# terms

id: SO:0001329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_2_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:034"],"synonyms":[{"name":"N2 2 prime O dimethylguanosine","type":"exact"},{"name":"N2,2'-O-dimethylguanosine","type":"exact"},{"name":"m2Gm","type":"exact"}],"termid":"SO:0001329"}


id: PBO:0030135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zinc_starvation","termid":"PBO:0030135"}


id: PBO:0111691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 QL1","termid":"PBO:0111691"}


id: GO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine.","definition_xrefs":["PMID:19366698"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidyl-N-dimethylethanolamine N-methyltransferase activity (obsolete GO:0080101)","termid":"GO:0080101"}


id: PBO:0028780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_shortening_telomeres","termid":"PBO:0028780"}


id: GO:1901105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetracenomycin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00174","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"tetracenomycin C metabolic process","termid":"GO:1901104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetracenomycin C catabolic process","synonyms":[{"name":"tetracenomycin C breakdown","type":"exact"},{"name":"tetracenomycin C catabolism","type":"exact"},{"name":"tetracenomycin C degradation","type":"exact"}],"termid":"GO:1901105"}


id: PBO:0058669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6797","termid":"PBO:0058669"}


id: PBO:0091593
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.5142627_5142628insG","termid":"PBO:0091593"}


id: PBO:0041658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 3","termid":"PBO:0041658"}


id: PBO:0090279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit Gcn3","termid":"PBO:0090279"}


id: GO:0044586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellotetraose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellotetraose binding","termid":"GO:0044586"}


id: GO:1900305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"positively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of laminaritriose transport","synonyms":[{"name":"activation of laminaritriose transport","type":"narrow"},{"name":"up regulation of laminaritriose transport","type":"exact"},{"name":"up-regulation of laminaritriose transport","type":"exact"},{"name":"upregulation of laminaritriose transport","type":"exact"}],"termid":"GO:1900305"}


id: GO:1903596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:TermGenie","PMID:25017399","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of gap junction assembly","termid":"GO:1903596"}


id: PBO:0065875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 3","termid":"PBO:0065875"}


id: PBO:0076537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 64 pseudogene","termid":"PBO:0076537"}


id: GO:0051558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene metabolic process","synonyms":[{"name":"phlobaphene metabolism","type":"exact"}],"termid":"GO:0051558"}


id: PBO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_of_cell_population_growth","termid":"PBO:0030382"}


id: MOD:01369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl methyl ester group.","definition_xrefs":["Unimod:528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated and methyl esterified residue","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01369"}


id: PBO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marginal zone B and B1 cell specific protein","termid":"PBO:0060387"}


id: GO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.","definition_xrefs":["PMID:17113380","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pole plasm","synonyms":[{"name":"germ plasm","type":"narrow"},{"name":"polar plasm","type":"exact"}],"termid":"GO:0045495"}


id: PBO:0005796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation (predicted)","termid":"PBO:0005796"}


id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: FYPO:0006377
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to ER","type":"exact"}],"termid":"FYPO:0006377","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0088698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family plus-end directed microtubule motor Tea2","termid":"PBO:0088698"}


id: MOD:01090
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that by reaction of iodoacetamide effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a carboxamidomethyl group.","definition_xrefs":["Unimod:4#N-term","PubMed:11327326","PubMed:11510821","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized amino-terminal residue","synonyms":[{"name":"(carbamoylmethyl)amino","type":"exact"},{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:01090"}


id: GO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:krc","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition, DNA-mediated (obsolete GO:0000335)","synonyms":[{"name":"down regulation of DNA transposition","type":"exact"},{"name":"down-regulation of DNA transposition","type":"exact"},{"name":"downregulation of DNA transposition","type":"exact"},{"name":"inhibition of DNA transposition","type":"narrow"},{"name":"negative regulation of DNA transposition","type":"exact"}],"termid":"GO:0000335"}


id: PBO:0081997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 30","termid":"PBO:0081997"}


id: GO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 sucrose = D-glucose + 1F-beta-D-fructosylsucrose.","definition_xrefs":["EC:2.4.1.99","MetaCyc:SUCROSE-1F-FRUCTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"sucrose 1F-fructosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1781","RHEA:23312"],"synonyms":[{"name":"SST activity","type":"related"},{"name":"sucrose 1(F)-fructosyltransferase activity","type":"related"},{"name":"sucrose-sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1'-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose fructosyltransferase activity","type":"related"}],"termid":"GO:0050306"}


id: PBO:0028871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_tail_length","termid":"PBO:0028871"}


id: FYPO:0005473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate synthase (NADH) activity","synonyms":[{"name":"normal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"normal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"normal NADH: GOGAT activity","type":"related"},{"name":"normal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005473"}


id: GO:0033851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dimethylallyl diphosphate = diphosphate + lavandulyl diphosphate.","definition_xrefs":["RHEA:21676","EC:2.5.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lavandulyl diphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R08950","MetaCyc:2.5.1.69-RXN"],"synonyms":[{"name":"FDS-5","type":"related"},{"name":"dimethylallyl-diphosphate:dimethylallyl-diphosphate dimethylallyltransferase (lavandulyl-diphosphate-forming) activity","type":"related"}],"termid":"GO:0033851"}


id: PBO:0080890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F1","termid":"PBO:0080890"}


id: FYPO:0002122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transporter activity","termid":"FYPO:0002118"},{"relation_name":"is_a","term_name":"abnormal sodium:hydrogen antiporter activity","termid":"FYPO:0002121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000652","FYPO:0000707","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased sodium:hydrogen antiporter activity","synonyms":[{"name":"reduced sodium:hydrogen antiporter activity","type":"exact"}],"termid":"FYPO:0002122"}


id: FYPO:0001393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal activation of monopolar cell growth","synonyms":[{"name":"abnormal regulation of monopolar vegetative cell growth","type":"related"}],"termid":"FYPO:0001393"}


id: GO:0070476
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91470],"is_not":false,"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"is_a","term_name":"rRNA base methylation","termid":"GO:0070475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"rRNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070476","terms_by_termid":{"GO:0070476":null}}


id: PBO:0091427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase","termid":"PBO:0091427"}


id: SO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adaptive island is a genomic island that provides an adaptive advantage to the host.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptive_island","synonyms":[{"name":"adaptive island","type":"exact"}],"termid":"SO:0000775"}


id: GO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl (2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate + H2O = (2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate + methanol. A carboxylesterase that hydrolyzes the ester linkage of juvenile hormone.","definition_xrefs":["RHEA:16393","PMID:11267890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"juvenile-hormone esterase activity","secondary_identifiers":["EC:3.1.1.59","MetaCyc:JUVENILE-HORMONE-ESTERASE-RXN"],"synonyms":[{"name":"JH esterase activity","type":"related"},{"name":"JH-esterase activity","type":"related"},{"name":"juvenile hormone analog esterase activity","type":"related"},{"name":"juvenile hormone carboxyesterase activity","type":"related"},{"name":"methyl-(2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate acylhydrolase activity","type":"related"}],"termid":"GO:0004453"}


id: PBO:0039800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiregulin","termid":"PBO:0039800"}


id: PBO:0060744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B1","termid":"PBO:0060744"}


id: PBO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4","termid":"PBO:0047784"}


id: PBO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah3","termid":"PBO:0005295"}


id: GO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIa cytochrome c (obsolete GO:0009470)","synonyms":[{"name":"class IIa cytochrome c","type":"exact"}],"termid":"GO:0009470"}


id: GO:1901972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901972)","synonyms":[{"name":"activation of DNA-5-methylcytosine glycosylase activity","type":"narrow"},{"name":"up regulation of DNA-5-methylcytosine glycosylase activity","type":"exact"},{"name":"up-regulation of DNA-5-methylcytosine glycosylase activity","type":"exact"},{"name":"upregulation of DNA-5-methylcytosine glycosylase activity","type":"exact"}],"termid":"GO:1901972"}


id: PBO:0048982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 8","termid":"PBO:0048982"}


id: GO:0008917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lipopolysaccharide = UDP + N-acetyl-D-glucosaminyl-lipopolysaccharide.","definition_xrefs":["EC:2.4.1.56","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lipopolysaccharide N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-22502"],"synonyms":[{"name":"LPS N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"UDP-N-acetyl-D-glucosamine:lipopolysaccharide N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-lipopolysaccharide N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-lipopolysaccharide acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0008917"}


id: GO:2001155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"negatively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of glycolytic fermentation to ethanol","synonyms":[{"name":"negative regulation of ethanol fermentation","type":"exact"},{"name":"negative regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001155"}


id: PBO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 like 1, pseudogene","termid":"PBO:0042275"}


id: PBO:0028504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphodiesterase_I_activity","termid":"PBO:0028504"}


id: GO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor production","termid":"GO:0010575"}


id: PBO:0065866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB23, member RAS oncogene family","termid":"PBO:0065866"}


id: PBO:0027529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_and_rapamycin","termid":"PBO:0027529"}


id: PBO:0075921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 13","termid":"PBO:0075921"}


id: GO:0022416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a chaeta over time, from its formation to the mature structure. A chaeta is a sensory multicellular cuticular outgrowth of a specifically differentiated cell.","definition_xrefs":["GOC:isa_complete","GOC:dos","FBbt:00005177","GOC:cjm","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaeta development","synonyms":[{"name":"bristle development","type":"narrow"}],"termid":"GO:0022416"}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95335,107234,107240],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["GOC:hjd","PMID:10854427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: GO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cobalt-factor II = S-adenosyl-L-homocysteine + cobalt-factor III.","definition_xrefs":["EC:2.1.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"cobalt-factor II C20-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8760","RHEA:17997"],"synonyms":[{"name":"CbiL","type":"narrow"},{"name":"S-adenosyl-L-methionine:cobalt-factor-II C20-methyltransferase activity","type":"related"},{"name":"cobalt-factor II C20 methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-2 C(20)-methyltransferase activity","type":"related"}],"termid":"GO:0043781"}


id: GO:1990371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to phenol.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to phenol (obsolete GO:1990371)","termid":"GO:1990371"}


id: PR:Q9URY9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.06c gene.","definition_xrefs":["UniProtKB:Q9URY9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hemerythrin-like protein C869.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.06c","synonyms":[{"name":"Spom972h-SPAC869.06c","type":"exact"}],"termid":"PR:Q9URY9"}


id: GO:0000823
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95371],"is_not":false,"summary":null,"term":"GO:0000823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:17717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 6-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R05800","MetaCyc:2.7.1.151-RXN"],"synonyms":[{"name":"IpmK","type":"broad"},{"name":"inositol polyphosphate multikinase activity","type":"broad"},{"name":"inositol trisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000823","terms_by_termid":{"GO:0000823":null}}


id: MOD:00822
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-leucine residue and an L-cysteine residue by a thioester bond to form S-(L-leucyl)-L-cysteine.","definition_xrefs":["PubMed:12591958","RESID:AA0412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-leucine residue","termid":"MOD:02050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-leucyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-methylpentanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Leucyl cysteine thioester (Cys-Leu)","type":"exact"},{"name":"S-(2-amino-4-methylpentanoyl)cysteine","type":"exact"},{"name":"S-(L-leucyl)-L-cysteine","type":"exact"},{"name":"XLNK1LeuSCys","type":"exact"},{"name":"leucine cysteine thioester","type":"exact"}],"termid":"MOD:00822"}


