"},{"name":"establishment of protein localization in prospore membrane","type":"related"},{"name":"establishment of protein localization to prospore membrane","type":"related"},{"name":"protein localisation in prospore membrane","type":"exact"},{"name":"protein localisation to prospore membrane","type":"exact"},{"name":"protein localization in prospore membrane","type":"exact"},{"name":"protein targeting to FSM","type":"related"},{"name":"protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"protein targeting to forespore membrane","type":"related"},{"name":"protein targeting to prospore membrane","type":"related"},{"name":"protein-prospore membrane targeting","type":"related"}],"termid":"GO:1902657"}


id: GO:1904518
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93551],"is_not":false,"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a cytoplasmic microtubule plus-end.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule plus-end","termid":"GO:1904825"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytoplasmic microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in cytoplasmic microtubule plus-end","type":"exact"},{"name":"protein localisation to cytoplasmic microtubule plus-end","type":"exact"},{"name":"protein localization in cytoplasmic microtubule plus-end","type":"exact"}],"termid":"GO:1904518","terms_by_termid":{"GO:1904518":null}}


id: FYECO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CdSO4","synonyms":[{"name":"+ cadmium sulfate","type":"related"}],"termid":"FYECO:0000247"}


id: PBO:0079719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBR5 divergent transcript","termid":"PBO:0079719"}


id: PBO:0031200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_occurrence_of_normal_mitotic_cell_cycle_arrest","termid":"PBO:0031200"}


id: PBO:0091741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, paralog of SPNCRNA.118","termid":"PBO:0091741"}


id: SO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence from the end of a YAC clone that may provide a highly specific marker.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"YAC","termid":"SO:0000152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAC_end","synonyms":[{"name":"YAC end","type":"exact"}],"termid":"SO:0001498"}


id: PBO:0082861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm B; part of heteroheptameric complex (with Smd1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm B and Sm B'","termid":"PBO:0082861"}


id: PBO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_localization","termid":"PBO:0031830"}


id: PBO:0075652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 1","termid":"PBO:0075652"}


id: GO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex involved in the translocation of proteins across the cytoplasmic membrane. In Gram-negative bacteria, Sec-translocated proteins are subsequently secreted via the type II, IV, or V secretion systems. Sec complex components include SecA, D, E, F, G, Y and YajC.","definition_xrefs":["GOC:mtg_sensu","PMID:15223057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cell envelope Sec protein transport complex","synonyms":[{"name":"Sec complex","type":"broad"},{"name":"Sec secretion complex","type":"narrow"},{"name":"Sec translocation complex","type":"narrow"},{"name":"plasma membrane Sec complex","type":"related"}],"termid":"GO:0031522"}


id: PBO:0061367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 27","termid":"PBO:0061367"}


id: PBO:0041638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 E","termid":"PBO:0041638"}


id: GO:1990248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:15660129"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990248)","termid":"GO:1990248"}


id: PBO:0038790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1 pseudogene 1","termid":"PBO:0038790"}


id: PBO:0070340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 13","termid":"PBO:0070340"}


id: PBO:0062988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 3","termid":"PBO:0062988"}


id: PBO:0110346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDCA7 pseudogene 2","termid":"PBO:0110346"}


id: PBO:0069522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 791, pseudogene","termid":"PBO:0069522"}


id: PR:C6Y4A4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.16 gene.","definition_xrefs":["UniProtKB:C6Y4A4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C688.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.16","synonyms":[{"name":"Spom972h-SPAC688.16","type":"exact"}],"termid":"PR:C6Y4A4"}


id: PBO:0027489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_during_G0","termid":"PBO:0027489"}


id: PBO:0067953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 255","termid":"PBO:0067953"}


id: PR:Q9P7D8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.10 gene.","definition_xrefs":["UniProtKB:Q9P7D8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein P4H10.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.10","synonyms":[{"name":"Spom972h-SPBP4H10.10","type":"exact"}],"termid":"PR:Q9P7D8"}


id: PBO:0031783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cytokinesis","termid":"PBO:0031783"}


id: PBO:0053064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large tumor suppressor kinase 1","termid":"PBO:0053064"}


id: PBO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 2","termid":"PBO:0046432"}


id: FYPO:0006552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cytoplasm","termid":"FYPO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cytoplasm","synonyms":[{"name":"increased protein localisation to cytoplasm","type":"exact"},{"name":"increased protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006552"}


id: GO:0003383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction","termid":"GO:0003383"}


id: PBO:0083532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C","termid":"PBO:0083532"}


id: GO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microspike, a dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:12153987","PMID:19095735","ISBN:0815316194","PMID:11429692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microspike assembly","synonyms":[{"name":"microspike biogenesis","type":"related"},{"name":"microspike biosynthesis","type":"exact"},{"name":"microspike formation","type":"exact"}],"termid":"GO:0030035"}