id: PBO:0074181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 3","termid":"PBO:0074181"}


id: PBO:0036450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER delivery of tail-anchored membrane proteins (predicted)","termid":"PBO:0036450"}


id: PBO:0068086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 392","termid":"PBO:0068086"}


id: PATO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being convex on both sides or surface.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/biconvexity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex","termid":"PATO:0001355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconvex","secondary_identifiers":["Image:http\\://www.thefreedictionary.com/_/viewer.aspx?path=hm&name=A4bicovx"],"termid":"PATO:0002040"}


id: PBO:0045868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 1","termid":"PBO:0045868"}


id: PBO:0049725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 3","termid":"PBO:0049725"}


id: GO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sodium ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular sodium ion homeostasis","synonyms":[{"name":"cellular sodium ion homeostasis","type":"exact"}],"termid":"GO:0006883"}


id: GO:0002143
data:
  {"annotated_genes":["SJAG_03616","SJAG_04113","SJAG_00358","SJAG_03932","SJAG_03896","SJAG_00186","SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92558,102387,103411,104938,113704],"is_not":false,"summary":null,"term":"GO:0002143"},{"annotations":[113468,90839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine residue at position 34 in the anticodon of a tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.","definition_xrefs":["PMID:16871210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"},{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01302":null,"SJAG_03616":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble position uridine thiolation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA wobble uridine thiolation","type":"exact"},{"name":"wobble position s2U biosynthesis","type":"exact"}],"termid":"GO:0002143","terms_by_termid":{"GO:0002143":null,"GO:1990799":null}}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: GO:0051354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidoreductase activity","synonyms":[{"name":"down regulation of oxidoreductase activity","type":"exact"},{"name":"down-regulation of oxidoreductase activity","type":"exact"},{"name":"downregulation of oxidoreductase activity","type":"exact"},{"name":"inhibition of oxidoreductase activity","type":"narrow"},{"name":"oxidoreductase inhibitor","type":"exact"}],"termid":"GO:0051354"}


id: PBO:0028737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hercynylselenocysteine_absent_from_cell","termid":"PBO:0028737"}


id: PBO:0090645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1","termid":"PBO:0090645"}


id: SO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tryptophanyl tRNA (SO:000271).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan_tRNA_primary_transcript","synonyms":[{"name":"tryptophan tRNA primary transcript","type":"exact"}],"termid":"SO:0000228"}


id: FYPO:0007927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to dihydrocoumarin. Cells stop growing (and may die) at a concentration of dihydrocoumarin that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to dihydrocoumarin","synonyms":[{"name":"sensitive to dihydrocoumarin during vegetative growth","type":"exact"}],"termid":"FYPO:0007927"}


id: PBO:0110369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L3","termid":"PBO:0110369"}


id: GO:0021728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior reticular formation development","termid":"GO:0021728"}


id: PR:O94611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 65 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.04","synonyms":[{"name":"Spom972h-mug65","type":"exact"}],"termid":"PR:O94611"}


id: PBO:0039068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylglycerol monooxygenase","termid":"PBO:0039068"}


id: PBO:0058751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6875","termid":"PBO:0058751"}


id: GO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes.","definition_xrefs":["PMID:21421911","ISBN:0721639976","PMID:19693541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type IV trimer","secondary_identifiers":["Wikipedia:Collagen_type_IV"],"termid":"GO:0005587"}


id: PBO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 6 pseudogene","termid":"PBO:0062059"}


id: PBO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein sap61","termid":"PBO:0003365"}


id: PBO:0004280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22 (predicted)","termid":"PBO:0004280"}


id: PBO:0072572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory subunit M2","termid":"PBO:0072572"}


id: GO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxoadipate enol-lactone + H2O = 3-oxoadipate.","definition_xrefs":["EC:3.1.1.24","MetaCyc:3-OXOADIPATE-ENOL-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3-oxoadipate enol-lactonase activity","secondary_identifiers":["RHEA:10184"],"synonyms":[{"name":"3-ketoadipate enol-lactonase activity","type":"related"},{"name":"3-oxoadipic enol-lactone hydrolase activity","type":"related"},{"name":"4-carboxymethylbut-3-en-4-olide enol-lactonohydrolase activity","type":"related"},{"name":"beta-ketoadipate enol-lactone hydrolase activity","type":"related"},{"name":"beta-ketoadipic enol-lactone hydrolase activity","type":"related"},{"name":"carboxymethylbutenolide lactonase activity","type":"related"}],"termid":"GO:0047570"}


id: PBO:0072696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUSC1 antisense RNA 1","termid":"PBO:0072696"}


id: PBO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETV5 antisense RNA 1","termid":"PBO:0046707"}


id: PBO:0045757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1 pseudogene 1","termid":"PBO:0045757"}


id: GO:0097184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.","definition_xrefs":["PMID:16846222","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to azide","termid":"GO:0097184"}


id: PBO:0041856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3 pseudogene 1","termid":"PBO:0041856"}


id: PBO:0078369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 13-1","termid":"PBO:0078369"}


id: GO:0120172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament bundle convergence involved in mitotic contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:0120172)","termid":"GO:0120172"}


id: GO:0070875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"positively_regulates","term_name":"glycogen metabolic process","termid":"GO:0005977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glycogen metabolic process","synonyms":[{"name":"positive regulation of glycogen metabolism","type":"exact"}],"termid":"GO:0070875"}


id: PBO:0084372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipoate-protein ligase; octanoyl-CoA: protein transferase required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0084372"}


id: PBO:0085967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; may have a role in telomere maintenance; target of UME6 regulation","termid":"PBO:0085967"}


id: PBO:0110499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 pseudogene 2","termid":"PBO:0110499"}


id: GO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during action potential","termid":"GO:0086010"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}


id: GO:0036112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving medium-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"medium-chain fatty-acyl-CoA metabolic process","synonyms":[{"name":"medium-chain fatty acyl CoA metabolic process","type":"exact"},{"name":"medium-chain fatty acyl-CoA metabolism","type":"exact"}],"termid":"GO:0036112"}


id: GO:0031996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thioesterase.","definition_xrefs":["GOC:dl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thioesterase binding","synonyms":[{"name":"thiolesterase binding","type":"exact"}],"termid":"GO:0031996"}


id: PBO:0113045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin remodeler that regulates various aspects of transcription; acts in conjunction with Isw1b to regulate chromatin structure, maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains chromo domain, helicase domain and DNA-binding domain; component of both SAGA and SLIK complexes; in human, deletion of CHD1 is a frequent event in prostate cancer","termid":"PBO:0113045"}


id: MOD:02001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a stearoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"stearoylated residue","termid":"MOD:02001"}


id: PBO:0029874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation","termid":"PBO:0029874"}


id: GO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K5 acetylation (obsolete GO:0043977)","synonyms":[{"name":"histone H2A acetylation at K5","type":"exact"}],"termid":"GO:0043977"}


id: GO:0015537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: xanthosine(out) + H+(out) = xanthosine(in) + H+(in).","definition_xrefs":["TC:2.A.1.10.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside:proton symporter activity","termid":"GO:0015506"},{"relation_name":"is_a","term_name":"xanthosine transmembrane transporter activity","termid":"GO:0015553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"xanthosine:proton symporter activity","synonyms":[{"name":"xanthosine permease activity","type":"related"},{"name":"xanthosine:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015537"}


id: GO:0032067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA in a site specific manner. Cleavage is dependent on the presence of a specific recognition site in the DNA which must be modified (e.g. methylated, hydroxymethylated, glucosyl-hydroxymethylated).","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"type IV site-specific deoxyribonuclease activity","synonyms":[{"name":"type IV restriction enzyme activity","type":"exact"}],"termid":"GO:0032067"}


id: PBO:0040167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASMTL antisense RNA 1","termid":"PBO:0040167"}


id: PBO:0066489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A like 1","termid":"PBO:0066489"}


id: PBO:0028091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_glucose_starvation","termid":"PBO:0028091"}


id: PBO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIC subunit Sfc7 (predicted)","termid":"PBO:0002843"}


id: GO:0032530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"microvillus organization","termid":"GO:0032528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microvillus organization","synonyms":[{"name":"regulation of microvillus organisation","type":"exact"},{"name":"regulation of microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032530"}


id: PBO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_prospore_membrane_formation","termid":"PBO:0036219"}


id: GO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches are generated and organized. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a branching structure","synonyms":[{"name":"branching morphogenesis","type":"exact"}],"termid":"GO:0001763"}


id: PBO:0056024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 2","termid":"PBO:0056024"}


id: PR:O74542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.03c gene.","definition_xrefs":["UniProtKB:O74542","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C777.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.03c","synonyms":[{"name":"Spom972h-SPCC777.03c","type":"exact"}],"termid":"PR:O74542"}


id: PBO:0039183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 13","termid":"PBO:0039183"}


id: PR:P87230
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04325","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.04c","secondary_identifiers":["UniProtKB:P87230"],"synonyms":[{"name":"Spom972h-COQ5","type":"exact"},{"name":"ubiquinone biosynthesis methyltransferase COQ5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87230"}


id: GO:0051550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aurones, a series of plant flavonoids that provide a yellow colour to flowers. They have the basic skeletal structure of two benzene rings joined by a linear C3 chain (C6-C3-C6). Aurones exist mostly as 6-O-glucosides.","definition_xrefs":["PMID:20035037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aurone metabolic process","synonyms":[{"name":"aurone metabolism","type":"exact"},{"name":"benzalcoumaran-3-one metabolic process","type":"exact"},{"name":"benzalcoumaran-3-one metabolism","type":"exact"}],"termid":"GO:0051550"}


id: PBO:0079828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 3","termid":"PBO:0079828"}


id: GO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in response to nonself antigens.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to nonself antigen","termid":"GO:0002462"}


id: GO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"TDP catabolic process","synonyms":[{"name":"TDP breakdown","type":"exact"},{"name":"TDP catabolism","type":"exact"},{"name":"TDP degradation","type":"exact"}],"termid":"GO:0006245"}


id: null:chado_properties:version
data:
  {"annotation_feature_type":"gene","cv_name":"chado_properties","definition":"Chado schema version","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"version","termid":"null:chado_properties:version"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: PBO:0078115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 4","termid":"PBO:0078115"}


id: GO:0019643
data:
  {"annotated_genes":["SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113268],"is_not":false,"summary":null,"term":"GO:0019643"}]},"cv_name":"biological_process","definition":"A pathway leading to the fixation of two molecules of CO2 and the production of one molecule of acetyl-CoA; essentially the oxidative TCA cycle running in reverse. Acetyl-CoA is reductively carboxylated to pyruvate, from which all other central metabolites can be formed. Most of the enzymes of reductive and oxidative TCA cycle are shared, with the exception of three key enzymes that allow the cycle to run in reverse: ATP citrate lyase, 2-oxoglutarate:ferredoxin oxidoreductase, and fumarate reductase. 2-oxoglutarate:ferredoxin oxidoreductase catalyzes the carboxylation of succinyl-CoA to 2-oxoglutarate, ATP citrate lyase the ATP-dependent cleavage of citrate to acetyl-CoA and oxaloacetate, and fumarate reductase the reduction of fumarate forming succinate.","definition_xrefs":["PMID:15838028","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reductive tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019644"],"synonyms":[{"name":"reductive Kreb's cycle","type":"exact"},{"name":"reductive TCA cycle","type":"exact"},{"name":"reductive carboxylate cycle","type":"exact"},{"name":"reductive carboxylic acid cycle","type":"exact"},{"name":"reductive citric acid pathway","type":"exact"}],"termid":"GO:0019643","terms_by_termid":{"GO:0019643":null}}


id: PBO:0011477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8","termid":"PBO:0011477"}


id: PBO:0039162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6 pseudogene 1","termid":"PBO:0039162"}


id: PBO:0081467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF337 antisense RNA 1","termid":"PBO:0081467"}


id: PBO:0050145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 1","termid":"PBO:0050145"}


id: PBO:0050968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 2","termid":"PBO:0050968"}


id: GO:0097522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed through interaction of the protein(s) with an interferon-stimulated response element (ISRE) in the DNA.","definition_xrefs":["GOC:amm","GOC:cjm","PMID:11747630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-DNA ISRE complex","termid":"GO:0097522"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12172:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: GO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a fungal-type vacuole membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of fungal-type vacuolar membrane (obsolete GO:0071628)","termid":"GO:0071628"}


id: PBO:0071515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 18","termid":"PBO:0071515"}


id: PBO:0056884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 4","termid":"PBO:0056884"}


id: PBO:0109992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF181 like, unknown biological role","termid":"PBO:0109992"}


id: GO:0044432
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endoplasmic reticulum part (obsolete GO:0044432)","synonyms":[{"name":"ER component","type":"exact"}],"termid":"GO:0044432"}


id: PBO:0108750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex I'' complex ING family homolog Png3","termid":"PBO:0108750"}


id: GO:0036336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell within or between different tissues and organs of the body.","definition_xrefs":["PMID:19339990","CL:0000451","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell migration","termid":"GO:0036336"}


id: PBO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lyase deficiency","termid":"PBO:0025512"}


id: MOD:01720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01720"}


id: GO:1902407
data:
  {"annotated_genes":["SJAG_04982","SJAG_00228","SJAG_01732","SJAG_04887","SJAG_04703","SJAG_03045","SJAG_00268","SJAG_01894","SJAG_02700","SJAG_04077","SJAG_03025","SJAG_00279","SJAG_03703","SJAG_00082","SJAG_01143","SJAG_02431","SJAG_04930","SJAG_04597","SJAG_02592","SJAG_03596","SJAG_04498","SJAG_03048","SJAG_00700","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84849,94597,91857,95468,89163,108395,114962,113543,115141,116121,108823,114383,94291,94216,98973,97816,99113,94490,89115,88902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98917],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90984,86583],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[115644,90950,90379],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any assembly of mitotic cytokinetic actomyosin apparatus.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085","GO:0000281"],"is_obsolete":false,"name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin apparatus assembly involved in cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, formation of actomyosin apparatus involved in mitotic cell cycle","type":"exact"},{"name":"formation of actomyosin apparatus involved in cytokinesis involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902407","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: GO:0047111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferricytochrome C-553 + formate = ferrocytochrome C-553 + CO2.","definition_xrefs":["MetaCyc:1.2.2.3-RXN","EC:1.17.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome-c-553) activity","secondary_identifiers":["RHEA:15189"],"synonyms":[{"name":"formate dehydrogenase (cytochrome c-553)","type":"related"},{"name":"formate:ferricytochrome-c-553 oxidoreductase activity","type":"related"}],"termid":"GO:0047111"}


id: PBO:0044028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 2","termid":"PBO:0044028"}


id: PATO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optical quality","termid":"PATO:0001300"}


id: PBO:0067045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 65, pseudogene","termid":"PBO:0067045"}


id: FYECO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which terconazol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ terconazole","termid":"FYECO:0000351"}


id: PBO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8 (predicted)","termid":"PBO:0000572"}


id: PBO:0109089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 3","termid":"PBO:0109089"}


id: PBO:0052008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional cadherin complex regulator","termid":"PBO:0052008"}


id: PBO:0061085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 3","termid":"PBO:0061085"}


id: PBO:0070391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROR1 antisense RNA 1","termid":"PBO:0070391"}


id: PBO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Isp3","termid":"PBO:0016883"}


id: GO:0070370
data:
  {"annotated_genes":["SJAG_04187","SJAG_03527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100751,100863],"is_not":false,"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of a cell in response to high temperatures.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat acclimation","termid":"GO:0010286"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular thermotolerance","type":"exact"}],"termid":"GO:0070370","terms_by_termid":{"GO:0070370":null}}


id: PBO:0089362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase","termid":"PBO:0089362"}


id: PBO:0043917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal neoplasia differentially expressed","termid":"PBO:0043917"}


id: PBO:0056405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 3","termid":"PBO:0056405"}


id: PBO:0077048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 3","termid":"PBO:0077048"}


id: GO:0008161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamate resistance (obsolete GO:0008161)","synonyms":[{"name":"carbamate resistance","type":"exact"}],"termid":"GO:0008161"}


id: PR:O94672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2302 gene.","definition_xrefs":["UniProtKB:O94672","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.04","synonyms":[{"name":"Spom972h-sec2302","type":"exact"}],"termid":"PR:O94672"}


id: PBO:0050303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 5","termid":"PBO:0050303"}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: GO:0110087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protease activator activity.","definition_xrefs":["PMID:23303392"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protease activator activity (obsolete GO:0110087)","termid":"GO:0110087"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["Unimod:354#W","OMSSA:85","PubMed:8839040","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: PBO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVII alpha 1 chain","termid":"PBO:0043598"}


id: GO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the acrosome membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"is_a","term_name":"lysosomal lumen","termid":"GO:0043202"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773","GO:0031410"],"is_obsolete":false,"name":"acrosomal lumen","termid":"GO:0043160"}


id: PBO:0003903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transporter Ctr6","termid":"PBO:0003903"}


id: PBO:0062696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 8 pseudogene","termid":"PBO:0062696"}


id: GO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor production","termid":"GO:0090271"}


id: PBO:0012002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs1","termid":"PBO:0012002"}


id: PBO:0076446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 2","termid":"PBO:0076446"}


id: PBO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exoribonuclease Rex4 (predicted)","termid":"PBO:0004719"}


id: GO:0102896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate = colnelenate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete colnelenate synthase activity (obsolete GO:0102896)","termid":"GO:0102896"}


id: PBO:0083701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated chaperone involved in protein targeting; redirects mitochondrial membrane protein precursors to mitochondrial translocation system; required for peroxisomal protein import and involved in peroxisome assembly; facilitates import of Mim1p and Mim2p into the mitochondrial outer membrane; homologous to E. coli DnaJ","termid":"PBO:0083701"}


id: GO:0003910
data:
  {"annotated_genes":["SJAG_02527","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89139,110406],"is_not":false,"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA ligase (ATP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DNA-LIGASE-ATP-RXN"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic acid repair enzyme","type":"related"},{"name":"deoxyribonucleic acid-joining enzyme","type":"related"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (ATP) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (ATP) activity","type":"related"},{"name":"sealase activity","type":"related"}],"termid":"GO:0003910","terms_by_termid":{"GO:0003910":null}}


id: GO:0055060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the physical partitioning and separation of a neuroblast into a neuroblast and a ganglion mother cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast fate commitment","termid":"GO:0014017"},{"relation_name":"is_a","term_name":"asymmetric neuroblast division","termid":"GO:0055059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric neuroblast division resulting in ganglion mother cell formation","termid":"GO:0055060"}


id: GO:0050968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of pain","synonyms":[{"name":"chemical nociception","type":"related"},{"name":"perception of pain, detection of chemical stimulus","type":"exact"},{"name":"perception of pain, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of pain","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of pain","type":"exact"}],"termid":"GO:0050968"}


id: RO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"},{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_in","termid":"RO:0002624"}


id: GO:0009801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cinnamic acid ester metabolic process","synonyms":[{"name":"cinnamic acid ester metabolism","type":"exact"}],"termid":"GO:0009801"}


id: PBO:0024814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_regulating","termid":"PBO:0024814"}


id: GO:0070569
data:
  {"annotated_genes":["SJAG_02954","SJAG_02178","SJAG_01443","SJAG_02383","SJAG_01089","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87370,88249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050265"},{"annotations":[110223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008108"},{"annotations":[99241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003977"},{"annotations":[110955,71919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an uridylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01443":null,"SJAG_02178":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"uridyl transferase activity","type":"exact"},{"name":"uridyltransferase activity","type":"exact"}],"termid":"GO:0070569","terms_by_termid":{"GO:0003977":null,"GO:0003983":null,"GO:0008108":null,"GO:0050265":null}}


id: GO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"positively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotransmitter uptake","synonyms":[{"name":"activation of neurotransmitter uptake","type":"narrow"},{"name":"positive regulation of neurotransmitter import","type":"exact"},{"name":"stimulation of neurotransmitter uptake","type":"narrow"},{"name":"up regulation of neurotransmitter uptake","type":"exact"},{"name":"up-regulation of neurotransmitter uptake","type":"exact"},{"name":"upregulation of neurotransmitter uptake","type":"exact"}],"termid":"GO:0051582"}


id: PBO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-b","termid":"PBO:0002364"}


id: GO:0033517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate metabolic process","synonyms":[{"name":"myo-inositol hexakisphosphate metabolism","type":"exact"},{"name":"phytate metabolic process","type":"exact"},{"name":"phytate metabolism","type":"exact"}],"termid":"GO:0033517"}


id: GO:0102220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dihydrogen + NAD + 2 an oxidized ferredoxin = NADH + 3 H+ + 2 a reduced ferredoxin.","definition_xrefs":["GOC:pz","RHEA:30279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydrogenase activity (NAD+, ferredoxin)","secondary_identifiers":["EC:1.12.1.4","MetaCyc:RXN-12215"],"termid":"GO:0102220"}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-118","Reactome:R-HSA-444100","RHEA:28967"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: PBO:0032734
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replaced existing SPAC110.05 which was in the wrong frame","termid":"PBO:0032734"}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: PBO:0050310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 12","termid":"PBO:0050310"}


id: PBO:0042131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 2","termid":"PBO:0042131"}


id: PBO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF-amide peptide precursor","termid":"PBO:0061306"}


id: PR:Q9HFR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00512","PRO:DNx","PANTHER:PTHR10678:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.04c","secondary_identifiers":["UniProtKB:Q9HFR0"],"synonyms":[{"name":"CSN complex subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SGN2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COPS2","type":"exact"}],"termid":"PR:Q9HFR0"}


id: PBO:0027019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nalidixic_acid","termid":"PBO:0027019"}


id: _global:phosphorylates
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"_global:molecularly_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylates","secondary_identifiers":["RO:0002447"],"termid":"_global:phosphorylates"}


id: PBO:0113551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex epsilon subunit, Ost2","termid":"PBO:0113551"}


id: PBO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR42","termid":"PBO:0017008"}


id: PBO:0074670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 56","termid":"PBO:0074670"}


id: GO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane catabolic process","synonyms":[{"name":"alkane breakdown","type":"exact"},{"name":"alkane catabolism","type":"exact"},{"name":"alkane degradation","type":"exact"}],"termid":"GO:0043448"}