id: PBO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta Rev7 (predicted)","termid":"PBO:0003997"}


id: GO:0000770
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090539"}]},"cv_name":"biological_process","definition":"The directed movement of a peptide pheromone out of a cell by a secretion or export pathway used solely for the export of peptide pheromones.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"peptide pheromone export","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007325"],"synonyms":[{"name":"a-factor export","type":"narrow"}],"termid":"GO:0000770","terms_by_termid":{"GO:0090539":null}}


id: PBO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 77","termid":"PBO:0042859"}


id: GO:0110010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins from a cell at the sides which interface adjacent cells and near the base.","definition_xrefs":["PMID:27404358","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"basolateral protein secretion","termid":"GO:0110010"}


id: GO:0032502
data:
  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id: PBO:0052716
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id: GO:0006096
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id: PBO:0088781
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id: MOD:00173
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id: PBO:0002834
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id: GO:0070707
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id: PBO:0072561
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id: PBO:0084635
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id: PBO:0066162
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id: PBO:0039642
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id: PBO:0011067
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id: GO:0002766
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id: PBO:0070184
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id: GO:0032722
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id: GO:0008809
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-carnitine = L-carnitine.","definition_xrefs":["MetaCyc:CARNRACE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"carnitine racemase activity","termid":"GO:0008809"}


id: PBO:0075178
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 8","termid":"PBO:0075178"}


id: PR:O59700
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["UniProtKB:O59700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: GO:1902136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(-)-secoisolariciresinol metabolic process","synonyms":[{"name":"(-)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902136"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: PBO:0074195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 5","termid":"PBO:0074195"}


id: PBO:0050481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A10","termid":"PBO:0050481"}


id: GO:1903162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any serine transmembrane transporter activity that is involved in serine import into cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity involved in serine import into cell (obsolete GO:1903162)","synonyms":[{"name":"serine transmembrane transporter activity involved in serine import into cell","type":"exact"}],"termid":"GO:1903162"}


id: GO:0018892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexylsulfamate, also known as cyclamic acid. Sodium cyclohexylsulfamate (CHS-Na) was a widely used sweetening agent but was banned because of the suspicion of carcinogenicity and metabolic conversion to cyclohexylamine (CHA), a toxic substance. It is now used as a fungicide.","definition_xrefs":["UM-BBD_pathwayID:chs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"cyclohexylsulfamate metabolic process","synonyms":[{"name":"cyclohexylsulfamate metabolism","type":"exact"},{"name":"cyclohexylsulphamate metabolic process","type":"exact"},{"name":"cyclohexylsulphamate metabolism","type":"exact"}],"termid":"GO:0018892"}


id: PR:Q9P332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.04c/SPAC977.02.","definition_xrefs":["UniProtKB:Q9P332","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C750.04c/C977.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.02","synonyms":[{"name":"Spom972h-SPAC977.02","type":"exact"}],"termid":"PR:Q9P332"}


id: FYPO:0000635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize leucine, and therefore requires leucine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for leucine","synonyms":[{"name":"growth auxotrophic for leucine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for leucine during vegetative growth","type":"exact"},{"name":"leucine auxotrophy","type":"exact"}],"termid":"FYPO:0000635"}


id: GO:0090393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a sepal giant cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"sepal giant cell differentiation","termid":"GO:0090392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal giant cell development","synonyms":[{"name":"sepal giant cell formation","type":"related"}],"termid":"GO:0090393"}


id: PBO:0005333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase","termid":"PBO:0005333"}


id: PBO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034443"}


id: GO:0070725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic part that appears as an electron-dense sphere of around 1.5 micron diameter containing Yb protein found in somatic cells of ovary and testis. There are one to two Yb bodies per cell.","definition_xrefs":["PMID:28595904","GOC:sart","PMID:19433453","PMID:31267711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Yb body","termid":"GO:0070725"}


id: FYPO:0000446
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"mitotic G2 phase arrest","type":"related"},{"name":"mitotic G2/M phase transition arrest","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic cell cycle progression at mitotic G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000446","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0055500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2934","termid":"PBO:0055500"}


id: PBO:0089258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit","termid":"PBO:0089258"}


id: GO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["ISBN:0878932585","GOC:dph","GOC:ef","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate development","termid":"GO:0001840"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: PBO:0084101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanylate kinase; converts GMP to GDP; required for growth and mannose outer chain elongation of cell wall N-linked glycoproteins","termid":"PBO:0084101"}


id: GO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + diphosphate = O-phospho-L-serine + H+ + phosphate.","definition_xrefs":["EC:2.7.1.80","RHEA:23764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"diphosphate-serine phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R00584","MetaCyc:2.7.1.80-RXN"],"synonyms":[{"name":"diphosphate:L-serine O-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--serine phosphotransferase activity","type":"related"},{"name":"pyrophosphate-L-serine phosphotransferase activity","type":"related"}],"termid":"GO:0047332"}