id: GO:1990970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trans-activation response (TAR) element, a hairpin RNA structure located at the 5' end of all HIV-1 transcripts, and which is required for trans-activation of a viral promoter.","definition_xrefs":["PMID:25116364","Wikipedia:Trans-activation_response_element_(TAR)","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA binding","termid":"GO:0070883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"trans-activation response element binding","synonyms":[{"name":"TAR binding","type":"exact"}],"termid":"GO:1990970"}


id: PBO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc40","termid":"PBO:0004944"}


id: PBO:0058357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4730","termid":"PBO:0058357"}


id: PBO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj2","termid":"PBO:0001188"}


id: FYPO:0007467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"},{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during G0","synonyms":[{"name":"increased histone H3 K9 methylation during G0","type":"exact"},{"name":"increased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"increased histone H3K9me during G0","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007467"}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: GO:0070085
data:
  {"annotated_genes":["SJAG_03764","SJAG_01972","SJAG_02903","SJAG_04095","SJAG_04571","SJAG_03333","SJAG_00554","SJAG_01595","SJAG_01264","SJAG_04127","SJAG_04954","SJAG_03656","SJAG_05348","SJAG_01950","SJAG_02519","SJAG_01491","SJAG_00816","SJAG_04231","SJAG_00747","SJAG_03871","SJAG_04363","SJAG_02102","SJAG_01021","SJAG_04906","SJAG_00394","SJAG_00437","SJAG_05219","SJAG_02056","SJAG_03330","SJAG_01276","SJAG_00924","SJAG_00831","SJAG_04053","SJAG_02648","SJAG_03082","SJAG_04770","SJAG_04090","SJAG_03676","SJAG_03188","SJAG_00183","SJAG_04728","SJAG_02996","SJAG_03056","SJAG_00334","SJAG_01389","SJAG_04316","SJAG_04952","SJAG_03790","SJAG_04401","SJAG_03150","SJAG_03555","SJAG_01069","SJAG_00598","SJAG_02783","SJAG_03149","SJAG_03311","SJAG_02163","SJAG_04821","SJAG_03774","SJAG_01006","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61133,96550,95252,90467,103249,87704,101528,94966,86961,109071,96348,105818,94916,107609,92992,98849,113250,100116],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[104544,96585,110273,110467,114329,104915,92280,112594,94348,100319,102291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[97318,101051,105546,107431,99333,89724,95343,95491,96209,95333,89723,84102,95340,85790,99265,95341,97895,101592,102488,107232,107238,109213,114547,89725,114876,89722,95342,62811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[101477,89727,113357,95323,105819,95325,95347,107610,89728,114548,84103,95326,95344,96885,89726,95324,97905,99118,95346,89729,91895,94455,96551,95345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[95334,107239,107233,78818,99266,101052,114549,114877,100626,97319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[102489,98094,89607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment and further modification of carbohydrate residues to a substrate molecule.","definition_xrefs":["GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycosylation"],"termid":"GO:0070085","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: PBO:0012303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012303"}


id: GO:0031956
data:
  {"annotated_genes":["SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112275],"is_not":false,"summary":null,"term":"GO:0031956"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acid + ATP + CoA = a medium-chain fatty acyl-CoA + AMP + diphosphate. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:48340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875013","EC:6.2.1.2"],"synonyms":[{"name":"medium-chain fatty acid activation","type":"related"},{"name":"medium-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"medium-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031956","terms_by_termid":{"GO:0031956":null}}


id: FYPO:0006686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:0000729","PMID:21931565","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA double-strand break processing","synonyms":[{"name":"decreased DNA double-strand break resection","type":"exact"},{"name":"decreased DNA double-strand break resectioning","type":"exact"},{"name":"decreased DSB processing","type":"exact"},{"name":"reduced DNA double-strand break processing","type":"exact"}],"termid":"FYPO:0006686"}


id: PBO:0027737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring_during_mitotic_anaphase","termid":"PBO:0027737"}


id: PBO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone releasing hormone receptor","termid":"PBO:0048599"}


id: PBO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR56 (predicted)","termid":"PBO:0002865"}


id: GO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}


id: PBO:0048558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 3","termid":"PBO:0048558"}


id: GO:0008192
data:
  {"annotated_genes":["SJAG_04233","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[114308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140098","GO:0016779"],"is_obsolete":false,"name":"RNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008192","terms_by_termid":{"GO:0004484":null,"GO:0008193":null}}


id: GO:1990493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of cyclin H and cyclin-dependent kinase 7 (CDK7). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:9857180"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin H-CDK7 complex (obsolete GO:1990493)","synonyms":[{"name":"cyclin H-CDK7 complex","type":"exact"}],"termid":"GO:1990493"}


id: PBO:0079742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 8","termid":"PBO:0079742"}


id: GO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support bridging a synaptic signaling receptor and a downstream signaling molecule.","definition_xrefs":["PMID:10506216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"synaptic receptor adaptor activity","synonyms":[{"name":"GKAP/Homer scaffold activity","type":"narrow"},{"name":"GKAP/Homer scaffold protein","type":"narrow"},{"name":"postsynaptic density scaffold protein","type":"narrow"}],"termid":"GO:0030160"}


id: GO:0035476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of angioblasts, cells involved in blood vessel morphogenesis.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration","termid":"GO:0035476"}


id: PATO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000418 relative number value (obsolete PATO:0000418)","termid":"PATO:0000418"}


id: GO:1902228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["PMID:16705167","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"activation of M-CSF signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"positive regulation of M-CSF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up regulation of M-CSF signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up-regulation of M-CSF signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"upregulation of M-CSF signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902228"}


id: GO:0009102
data:
  {"annotated_genes":["SJAG_01935","SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75487,110612],"is_not":false,"summary":null,"term":"GO:0009102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin metabolic process","termid":"GO:0006768"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00673":null,"SJAG_01935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"biotin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:BIOTIN-SYN"],"synonyms":[{"name":"biotin anabolism","type":"exact"},{"name":"biotin biosynthesis","type":"exact"},{"name":"biotin formation","type":"exact"},{"name":"biotin synthesis","type":"exact"},{"name":"vitamin B7 biosynthesis","type":"exact"},{"name":"vitamin B7 biosynthetic process","type":"exact"},{"name":"vitamin H biosynthesis","type":"exact"},{"name":"vitamin H biosynthetic process","type":"exact"}],"termid":"GO:0009102","terms_by_termid":{"GO:0009102":null}}


id: GO:2001224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"positively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron migration","synonyms":[{"name":"positive regulation of neuron chemotaxis","type":"exact"},{"name":"positive regulation of neuron guidance","type":"related"},{"name":"positive regulation of neuronal migration","type":"exact"}],"termid":"GO:2001224"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: GO:0015257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete organic anion channel activity (obsolete GO:0015257)","synonyms":[{"name":"organic anion channel activity","type":"exact"}],"termid":"GO:0015257"}


id: GO:0015970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine tetraphosphate biosynthetic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine tetraphosphate anabolism","type":"exact"},{"name":"guanosine tetraphosphate biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate formation","type":"exact"},{"name":"guanosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015970"}


id: GO:0014817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a skeletal muscle satellite cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:16607119","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell commitment","termid":"GO:0014813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell fate specification","termid":"GO:0014817"}


id: PBO:0018216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_dependence_to","termid":"PBO:0018216"}


id: PBO:0042467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 4","termid":"PBO:0042467"}


id: GO:1901520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspyridone B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"aspyridone B metabolic process","termid":"GO:1901519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone B catabolic process","synonyms":[{"name":"aspyridone B breakdown","type":"exact"},{"name":"aspyridone B catabolism","type":"exact"},{"name":"aspyridone B degradation","type":"exact"}],"termid":"GO:1901520"}


id: GO:0070175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tooth mineralization","termid":"GO:0070172"},{"relation_name":"is_a","term_name":"regulation of enamel mineralization","termid":"GO:0070173"},{"relation_name":"positively_regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of enamel mineralization","termid":"GO:0070175"}


id: GO:2000358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"positively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney smooth muscle cell differentiation","termid":"GO:2000358"}


id: GO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044248","GO:0006091","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"anaerobic glycine catabolic process","synonyms":[{"name":"glycine fermentation","type":"exact"}],"termid":"GO:0019669"}


id: PBO:0084148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity maltose transporter; narrow substrate specificity, transporting maltose and turanose but not other alpha-glucosides; other names include alpha-glucoside transporter and maltose permease","termid":"PBO:0084148"}


id: PBO:0073896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 2","termid":"PBO:0073896"}


id: FYPO:0000669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a peptidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished peptidase activity","synonyms":[{"name":"abolished protease activity","type":"exact"},{"name":"peptidase activity abolished","type":"exact"}],"termid":"FYPO:0000669"}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: GO:0033251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a cephalosporin + H2O = a substituted beta-amino acid derivative of the cephalosporin.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete cephalosporinase activity (obsolete GO:0033251)","termid":"GO:0033251"}


id: FYPO:0000352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000352"}


id: GO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:tb","PMID:12675914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating dopamine receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by dopamine receptor signalling pathway","type":"related"},{"name":"dopamine receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0060158"}


id: PBO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 10","termid":"PBO:0042971"}


id: PBO:0070400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP1 axonemal microtubule associated","termid":"PBO:0070400"}


id: GO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a dendritic cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"},{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"dendritic cell cytokine production","termid":"GO:0002371"}


id: PBO:0038992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 1","termid":"PBO:0038992"}


id: PBO:0036488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylanthranilate transferase Trp4","termid":"PBO:0036488"}


id: PBO:0085940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant is defective in directing meiotic recombination events to homologous chromatids; the authentic, non-tagged protein is detected in highly purified mitochondria and is phosphorylated","termid":"PBO:0085940"}


id: PBO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 10, envelope","termid":"PBO:0046556"}


id: PR:Q9P4W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox8 gene.","definition_xrefs":["UniProtKB:Q9P4W1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide VIII, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.16c","synonyms":[{"name":"Spom972h-cox8","type":"exact"}],"termid":"PR:Q9P4W1"}


id: PBO:0005838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase (predicted)","termid":"PBO:0005838"}


id: PBO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54","termid":"PBO:0039561"}


id: PBO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.4","termid":"PBO:0000394"}


id: FYPO:0004215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 20 of histone H4 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H4-K20 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H4 K20 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H4-K20 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H4K20me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H4 K20 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004215"}


id: PBO:0058936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sheath formation associated","termid":"PBO:0058936"}


id: PBO:0068938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 181, pseudogene","termid":"PBO:0068938"}


id: GO:0022900
data:
  {"annotated_genes":["SJAG_01190","SJAG_01077","SJAG_03490","SJAG_04397","SJAG_05629","SJAG_00755","SJAG_07006","SJAG_00601","SJAG_MIT13","SJAG_01763","SJAG_00522","SJAG_02398","SJAG_MIT04","SJAG_01671","SJAG_04152","SJAG_00976","SJAG_01490","SJAG_02504","SJAG_01355","SJAG_03920","SJAG_MIT03","SJAG_02744","SJAG_07007","SJAG_00080","SJAG_02646","SJAG_MIT20","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043490"},{"annotations":[112617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042775"},{"annotations":[115550,115577,84789,115529,104810,110738,111968,111168,113330,112618,88524],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[109370],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[113267,85403,85770,109707],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[114663,100621,115555,114189,101031,112619,104490,86560,111609,109912],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[89763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140647"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors.","definition_xrefs":["GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00522":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_04397":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"electron transport chain","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Electron_transport_chain"],"termid":"GO:0022900","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0042775":null,"GO:0043490":null,"GO:0140647":null}}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: GO:0075252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredospore formation","synonyms":[{"name":"regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075252"}