id: MOD:02064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine (Ser)","termid":"MOD:00202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-serine residue","synonyms":[{"name":"XlnkDSer","type":"exact"}],"termid":"MOD:02064"}


id: PBO:0062042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 12","termid":"PBO:0062042"}


id: PBO:0068130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 437","termid":"PBO:0068130"}


id: PBO:0039745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L domain containing 1","termid":"PBO:0039745"}


id: PBO:0078265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-3","termid":"PBO:0078265"}


id: GO:0033730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NADP+ = L-tyrosine + NADPH + CO2.","definition_xrefs":["EC:1.3.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arogenate dehydrogenase [NAD(P)+] activity","termid":"GO:0033731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arogenate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-5682","RHEA:15417"],"synonyms":[{"name":"L-arogenate:NADP+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"TyrAAT1","type":"related"},{"name":"TyrAAT2","type":"related"},{"name":"TyrAa","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033730"}


id: PBO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog (predicted)","termid":"PBO:0004086"}


id: GO:0008137
data:
  {"annotated_genes":["SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109372],"is_not":false,"summary":null,"term":"GO:0008137"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + ubiquinone + 5 H+(in) = NAD+ + ubiquinol + 4 H+(out).","definition_xrefs":["RHEA:29091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0005215","GO:0022857","GO:0003824"],"is_obsolete":false,"name":"NADH dehydrogenase (ubiquinone) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NADH-DEHYDROG-A-RXN","EC:7.1.1.2","Reactome:R-HSA-163217"],"synonyms":[{"name":"DPNH-coenzyme Q reductase activity","type":"related"},{"name":"DPNH-ubiquinone reductase activity","type":"related"},{"name":"NADH coenzyme Q1 reductase activity","type":"related"},{"name":"NADH-CoQ oxidoreductase activity","type":"related"},{"name":"NADH-CoQ reductase activity","type":"related"},{"name":"NADH-Q6 oxidoreductase activity","type":"related"},{"name":"NADH-coenzyme Q oxidoreductase activity","type":"related"},{"name":"NADH-coenzyme Q reductase activity","type":"related"},{"name":"NADH-ubiquinone oxidoreductase activity","type":"related"},{"name":"NADH-ubiquinone reductase activity","type":"related"},{"name":"NADH-ubiquinone-1 reductase activity","type":"related"},{"name":"NADH:ubiquinone oxidoreductase activity","type":"related"},{"name":"NADH:ubiquinone oxidoreductase complex activity","type":"related"},{"name":"coenzyme Q reductase activity","type":"related"},{"name":"complex 1 dehydrogenase activity","type":"related"},{"name":"complex I (NADH:Q1 oxidoreductase) activity","type":"related"},{"name":"complex I (electron transport chain) activity","type":"related"},{"name":"complex I (mitochondrial electron transport) activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-coenzyme Q reductase activity","type":"related"},{"name":"electron transfer complex I activity","type":"related"},{"name":"mitochondrial electron transport complex 1 activity","type":"narrow"},{"name":"mitochondrial electron transport complex I activity","type":"narrow"},{"name":"reduced nicotinamide adenine dinucleotide-coenzyme Q reductase activity","type":"related"},{"name":"type 1 dehydrogenase activity","type":"related"},{"name":"ubiquinone reductase activity","type":"exact"}],"termid":"GO:0008137","terms_by_termid":{"GO:0008137":null}}


id: GO:0014904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell development","termid":"GO:0055002"},{"relation_name":"part_of","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell development","termid":"GO:0014904"}


id: PBO:0110306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly ferredoxin Etp1/ heme O monooxygenase Cox15, fusion protein","termid":"PBO:0110306"}


id: PBO:0073064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 2","termid":"PBO:0073064"}


id: FYPO:0000027
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal cell wall during mitotic cell cycle","type":"related"},{"name":"cell wall defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000027","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0071121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor D.","definition_xrefs":["PMID:15590642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-D complex","synonyms":[{"name":"ITGA9-ITGB1-FIGF complex","type":"narrow"}],"termid":"GO:0071121"}


id: PBO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HGT1","termid":"PBO:0012016"}


id: GO:0035773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin, in response to a glucose stimulus.","definition_xrefs":["GOC:yaf","PMID:8492079","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin secretion","termid":"GO:0030073"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"cellular response to glucose stimulus","termid":"GO:0071333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0035773"}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89175],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: fecosterol = episterol.","definition_xrefs":["MetaCyc:RXN3O-203","PMID:8988026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:33435"],"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: PBO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 15","termid":"PBO:0062172"}


id: PBO:0050945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 17","termid":"PBO:0050945"}


id: MOD:01488
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532#Y","OMSSA:169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ114Y","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01488"}


id: PATO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellularity quality inhering in a bearer by virtue of the bearer's consisting of exactly one cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularity","termid":"PATO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unicellular","termid":"PATO:0001994"}


id: GO:0140496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gamma-tubulin complex.","definition_xrefs":["PMID:30174135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"gamma-tubulin complex binding","termid":"GO:0140496"}


id: FYPO:0001777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"short eisosome filament","synonyms":[{"name":"decreased eisosome filament length","type":"exact"},{"name":"short eisosome filament during mitotic cell cycle","type":"related"},{"name":"short eisosome filament during vegetative growth","type":"exact"},{"name":"short linear eisosomes","type":"exact"}],"termid":"FYPO:0001777"}


id: PBO:0090065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase specificity factor, predicted rRNA methyltransferase Mtf1","termid":"PBO:0090065"}


id: PBO:0114291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase, sterol related","termid":"PBO:0114291"}


id: GO:0021999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate anterior/posterior regionalization","synonyms":[{"name":"neural plate anterior/posterior pattern formation","type":"related"}],"termid":"GO:0021999"}


id: PBO:0110976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 6 (LAN blood group)","termid":"PBO:0110976"}


id: GO:0050421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitric oxide + H2O + ferricytochrome c = nitrite + ferrocytochrome c + 2 H+.","definition_xrefs":["EC:1.7.2.1","MetaCyc:NITRITE-REDUCTASE-CYTOCHROME-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrite reductase (NO-forming) activity","secondary_identifiers":["GO:0016666","RHEA:15233"],"synonyms":[{"name":"NO-forming nitrite reductase (cytochrome) activity","type":"exact"},{"name":"NO-forming nitrite reductase activity","type":"exact"},{"name":"[nitrite reductase (cytochrome)]","type":"related"},{"name":"cd-cytochrome nitrite reductase activity","type":"narrow"},{"name":"cytochrome c-551:O2, NO2(+) oxidoreductase activity","type":"related"},{"name":"cytochrome c-551:O2, NO2+ oxidoreductase activity","type":"related"},{"name":"cytochrome cd activity","type":"narrow"},{"name":"cytochrome cd1 activity","type":"narrow"},{"name":"methyl viologen-nitrite reductase activity","type":"narrow"},{"name":"nitric-oxide:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"nitrite reductase (cytochrome; NO-forming) activity","type":"related"}],"termid":"GO:0050421"}


id: PBO:0056870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICALL2 divergent transcript","termid":"PBO:0056870"}


id: PBO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin-associated protein Pds5","termid":"PBO:0001234"}


id: PBO:0111916
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus (SURF40 family)","termid":"PBO:0111916"}


id: GO:1900101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"regulation of ER unfolded protein response","type":"exact"},{"name":"regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"regulation of erUPR","type":"exact"}],"termid":"GO:1900101"}


id: PBO:0052939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 23-1","termid":"PBO:0052939"}


id: GO:0055087
data:
  {"annotated_genes":["SJAG_03805","SJAG_04118","SJAG_01218"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105350,112659,113733],"is_not":false,"summary":null,"term":"GO:0055087"}]},"cv_name":"cellular_component","definition":"A protein complex that regulates RNA degradation by the exosome complex. In Saccharomyces the complex has a heterotetrameric stoichiometry consisting of one copy each of Ski2p and Ski3 and two copies of Ski8p.","definition_xrefs":["PMID:16043509","PMID:18042677","PMID:15703439","GOC:mcc","PMID:10744028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01218":null,"SJAG_03805":null,"SJAG_04118":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Ski complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Ski_complex"],"termid":"GO:0055087","terms_by_termid":{"GO:0055087":null}}


id: PBO:0083690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE16 has a paralog, ADE17, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083690"}