id: PBO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 14","termid":"PBO:0070784"}


id: GO:0000179
data:
  {"annotated_genes":["SJAG_02821","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59305],"is_not":false,"summary":null,"term":"GO:0000179"},{"annotations":[105624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the dimethylation of two adjacent adenine residues in a rRNA, using S-adenosyl-L-methionine as a methyl donor.","definition_xrefs":["ISBN:1555811337","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02821":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790994","Reactome:R-HSA-6793066","GO:0043790"],"synonyms":[{"name":"18S rRNA dimethylase activity","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase activity","type":"exact"},{"name":"dimethyladenosine transferase activity","type":"exact"}],"termid":"GO:0000179","terms_by_termid":{"GO:0000179":null,"GO:0052909":null}}


id: GO:0036256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylamine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methylamine","termid":"GO:0036255"},{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methylamine","termid":"GO:0036256"}


id: PATO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an earlier onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predisplaced growth","synonyms":[{"name":"precocious growth","type":"exact"}],"termid":"PATO:0001754"}


id: GO:0038127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to a member of the ERBB family of receptor tyrosine kinases on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","PMID:16460914","Wikipedia:ErbB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB signaling pathway","synonyms":[{"name":"EGF receptor family signaling pathway","type":"exact"},{"name":"EGFR family signaling pathway","type":"related"},{"name":"ERBB signalling pathway","type":"exact"},{"name":"ErbB signaling","type":"exact"}],"termid":"GO:0038127"}


id: GO:0070898
data:
  {"annotated_genes":["SJAG_03120","SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99613,112716],"is_not":false,"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on a tRNA gene through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC), (which includes BDP1, BRF1, TBP, TFIIIC in human). The PIC engages RNA polymerase III on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["GOC:txnOH","PMID:11387215","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription preinitiation complex assembly","termid":"GO:0070897"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase III promoter","termid":"GO:0006384"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03007":null,"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA polymerase III preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000999","GO:0001021","GO:0001043","GO:0001020"],"synonyms":[{"name":"RNA polymerase III hybrid type promoter transcriptional preinitiation complex assembly","type":"narrow"},{"name":"RNA polymerase III transcription PIC biosynthesis","type":"exact"},{"name":"RNA polymerase III transcription PIC formation","type":"exact"},{"name":"RNA polymerase III transcriptional preinitiation complex assembly","type":"exact"},{"name":"RNA polymerase III transcriptional preinitiation complex formation","type":"exact"},{"name":"RNA polymerase III type 1 promoter transcriptional preinitiation complex assembly","type":"narrow"},{"name":"RNA polymerase III type 2 promoter transcriptional preinitiation complex assembly","type":"narrow"},{"name":"RNA polymerase III type 3 promoter transcriptional preinitiation complex assembly","type":"narrow"}],"termid":"GO:0070898","terms_by_termid":{"GO:0070898":null}}


id: GO:0032061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to osmotic stress","synonyms":[{"name":"down regulation of translation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032061"}


id: GO:0048750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compound eye corneal lens are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"},{"relation_name":"part_of","term_name":"compound eye corneal lens development","termid":"GO:0048058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens morphogenesis","termid":"GO:0048750"}


id: GO:0033793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2',4,4',6'-tetrahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = aureusidin 6-O-beta-glucoside + H2O, 2 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + 2 H+ + O2 = 2 aureusidin 6-O-beta-glucoside + 2 H2O, and 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = bracteatin 6-O-beta-glucoside + H2O. This activity consists of two separate chemical transformations: 3-hydroxylation and oxidative cyclization (2',-dehydrogenation).","definition_xrefs":["EC:1.21.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aureusidin synthase activity","synonyms":[{"name":"2',4,4',6'-tetrahydroxychalcone:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033793"}


id: PBO:0046129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 3","termid":"PBO:0046129"}


id: GO:0046774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any viral process that results in the inhibition of interferon activity within the host cell.","definition_xrefs":["PMID:10859382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation by virus of host immune response","termid":"GO:0075528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host intracellular interferon activity","synonyms":[{"name":"negative regulation by virus of intracellular interferon activity","type":"exact"},{"name":"suppression by virus of intracellular interferon activity in host","type":"exact"}],"termid":"GO:0046774"}


id: FYPO:0004318
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115738,116032],"is_not":false,"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle spindle assembly checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic spindle assembly checkpoint delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:11432827","PomBase:mah","GO:0007094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic spindle assembly checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abolished mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint abolished","type":"exact"}],"termid":"FYPO:0004318","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0061435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 4","termid":"PBO:0061435"}


id: PBO:0083725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 113 kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; interacts with and functions as a downstream effector of active, GTP-bound Sec4p, a Rab family GTPase","termid":"PBO:0083725"}


id: PATO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal","synonyms":[{"name":"average","type":"related"}],"termid":"PATO:0000461"}


id: PBO:0087459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; role in localizing Ypt7p to the vacuolar membrane; required for autophagy, the CVT pathway and mitophagy; potential Cdc28 substrate","termid":"PBO:0087459"}


id: PBO:0027245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5.8S_rRNA_level","termid":"PBO:0027245"}


id: PBO:0114088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase peripheral stalk subunit d","termid":"PBO:0114088"}


id: PBO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035740"}


id: PBO:0071126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 128","termid":"PBO:0071126"}


id: PBO:0018094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn3","termid":"PBO:0018094"}


id: FYPO:0008256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal at long terminal repeat (LTR) regions.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation at LTR during vegetative growth","termid":"FYPO:0008256"}


id: GO:0140955
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92055],"is_not":false,"summary":null,"term":"GO:0140955"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl36-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl36-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the lysine residue at position 36 of histone H3, producing histone H3K36me3.","definition_xrefs":["RHEA:60324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 methyltransferase activity","termid":"GO:0046975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0003674","GO:0008276","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone H3K36 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.359"],"synonyms":[{"name":"histone H3-K36 trimethylation","type":"broad"},{"name":"histone H3K36 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K36 trimethylase activity","type":"exact"},{"name":"histone H3K36 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0140955","terms_by_termid":{"GO:0140955":null}}


id: GO:0018550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3,5,6-tetrachlorohydroquinone + 2 glutathione = 2,3,6-trichlorohydroquinone + glutathione disulfide + HCl.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachloro-p-hydroquinone reductive dehalogenase activity (obsolete GO:0018550)","synonyms":[{"name":"tetrachlorohydroquinone reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018550"}


id: PBO:0044362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 51","termid":"PBO:0044362"}


id: GO:0150002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree that is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:20629984","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"distal dendrite","termid":"GO:0150002"}


id: GO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hair cycle by canonical Wnt signaling pathway (obsolete GO:0060901)","synonyms":[{"name":"regulation of hair cycle by Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0060901"}


id: PBO:0043881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB/ATF bZIP transcription factor","termid":"PBO:0043881"}


id: PBO:0076754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 4","termid":"PBO:0076754"}


id: GO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"negatively_regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell differentiation","synonyms":[{"name":"down regulation of muscle cell differentiation","type":"exact"},{"name":"down-regulation of muscle cell differentiation","type":"exact"},{"name":"downregulation of muscle cell differentiation","type":"exact"},{"name":"inhibition of muscle cell differentiation","type":"narrow"}],"termid":"GO:0051148"}


id: GO:0005014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKA receptor activity (obsolete GO:0005014)","synonyms":[{"name":"neurotrophin TRKA receptor activity","type":"exact"}],"termid":"GO:0005014"}


id: PBO:0079514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine phosphorylase","termid":"PBO:0079514"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30003614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: GO:0030790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + trichlorophenol = S-adenosyl-L-homocysteine + trichloroanisole.","definition_xrefs":["EC:2.1.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"chlorophenol O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.136-RXN","RHEA:18909"],"synonyms":[{"name":"S-adenosyl-L-methionine:trichlorophenol O-methyltransferase activity","type":"related"},{"name":"halogenated phenol O-methyltransferase activity","type":"broad"},{"name":"trichlorophenol O-methyltransferase activity","type":"related"}],"termid":"GO:0030790"}


id: MOD:01409
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three hydroxyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trihydroxylated residue","synonyms":[{"name":"Hy3Res","type":"exact"}],"termid":"MOD:01409"}


id: GO:0098726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a skeletal muscle satellite stem cell, resulting in two skeletal muscle satellite stem cells. This process is involved in amplification of the pool of these cells.","definition_xrefs":["PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"},{"relation_name":"is_a","term_name":"symmetric stem cell division","termid":"GO:0098724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric division of skeletal muscle satellite stem cell","termid":"GO:0098726"}


id: PBO:0084253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol hexakisphosphate and inositol heptakisphosphate kinase; generation of high energy inositol pyrophosphates by Kcs1p is required for many processes such as vacuolar biogenesis, stress response, RNA polymerase I-mediated rRNA transcription and telomere maintenance; inositol hexakisphosphate is also known as IP6; inositol heptakisphosphate is also known as IP7","termid":"PBO:0084253"}


id: PBO:0075405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 3","termid":"PBO:0075405"}


id: GO:0008671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-galactonate + ATP = 6-phospho-2-dehydro-3-deoxy-D-galactonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.58","RHEA:16525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxygalactonokinase activity","secondary_identifiers":["KEGG_REACTION:R03387","MetaCyc:DEHYDDEOXGALACTKIN-RXN"],"synonyms":[{"name":"2-keto-3-deoxy-galactonokinase activity","type":"related"},{"name":"2-keto-3-deoxygalactonate kinase (phosphorylating)","type":"related"},{"name":"2-keto-3-deoxygalactonokinase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate kinase activity","type":"related"},{"name":"ATP:2-dehydro-3-deoxy-D-galactonate 6-phosphotransferase activity","type":"related"}],"termid":"GO:0008671"}


id: GO:1903345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GO_REF:0000058","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein polyglycylation","termid":"GO:1903344"},{"relation_name":"negatively_regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein polyglycylation","synonyms":[{"name":"down regulation of protein polyglycylation","type":"exact"},{"name":"down-regulation of protein polyglycylation","type":"exact"},{"name":"downregulation of protein polyglycylation","type":"exact"},{"name":"inhibition of protein polyglycylation","type":"narrow"}],"termid":"GO:1903345"}


id: FYPO:0004928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"fragmented DNA during vegetative growth","synonyms":[{"name":"DNA fragmentation during vegetative growth","type":"exact"},{"name":"fragmented DNA during mitotic cell cycle","type":"related"},{"name":"fragmented nucleus during vegetative growth","type":"related"}],"termid":"FYPO:0004928"}


id: PBO:0088000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors","termid":"PBO:0088000"}


id: PBO:0026883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0026883"}


id: PBO:0049117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 182","termid":"PBO:0049117"}


id: GO:0048025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA splicing","termid":"GO:0033119"},{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"is_a","term_name":"negative regulation of mRNA processing","termid":"GO:0050686"},{"relation_name":"negatively_regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA splicing, via spliceosome","secondary_identifiers":["GO:0035056"],"synonyms":[{"name":"down regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"down regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"down-regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"down-regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"downregulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"downregulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"inhibition of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"inhibition of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"negative regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"negative regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"negative regulation of pre-mRNA splicing","type":"broad"}],"termid":"GO:0048025"}