id: FYPO:0000124
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01181:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01181","name":"pek1delta","uniquename":"SJAG_01181:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02342:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02342","name":"wis1delta","uniquename":"SJAG_02342:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03384:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03384","name":"wis4delta","uniquename":"SJAG_03384:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_03753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03753","name":"mkh1delta","uniquename":"SJAG_03753:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04777:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04777","name":"win1delta","uniquename":"SJAG_04777:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115685,115690,115692,115695,115697,115698,115699,115700,115701,115702,115703,115704,115705,115706],"is_not":false,"summary":null,"term":"FYPO:0000124"},{"annotations":[115945,115613,115610,115609],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"},{"annotations":[115676,115687,115681,115713],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115618,115611,115612],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115616,115617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"win1delta":{"display_name":"win1delta","display_uniquename":"win1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04777:allele-1","expression":"Null"}]}]},"wis1delta":{"display_name":"wis1delta","display_uniquename":"wis1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02342:allele-1","expression":"Null"}]}]},"wis4delta":{"display_name":"wis4delta","display_uniquename":"wis4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03384:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_03384","SJAG_02486","SJAG_03753","SJAG_04551","SJAG_02013","SJAG_04280","SJAG_04777","SJAG_02923","SJAG_02379","SJAG_01718","SJAG_04522","SJAG_03453","SJAG_04009","SJAG_03581","SJAG_01794","SJAG_00028","SJAG_01181","SJAG_02342","SJAG_00993","SJAG_03048","SJAG_00514","SJAG_02819"],"single_locus_genotype_uniquenames":["scd2delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","scd1delta","rga4delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","ste6delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","wis4delta","byr2delta","pmk1delta","win1delta","pek1delta","wis1delta","pyp1delta","rga6delta","ste11delta","mkh1delta","gef1delta","byr1delta","sty1delta","efc25delta","gap1delta","spk1delta"],"termid":"FYPO:0000124","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000124":null,"FYPO:0000648":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that contributes to sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular morphogenesis involved in pheromone-induced unidirectional conjugation (obsolete GO:0000764)","synonyms":[{"name":"cellular morphogenesis during pheromone-induced unidirectional","type":"related"},{"name":"cellular morphogenesis involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000764"}


id: GO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle formation","synonyms":[{"name":"mesonephros formation","type":"exact"}],"termid":"GO:0061262"}


id: PBO:0003598
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.5","termid":"PBO:0003598"}


id: PBO:0062901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase NAD binding domain containing 1","termid":"PBO:0062901"}


id: GO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland development","termid":"GO:0030878"}


id: GO:1990374
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A inward rectifier potassium channel complex. Homo- or heterotetramer composed of subunits of the eukaryotic Kir2 protein family. Plays a key role in maintaining the correct resting potential in eukaryotic cells.","definition_xrefs":["GOC:bhm","PMID:16834334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Kir2 inward rectifier potassium channel complex","synonyms":[{"name":"Kir2.1 complex","type":"narrow"}],"termid":"GO:1990374"}


id: PBO:0029555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_polynucleotide_3'-phosphatase_activity","termid":"PBO:0029555"}


id: PBO:0051885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITCH intronic transcript 1","termid":"PBO:0051885"}


id: SO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that is active in RNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_motif","termid":"SO:0000714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_motif","synonyms":[{"name":"RNA motif","type":"exact"}],"termid":"SO:0000715"}


id: FYPO:0004303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished phosphatase activity","synonyms":[{"name":"phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004303"}


id: PBO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex CUE domain protein, human ASCC2 ortholog Rqt3","termid":"PBO:0110074"}


id: PR:O94621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp109 gene.","definition_xrefs":["UniProtKB:O94621","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.12","synonyms":[{"name":"Spom972h-usp109","type":"exact"}],"termid":"PR:O94621"}


id: PBO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF6","termid":"PBO:0005804"}


id: GO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-glutamine + adenosylcob(III)yrinate a,c-diamide + 4 ATP + 4 H2O = 4 L-glutamate + adenosylcobyrate + 4 ADP + 8 H+ + 4 phosphate.","definition_xrefs":["EC:6.3.5.10","RHEA:23256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"adenosylcobyric acid synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R05225","MetaCyc:R345-RXN"],"synonyms":[{"name":"5'-deoxy-5'-adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase activity","type":"exact"},{"name":"Ado-cobyric acid synthase [glutamine hydrolyzing] activity","type":"exact"},{"name":"CobQ activity","type":"broad"},{"name":"adenosylcobyric acid synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"cobyric acid synthase activity","type":"related"}],"termid":"GO:0051921"}


id: GO:0045247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the cytosol containing flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"cytosolic electron transfer flavoprotein complex","termid":"GO:0045247"}


id: PATO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an ear.","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auriculate","termid":"PATO:0001981"}


id: PATO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flavor quality inhering in a bearer by virtue of the bearer's having an acrid, sharp, or disagreeable flavor.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavourful","termid":"PATO:0001329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bitter","termid":"PATO:0002474"}


id: PBO:0051007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 5","termid":"PBO:0051007"}


id: PBO:0005349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37 (predicted)","termid":"PBO:0005349"}


id: FYPO:0002352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule disassembly begins later than normal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule disassembly","termid":"FYPO:0002351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of stress granule disassembly","synonyms":[{"name":"delayed onset of cytoplasmic stress granule disassembly","type":"exact"},{"name":"delayed onset of stress granule disassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of stress granule disassembly during vegetative growth","type":"exact"},{"name":"delayed stress granule disassembly","type":"exact"}],"termid":"FYPO:0002352"}


id: GO:0007621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances.","definition_xrefs":["PMID:11092827","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity","synonyms":[{"name":"down regulation of female receptivity","type":"exact"},{"name":"down-regulation of female receptivity","type":"exact"},{"name":"downregulation of female receptivity","type":"exact"},{"name":"inhibition of female receptivity","type":"narrow"}],"termid":"GO:0007621"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["GOC:vw","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: GO:0048033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme O, a derivative of heme containing a 17-carbon hydroxyethylfarnesyl side chain at position 8 of the tetrapyrrole macrocycle.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme O metabolic process","synonyms":[{"name":"haem O metabolic process","type":"exact"},{"name":"haem O metabolism","type":"exact"},{"name":"heme O metabolism","type":"exact"}],"termid":"GO:0048033"}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: FYPO:0007912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial localization is normal.","definition_xrefs":["PMID:10641037","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal organelle localization","termid":"FYPO:0007913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal mitochondrial distribution","synonyms":[{"name":"normal mitochondrial localization","type":"exact"}],"termid":"FYPO:0007912"}


id: GO:2001158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine catabolic process","termid":"GO:0033243"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"positive regulation of proline metabolic process","termid":"GO:2000216"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"positively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of proline catabolic process to glutamate","synonyms":[{"name":"positive regulation of proline breakdown to glutamate","type":"exact"},{"name":"positive regulation of proline degradation to glutamate","type":"exact"},{"name":"positive regulation of proline oxidation","type":"related"}],"termid":"GO:2001158"}


id: PBO:0031303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical_during_vegetative_growth","termid":"PBO:0031303"}


id: GO:0070733
data:
  {"annotated_genes":["SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92559],"is_not":false,"summary":null,"term":"GO:0070733"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein = diphosphate + adenylyl-protein; mediates the addition of an adenylyl (adenosine 5'-monophosphate; AMP group) to L-serine, L-threonine, and L-tyrosine residues in target proteins.","definition_xrefs":["PMID:33947243","PMID:19039103","PMID:19362538","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"AMPylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.7.108"],"synonyms":[{"name":"AMPylator","type":"related"},{"name":"adenosine monophosphate-protein transferase activity","type":"exact"},{"name":"protein adenylyltransferase activity","type":"related"}],"termid":"GO:0070733","terms_by_termid":{"GO:0070733":null}}


id: PBO:0071868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 6","termid":"PBO:0071868"}


id: PBO:0069532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 801, pseudogene","termid":"PBO:0069532"}


id: GO:0046021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046021)","synonyms":[{"name":"mitotic regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of transcription from Pol II promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046021"}


id: GO:0016761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-glucose + ((1,4)-beta-D-glucosyl)(n) = GDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"cellulose synthase (GDP-forming) activity","secondary_identifiers":["RHEA:17797","MetaCyc:CELLULOSE-SYNTHASE-GDP-FORMING-RXN"],"synonyms":[{"name":"GDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"GDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"cellulose synthase (guanosine diphosphate-forming) activity","type":"related"},{"name":"guanosine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016761"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: GO:1905523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration.","definition_xrefs":["PMID:25749876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"positively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration","synonyms":[{"name":"activation of macrophage migration","type":"narrow"},{"name":"up regulation of macrophage migration","type":"exact"},{"name":"up-regulation of macrophage migration","type":"exact"},{"name":"upregulation of macrophage migration","type":"exact"}],"termid":"GO:1905523"}


id: PBO:0073367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 2","termid":"PBO:0073367"}


id: PBO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shk1 kinase binding protein 5","termid":"PBO:0005327"}


id: PBO:0058583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6716","termid":"PBO:0058583"}


id: GO:0099125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase complex comprising a conserved PAK/GC/Ste20 family kinase, leucine rich repeat protein Sog2 family, which function as part of the cell shape network.","definition_xrefs":["PMID:23462181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PAK family kinase-Sog2 complex","termid":"GO:0099125"}


id: MOD:01825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01825"}


id: FYPO:0006058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal during sporulation.","definition_xrefs":["PomBase:mah","GO:0042144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole fusion during sporulation","synonyms":[{"name":"abnormal homotypic vacuole fusion during sporulation","type":"exact"},{"name":"abnormal vacuole fusion, non-autophagic, during sporulation","type":"exact"}],"termid":"FYPO:0006058"}


id: PBO:0083069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region; forms nuclear foci upon DNA replication stress","termid":"PBO:0083069"}


id: FYPO:0000477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis","synonyms":[{"name":"delayed meiosis","type":"exact"},{"name":"delayed onset of meiotic nuclear division","type":"exact"},{"name":"meiosis: delayed","type":"related"}],"termid":"FYPO:0000477"}


id: PBO:0045372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamine biosynthesis 6","termid":"PBO:0045372"}


id: GO:0020010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spiral cytoskeletal structure located at the apical end of the apical complex in some apicomplexan parasites. Fibers form a left-handed spiral, and are comprised of tubulin protofilaments organized in a ribbon-like structure that differs from the conventional tubular structure characteristic of microtubules.","definition_xrefs":["GOC:expert_dr","PMID:11901169","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"conoid","termid":"GO:0020010"}