id: GO:0140571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Oxidation of Fe(3+) to Fe(2+) on the outer side of a membrane coupled to the reduction of L-ascorbate to monodehydro-L-ascorbate radical on the inner side of a membrane. Electrons get transferred across the membrane during the reaction.","definition_xrefs":["PMID:24449903","PMID:16911521","RHEA:30403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0003824","GO:0016491","GO:0022857"],"is_obsolete":false,"name":"transmembrane ascorbate ferrireductase activity","secondary_identifiers":["EC:7.2.1.3","MetaCyc:RXN-15598"],"synonyms":[{"name":"L-ascorbate-cytochrome-b5 reductase activity","type":"exact"},{"name":"L-ascorbate:ferricytochrome-b5 oxidoreductase activity","type":"exact"},{"name":"ascorbate-cytochrome b5 reductase activity","type":"exact"}],"termid":"GO:0140571"}


id: PR:O94252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.02","synonyms":[{"name":"Spom972h-rng9","type":"exact"}],"termid":"PR:O94252"}


id: PATO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000876 respiratory rate value (obsolete PATO:0000876)","termid":"PATO:0000876"}


id: MOD:00390
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-decanoyl-L-serine.","definition_xrefs":["Unimod:449#S","PubMed:12630926","RESID:AA0385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-decanoylated residue","termid":"MOD:00668"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-decanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(decanoyloxy)propanoic acid","type":"exact"},{"name":"Decanoyl","type":"related"},{"name":"L-serine decanoate ester","type":"exact"},{"name":"LIPID O-decanoyl serine","type":"exact"},{"name":"O-decanoyl-L-serine","type":"exact"},{"name":"O-decanoylated L-serine","type":"exact"},{"name":"O3-decanoyl-L-serine","type":"exact"},{"name":"ODecSer","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00390"}


id: PBO:0065055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 9","termid":"PBO:0065055"}


id: PBO:0074115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 1","termid":"PBO:0074115"}


id: PBO:0016887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic docking protein Mso1","termid":"PBO:0016887"}


id: PBO:0074306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX9 ribosome biogenesis factor","termid":"PBO:0074306"}


id: PBO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035997"}


id: PBO:0044957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4","termid":"PBO:0044957"}


id: PBO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase (predicted)","termid":"PBO:0002446"}


id: GO:0007005
data:
  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id: MOD:01380
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id: PBO:0036089
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id: GO:0044089
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id: PBO:0027492
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id: PBO:0068019
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id: GO:0071269
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id: GO:0075075
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id: PR:Q9P7H3
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id: PBO:0082924
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id: GO:0033670
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id: PBO:0028951
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id: PBO:0069091
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id: PBO:0056286
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id: FYPO:0005643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased, and an increased amount of the protein is instead detected in the nucleus and at the spindle pole body.","definition_xrefs":["PomBase:mah","PMID:24478458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","synonyms":[{"name":"decreased protein localisation to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell end, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and SPB","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"}],"termid":"FYPO:0005643"}


id: PBO:0089521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Fig4","termid":"PBO:0089521"}


id: PBO:0016124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type m-specific polypeptide Mc","termid":"PBO:0016124"}


id: PBO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine hydroxymethyltransferase (predicted)","termid":"PBO:0001867"}


id: GO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the shaping of the coronary vasculature.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in coronary vasculature morphogenesis","termid":"GO:0003201"}


id: PATO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleated","termid":"PATO:0002505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mononucleate","termid":"PATO:0001407"}


id: PBO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone N-acetyltransferase Naa40/NatD","termid":"PBO:0090201"}


id: PBO:0070117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 31 pseudogene","termid":"PBO:0070117"}


id: PBO:0054622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2027","termid":"PBO:0054622"}


id: GO:0050261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ribofuranose = D-ribulose.","definition_xrefs":["RHEA:20796","EC:5.3.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"ribose isomerase activity","secondary_identifiers":["MetaCyc:RIBOSE-ISOMERASE-RXN","KEGG_REACTION:R01081"],"synonyms":[{"name":"D-ribose aldose-ketose-isomerase activity","type":"related"},{"name":"D-ribose isomerase activity","type":"related"},{"name":"D-ribose ketol-isomerase activity","type":"related"}],"termid":"GO:0050261"}


id: PR:Q09681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh2 gene.","definition_xrefs":["UniProtKB:Q09681","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.13c","synonyms":[{"name":"Spom972h-gmh2","type":"exact"}],"termid":"PR:Q09681"}


id: PBO:0081787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 714","termid":"PBO:0081787"}


id: GO:0034208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of an acetyl group from a steroid molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid deacetylation (obsolete GO:0034208)","termid":"GO:0034208"}


id: PBO:0054973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2387","termid":"PBO:0054973"}


id: GO:0006427
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104897],"is_not":false,"summary":null,"term":"GO:0006427"}]},"cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. The histidyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3''-OH group of a histidine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"histidyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006427","terms_by_termid":{"GO:0006427":null}}


id: _global:finished_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Xy is finished_by Y if Y part of X, and X and Y share a 3' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_by","termid":"_global:finished_by"}


id: GO:1901194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0002181","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of translation preinitiation complex","synonyms":[{"name":"down regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down regulation of translation preinitiation complex assembly","type":"exact"},{"name":"down-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"downregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"downregulation of formation of translation preinitiation complex","type":"exact"},{"name":"downregulation of translation preinitiation complex assembly","type":"exact"},{"name":"inhibition of formation of translation pre-initiation complex","type":"exact"},{"name":"inhibition of formation of translation preinitiation complex","type":"narrow"},{"name":"inhibition of translation preinitiation complex assembly","type":"exact"},{"name":"negative regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"negative regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901194"}


id: PBO:0051204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-4","termid":"PBO:0051204"}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["RHEA:14213","MetaCyc:1PFRUCTPHOSN-RXN"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: PBO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounds","termid":"PBO:0034122"}


id: GO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of anatomical boundary","termid":"GO:0048859"}


id: GO:1905016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1665486"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of isoleucine-tRNA ligase activity (obsolete GO:1905016)","synonyms":[{"name":"down regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down regulation of isoleucine translase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of isoleucine translase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"downregulation of isoleucine translase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"downregulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"inhibition of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of isoleucine translase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucine-transfer RNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"negative regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of isoleucine translase activity","type":"exact"},{"name":"negative regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"negative regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905016"}


id: PBO:0048449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grancalcin","termid":"PBO:0048449"}


id: GO:0070981
data:
  {"annotated_genes":["SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98713],"is_not":false,"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, (2S)-2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine biosynthetic process","termid":"GO:0006529"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"L-asparagine metabolic process","termid":"GO:0070982"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-asparagine anabolism","type":"exact"},{"name":"L-asparagine biosynthesis","type":"exact"},{"name":"L-asparagine formation","type":"exact"},{"name":"L-asparagine synthesis","type":"exact"}],"termid":"GO:0070981","terms_by_termid":{"GO:0070981":null}}


id: PBO:0052294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 3 like, subcortical maternal complex member","termid":"PBO:0052294"}


id: GO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an olfactory bulb tufted cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb tufted cell development","termid":"GO:0061449"}


id: PATO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased temperature","secondary_identifiers":["PATO:0000677"],"synonyms":[{"name":"cold","type":"exact"},{"name":"low temperature","type":"exact"}],"termid":"PATO:0001306"}


id: FYPO:0005109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:21518960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"premature protein localization to chromatin at replication origin","synonyms":[{"name":"advanced protein localization to chromatin at replication origin","type":"exact"},{"name":"premature protein localisation to chromatin at replication origin","type":"exact"},{"name":"premature protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"premature protein localization to chromatin at replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005109"}


id: PBO:0088955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen34","termid":"PBO:0088955"}


id: GO:0033058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another along an axis.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional locomotion","termid":"GO:0033058"}


id: GO:0004586
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85480],"is_not":false,"summary":null,"term":"GO:0004586"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + H+ = CO2 + putrescine.","definition_xrefs":["RHEA:22964","EC:4.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ornithine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00670","Reactome:R-HSA-70692","MetaCyc:ORNDECARBOX-RXN"],"synonyms":[{"name":"L-ornithine carboxy-lyase (putrescine-forming)","type":"related"},{"name":"L-ornithine carboxy-lyase activity","type":"narrow"},{"name":"SpeC","type":"related"}],"termid":"GO:0004586","terms_by_termid":{"GO:0004586":null}}


id: GO:0062091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the chloroplast inner membrane and facing the stroma that is associated with the chloroplast inner membrane translocase complex and provides the ATPase motor activity to drive import of proteins into the chloroplast stroma.","definition_xrefs":["PMID:30309901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ycf2/FtsHi complex","synonyms":[{"name":"TIC complex associated chloroplast protein import motor","type":"exact"}],"termid":"GO:0062091"}


id: SO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is polycistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_transcript","synonyms":[{"name":"polycistronic transcript","type":"exact"}],"termid":"SO:0000078"}


id: GO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:pf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate adhesion","termid":"GO:0010810"}


id: GO:0046547
data:
  {"annotated_genes":["SJAG_02973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91249,91253],"is_not":false,"summary":null,"term":"GO:0046547"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + trans-aconitate = (E)-2-(methoxycarbonylmethyl)but-2-enedioate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:22200","EC:2.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.1.1.145-RXN","KEGG_REACTION:R05764"],"synonyms":[{"name":"S-adenosyl-L-methionine:(E)-prop-1-ene-1,2,3-tricarboxylate 3'-O-methyltransferase activity","type":"related"}],"termid":"GO:0046547","terms_by_termid":{"GO:0046547":null}}


id: GO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyguanosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine biosynthetic process","termid":"GO:0042452"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyguanosine salvage","termid":"GO:0006180"}


id: GO:2001091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nigerotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nigerotriose transport","termid":"GO:2001091"}


id: GO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form either the mono-, di- or trimethylated derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine methylation","termid":"GO:0018022"}


id: PBO:0036493
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26 copies of a 35 amino acid repeat","termid":"PBO:0036493"}


id: PBO:0055684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member N","termid":"PBO:0055684"}


id: GO:0032984
data:
  {"annotated_genes":["SJAG_02624","SJAG_03126","SJAG_01252","SJAG_05025","SJAG_02700","SJAG_04312","SJAG_05265","SJAG_00723","SJAG_00308","SJAG_05221","SJAG_04841","SJAG_00840","SJAG_03301","SJAG_00286","SJAG_02699","SJAG_00206","SJAG_02314","SJAG_01696","SJAG_03949","SJAG_01224","SJAG_03345","SJAG_04909","SJAG_00279","SJAG_01993","SJAG_06309","SJAG_02433","SJAG_00330","SJAG_00642","SJAG_03232","SJAG_02560","SJAG_02189","SJAG_03025","SJAG_01518","SJAG_02601","SJAG_00597","SJAG_03658","SJAG_05296","SJAG_01894","SJAG_02336","SJAG_01297","SJAG_02704","SJAG_04862","SJAG_02414","SJAG_01653","SJAG_00338","SJAG_02812","SJAG_03380","SJAG_04283","SJAG_04038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97476,89113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[93856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[110157,85845,86669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097352"},{"annotations":[91197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[110830,84847,88901,95466],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[86884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[105689,91691,87673,103707,114000,91373,105688,91690,112538,93049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[102417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903259"},{"annotations":[100438,104782,86206,114648,95194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[92506,92071,98620,101239,95222,108048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[100209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[113413,86654,93657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[100446,104791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[94189],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[98403],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[108486],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[105693,91374,105692],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[108239],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[97306,87748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035494"},{"annotations":[110373,84371,85578,86774,101060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"},{"annotations":[99943,61558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006415"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-containing macromolecular complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"protein-containing complex 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complex disassembly","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0043241","GO:0043624","GO:0034623"],"synonyms":[{"name":"cellular macromolecule complex disassembly","type":"related"},{"name":"cellular protein complex disassembly","type":"related"},{"name":"macromolecule complex disassembly","type":"related"},{"name":"protein complex disassembly","type":"exact"}],"termid":"GO:0032984","terms_by_termid":{"GO:0000390":null,"GO:0002184":null,"GO:0006337":null,"GO:0006415":null,"GO:0006449":null,"GO:0007019":null,"GO:0016240":null,"GO:0030042":null,"GO:0031117":null,"GO:0035494":null,"GO:0045905":null,"GO:0051016":null,"GO:0060172":null,"GO:0070126":null,"GO:0070462":null,"GO:0072318":null,"GO:0097352":null,"GO:0140516":null,"GO:1901098":null,"GO:1903259":null,"GO:1904595":null}}


id: PBO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Tvp23 (predicted)","termid":"PBO:0004276"}


id: PBO:0075886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1","termid":"PBO:0075886"}


id: GO:0014723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by changing calcium ion binding affinity of the myofibril.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by calcium ion signaling","termid":"GO:0014722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by modulation of calcium ion sensitivity of myofibril","synonyms":[{"name":"regulation of calcium ion sensitivity of myofibril involved in skeletal muscle contraction","type":"exact"}],"termid":"GO:0014723"}


id: GO:0140242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation at postsynapse","termid":"GO:0140242"}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:11432827"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: PBO:0070917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 25","termid":"PBO:0070917"}


id: PBO:0079523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane immune signaling adaptor TYROBP","termid":"PBO:0079523"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: FYPO:0002981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to methyl methanesulfonate. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased chromatin binding during cellular response to MMS","type":"exact"},{"name":"increased chromatin binding during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002981"}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: SO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the lysosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lysosomal_localization_signal","synonyms":[{"name":"lysosomal localization signal","type":"exact"}],"termid":"SO:0001530"}


id: PBO:0055927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A15, pseudogene","termid":"PBO:0055927"}


id: PBO:0045727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 4","termid":"PBO:0045727"}


id: GO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete alanine racemization (obsolete GO:0018086)","synonyms":[{"name":"alanine racemization","type":"exact"}],"termid":"GO:0018086"}


id: GO:1900094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in determination of left/right symmetry.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry (obsolete GO:1900094)","synonyms":[{"name":"global transcription regulation from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"global transcription regulation from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of transcription from Pol II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from Pol II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right asymmetry","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right symmetry","type":"related"}],"termid":"GO:1900094"}


id: GO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate metabolic process","synonyms":[{"name":"3-(3-hydroxy)phenylpropionate metabolism","type":"exact"}],"termid":"GO:0046435"}


id: GO:1905422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"negatively_regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant organ morphogenesis","synonyms":[{"name":"down regulation of plant organ morphogenesis","type":"exact"},{"name":"down-regulation of plant organ morphogenesis","type":"exact"},{"name":"downregulation of plant organ morphogenesis","type":"exact"},{"name":"inhibition of plant organ morphogenesis","type":"narrow"}],"termid":"GO:1905422"}


id: PBO:0062904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-ACP synthase, mitochondrial","termid":"PBO:0062904"}


id: PBO:0080766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xin actin binding repeat containing 1","termid":"PBO:0080766"}


id: PBO:0070852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 5","termid":"PBO:0070852"}


id: PBO:0040327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 2","termid":"PBO:0040327"}


id: PBO:0083567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ERV46/YAL042W; YAL042C-A is a non-essential gene","termid":"PBO:0083567"}


id: GO:0070826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex that contains integrin, mobilferrin and a flavin monooxygenase, is capable of reducing Fe(III) to Fe(II) utilizing NADPH, and is involved in iron transport. Fe(II) is required in the cell as the substrate for ferrochelatase in the synthesis of heme.","definition_xrefs":["PMID:11842004","PMID:8639593","GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"paraferritin complex","termid":"GO:0070826"}


id: GO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of granulocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"negatively_regulates","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulocyte differentiation","synonyms":[{"name":"down regulation of granulocyte differentiation","type":"exact"},{"name":"down-regulation of granulocyte differentiation","type":"exact"},{"name":"downregulation of granulocyte differentiation","type":"exact"},{"name":"inhibition of granulocyte differentiation","type":"narrow"}],"termid":"GO:0030853"}


id: PR:Q9P546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps002 gene.","definition_xrefs":["UniProtKB:Q9P546","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ698.02c","synonyms":[{"name":"Spom972h-rps002","type":"exact"}],"termid":"PR:Q9P546"}


id: PBO:0086679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; deletion exhibits slow-growth phenotype; computationally predicted to have a role in cell budding","termid":"PBO:0086679"}


id: PBO:0049890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 9","termid":"PBO:0049890"}


id: GO:2001008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"positively_regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellulose biosynthetic process","synonyms":[{"name":"positive regulation of cellulose anabolism","type":"exact"},{"name":"positive regulation of cellulose biosynthesis","type":"exact"},{"name":"positive regulation of cellulose formation","type":"exact"},{"name":"positive regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001008"}


id: GO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate or frequency of pancreatic B cell proliferation. Pancreatic B cell are cells of the pancreas that secrete insulin.","definition_xrefs":["GOC:yaf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of type B pancreatic cell proliferation (obsolete GO:0044343)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"related"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of pancreatic B cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of pancreatic B cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:0044343"}


id: PR:000027549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:15226425","PomBase:MAH","PMID:21516229","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"Spom-HTA2/UnMod","type":"exact"}],"termid":"PR:000027549"}


id: GO:1990049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body.","definition_xrefs":["PMID:23358451","GOC:kmv","PMID:24762653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"dense core granule cytoskeletal transport","termid":"GO:0099519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"retrograde neuronal dense core vesicle transport","synonyms":[{"name":"retrograde dense core granule trafficking","type":"exact"},{"name":"retrograde dense core granule transport","type":"exact"}],"termid":"GO:1990049"}


id: GO:0015817
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[100380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"histidine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transport","type":"narrow"}],"termid":"GO:0015817","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: GO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase (obsolete GO:0006989)","synonyms":[{"name":"unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase","type":"exact"}],"termid":"GO:0006989"}


id: PBO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue3 (predicted)","termid":"PBO:0005728"}


id: PBO:0038836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 3","termid":"PBO:0038836"}


id: GO:0008913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty acyl-[ACP] + an alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-lipid IVA = an alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-(acyl)-lipid IVA + holo-[ACP].","definition_xrefs":["EC:2.3.1.241","PMID:18656959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"Kdo2-lipid IVA acyltransferase activity","synonyms":[{"name":"(Kdo)2-lipid IVA lauroyltransferase","type":"related"},{"name":"Kdo2-lipid IVA lauroyltransferase","type":"related"},{"name":"alpha-Kdo-(2->4)-alpha-(2->6)-lipid IVA lauroyltransferase","type":"related"},{"name":"lauroyl transferase activity","type":"related"},{"name":"lauroyltransferase activity","type":"related"}],"termid":"GO:0008913"}


id: PBO:0051906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha E","termid":"PBO:0051906"}


id: PBO:0054242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1624","termid":"PBO:0054242"}


id: PBO:0017638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf PARP type zinc finger protein Hpz2","termid":"PBO:0017638"}


id: PATO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atretic","synonyms":[{"name":"atresia","type":"exact"}],"termid":"PATO:0001819"}


id: PBO:0057601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 938","termid":"PBO:0057601"}


id: MOD:00218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-serine.","definition_xrefs":["PubMed:1705009","RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-RNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-ribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-serine","type":"exact"},{"name":"O-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00218"}


id: FYPO:0006886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0006551","FYPO:0000120"],"is_obsolete":false,"name":"increased protein level at mitotic spindle","synonyms":[{"name":"increased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"increased protein level in mitotic spindle","type":"exact"},{"name":"protein accumulation at mitotic spindle","type":"exact"}],"termid":"FYPO:0006886"}


id: PBO:0059607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 19","termid":"PBO:0059607"}


id: PBO:0013460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70","termid":"PBO:0013460"}


id: MOD:01444
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["PubMed:11435113","PubMed:17558559","RESID:AA0492#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01444"}


id: PBO:0075631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2A","termid":"PBO:0075631"}


id: GO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac left ventricular trabecular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003220"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular trabecular myocardium morphogenesis","termid":"GO:0003225"}


id: PBO:0062821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive serine rich 1","termid":"PBO:0062821"}


id: GO:0035453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid inner membrane","termid":"GO:0009528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of plastid inner membrane","synonyms":[{"name":"extrinsic to plastid inner membrane","type":"narrow"},{"name":"peripheral to plastid inner membrane","type":"exact"}],"termid":"GO:0035453"}


id: PBO:0027536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027536"}


id: GO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome cL] + a primary alcohol = 2 [Fe(II)cytochrome cL] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c(L)) activity","secondary_identifiers":["GO:0052930","GO:0052931","KEGG_REACTION:R10713","MetaCyc:RXN-11332","EC:1.1.2.7","GO:0052932"],"synonyms":[{"name":"2-chloroethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"alcohol:cytochrome c(L) oxidoreductase activity","type":"exact"},{"name":"ethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"methanol dehydrogenase activity","type":"narrow"},{"name":"methanol ferricytochrome-c oxidoreductase activity","type":"narrow"}],"termid":"GO:0052933"}


id: FYPO:0005478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to arsenic-containing substance","termid":"FYPO:0003477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"abolished protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to arsenite ion","type":"exact"}],"termid":"FYPO:0005478"}


id: GO:0014042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron maturation","synonyms":[{"name":"activation of neuron maturation","type":"narrow"},{"name":"stimulation of neuron maturation","type":"narrow"},{"name":"up regulation of neuron maturation","type":"exact"},{"name":"up-regulation of neuron maturation","type":"exact"},{"name":"upregulation of neuron maturation","type":"exact"}],"termid":"GO:0014042"}


id: GO:0075091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein alpha subunit (obsolete GO:0075091)","termid":"GO:0075091"}


id: PBO:0081166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFX antisense RNA 1","termid":"PBO:0081166"}


id: GO:0032888
data:
  {"annotated_genes":["SJAG_03048","SJAG_04464","SJAG_02332","SJAG_00244","SJAG_00082","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107539],"is_not":false,"summary":null,"term":"GO:0032888"},{"annotations":[98920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[90986,86586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107960],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[111562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle elongation","termid":"GO:0032887"},{"relation_name":"part_of","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032888","terms_by_termid":{"GO:0032888":null,"GO:0110161":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null}}


id: PBO:0090570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7","termid":"PBO:0090570"}