id: RO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has output","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"output_of","termid":"RO:0002353"}


id: PBO:0005058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDT malic acid transporter (predicted)","termid":"PBO:0005058"}


id: PBO:0072063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 1","termid":"PBO:0072063"}


id: PBO:0058250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4537","termid":"PBO:0058250"}


id: PBO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 28","termid":"PBO:0070657"}


id: PBO:0079749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L5","termid":"PBO:0079749"}


id: PBO:0045413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA4 pseudogene 2","termid":"PBO:0045413"}


id: PBO:0064999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 6","termid":"PBO:0064999"}


id: PBO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase, involved in iron-sulphur cluster assembly Tah18 (predicted)","termid":"PBO:0000556"}


id: PBO:0065016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2","termid":"PBO:0065016"}


id: GO:1900592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of violaceol II.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"violaceol II metabolic process","termid":"GO:1900591"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"violaceol II catabolic process","synonyms":[{"name":"violaceol II breakdown","type":"exact"},{"name":"violaceol II catabolism","type":"exact"},{"name":"violaceol II degradation","type":"exact"}],"termid":"GO:1900592"}


id: GO:0034942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienoic acid + ATP + CoASH = cis-2-methyl-5-isopropylhexa-2,5-dienoyl-CoA + AMP + PPi.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2-methyl-5-isopropylhexa-2,5-dienoate-CoA ligase activity (obsolete GO:0034942)","termid":"GO:0034942"}


id: PBO:0036349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"23S rRNA (adenine(1618)-N(6))-methyltransferase","termid":"PBO:0036349"}


id: PBO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf5-like","termid":"PBO:0004320"}


id: GO:0080043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 3-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"quercetin 3-O-glucosyltransferase activity","termid":"GO:0080043"}


id: PBO:0066892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 192","termid":"PBO:0066892"}


id: PBO:0040874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 2","termid":"PBO:0040874"}


id: GO:0106097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ceramide","termid":"GO:0106097"}


id: PBO:0068520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 115, pseudogene","termid":"PBO:0068520"}


id: GO:0062092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex that functions as an substrate-specific adaptor, linking the cytosolic iron-sulfur protein assembly (CIA) targeting complex to apo-Rli1p, an ABC protein involved in ribosome recycling, facilitating Fe-S cluster insertion and the maturation of the Rli1p.","definition_xrefs":["PMID:26182403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"Yae1-Lto1 complex","termid":"GO:0062092"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: GO:0000700
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of single bases present in mismatches by the cleavage the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140097","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000700","terms_by_termid":{"GO:0000701":null}}


id: GO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["UBERON:0002097","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin morphogenesis","termid":"GO:0043589"}


id: PBO:0072639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 3'-terminal phosphate cyclase","termid":"PBO:0072639"}


id: PBO:0004163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Mak5 (predicted)","termid":"PBO:0004163"}


id: PBO:0035693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of","termid":"PBO:0035693"}


id: PBO:0043596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL25A1 divergent transcript","termid":"PBO:0043596"}


id: PBO:0061056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 3B","termid":"PBO:0061056"}


id: PBO:0053090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2B","termid":"PBO:0053090"}


id: PBO:0040370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 7","termid":"PBO:0040370"}


id: PR:O74510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt3 gene.","definition_xrefs":["UniProtKB:O74510","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.07c","synonyms":[{"name":"Spom972h-bqt3","type":"exact"}],"termid":"PR:O74510"}


id: PBO:0053293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMK2 pseudogene 1","termid":"PBO:0053293"}


id: PBO:0042225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNT2 antisense RNA 1","termid":"PBO:0042225"}


id: FYPO:0000792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glycerol dehydrogenase activity","termid":"FYPO:0000792"}


id: PBO:0013817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A4","termid":"PBO:0013817"}


id: PBO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1 (predicted)","termid":"PBO:0002004"}


id: PBO:0067830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 132","termid":"PBO:0067830"}


id: PBO:0041587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 2","termid":"PBO:0041587"}


id: GO:0072581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of an N6-(lysyl)-L-lysine residue in a protein, producing protein-N6-(beta-lysyl)-L-lysine ((2S)-2-amino-6-([(2S)-2,6-diaminohexanoyl]amino)hexanoic acid). This modification is observed in, and is probably unique to, translation elongation factor P (EF-P).","definition_xrefs":["GOC:jsg","PMID:20729861","RESID:AA0531","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine (obsolete GO:0072581)","termid":"GO:0072581"}


id: FYPO:0000181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which reciprocal DNA recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished crossover","synonyms":[{"name":"DNA recombination defects, crossover, abolished","type":"exact"},{"name":"abolished crossover during mitotic cell cycle","type":"related"},{"name":"crossover abolished","type":"exact"},{"name":"crossover abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000181"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71860,77389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: PBO:0060717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA6 divergent transcript","termid":"PBO:0060717"}