id: PBO:0055533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2968","termid":"PBO:0055533"}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: GO:1902250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","PMID:14569084","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte apoptotic process","synonyms":[{"name":"regulation of RBC apoptosis","type":"narrow"},{"name":"regulation of RBC apoptotic process","type":"exact"},{"name":"regulation of erythrocyte apoptosis","type":"narrow"},{"name":"regulation of red blood cell apoptosis","type":"narrow"},{"name":"regulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902250"}


id: FYPO:0002267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutamate-ammonia ligase activity","synonyms":[{"name":"abnormal GS activity","type":"exact"},{"name":"abnormal glutamine synthetase activity","type":"exact"},{"name":"abnormal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0002267"}


id: GO:0060621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cholesterol import. Cholesterol import is the directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"negatively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cholesterol import","termid":"GO:0060621"}


id: PBO:0082925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome oxidase assembly factor; null mutation results in respiratory deficiency with specific loss of cytochrome oxidase activity; functions downstream of assembly factors Mss51p and Coa1p and interacts with assembly factor Shy1p","termid":"PBO:0082925"}


id: PBO:0053940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1241","termid":"PBO:0053940"}


id: GO:1905326
data:
  {"annotated_genes":["SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110295],"is_not":false,"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26483559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of meiosis I spindle assembly checkpoint","termid":"GO:1905325"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiosis I spindle assembly checkpoint","type":"narrow"},{"name":"up regulation of meiosis I spindle assembly checkpoint","type":"exact"},{"name":"up-regulation of meiosis I spindle assembly checkpoint","type":"exact"},{"name":"upregulation of meiosis I spindle assembly checkpoint","type":"exact"}],"termid":"GO:1905326","terms_by_termid":{"GO:1905326":null}}


id: GO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asperthecin biosynthetic process","synonyms":[{"name":"asperthecin biosynthesis","type":"exact"},{"name":"asperthecin formation","type":"exact"},{"name":"asperthecin synthesis","type":"exact"}],"termid":"GO:0036184"}


id: GO:0036108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["PMID:15695810","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process","termid":"GO:0036107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate anabolism","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthesis","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate formation","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate synthesis","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N biosynthesis","type":"exact"}],"termid":"GO:0036108"}


id: GO:0006040
data:
  {"annotated_genes":["SJAG_00519","SJAG_03723","SJAG_00978","SJAG_02845","SJAG_04728","SJAG_00620","SJAG_01443","SJAG_01453","SJAG_00442","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85121,85294,106578,70424,84783,99331,101196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"},{"annotations":[99334,85122,84784,99240,57737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00519":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_01453":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino sugar metabolism","type":"exact"},{"name":"aminosaccharide metabolic process","type":"exact"},{"name":"aminosaccharide metabolism","type":"exact"}],"termid":"GO:0006040","terms_by_termid":{"GO:0006031":null,"GO:0006032":null,"GO:0006048":null}}


id: PBO:0050249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 27","termid":"PBO:0050249"}


id: GO:0097255
data:
  {"annotated_genes":["SJAG_04355","SJAG_03036"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98239,108757],"is_not":false,"summary":null,"term":"GO:0097255"}]},"cv_name":"cellular_component","definition":"A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.","definition_xrefs":["PMID:21925213","PMID:15766533","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03036":null,"SJAG_04355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"R2TP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097255","terms_by_termid":{"GO:0097255":null}}


id: PBO:0042188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin C","termid":"PBO:0042188"}


id: PBO:0059395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S28","termid":"PBO:0059395"}


id: GO:0097620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxy-2-phenylacetate + acceptor = phenylglyoxylate + reduced acceptor.","definition_xrefs":["PMID:1731758","RHEA:43112","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-mandelate dehydrogenase activity","synonyms":[{"name":"D-mandelate dehydrogenase activity","type":"exact"}],"termid":"GO:0097620"}


id: PBO:0083442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF CCT6/YDR188W","termid":"PBO:0083442"}


id: PBO:0065750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 2","termid":"PBO:0065750"}


id: PBO:0072651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 4","termid":"PBO:0072651"}


id: GO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a lipid antigen to the antigen binding groove of an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the CD1 gene family.","definition_xrefs":["PMID:15928678","GOC:add","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex assembly","termid":"GO:0065005"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex assembly","termid":"GO:0002398"},{"relation_name":"part_of","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"lipid antigen assembly with MHC class Ib protein complex","termid":"GO:0002493"}


id: GO:1904093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GO_REF:0000058","GOC:bhm","PMID:25736836","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of autophagic cell death","termid":"GO:1904092"},{"relation_name":"negatively_regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagic cell death","synonyms":[{"name":"down regulation of autophagic cell death","type":"exact"},{"name":"down regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down regulation of type II programmed cell death","type":"related"},{"name":"down-regulation of autophagic cell death","type":"exact"},{"name":"down-regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down-regulation of type II programmed cell death","type":"related"},{"name":"downregulation of autophagic cell death","type":"exact"},{"name":"downregulation of programmed cell death by macroautophagy","type":"exact"},{"name":"downregulation of type II programmed cell death","type":"related"},{"name":"inhibition of autophagic cell death","type":"narrow"},{"name":"inhibition of programmed cell death by macroautophagy","type":"narrow"},{"name":"inhibition of type II programmed cell death","type":"related"},{"name":"negative regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"negative regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904093"}


id: PBO:0086215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0086215"}


id: PBO:0062691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 2","termid":"PBO:0062691"}


id: GO:1902117
data:
  {"annotated_genes":["SJAG_03851","SJAG_05289","SJAG_01837","SJAG_03048","SJAG_00718","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105089,105181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[98926,86236,113186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"positively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organelle assembly","type":"narrow"},{"name":"up regulation of organelle assembly","type":"exact"},{"name":"up-regulation of organelle assembly","type":"exact"},{"name":"upregulation of organelle assembly","type":"exact"}],"termid":"GO:1902117","terms_by_termid":{"GO:0110161":null,"GO:1905561":null,"GO:2000786":null}}


id: MOD:00878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod - Mechanism of the reaction of imidoesters with amines","definition_xrefs":["Unimod:456","URL:http://dx.doi.org/10.1021/ja00877a017","PubMed:7171546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate doubly attached","synonyms":[{"name":"Both ends of crosslink attached to same peptide","type":"related"},{"name":"Xlink:DMP","type":"related"}],"termid":"MOD:00878"}


id: PBO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliated left-right organizer metallopeptidase","termid":"PBO:0043179"}


id: FYPO:0001421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein processing during vegetative growth","synonyms":[{"name":"abnormal protein cleavage during vegetative growth","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"abnormal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001421"}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: PBO:0035694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_negative_effect","termid":"PBO:0035694"}


id: FYPO:0006107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells mate and undergo meiotic nuclear division and sporulation in the presence of nutrients, notably nitrogen and glucose. Normally, fission yeast mate, undergo meiosis, and sporulate only under conditions of nitrogen and carbon starvation.","definition_xrefs":["PMID:27613427","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"mating, meiosis, and sporulation without starvation","synonyms":[{"name":"conjugation, meiosis, and sporulation without starvation","type":"exact"},{"name":"deregulated sporulation","type":"related"},{"name":"mating, meiotic nuclear division, and sporulation without starvation","type":"exact"},{"name":"meiotic cell cycle in presence of nutrients","type":"exact"},{"name":"meiotic cell cycle without starvation","type":"exact"},{"name":"sporulation in presence of nutrients","type":"related"}],"termid":"FYPO:0006107"}


id: GO:0099550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}


id: PBO:0114344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS superfamily, UNC-93 subfamily, transmembrane transporter","termid":"PBO:0114344"}


id: PBO:0042688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CECR2 histone acetyl-lysine reader","termid":"PBO:0042688"}


id: PBO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 4","termid":"PBO:0060895"}


id: GO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:mtg_muscle","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation","termid":"GO:0006949"},{"relation_name":"is_a","term_name":"cell-cell fusion","termid":"GO:0140253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytium formation by plasma membrane fusion","synonyms":[{"name":"cell fusion","type":"broad"}],"termid":"GO:0000768"}


id: PBO:0029111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_phase","termid":"PBO:0029111"}


id: GO:0140523
data:
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id: GO:0061914
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id: PBO:0069140
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id: PBO:0069734
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id: PBO:0002925
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id: GO:0019061
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id: GO:1990410
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id: PBO:0041953
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id: GO:0008380
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id: PBO:0067517
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id: MOD:01539
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id: PBO:0052824
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id: MOD:00789
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id: GO:0032758
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id: PBO:0045221
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id: FYPO:0002197
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cell phenotype in which a cell is viable, and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":7,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D 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type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G 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id: GO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"novobiocin metabolic process","termid":"GO:0043641"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"novobiocin biosynthetic process","secondary_identifiers":["Wikipedia:Novobiocin"],"termid":"GO:0043642"}


id: GO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor recycling","termid":"GO:0001919"}


id: PATO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000425 continual (obsolete PATO:0000425)","termid":"PATO:0000425"}


id: FYPO:0002038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deadenylation-independent decapping of nuclear-transcribed mRNA is abnormal. This decapping process is cleavage of the 5'-cap of a nuclear-transcribed mRNA, independent of poly(A) tail shortening. All RNA decapping may be abnormal, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["GO:0031087","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002038"}


id: PBO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein Ima1","termid":"PBO:0005687"}


id: PBO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase","termid":"PBO:0012279"}


id: GO:0052124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis within host (obsolete GO:0052124)","termid":"GO:0052124"}


id: PBO:0056343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 2","termid":"PBO:0056343"}


id: PBO:0041275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 2","termid":"PBO:0041275"}


id: PBO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal small subunit Var1","termid":"PBO:0018213"}


id: PATO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000452 relative pilosity value (obsolete PATO:0000452)","termid":"PATO:0000452"}


id: PBO:0045345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 5","termid":"PBO:0045345"}


id: PBO:0056910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell immunoglobulin like receptor 1","termid":"PBO:0056910"}


id: GO:0061349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac right atrium.","definition_xrefs":["GOC:mtg_heart","PMID:19056682","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:0061349)","termid":"GO:0061349"}


id: PR:O59819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.10 gene.","definition_xrefs":["UniProtKB:O59819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP--glucose-1-phosphate uridylyltransferase-like protein Ugp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.10","synonyms":[{"name":"Spom972h-SPCC794.10","type":"exact"},{"name":"UDP-glucose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UDPGP (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UGPase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O59819"}


id: PBO:0053224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 4","termid":"PBO:0053224"}


id: PBO:0029267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029267"}


id: FYPO:0007797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan 1,3-alpha-glucosidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glucan 1,3-alpha-glucosidase activity","termid":"FYPO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased glucan 1,3-alpha-glucosidase activity","synonyms":[{"name":"reduced glucan 1,3-alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0007797"}


id: PR:Q09899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A porphobilinogen deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11557:SF0","OMA:SCHPO00086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphobilinogen deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.13","secondary_identifiers":["UniProtKB:Q09899"],"synonyms":[{"name":"HMBS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PBG (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HMBS","type":"exact"},{"name":"hydroxymethylbilane synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-uroporphyrinogen synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09899"}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: GO:0102909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD + 2-hydroxyglutarate = H+ + 2-oxoglutarate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ketoglutarate reductase activity (NADH-dependent) (obsolete GO:0102909)","termid":"GO:0102909"}


id: FYPO:0005447
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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