id: FYPO:0000533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"decreased mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000532"},{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000257","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"normal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"normal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: normal","type":"related"}],"termid":"FYPO:0000533"}


id: GO:0018669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + H+ + NADH + O2 = 2,5-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["EC:1.14.13.24","RHEA:22692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxybenzoate 6-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0402","KEGG_REACTION:R02589","MetaCyc:3-HYDROXYBENZOATE-6-MONOOXYGENASE-RXN"],"synonyms":[{"name":"3-hydroxybenzoate 6-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,NADH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"3-hydroxybenzoic acid-6-hydroxylase activity","type":"related"},{"name":"m-hydroxybenzoate 6-hydroxylase activity","type":"related"}],"termid":"GO:0018669"}


id: PBO:0053866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1141","termid":"PBO:0053866"}


id: GO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor nuclear translocator activity (obsolete GO:0005061)","synonyms":[{"name":"aryl hydrocarbon receptor nuclear translocator activity","type":"exact"}],"termid":"GO:0005061"}


id: PBO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex assembly protein Cbp6 (predicted)","termid":"PBO:0003282"}


id: GO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:jid","UBERON:0002048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung development","termid":"GO:0030324"}


id: PBO:0067152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 202, pseudogene","termid":"PBO:0067152"}


id: PBO:0029405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029405"}


id: PR:Q6BDR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse4 gene.","definition_xrefs":["UniProtKB:Q6BDR8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.04c","synonyms":[{"name":"DNA repair protein rad62 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nse4","type":"exact"},{"name":"non-SMC element 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q6BDR8"}


id: PBO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Win1","termid":"PBO:0002840"}


id: GO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the late distal convoluted tubule over time, from its formation to the mature structure. The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late distal convoluted tubule development","termid":"GO:0072068"}


id: PBO:0061995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily E member 1 pseudogene","termid":"PBO:0061995"}


id: PBO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase","termid":"PBO:0090228"}


id: PR:P52808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.03c","synonyms":[{"name":"L32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3001","type":"exact"}],"termid":"PR:P52808"}


id: PR:O74361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C28E12.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.04","synonyms":[{"name":"Spom972h-SPBC28E12.04","type":"exact"}],"termid":"PR:O74361"}


id: GO:0034093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"is_a","term_name":"positive regulation of sister chromatid cohesion","termid":"GO:0045876"},{"relation_name":"positively_regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"}


id: PBO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF (predicted)","termid":"PBO:0002932"}


id: PBO:0013034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (unnamed)","termid":"PBO:0013034"}


id: PBO:0087295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease; cleaves single-stranded DNA during nucleotide excision repair to excise damaged DNA; subunit of Nucleotide Excision Repair Factor 3 (NEF3); homolog of human XPG protein","termid":"PBO:0087295"}


id: FYPO:0006955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular glutamine level","synonyms":[{"name":"increased cellular L-glutamine level","type":"exact"},{"name":"increased cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamine level during vegetative growth","type":"exact"},{"name":"increased glutamine accumulation","type":"related"}],"termid":"FYPO:0006955"}


id: PBO:0071187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 28","termid":"PBO:0071187"}


id: GO:0070915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the phospholipid derivative lysophosphatidic acid, and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:mah","GOC:bf","PMID:15755723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bioactive lipid receptor activity","termid":"GO:0045125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lysophosphatidic acid receptor activity","synonyms":[{"name":"LPA receptor activity","type":"exact"}],"termid":"GO:0070915"}


id: GO:0102189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102189)","secondary_identifiers":["MetaCyc:RXN-11957"],"termid":"GO:0102189"}


id: PBO:0036432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal and vacuolar ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0036432"}


id: GO:1904679
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89147,94612],"is_not":false,"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:9560432","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"myo-inositol transport","termid":"GO:0015798"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"myo-inositol import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097357"],"synonyms":[{"name":"myo-inositol import into cell","type":"exact"}],"termid":"GO:1904679","terms_by_termid":{"GO:1904679":null}}


id: PBO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4-Dependent Expression","termid":"PBO:0004655"}


id: PBO:0068888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 129, pseudogene","termid":"PBO:0068888"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: PBO:0040852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S5-TXNDC5 readthrough (NMD candidate)","termid":"PBO:0040852"}


id: PBO:0086397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytosolic protein of unknown function","termid":"PBO:0086397"}


id: PBO:0057664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1255b-2","termid":"PBO:0057664"}


id: GO:0150128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["PMID:29778524","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"negatively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-33 production","secondary_identifiers":["GO:0150131","GO:0150124"],"synonyms":[{"name":"negative regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150128"}


